ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart36a12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC124725.3| Mus musculus BAC clone RP23-459F16 from chromosom... 44 0.41
2emb|AL139824.22| Human DNA sequence from clone RP11-380D15 on ch... 44 0.41
3emb|BX901978.14| Zebrafish DNA sequence from clone DKEY-155M6 in... 44 0.41
4emb|BX465846.14| Zebrafish DNA sequence from clone CH211-215B21 ... 44 0.41
5gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 44 0.41
6emb|BX294446.6| Mouse DNA sequence from clone RP23-459F16 on chr... 44 0.41
7gb|AY023988.1| Oryza sativa microsatellite MRG6313 containing (C... 42 1.6
8gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 42 1.6
9gb|AC146610.4| Mus musculus BAC clone RP23-68E7 from chromosome ... 42 1.6
10gb|AC122523.5| Mus musculus BAC clone RP24-492N18 from chromosom... 42 1.6
11emb|BX842577.1| Mycobacterium tuberculosis H37Rv complete genome... 42 1.6
12emb|BX248340.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 42 1.6
13emb|AL606598.3|OSJN00036 Oryza sativa genomic DNA, chromosome 4,... 42 1.6
14emb|AL929016.5| Zebrafish DNA sequence from clone DKEY-24J9 in l... 42 1.6
15dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
16gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 1.6
17gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1... 42 1.6
18emb|AL606618.4|OSJN00062 Oryza sativa genomic DNA, chromosome 4,... 42 1.6
19ref|NM_001017003.2| Xenopus tropicalis hypothetical protein LOC5... 40 6.4
20gb|AC134922.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.4
21ref|NM_028735.1| Mus musculus tetratricopeptide repeat domain 21... 40 6.4
22gb|AC124662.10| Mus musculus chromosome 9, clone RP24-409K22, co... 40 6.4
23gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome 40 6.4
24gb|AC119968.9| Mus musculus chromosome 8, clone RP24-473C10, com... 40 6.4
25gb|AC149215.3| Mus musculus BAC clone RP24-201G21 from chromosom... 40 6.4
26gb|AC117245.3| Mus musculus BAC clone RP24-233B16 from 9, comple... 40 6.4
27gb|AC134924.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.4
28gb|AC146480.2| Danio rerio clone CH211-40O9, complete sequence 40 6.4
29emb|CR383684.7| Zebrafish DNA sequence from clone DKEYP-69E1 in ... 40 6.4
30emb|AL591034.5| Human DNA sequence from clone RP11-96J19 on chro... 40 6.4
31emb|AL606456.2|OSJN00017 Oryza sativa genomic DNA, chromosome 4,... 40 6.4
32emb|AL672010.8| Mouse DNA sequence from clone RP23-223C15 on chr... 40 6.4
33dbj|AK133304.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 6.4
34dbj|AK163163.1| Mus musculus 7 days neonate cerebellum cDNA, RIK... 40 6.4
35ref|XM_683108.1| PREDICTED: Danio rerio similar to high-mobility... 40 6.4
36dbj|AK015017.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 6.4
37dbj|AK029952.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 6.4
38dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
39gb|AC079147.5| Homo sapiens BAC clone RP11-101B5 from 2, complet... 40 6.4
40gb|AE004672.1| Pseudomonas aeruginosa PAO1, section 233 of 529 o... 40 6.4
41emb|AL929558.13| Zebrafish DNA sequence from clone CH211-159N7, ... 40 6.4
42dbj|AK120361.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.4
43ref|XM_313005.2| Anopheles gambiae str. PEST ENSANGP00000020427 ... 40 6.4
44dbj|AK107890.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.4
45dbj|AK106728.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.4
46dbj|AK105350.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.4
47emb|BX664613.17| Zebrafish DNA sequence from clone DKEY-5P5 in l... 40 6.4
48gb|AC116882.9| Mus musculus chromosome 8, clone RP24-435G18, com... 40 6.4
49gb|AY105026.1| Zea mays PCO062519 mRNA sequence 40 6.4
50emb|AL732354.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 6.4
51emb|CR762314.2| Xenopus tropicalis finished cDNA, clone TGas109f05 40 6.4
52gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.4
53gb|AC133948.3| Mus musculus BAC clone RP24-226H19 from 10, compl... 40 6.4
54emb|AL805931.4| Mouse DNA sequence from clone RP23-195A22 on chr... 40 6.4
55emb|CT027681.7| Mouse DNA sequence from clone RP24-330H24 on chr... 40 6.4 
>gb|AC124725.3| Mus musculus BAC clone RP23-459F16 from chromosome 2, complete sequence
          Length = 168983

