ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart36c01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1INV6_ORYSA (Q56UD0) Beta-fructofuranosidase, insoluble isoenzyme... 47 2e-05
2INV5_ORYSA (Q56UD1) Beta-fructofuranosidase, insoluble isoenzyme... 45 9e-05
3INV7_ORYSA (Q56UC9) Beta-fructofuranosidase, insoluble isoenzyme... 45 2e-04
4INV3_ORYSA (Q56UD3) Beta-fructofuranosidase, insoluble isoenzyme... 37 0.032
5INV4_ORYSA (Q5JJV0) Beta-fructofuranosidase, insoluble isoenzyme... 36 0.070
6INV2_DAUCA (Q39692) Beta-fructofuranosidase, insoluble isoenzyme... 33 0.46
7INVB_DAUCA (P80065) Beta-fructofuranosidase, soluble isoenzyme I... 33 0.60
8INV1_ORYSA (Q6EU76) Beta-fructofuranosidase, insoluble isoenzyme... 32 1.3
9INV2_ORYSA (Q56UD4) Beta-fructofuranosidase, insoluble isoenzyme... 32 1.3
10INV1_CAPAN (P93761) Acid beta-fructofuranosidase AIV-18 (EC 3.2.... 31 1.7
11INV3_DAUCA (Q39693) Beta-fructofuranosidase, insoluble isoenzyme... 30 3.0
12INVO_TARBA (P24711) Involucrin 30 3.9
13INV1_DAUCA (P26792) Beta-fructofuranosidase, insoluble isoenzyme... 29 6.6
14SYV_STRCO (O06851) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--t... 29 6.6
15INVA_MAIZE (P49174) Beta-fructofuranosidase, cell wall isozyme p... 29 6.6
16MDTC_SHIFL (Q83KI4) Multidrug resistance protein mdtC (Multidrug... 29 8.6
17ZAR1_XENLA (Q7T3U0) Zygote arrest 1 (Oocyte-specific maternal ef... 29 8.6
18MDTC_ECOLI (P76399) Multidrug resistance protein mdtC (Multidrug... 29 8.6
19MDTC_ECOL6 (Q8FG03) Multidrug resistance protein mdtC (Multidrug... 29 8.6
20MDTC_ECO57 (Q7ACM1) Multidrug resistance protein mdtC (Multidrug... 29 8.6

>INV6_ORYSA (Q56UD0) Beta-fructofuranosidase, insoluble isoenzyme 6 precursor|
           (EC 3.2.1.26) (Sucrose hydrolase 6) (Invertase 6) (Cell
           wall beta-fructosidase 6) (OsCIN6)
          Length = 596

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 22/33 (66%), Positives = 27/33 (81%)
 Frame = -1

Query: 513 VFNNGTGAVKVSSLDAWEMATATVNVLPDGLIA 415
           VFNN + AVKVS L+AWE+ATA+VN   DGLI+
Sbjct: 553 VFNNASDAVKVSKLEAWELATASVNAGDDGLIS 585



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>INV5_ORYSA (Q56UD1) Beta-fructofuranosidase, insoluble isoenzyme 5 (EC|
           3.2.1.26) (Sucrose hydrolase 5) (Invertase 5) (Cell wall
           beta-fructosidase 5) (OsCIN5) (Fragment)
          Length = 526

 Score = 45.4 bits (106), Expect = 9e-05
 Identities = 20/25 (80%), Positives = 22/25 (88%)
 Frame = -1

Query: 513 VFNNGTGAVKVSSLDAWEMATATVN 439
           VFNNG+G V VS L+AWEMATATVN
Sbjct: 491 VFNNGSGTVNVSKLEAWEMATATVN 515



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>INV7_ORYSA (Q56UC9) Beta-fructofuranosidase, insoluble isoenzyme 7 precursor|
           (EC 3.2.1.26) (Sucrose hydrolase 7) (Invertase 7) (Cell
           wall beta-fructosidase 7) (OsCIN7)
          Length = 596

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 19/27 (70%), Positives = 25/27 (92%)
 Frame = -1

Query: 513 VFNNGTGAVKVSSLDAWEMATATVNVL 433
           VFNNG+ AVKV+ L+AW++ATATVNV+
Sbjct: 549 VFNNGSDAVKVAKLEAWDLATATVNVV 575



