Clone Name | rbart36c01 |
---|---|
Clone Library Name | barley_pub |
>INV6_ORYSA (Q56UD0) Beta-fructofuranosidase, insoluble isoenzyme 6 precursor| (EC 3.2.1.26) (Sucrose hydrolase 6) (Invertase 6) (Cell wall beta-fructosidase 6) (OsCIN6) Length = 596 Score = 47.4 bits (111), Expect = 2e-05 Identities = 22/33 (66%), Positives = 27/33 (81%) Frame = -1 Query: 513 VFNNGTGAVKVSSLDAWEMATATVNVLPDGLIA 415 VFNN + AVKVS L+AWE+ATA+VN DGLI+ Sbjct: 553 VFNNASDAVKVSKLEAWELATASVNAGDDGLIS 585
>INV5_ORYSA (Q56UD1) Beta-fructofuranosidase, insoluble isoenzyme 5 (EC| 3.2.1.26) (Sucrose hydrolase 5) (Invertase 5) (Cell wall beta-fructosidase 5) (OsCIN5) (Fragment) Length = 526 Score = 45.4 bits (106), Expect = 9e-05 Identities = 20/25 (80%), Positives = 22/25 (88%) Frame = -1 Query: 513 VFNNGTGAVKVSSLDAWEMATATVN 439 VFNNG+G V VS L+AWEMATATVN Sbjct: 491 VFNNGSGTVNVSKLEAWEMATATVN 515
>INV7_ORYSA (Q56UC9) Beta-fructofuranosidase, insoluble isoenzyme 7 precursor| (EC 3.2.1.26) (Sucrose hydrolase 7) (Invertase 7) (Cell wall beta-fructosidase 7) (OsCIN7) Length = 596 Score = 44.7 bits (104), Expect = 2e-04 Identities = 19/27 (70%), Positives = 25/27 (92%) Frame = -1 Query: 513 VFNNGTGAVKVSSLDAWEMATATVNVL 433 VFNNG+ AVKV+ L+AW++ATATVNV+ Sbjct: 549 VFNNGSDAVKVAKLEAWDLATATVNVV 575
>INV3_ORYSA (Q56UD3) Beta-fructofuranosidase, insoluble isoenzyme 3 precursor| (EC 3.2.1.26) (Sucrose hydrolase 3) (Invertase 3) (Cell wall beta-fructosidase 3) (OsCIN3) Length = 586 Score = 37.0 bits (84), Expect = 0.032 Identities = 16/25 (64%), Positives = 19/25 (76%) Frame = -1 Query: 513 VFNNGTGAVKVSSLDAWEMATATVN 439 VFNNG VKV++LDAWEM T +N Sbjct: 559 VFNNGESDVKVTNLDAWEMKTPKMN 583
>INV4_ORYSA (Q5JJV0) Beta-fructofuranosidase, insoluble isoenzyme 4 precursor| (EC 3.2.1.26) (Sucrose hydrolase 4) (Invertase 4) (Cell wall beta-fructosidase 4) (OsCIN4) Length = 590 Score = 35.8 bits (81), Expect = 0.070 Identities = 16/25 (64%), Positives = 17/25 (68%) Frame = -1 Query: 510 FNNGTGAVKVSSLDAWEMATATVNV 436 FNNG+ VKVS L AW M A VNV Sbjct: 563 FNNGSSTVKVSQLKAWSMTRAQVNV 587
>INV2_DAUCA (Q39692) Beta-fructofuranosidase, insoluble isoenzyme 2 precursor| (EC 3.2.1.26) (Sucrose hydrolase 2) (Invertase 2) (Cell wall beta-fructosidase 2) Length = 592 Score = 33.1 bits (74), Expect = 0.46 Identities = 13/19 (68%), Positives = 15/19 (78%) Frame = -1 Query: 513 VFNNGTGAVKVSSLDAWEM 457 VFNNGT A+ + SLDAW M Sbjct: 565 VFNNGTEAITIDSLDAWSM 583
>INVB_DAUCA (P80065) Beta-fructofuranosidase, soluble isoenzyme I precursor (EC| 3.2.1.26) (Sucrose hydrolase) (Invertase) (Saccharase) Length = 661 Score = 32.7 bits (73), Expect = 0.60 Identities = 13/28 (46%), Positives = 19/28 (67%) Frame = -1 Query: 513 VFNNGTGAVKVSSLDAWEMATATVNVLP 430 +FNN TG +S+ AW+MA+AT+ P Sbjct: 630 LFNNATGVSVTASVKAWQMASATLKPFP 657
>INV1_ORYSA (Q6EU76) Beta-fructofuranosidase, insoluble isoenzyme 1 precursor| (EC 3.2.1.26) (Sucrose hydrolase 1) (Invertase 1) (Cell wall beta-fructosidase 1) (OsCIN1) Length = 577 Score = 31.6 bits (70), Expect = 1.3 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = -1 Query: 513 VFNNGTGAVKVSSLDAWEMATATVN 439 VFNNG +K+S L AWEM +N Sbjct: 551 VFNNGEADIKISHLKAWEMKKPLMN 575
>INV2_ORYSA (Q56UD4) Beta-fructofuranosidase, insoluble isoenzyme 2 precursor| (EC 3.2.1.26) (Sucrose hydrolase 2) (Invertase 2) (Cell wall beta-fructosidase 2) (OsCIN2) Length = 598 Score = 31.6 bits (70), Expect = 1.3 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -1 Query: 513 VFNNGTGAVKVSSLDAWEM 457 VFNNG +KVS L AWEM Sbjct: 571 VFNNGKAEIKVSQLTAWEM 589
>INV1_CAPAN (P93761) Acid beta-fructofuranosidase AIV-18 (EC 3.2.1.26) (Acid| sucrose hydrolase) (Acid invertase) Length = 640 Score = 31.2 bits (69), Expect = 1.7 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = -1 Query: 513 VFNNGTGAVKVSSLDAWEMATATVNVLP 430 VFNN TGA+ +SL W + +A + P Sbjct: 609 VFNNATGAIVTASLKIWSLESADIRSFP 636
