Clone Name | rbart36b09 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | TNR16_CHICK (P18519) Tumor necrosis factor receptor superfamily ... | 28 | 4.9 | 2 | PEPX_LACDL (P40334) Xaa-Pro dipeptidyl-peptidase (EC 3.4.14.11) ... | 28 | 8.4 | 3 | PEPX_LACDE (Q9Z5K9) Xaa-Pro dipeptidyl-peptidase (EC 3.4.14.11) ... | 28 | 8.4 |
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>TNR16_CHICK (P18519) Tumor necrosis factor receptor superfamily member 16| precursor (Low-affinity nerve growth factor receptor) (NGF receptor) (Gp80-LNGFR) (p75 ICD) (Low affinity neurotrophin receptor p75NTR) Length = 416 Score = 28.5 bits (62), Expect = 4.9 Identities = 13/37 (35%), Positives = 17/37 (45%) Frame = +2 Query: 101 SNGECSPLQIAWTNHRPILLGS*CPASVATGLASSRG 211 S+ EC L WT H P L GS P + ++ G Sbjct: 176 SDAECRDLHPRWTTHTPSLAGSDSPEPITRDPFNTEG 212
>PEPX_LACDL (P40334) Xaa-Pro dipeptidyl-peptidase (EC 3.4.14.11) (X-Pro| dipeptidyl-peptidase) (X-prolyl-dipeptidyl aminopeptidase) (X-PDAP) Length = 792 Score = 27.7 bits (60), Expect = 8.4 Identities = 10/25 (40%), Positives = 16/25 (64%) Frame = -2 Query: 153 MGLWFVHAICKGEHSPLEQFSSIML 79 M LWFVH + + E+ EQ+ +M+ Sbjct: 528 MNLWFVHELLEVENGAYEQWPKVMI 552
>PEPX_LACDE (Q9Z5K9) Xaa-Pro dipeptidyl-peptidase (EC 3.4.14.11) (X-Pro| dipeptidyl-peptidase) (X-prolyl-dipeptidyl aminopeptidase) (X-PDAP) (Fragment) Length = 786 Score = 27.7 bits (60), Expect = 8.4 Identities = 10/25 (40%), Positives = 16/25 (64%) Frame = -2 Query: 153 MGLWFVHAICKGEHSPLEQFSSIML 79 M LWFVH + + E+ EQ+ +M+ Sbjct: 522 MNLWFVHELLEVENGAYEQWPKVMI 546 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 32,623,121 Number of Sequences: 219361 Number of extensions: 534894 Number of successful extensions: 1046 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1022 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1046 length of database: 80,573,946 effective HSP length: 49 effective length of database: 69,825,257 effective search space used: 1675806168 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)