ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart36b05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_192570.1| Oryza sativa (japonica cultivar-group), predic... 123 6e-25
2gb|AC136216.2| Oryza sativa (japonica cultivar-group) chromosome... 105 1e-19
3gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome... 105 1e-19
4dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 105 1e-19
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 101 2e-18
6dbj|AP003243.3| Oryza sativa (japonica cultivar-group) genomic D... 101 2e-18
7gb|AY110909.1| Zea mays CL6503_1 mRNA sequence 66 1e-07
8gb|AY108841.1| Zea mays PCO125396 mRNA sequence 66 1e-07
9emb|BX323873.9| Zebrafish DNA sequence from clone CH211-133L21 i... 44 0.46
10gb|CP000013.1| Borrelia garinii PBi, complete genome 42 1.8
11gb|AC112953.15| Mus musculus chromosome 7, clone RP23-44J21, com... 42 1.8
12gb|AC111142.16| Mus musculus chromosome 3, clone RP23-370L24, co... 42 1.8
13gb|AC084383.1| Mus musculus BAC clone RP23-10B20 from 17, comple... 42 1.8
14gb|AC161350.3| Mus musculus chromosome 3, clone RP24-356H12, com... 42 1.8
15emb|BX511310.13| Zebrafish DNA sequence from clone DKEY-274M14 i... 42 1.8
16gb|AY657937.1| Synthetic construct Peudomonas aeruginosa clone F... 40 7.1
17gb|AY357326.1| Littorina sitkana isolate si12Sarita putative ami... 40 7.1
18gb|AY357325.1| Littorina sitkana isolate si11Sarita putative ami... 40 7.1
19gb|AY357324.1| Littorina sitkana isolate si183Prasiola putative ... 40 7.1
20gb|AY357323.1| Littorina sitkana isolate si50Prasiola putative a... 40 7.1
21gb|AY357322.1| Littorina sitkana isolate si9Kirby putative amino... 40 7.1
22gb|AY357313.1| Littorina saxatilis isolate sax407 putative amino... 40 7.1
23gb|AY357312.1| Littorina saxatilis isolate 405sax putative amino... 40 7.1
24gb|AY357311.1| Littorina saxatilis isolate sax6NSea putative ami... 40 7.1
25gb|AY357310.1| Littorina saxatilis isolate sax410 putative amino... 40 7.1
26gb|AY357309.1| Littorina obtusata isolate obt11 putative aminope... 40 7.1
27gb|AY357308.1| Littorina plena isolate Plen23 putative aminopept... 40 7.1
28gb|AY357303.1| Littorina sitkana isolate sit1 putative aminopept... 40 7.1
29gb|AC121119.12| Mus musculus chromosome 1, clone RP23-395D10, co... 40 7.1
30gb|AC110517.9| Mus musculus chromosome 17, clone RP23-13F15, com... 40 7.1
31emb|AL592157.4| Human DNA sequence from clone RP11-392M9 on chro... 40 7.1
32emb|AL139332.8| Human DNA sequence from clone RP11-380L24 on chr... 40 7.1
33gb|AC158170.2| Mus musculus BAC clone RP23-261K17 from chromosom... 40 7.1
34gb|AC092804.2| Homo sapiens chromosome 1 clone RP11-81E23, compl... 40 7.1
35gb|AC154782.2| Mus musculus BAC clone RP24-464A14 from chromosom... 40 7.1
36gb|AE004817.1| Pseudomonas aeruginosa PAO1, section 378 of 529 o... 40 7.1
37gb|AE000783.1| Borrelia burgdorferi B31, complete genome 40 7.1
38gb|AC154006.3| Mus musculus 6 BAC RP24-314D8 (Roswell Park Cance... 40 7.1
39emb|BX897729.6| Zebrafish DNA sequence from clone DKEY-240A12 in... 40 7.1
40emb|CT010479.25| Mouse DNA sequence from clone RP23-233G23 on ch... 40 7.1
41emb|Z11855.1|SS17AHCP2 S.scrofa gene for 17a-hydroxylase cytochr... 40 7.1
42dbj|AP003079.3| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 7.1
43gb|AC174777.2| Mus musculus BAC clone RP23-284K12 from chromosom... 40 7.1
44emb|BX000472.8| Zebrafish DNA sequence from clone DKEY-77H17, co... 40 7.1
45gb|AY749964.1| Mirawara sp. EP093 clone 2 28S ribosomal RNA gene... 40 7.1 
>ref|NM_192570.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 615