>INV3_DAUCA (Q39693) Beta-fructofuranosidase, insoluble isoenzyme 3 precursor| (EC 3.2.1.26) (Sucrose hydrolase 3) (Invertase 3) (Cell wall beta-fructosidase 3) Length = 583 Score = 30.4 bits (67), Expect = 3.0 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = -1 Query: 513 VFNNGTGAVKVSSLDAWEM 457 VFNNGT + V +LDAW M Sbjct: 558 VFNNGTEPITVDNLDAWSM 576
>INVO_TARBA (P24711) Involucrin| Length = 387 Score = 30.0 bits (66), Expect = 3.9 Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 3/68 (4%) Frame = +1 Query: 292 PEPQLGRQIQSAVE--IHNGHPSTERKPSSRILIGLSSAHRARRDQPVGEHVH-GRRRHL 462 PE QLGR+ Q E +H G ++KP + AH ++ +P G+ VH G+++ Sbjct: 78 PELQLGRKQQEPQEQEVHPG--KQQQKPQEQ------EAHLGKKQEPQGQEVHLGKQQQK 129 Query: 463 PRVEAGHL 486 + + HL Sbjct: 130 TQEQEVHL 137
>INV1_DAUCA (P26792) Beta-fructofuranosidase, insoluble isoenzyme 1 precursor| (EC 3.2.1.26) (Sucrose hydrolase 1) (Invertase 1) (Cell wall beta-fructosidase 1) Length = 592 Score = 29.3 bits (64), Expect = 6.6 Identities = 11/19 (57%), Positives = 14/19 (73%) Frame = -1 Query: 513 VFNNGTGAVKVSSLDAWEM 457 VFNNG+ + V +LDAW M Sbjct: 567 VFNNGSETITVENLDAWSM 585
>SYV_STRCO (O06851) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 874 Score = 29.3 bits (64), Expect = 6.6 Identities = 11/34 (32%), Positives = 19/34 (55%) Frame = -1 Query: 303 LWLRCTNGGSLIVCQNSTEGGF*DAAKEKDCRNI 202 LW T G S+++ + T+ GF DA E++ + Sbjct: 699 LWTTLTGGESVVIAEWPTDSGFRDAGAEREIETV 732
>INVA_MAIZE (P49174) Beta-fructofuranosidase, cell wall isozyme precursor (EC| 3.2.1.26) (Sucrose hydrolase) (Invertase) Length = 590 Score = 29.3 bits (64), Expect = 6.6 Identities = 14/25 (56%), Positives = 15/25 (60%) Frame = -1 Query: 513 VFNNGTGAVKVSSLDAWEMATATVN 439 VFNNG V VS L AWEM +N Sbjct: 564 VFNNGEVDVTVSGLTAWEMKKPLMN 588
>MDTC_SHIFL (Q83KI4) Multidrug resistance protein mdtC (Multidrug transporter| mdtC) Length = 1021 Score = 28.9 bits (63), Expect = 8.6 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = -1 Query: 513 VFNNGTGAVKVSSLDAWEMATATVNVLPDGLIAASSVS 400 V NN A+ +S W+ A A ++V GL AAS++S Sbjct: 764 VINNEGKAIPLSYFAKWQPANAPLSVNHQGLSAASTIS 801
>ZAR1_XENLA (Q7T3U0) Zygote arrest 1 (Oocyte-specific maternal effect factor)| Length = 295 Score = 28.9 bits (63), Expect = 8.6 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%) Frame = -3 Query: 340 CEFLRPIGFACPIVAQVYKWRLPHCLPEQ-HRRRILGCCKGKRL 212 C+ + ACP+ +L H P++ HR+ + G CKGKRL Sbjct: 247 CQSCKQTRCACPV-------KLRHVDPKRPHRQDLCGRCKGKRL 283
>MDTC_ECOLI (P76399) Multidrug resistance protein mdtC (Multidrug transporter| mdtC) Length = 1025 Score = 28.9 bits (63), Expect = 8.6 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = -1 Query: 513 VFNNGTGAVKVSSLDAWEMATATVNVLPDGLIAASSVS 400 V NN A+ +S W+ A A ++V GL AAS++S Sbjct: 768 VINNEGKAIPLSYFAKWQPANAPLSVNHQGLSAASTIS 805
>MDTC_ECOL6 (Q8FG03) Multidrug resistance protein mdtC (Multidrug transporter| mdtC) Length = 1025 Score = 28.9 bits (63), Expect = 8.6 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = -1 Query: 513 VFNNGTGAVKVSSLDAWEMATATVNVLPDGLIAASSVS 400 V NN A+ +S W+ A A ++V GL AAS++S Sbjct: 768 VINNEGKAIPLSYFAKWQPANAPLSVNHQGLSAASTIS 805
>MDTC_ECO57 (Q7ACM1) Multidrug resistance protein mdtC (Multidrug transporter| mdtC) Length = 1025 Score = 28.9 bits (63), Expect = 8.6 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = -1 Query: 513 VFNNGTGAVKVSSLDAWEMATATVNVLPDGLIAASSVS 400 V NN A+ +S W+ A A ++V GL AAS++S Sbjct: 768 VINNEGKAIPLSYFAKWQPANAPLSVNHQGLSAASTIS 805 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 76,196,171 Number of Sequences: 219361 Number of extensions: 1699716 Number of successful extensions: 4363 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 4251 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4362 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3812186532 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)