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 23    aactaacaaataaacaaagcag 44
             ||||||||||||||||||||||
Sbjct: 77391 aactaacaaataaacaaagcag 77370
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>emb|AL139824.22| Human DNA sequence from clone RP11-380D15 on chromosome 20 Contains the
              MC3R gene for melanocortin 3 receptor, a zinc finger
              pseudogene and a novel gene, complete sequence
          Length = 193144

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 19     aatgaactaacaaataaacaaa 40
              ||||||||||||||||||||||
Sbjct: 133585 aatgaactaacaaataaacaaa 133606
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>emb|BX901978.14| Zebrafish DNA sequence from clone DKEY-155M6 in linkage group 18,
             complete sequence
          Length = 168101

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 17    caaatgaactaacaaataaaca 38
             ||||||||||||||||||||||
Sbjct: 85087 caaatgaactaacaaataaaca 85108
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>emb|BX465846.14| Zebrafish DNA sequence from clone CH211-215B21 in linkage group 18,
             complete sequence
          Length = 109342

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 17    caaatgaactaacaaataaaca 38
             ||||||||||||||||||||||
Sbjct: 46171 caaatgaactaacaaataaaca 46150
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 334     gttcttccacctcgtcgacctcgttctcgc 363
               ||||||| ||||||||||||| ||||||||
Sbjct: 2760563 gttcttcgacctcgtcgaccttgttctcgc 2760592
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>emb|BX294446.6| Mouse DNA sequence from clone RP23-459F16 on chromosome 2, complete
             sequence
          Length = 73907

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 23    aactaacaaataaacaaagcag 44
             ||||||||||||||||||||||
Sbjct: 20846 aactaacaaataaacaaagcag 20867
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>gb|AY023988.1| Oryza sativa microsatellite MRG6313 containing (CACG)X6, closest to
           marker S10628, genomic sequence
          Length = 224

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 372 gcgtggtggtggtggagacgt 392
           |||||||||||||||||||||
Sbjct: 195 gcgtggtggtggtggagacgt 215
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 367     catgcgcgtggtggtggtgga 387
               |||||||||||||||||||||
Sbjct: 2074901 catgcgcgtggtggtggtgga 2074921
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>gb|AC146610.4| Mus musculus BAC clone RP23-68E7 from chromosome 7, complete sequence
          Length = 218291

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 217   ggttcaggaggcccttgaacc 237
             |||||||||||||||||||||
Sbjct: 52487 ggttcaggaggcccttgaacc 52467
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>gb|AC122523.5| Mus musculus BAC clone RP24-492N18 from chromosome 7, complete sequence
          Length = 163841

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 217    ggttcaggaggcccttgaacc 237
              |||||||||||||||||||||
Sbjct: 131891 ggttcaggaggcccttgaacc 131871
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>emb|BX842577.1| Mycobacterium tuberculosis H37Rv complete genome; segment 6/13
          Length = 347496

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 367    catgcgcgtggtggtggtgga 387
              |||||||||||||||||||||
Sbjct: 346419 catgcgcgtggtggtggtgga 346439
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>emb|BX248340.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 7/14
          Length = 291050