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>INV3_ORYSA (Q56UD3) Beta-fructofuranosidase, insoluble isoenzyme 3 precursor|
           (EC 3.2.1.26) (Sucrose hydrolase 3) (Invertase 3) (Cell
           wall beta-fructosidase 3) (OsCIN3)
          Length = 586

 Score = 37.0 bits (84), Expect = 0.032
 Identities = 16/25 (64%), Positives = 19/25 (76%)
 Frame = -1

Query: 513 VFNNGTGAVKVSSLDAWEMATATVN 439
           VFNNG   VKV++LDAWEM T  +N
Sbjct: 559 VFNNGESDVKVTNLDAWEMKTPKMN 583



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>INV4_ORYSA (Q5JJV0) Beta-fructofuranosidase, insoluble isoenzyme 4 precursor|
           (EC 3.2.1.26) (Sucrose hydrolase 4) (Invertase 4) (Cell
           wall beta-fructosidase 4) (OsCIN4)
          Length = 590

 Score = 35.8 bits (81), Expect = 0.070
 Identities = 16/25 (64%), Positives = 17/25 (68%)
 Frame = -1

Query: 510 FNNGTGAVKVSSLDAWEMATATVNV 436
           FNNG+  VKVS L AW M  A VNV
Sbjct: 563 FNNGSSTVKVSQLKAWSMTRAQVNV 587



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>INV2_DAUCA (Q39692) Beta-fructofuranosidase, insoluble isoenzyme 2 precursor|
           (EC 3.2.1.26) (Sucrose hydrolase 2) (Invertase 2) (Cell
           wall beta-fructosidase 2)
          Length = 592

 Score = 33.1 bits (74), Expect = 0.46
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = -1

Query: 513 VFNNGTGAVKVSSLDAWEM 457
           VFNNGT A+ + SLDAW M
Sbjct: 565 VFNNGTEAITIDSLDAWSM 583



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>INVB_DAUCA (P80065) Beta-fructofuranosidase, soluble isoenzyme I precursor (EC|
           3.2.1.26) (Sucrose hydrolase) (Invertase) (Saccharase)
          Length = 661

 Score = 32.7 bits (73), Expect = 0.60
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -1

Query: 513 VFNNGTGAVKVSSLDAWEMATATVNVLP 430
           +FNN TG    +S+ AW+MA+AT+   P
Sbjct: 630 LFNNATGVSVTASVKAWQMASATLKPFP 657



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>INV1_ORYSA (Q6EU76) Beta-fructofuranosidase, insoluble isoenzyme 1 precursor|
           (EC 3.2.1.26) (Sucrose hydrolase 1) (Invertase 1) (Cell
           wall beta-fructosidase 1) (OsCIN1)
          Length = 577

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -1

Query: 513 VFNNGTGAVKVSSLDAWEMATATVN 439
           VFNNG   +K+S L AWEM    +N
Sbjct: 551 VFNNGEADIKISHLKAWEMKKPLMN 575



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>INV2_ORYSA (Q56UD4) Beta-fructofuranosidase, insoluble isoenzyme 2 precursor|
           (EC 3.2.1.26) (Sucrose hydrolase 2) (Invertase 2) (Cell
           wall beta-fructosidase 2) (OsCIN2)
          Length = 598

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 13/19 (68%), Positives = 14/19 (73%)
 Frame = -1

Query: 513 VFNNGTGAVKVSSLDAWEM 457
           VFNNG   +KVS L AWEM
Sbjct: 571 VFNNGKAEIKVSQLTAWEM 589



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>INV1_CAPAN (P93761) Acid beta-fructofuranosidase AIV-18 (EC 3.2.1.26) (Acid|
           sucrose hydrolase) (Acid invertase)
          Length = 640

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -1

Query: 513 VFNNGTGAVKVSSLDAWEMATATVNVLP 430
           VFNN TGA+  +SL  W + +A +   P
Sbjct: 609 VFNNATGAIVTASLKIWSLESADIRSFP 636



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>INV3_DAUCA (Q39693) Beta-fructofuranosidase, insoluble isoenzyme 3 precursor|
           (EC 3.2.1.26) (Sucrose hydrolase 3) (Invertase 3) (Cell
           wall beta-fructosidase 3)
          Length = 583

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -1

Query: 513 VFNNGTGAVKVSSLDAWEM 457
           VFNNGT  + V +LDAW M
Sbjct: 558 VFNNGTEPITVDNLDAWSM 576



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>INVO_TARBA (P24711) Involucrin|
          Length = 387