 Score =  123 bits (62), Expect = 6e-25
 Identities = 155/186 (83%)
 Strand = Plus / Minus

                                                                       
Query: 217 ctactggattacgcactcgcatttcttgaagccatcattctccccctcatcgtccgacaa 276
           |||||| || || ||||| |||||| |||| || ||||| |||   |||||||| |||||
Sbjct: 615 ctactgaatcacacactcacatttcctgaaaccctcattttccgtatcatcgtctgacaa 556

                                                                       
Query: 277 accttcgtcgcttgtttcaaattctctgatctcaaaaagttctttcccacacgtgtcagt 336
           |||||| || || | ||||||||| || ||||||||||| ||||| |||||||| |||||
Sbjct: 555 accttcatcactagcttcaaattcccttatctcaaaaagctcttttccacacgtatcagt 496

                                                                       
Query: 337 ccagtgaactttcctccgttccataccagttttcaaggtttgcacctcctcgagagactc 396
           ||| |||||||| || |||||||| |||| |||||||||||| ||||| || || |||||
Sbjct: 495 ccattgaacttttcttcgttccatgccagatttcaaggtttggacctcttccagtgactc 436

                 
Query: 397 gcgtgg 402
            |||||
Sbjct: 435 tcgtgg 430
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>gb|AC136216.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0022J22,
              complete sequence
          Length = 142854

 Score =  105 bits (53), Expect = 1e-19
 Identities = 80/89 (89%)
 Strand = Plus / Plus

                                                                          
Query: 290    gtttcaaattctctgatctcaaaaagttctttcccacacgtgtcagtccagtgaactttc 349
              |||||||||||||||||||| |||||||| ||||  || |||| ||||||||||||||| 
Sbjct: 121074 gtttcaaattctctgatctcgaaaagttccttccggcaagtgttagtccagtgaactttt 121133

                                           
Query: 350    ctccgttccataccagttttcaaggtttg 378
              |||||||||||||||| |||||| |||||
Sbjct: 121134 ctccgttccataccagctttcaatgtttg 121162
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>gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0663C08,
             complete sequence
          Length = 142196

 Score =  105 bits (53), Expect = 1e-19
 Identities = 80/89 (89%)
 Strand = Plus / Plus

                                                                         
Query: 290   gtttcaaattctctgatctcaaaaagttctttcccacacgtgtcagtccagtgaactttc 349
             |||||||||||||||||||| |||||||| ||||  || |||| ||||||||||||||| 
Sbjct: 16272 gtttcaaattctctgatctcgaaaagttccttccggcaagtgttagtccagtgaactttt 16331

                                          
Query: 350   ctccgttccataccagttttcaaggtttg 378
             |||||||||||||||| |||||| |||||
Sbjct: 16332 ctccgttccataccagctttcaatgtttg 16360
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  105 bits (53), Expect = 1e-19
 Identities = 80/89 (89%)
 Strand = Plus / Plus

                                                                            
Query: 290      gtttcaaattctctgatctcaaaaagttctttcccacacgtgtcagtccagtgaactttc 349
                |||||||||||||||||||| |||||||| ||||  || |||| ||||||||||||||| 
Sbjct: 29237615 gtttcaaattctctgatctcgaaaagttccttccggcaagtgttagtccagtgaactttt 29237674

                                             
Query: 350      ctccgttccataccagttttcaaggtttg 378
                |||||||||||||||| |||||| |||||
Sbjct: 29237675 ctccgttccataccagctttcaatgtttg 29237703
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  101 bits (51), Expect = 2e-18
 Identities = 96/111 (86%)
 Strand = Plus / Minus

                                                                            
Query: 292      ttcaaattctctgatctcaaaaagttctttcccacacgtgtcagtccagtgaactttcct 351
                ||||||||| || ||||||||||| ||||| |||||||| |||||||| |||||||| ||
Sbjct: 22997678 ttcaaattcccttatctcaaaaagctcttttccacacgtatcagtccattgaacttttct 22997619

                                                                   
Query: 352      ccgttccataccagttttcaaggtttgcacctcctcgagagactcgcgtgg 402
                 |||||||| |||| |||||||||||| ||||| || || ||||| |||||
Sbjct: 22997618 tcgttccatgccagatttcaaggtttggacctcttccagtgactctcgtgg 22997568
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>dbj|AP003243.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0415C01
          Length = 138701

 Score =  101 bits (51), Expect = 2e-18
 Identities = 96/111 (86%)
 Strand = Plus / Minus

