>UBP30_HUMAN (Q70CQ3) Ubiquitin carboxyl-terminal hydrolase 30 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 30)
           (Ubiquitin-specific-processing protease 30)
           (Deubiquitinating enzyme 30)
          Length = 517

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 10/38 (26%), Positives = 19/38 (50%)
 Frame = -2

Query: 219 LVQCLCMHVSERERGHHGSPFSLFSYYSWSPLMLSNYY 106
           L QCLC+H+       HG+P     +  ++  ++ + Y
Sbjct: 317 LPQCLCIHLQRLSWSSHGTPLKRHEHVQFNEFLMMDIY 354

>SMYD4_PONPY (Q5R5X9) SET and MYND domain-containing protein 4|
          Length = 804

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 310 YCHRCIKLLAGVLSCSGC 363
           YCHRC+K     + C GC
Sbjct: 295 YCHRCLKHTLATVPCDGC 312

>SMYD4_HUMAN (Q8IYR2) SET and MYND domain-containing protein 4|
          Length = 804

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 310 YCHRCIKLLAGVLSCSGC 363
           YCHRC+K     + C GC
Sbjct: 295 YCHRCLKHTLATVPCDGC 312

>CATA_BACST (P14412) Peroxidase/catalase (EC 1.11.1.6) (Catalase-peroxidase)|
          Length = 735

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +2

Query: 170 WWPLSLSLTCMHRH*TRPDGHD 235
           WWP  L+L+ +H+H  + + HD
Sbjct: 31  WWPNQLNLSILHQHDRKTNPHD 52

>SMYD4_CHICK (Q5F3V0) SET and MYND domain-containing protein 4|
          Length = 742

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 310 YCHRCIKLLAGVLSCSGC 363
           YCH C+K L   + C GC
Sbjct: 294 YCHHCLKQLLASIPCCGC 311

>TELT_MOUSE (O70548) Telethonin (Titin cap protein)|
          Length = 167

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = +1

Query: 205 QTLNEAGWARWRSSTANTKPVRLCG*LAPDGHEEQYCHR 321
           Q   EA WA W+  T +T+P   C     D    +  HR
Sbjct: 15  QERREAFWAEWKDLTLSTRPEEGCSLHEEDTQRHETYHR 53

>COX1_KLULA (P20386) Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c|
           oxidase polypeptide I)
          Length = 534

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 13/22 (59%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
 Frame = -2

Query: 168 GSPFSLFS-YYSWSPLMLSNYY 106
           G+ FSLF+ YY WSP +L  YY
Sbjct: 384 GAIFSLFAGYYYWSPQILGLYY 405

>MATK_MORAL (Q8WKM1) Maturase K (Intron maturase)|
          Length = 505

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -2

Query: 159 FSLFSYYSWSPLMLSNYYISCY 94
           F L  YY+W+ L++ N YIS +
Sbjct: 178 FFLHDYYNWNTLIIPNKYISIF 199

>OR98B_DROME (Q9VAW0) Putative odorant receptor 98b|
          Length = 384

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = -2

Query: 219 LVQCLCMHVSERERGHHGSPFSLFSYYSWSPLMLSNYYISCY 94
           L+  L M +S +  G     F   S Y W  + LSNY IS +
Sbjct: 141 LMSPLSMLISYQRTGELQPKFPFPSVYPWDNMKLSNYIISYF 182

>VIF_CAEVC (P33462) Virion infectivity factor (Q protein) (SOR protein)|
          Length = 229

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 15/50 (30%), Positives = 18/50 (36%)
 Frame = -3

Query: 320 RWQYCSSCPSGAS*PHKRTGFVLAVLLLHRAHPASFSVCACM*VREREAT 171
           RW  C SC  G    H RT  +  ++LL       F V      R    T
Sbjct: 150 RWDLCKSCAQGEVVKHTRTKSLERLVLLQMVEQHVFQVLPLWRARRSSTT 199

>UBR1_CAEEL (P91133) Ubiquitin-protein ligase E3 component N-recognin (EC|
            6.-.-.-) (Ubiquitin-protein ligase E3-alpha)
          Length = 1927

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = -3

Query: 362  QPEQLSTPANNLMQRWQYCSSCPSGAS*PHKRTGFVLAVLLLHRAHP 222
            +P+   TP + L+      S  P+ A  PH  T F   V L + A P
Sbjct: 1562 RPKLAQTPGSPLLSAPSTSSFTPAPAQIPHSGTNFAFLVQLFNPAGP 1608

>DSRAD_HUMAN (P55265) Double-stranded RNA-specific adenosine deaminase (EC|
           3.5.4.-) (DRADA) (136 kDa double-stranded RNA-binding
           protein) (P136) (K88DSRBP) (Interferon-inducible protein
           4) (IFI-4 protein)
          Length = 1226

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = +2

Query: 149 KSENGDPWWPLSLSLTCMHRH*--TRPDGHDGGAVLPTRSPSV 271
           K     P W +++S    ++H    RPDGH  GA  P   PS+
Sbjct: 187 KEAGTPPLWKIAVSTQAWNQHSGVVRPDGHSQGA--PNSDPSL 227

>ZN297_MOUSE (Q9Z0G7) Zinc finger protein 297 (BING1 protein)|
          Length = 638

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = -1

Query: 322 NGGSTAPRVHPALASHTNGRASCWQYCSSIVPIRPR 215
           NGG+ AP    ++ SHT+ RAS  Q  SS     PR
Sbjct: 178 NGGTVAPATVGSVRSHTSSRASENQSPSSSNYFSPR 213


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,974,821
Number of Sequences: 219361
Number of extensions: 1027111
Number of successful extensions: 2227
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2226
length of database: 80,573,946
effective HSP length: 96
effective length of database: 59,515,290
effective search space used: 1428366960
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)