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
 Frame = +1

Query: 292 PEPQLGRQIQSAVE--IHNGHPSTERKPSSRILIGLSSAHRARRDQPVGEHVH-GRRRHL 462
           PE QLGR+ Q   E  +H G    ++KP  +       AH  ++ +P G+ VH G+++  
Sbjct: 78  PELQLGRKQQEPQEQEVHPG--KQQQKPQEQ------EAHLGKKQEPQGQEVHLGKQQQK 129

Query: 463 PRVEAGHL 486
            + +  HL
Sbjct: 130 TQEQEVHL 137



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>INV1_DAUCA (P26792) Beta-fructofuranosidase, insoluble isoenzyme 1 precursor|
           (EC 3.2.1.26) (Sucrose hydrolase 1) (Invertase 1) (Cell
           wall beta-fructosidase 1)
          Length = 592

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -1

Query: 513 VFNNGTGAVKVSSLDAWEM 457
           VFNNG+  + V +LDAW M
Sbjct: 567 VFNNGSETITVENLDAWSM 585



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>SYV_STRCO (O06851) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS)
          Length = 874

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -1

Query: 303 LWLRCTNGGSLIVCQNSTEGGF*DAAKEKDCRNI 202
           LW   T G S+++ +  T+ GF DA  E++   +
Sbjct: 699 LWTTLTGGESVVIAEWPTDSGFRDAGAEREIETV 732



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>INVA_MAIZE (P49174) Beta-fructofuranosidase, cell wall isozyme precursor (EC|
           3.2.1.26) (Sucrose hydrolase) (Invertase)
          Length = 590

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 14/25 (56%), Positives = 15/25 (60%)
 Frame = -1

Query: 513 VFNNGTGAVKVSSLDAWEMATATVN 439
           VFNNG   V VS L AWEM    +N
Sbjct: 564 VFNNGEVDVTVSGLTAWEMKKPLMN 588



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>MDTC_SHIFL (Q83KI4) Multidrug resistance protein mdtC (Multidrug transporter|
           mdtC)
          Length = 1021

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = -1

Query: 513 VFNNGTGAVKVSSLDAWEMATATVNVLPDGLIAASSVS 400
           V NN   A+ +S    W+ A A ++V   GL AAS++S
Sbjct: 764 VINNEGKAIPLSYFAKWQPANAPLSVNHQGLSAASTIS 801



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>ZAR1_XENLA (Q7T3U0) Zygote arrest 1 (Oocyte-specific maternal effect factor)|
          Length = 295

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = -3

Query: 340 CEFLRPIGFACPIVAQVYKWRLPHCLPEQ-HRRRILGCCKGKRL 212
           C+  +    ACP+       +L H  P++ HR+ + G CKGKRL
Sbjct: 247 CQSCKQTRCACPV-------KLRHVDPKRPHRQDLCGRCKGKRL 283



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>MDTC_ECOLI (P76399) Multidrug resistance protein mdtC (Multidrug transporter|
           mdtC)
          Length = 1025

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = -1

Query: 513 VFNNGTGAVKVSSLDAWEMATATVNVLPDGLIAASSVS 400
           V NN   A+ +S    W+ A A ++V   GL AAS++S
Sbjct: 768 VINNEGKAIPLSYFAKWQPANAPLSVNHQGLSAASTIS 805



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>MDTC_ECOL6 (Q8FG03) Multidrug resistance protein mdtC (Multidrug transporter|
           mdtC)
          Length = 1025

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = -1

Query: 513 VFNNGTGAVKVSSLDAWEMATATVNVLPDGLIAASSVS 400
           V NN   A+ +S    W+ A A ++V   GL AAS++S
Sbjct: 768 VINNEGKAIPLSYFAKWQPANAPLSVNHQGLSAASTIS 805



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>MDTC_ECO57 (Q7ACM1) Multidrug resistance protein mdtC (Multidrug transporter|
           mdtC)
          Length = 1025

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = -1

Query: 513 VFNNGTGAVKVSSLDAWEMATATVNVLPDGLIAASSVS 400
           V NN   A+ +S    W+ A A ++V   GL AAS++S
Sbjct: 768 VINNEGKAIPLSYFAKWQPANAPLSVNHQGLSAASTIS 805


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,196,171
Number of Sequences: 219361
Number of extensions: 1699716
Number of successful extensions: 4363
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 4251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4362
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3812186532
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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