                                                                         
Query: 292   ttcaaattctctgatctcaaaaagttctttcccacacgtgtcagtccagtgaactttcct 351
             ||||||||| || ||||||||||| ||||| |||||||| |||||||| |||||||| ||
Sbjct: 68084 ttcaaattcccttatctcaaaaagctcttttccacacgtatcagtccattgaacttttct 68025

                                                                
Query: 352   ccgttccataccagttttcaaggtttgcacctcctcgagagactcgcgtgg 402
              |||||||| |||| |||||||||||| ||||| || || ||||| |||||
Sbjct: 68024 tcgttccatgccagatttcaaggtttggacctcttccagtgactctcgtgg 67974
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>gb|AY110909.1| Zea mays CL6503_1 mRNA sequence
          Length = 712

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 100/124 (80%)
 Strand = Plus / Plus

                                                                       
Query: 281 tcgtcgcttgtttcaaattctctgatctcaaaaagttctttcccacacgtgtcagtccag 340
           ||||||||||||||||| || || |||||     | || || ||||| || || ||||| 
Sbjct: 289 tcgtcgcttgtttcaaactcccttatctcnnnnngctcctttccacatgtatctgtccac 348

                                                                       
Query: 341 tgaactttcctccgttccataccagttttcaaggtttgcacctcctcgagagactcgcgt 400
           ||||||||||||||||| || | || | ||||||| |||||||| || | ||||||||||
Sbjct: 349 tgaactttcctccgttctatgctagatctcaaggtctgcacctcttccacagactcgcgt 408

               
Query: 401 ggtt 404
           ||||
Sbjct: 409 ggtt 412



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 446 tcccttttcgagttactcttaagacagcc 474
           |||||||| ||||| ||||||||||||||
Sbjct: 451 tcccttttggagttgctcttaagacagcc 479
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>gb|AY108841.1| Zea mays PCO125396 mRNA sequence
          Length = 667

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 69/81 (85%)
 Strand = Plus / Minus

                                                                       
Query: 287 cttgtttcaaattctctgatctcaaaaagttctttcccacacgtgtcagtccagtgaact 346
           ||||| ||||| || || ||||||||||| || || ||||| || || ||||| ||||||
Sbjct: 115 cttgtctcaaactcccttatctcaaaaagatcctttccacatgtatctgtccactgaact 56

                                
Query: 347 ttcctccgttccataccagtt 367
           |||||||||||||||| ||||
Sbjct: 55  ttcctccgttccatactagtt 35
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>emb|BX323873.9| Zebrafish DNA sequence from clone CH211-133L21 in linkage group 19,
             complete sequence
          Length = 186708

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 37    cagtgatgattaagaaaaagac 58
             ||||||||||||||||||||||
Sbjct: 14262 cagtgatgattaagaaaaagac 14283
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>gb|CP000013.1| Borrelia garinii PBi, complete genome
          Length = 904246

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 142    tggagattaaagataaaaagt 162
              |||||||||||||||||||||
Sbjct: 854187 tggagattaaagataaaaagt 854207
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>gb|AC112953.15| Mus musculus chromosome 7, clone RP23-44J21, complete sequence
          Length = 205513

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 20    aacaaaacaaaaagttacagt 40
             |||||||||||||||||||||
Sbjct: 44947 aacaaaacaaaaagttacagt 44927
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>gb|AC111142.16| Mus musculus chromosome 3, clone RP23-370L24, complete sequence
          Length = 171774

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 4      acaaatatatatcagcaacaaaacaaaaa 32
              ||||||||| || ||||||||||||||||
Sbjct: 110251 acaaatataaattagcaacaaaacaaaaa 110223
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>gb|AC084383.1| Mus musculus BAC clone RP23-10B20 from 17, complete sequence
          Length = 203589

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 14    atcagcaacaaaacaaaaagt 34
             |||||||||||||||||||||
Sbjct: 15409 atcagcaacaaaacaaaaagt 15389
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>gb|AC161350.3| Mus musculus chromosome 3, clone RP24-356H12, complete sequence
          Length = 156180

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 4   acaaatatatatcagcaacaaaacaaaaa 32
           ||||||||| || ||||||||||||||||
Sbjct: 744 acaaatataaattagcaacaaaacaaaaa 772
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>emb|BX511310.13| Zebrafish DNA sequence from clone DKEY-274M14 in linkage group 23,
             complete sequence
          Length = 169760

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 291   tttcaaattctctgatctcaa 311
             |||||||||||||||||||||
Sbjct: 68392 tttcaaattctctgatctcaa 68412
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>gb|AY657937.1| Synthetic construct Peudomonas aeruginosa clone FLH045934.01F
           PA3991 gene, partial cds
          Length = 528