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 367    catgcgcgtggtggtggtgga 387
              |||||||||||||||||||||
Sbjct: 154028 catgcgcgtggtggtggtgga 154048
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>emb|AL606598.3|OSJN00036 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G16,
              complete sequence
          Length = 114051

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 372    gcgtggtggtggtggagacgt 392
              |||||||||||||||||||||
Sbjct: 113222 gcgtggtggtggtggagacgt 113202
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>emb|AL929016.5| Zebrafish DNA sequence from clone DKEY-24J9 in linkage group 4 Contains
              the gene for a novel protein (zgc:63880), the 3' end of the
              gene for a novel protein similar to vertebrate KCND2, the
              5' end of the ing3 gene for inhibitor of growth family
              member 3 and a CpG island, complete sequence
          Length = 200582

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 16     gcaaatgaactaacaaataaacaaa 40
              |||||||||| ||||||||||||||
Sbjct: 184074 gcaaatgaacgaacaaataaacaaa 184098



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 17     caaatgaactaacaaataaacaaa 40
              |||||||||||||||| |||||||
Sbjct: 183707 caaatgaactaacaaacaaacaaa 183730
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 372      gcgtggtggtggtggagacgt 392
                |||||||||||||||||||||
Sbjct: 20678788 gcgtggtggtggtggagacgt 20678768



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 274      ggcggcggccgccatggctg 293
                ||||||||||||||||||||
Sbjct: 34786769 ggcggcggccgccatggctg 34786750
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 374     gtggtggtggtggagacgtcg 394
               |||||||||||||||||||||
Sbjct: 1601782 gtggtggtggtggagacgtcg 1601802
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>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome
          Length = 1751080

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 146    gattaaccaaagtaattaaac 166
              |||||||||||||||||||||
Sbjct: 320411 gattaaccaaagtaattaaac 320391
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>emb|AL606618.4|OSJN00062 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0108J11,
             complete sequence
          Length = 124629

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 372   gcgtggtggtggtggagacgt 392
             |||||||||||||||||||||
Sbjct: 24939 gcgtggtggtggtggagacgt 24919
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>ref|NM_001017003.2| Xenopus tropicalis hypothetical protein LOC549757 (LOC549757), mRNA
          Length = 1754

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 132 cagtacagggaacagattaa 151
           ||||||||||||||||||||
Sbjct: 533 cagtacagggaacagattaa 552
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>gb|AC134922.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0004D06, complete sequence
          Length = 157547

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 274   ggcggcggccgccatggctg 293
             ||||||||||||||||||||
Sbjct: 29333 ggcggcggccgccatggctg 29314
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>ref|NM_028735.1| Mus musculus tetratricopeptide repeat domain 21A (ttc21a), mRNA
          Length = 4187

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 394 ggaacagcttcatcttcagg 413
           ||||||||||||||||||||
Sbjct: 795 ggaacagcttcatcttcagg 776
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>gb|AC124662.10| Mus musculus chromosome 9, clone RP24-409K22, complete sequence
          Length = 235471

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 394   ggaacagcttcatcttcagg 413
             ||||||||||||||||||||
Sbjct: 36685 ggaacagcttcatcttcagg 36704
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>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 182    gcgccggccggcggtacgta 201
              ||||||||||||||||||||
Sbjct: 472526 gcgccggccggcggtacgta 472507
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>gb|AC119968.9| Mus musculus chromosome 8, clone RP24-473C10, complete sequence
          Length = 202850

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 17    caaatgaactaacaaataaacaaa 40
             ||||||||| ||||||||||||||
Sbjct: 57491 caaatgaacaaacaaataaacaaa 57514
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>gb|AC149215.3| Mus musculus BAC clone RP24-201G21 from chromosome 7, complete
            sequence
          Length = 174164

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 18   aaatgaactaacaaataaacaaag 41
            |||||||| |||||||||||||||
Sbjct: 3373 aaatgaacaaacaaataaacaaag 3350
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>gb|AC117245.3| Mus musculus BAC clone RP24-233B16 from 9, complete sequence
          Length = 177775