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 492 tgatggaggaaccattggct 511
           ||||||||||||||||||||
Sbjct: 465 tgatggaggaaccattggct 484
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>gb|AY357326.1| Littorina sitkana isolate si12Sarita putative aminopeptidase N
           gene, partial cds
          Length = 598

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 21  acaaaacaaaaagttacagt 40
           ||||||||||||||||||||
Sbjct: 472 acaaaacaaaaagttacagt 453
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>gb|AY357325.1| Littorina sitkana isolate si11Sarita putative aminopeptidase N
           gene, partial cds
          Length = 600

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 21  acaaaacaaaaagttacagt 40
           ||||||||||||||||||||
Sbjct: 473 acaaaacaaaaagttacagt 454
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>gb|AY357324.1| Littorina sitkana isolate si183Prasiola putative aminopeptidase N
           gene, partial cds
          Length = 544

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 21  acaaaacaaaaagttacagt 40
           ||||||||||||||||||||
Sbjct: 419 acaaaacaaaaagttacagt 400
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>gb|AY357323.1| Littorina sitkana isolate si50Prasiola putative aminopeptidase N
           gene, partial cds
          Length = 552

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 21  acaaaacaaaaagttacagt 40
           ||||||||||||||||||||
Sbjct: 430 acaaaacaaaaagttacagt 411
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>gb|AY357322.1| Littorina sitkana isolate si9Kirby putative aminopeptidase N gene,
           partial cds
          Length = 555

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 21  acaaaacaaaaagttacagt 40
           ||||||||||||||||||||
Sbjct: 430 acaaaacaaaaagttacagt 411
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>gb|AY357313.1| Littorina saxatilis isolate sax407 putative aminopeptidase N gene,
           partial cds
          Length = 914

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 21  acaaaacaaaaagttacagt 40
           ||||||||||||||||||||
Sbjct: 796 acaaaacaaaaagttacagt 777
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>gb|AY357312.1| Littorina saxatilis isolate 405sax putative aminopeptidase N gene,
           partial cds
          Length = 606

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 21  acaaaacaaaaagttacagt 40
           ||||||||||||||||||||
Sbjct: 475 acaaaacaaaaagttacagt 456
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>gb|AY357311.1| Littorina saxatilis isolate sax6NSea putative aminopeptidase N
           gene, partial cds
          Length = 607

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 21  acaaaacaaaaagttacagt 40
           ||||||||||||||||||||
Sbjct: 476 acaaaacaaaaagttacagt 457
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>gb|AY357310.1| Littorina saxatilis isolate sax410 putative aminopeptidase N gene,
           partial cds
          Length = 627

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 21  acaaaacaaaaagttacagt 40
           ||||||||||||||||||||
Sbjct: 496 acaaaacaaaaagttacagt 477
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>gb|AY357309.1| Littorina obtusata isolate obt11 putative aminopeptidase N gene,
           partial cds
          Length = 606

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 21  acaaaacaaaaagttacagt 40
           ||||||||||||||||||||
Sbjct: 475 acaaaacaaaaagttacagt 456
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>gb|AY357308.1| Littorina plena isolate Plen23 putative aminopeptidase N gene,
           partial cds
          Length = 764

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 21  acaaaacaaaaagttacagt 40
           ||||||||||||||||||||
Sbjct: 483 acaaaacaaaaagttacagt 464
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>gb|AY357303.1| Littorina sitkana isolate sit1 putative aminopeptidase N gene,
           partial cds
          Length = 606

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 21  acaaaacaaaaagttacagt 40
           ||||||||||||||||||||
Sbjct: 473 acaaaacaaaaagttacagt 454
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>gb|AC121119.12| Mus musculus chromosome 1, clone RP23-395D10, complete sequence
          Length = 221436

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 30     aaagttacagtgatgattaa 49
              ||||||||||||||||||||
Sbjct: 180227 aaagttacagtgatgattaa 180208
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>gb|AC110517.9| Mus musculus chromosome 17, clone RP23-13F15, complete sequence
          Length = 218657

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 72     gggagagaacaaaaattggg 91
              ||||||||||||||||||||
Sbjct: 196086 gggagagaacaaaaattggg 196067
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>emb|AL592157.4| Human DNA sequence from clone RP11-392M9 on chromosome X Contains part
             of the DIAPH2 gene for diaphanous (Drosophila, homolog) 2
             and a NADH dehydrogenase pseudogene, complete sequence
          Length = 86487

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 17    agcaacaaaacaaaaagtta 36
             ||||||||||||||||||||
Sbjct: 69646 agcaacaaaacaaaaagtta 69627
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>emb|AL139332.8| Human DNA sequence from clone RP11-380L24 on chromosome 6 Contains a
             CpG island, complete sequence
          Length = 76252

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 248   ccatcattctccccctcatc 267
             ||||||||||||||||||||
Sbjct: 54898 ccatcattctccccctcatc 54917
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>gb|AC158170.2| Mus musculus BAC clone RP23-261K17 from chromosome 16, complete
             sequence
          Length = 176422

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 173   tcaactatgacaaaaatgtg 192
             ||||||||||||||||||||
Sbjct: 55698 tcaactatgacaaaaatgtg 55717
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>gb|AC092804.2| Homo sapiens chromosome 1 clone RP11-81E23, complete sequence
          Length = 161398

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 356   tccataccagttttcaaggt 375
             ||||||||||||||||||||
Sbjct: 65281 tccataccagttttcaaggt 65300
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>gb|AC154782.2| Mus musculus BAC clone RP24-464A14 from chromosome 16, complete
             sequence
          Length = 144048

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 38    agtgatgattaagaaaaaga 57
             ||||||||||||||||||||
Sbjct: 95309 agtgatgattaagaaaaaga 95290
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>gb|AE004817.1| Pseudomonas aeruginosa PAO1, section 378 of 529 of the complete
           genome
          Length = 16964

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 492 tgatggaggaaccattggct 511
           ||||||||||||||||||||
Sbjct: 408 tgatggaggaaccattggct 389
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>gb|AE000783.1| Borrelia burgdorferi B31, complete genome
          Length = 910724

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 142    tggagattaaagataaaaag 161
              ||||||||||||||||||||
Sbjct: 852300 tggagattaaagataaaaag 852319
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>gb|AC154006.3| Mus musculus 6 BAC RP24-314D8 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 151766

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 20    aacaaaacaaaaagttacag 39
             ||||||||||||||||||||
Sbjct: 55424 aacaaaacaaaaagttacag 55405
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>emb|BX897729.6| Zebrafish DNA sequence from clone DKEY-240A12 in linkage group 4,
             complete sequence
          Length = 201932

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 288   ttgtttcaaattctctgatctcaa 311
             |||||||||||||| |||||||||
Sbjct: 74614 ttgtttcaaattctttgatctcaa 74637
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>emb|CT010479.25| Mouse DNA sequence from clone RP23-233G23 on chromosome 17, complete
             sequence
          Length = 203311

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 72    gggagagaacaaaaattggg 91
             ||||||||||||||||||||
Sbjct: 40654 gggagagaacaaaaattggg 40635
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>emb|Z11855.1|SS17AHCP2 S.scrofa gene for 17a-hydroxylase cytochrome P450, exons 2-5
          Length = 1858

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 507 tggctgttcctttcctgctt 526
           ||||||||||||||||||||
Sbjct: 44  tggctgttcctttcctgctt 63
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>dbj|AP003079.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-141E21, complete
             sequence
          Length = 166045

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 52    aaaagaccaacatagccatt 71
             ||||||||||||||||||||
Sbjct: 33047 aaaagaccaacatagccatt 33028
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>gb|AC174777.2| Mus musculus BAC clone RP23-284K12 from chromosome 16, complete
             sequence
          Length = 210964

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 173   tcaactatgacaaaaatgtg 192
             ||||||||||||||||||||
Sbjct: 26624 tcaactatgacaaaaatgtg 26605
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>emb|BX000472.8| Zebrafish DNA sequence from clone DKEY-77H17, complete sequence
          Length = 172174

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 8     atatatatcagcaacaaaac 27
             ||||||||||||||||||||
Sbjct: 32672 atatatatcagcaacaaaac 32653
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>gb|AY749964.1| Mirawara sp. EP093 clone 2 28S ribosomal RNA gene, partial sequence
          Length = 2033

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 475  ttttttcccgcttccgttga 494
            ||||||||||||||||||||
Sbjct: 1061 ttttttcccgcttccgttga 1042


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,989,045
Number of Sequences: 3902068
Number of extensions: 5989045
Number of successful extensions: 118912
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 118753
Number of HSP's gapped (non-prelim): 159
length of query: 528
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 505
effective length of database: 17,143,297,704
effective search space: 8657365340520
effective search space used: 8657365340520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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