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 394    ggaacagcttcatcttcagg 413
              ||||||||||||||||||||
Sbjct: 153438 ggaacagcttcatcttcagg 153457
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>gb|AC134924.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBb0076M06, complete sequence
          Length = 133581

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 274    ggcggcggccgccatggctg 293
              ||||||||||||||||||||
Sbjct: 129150 ggcggcggccgccatggctg 129131
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>gb|AC146480.2| Danio rerio clone CH211-40O9, complete sequence
          Length = 166906

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 17   caaatgaactaacaaataaacaaa 40
            ||||||||| ||||||||||||||
Sbjct: 5571 caaatgaacaaacaaataaacaaa 5594
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>emb|CR383684.7| Zebrafish DNA sequence from clone DKEYP-69E1 in linkage group 3,
             complete sequence
          Length = 111124

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 399   agcttcatcttcaggccttc 418
             ||||||||||||||||||||
Sbjct: 42077 agcttcatcttcaggccttc 42058
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>emb|AL591034.5| Human DNA sequence from clone RP11-96J19 on chromosome 6 Contains a 60S
             ribosomal protein L31 (RPL31) pseudogene, a replication
             protein A3 (RPA3) pseudogene and the gene for a novel
             protein, complete sequence
          Length = 94727

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 17    caaatgaactaacaaataaacaaa 40
             ||||||||| ||||||||||||||
Sbjct: 25726 caaatgaacaaacaaataaacaaa 25703
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>emb|AL606456.2|OSJN00017 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0017I01,
             complete sequence
          Length = 133331

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 274   ggcggcggccgccatggctg 293
             ||||||||||||||||||||
Sbjct: 92328 ggcggcggccgccatggctg 92309
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>emb|AL672010.8| Mouse DNA sequence from clone RP23-223C15 on chromosome 11 Contains
             three novel genes and a CpG island, complete sequence
          Length = 193223

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 16    gcaaatgaactaacaaataaacaa 39
             |||||||||| |||||||||||||
Sbjct: 15296 gcaaatgaacaaacaaataaacaa 15273
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>dbj|AK133304.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4932431P04 product:Hypothetical
           tetratricopeptide repeat homolog [Mus musculus], full
           insert sequence
          Length = 4042

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 394 ggaacagcttcatcttcagg 413
           ||||||||||||||||||||
Sbjct: 763 ggaacagcttcatcttcagg 744
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>dbj|AK163163.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length
           enriched library, clone:A730057N22 product:Hypothetical
           tetratricopeptide repeat homolog [Mus musculus], full
           insert sequence
          Length = 3328

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 394 ggaacagcttcatcttcagg 413
           ||||||||||||||||||||
Sbjct: 644 ggaacagcttcatcttcagg 625
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>ref|XM_683108.1| PREDICTED: Danio rerio similar to high-mobility group protein
           2-like 1 isoform a (LOC559742), mRNA
          Length = 1887

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 399 agcttcatcttcaggccttc 418
           ||||||||||||||||||||
Sbjct: 662 agcttcatcttcaggccttc 643
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>dbj|AK015017.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4921538N17 product:hypothetical TPR
           repeat containing protein, full insert sequence
          Length = 4126

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 394 ggaacagcttcatcttcagg 413
           ||||||||||||||||||||
Sbjct: 751 ggaacagcttcatcttcagg 732
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>dbj|AK029952.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4932410I19 product:hypothetical
           Tetratricopeptide repeat (TPR) structure containing
           protein, full insert sequence
          Length = 4187

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 394 ggaacagcttcatcttcagg 413
           ||||||||||||||||||||
Sbjct: 795 ggaacagcttcatcttcagg 776
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 274      ggcggcggccgccatggctg 293
                ||||||||||||||||||||
Sbjct: 26327501 ggcggcggccgccatggctg 26327482
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>gb|AC079147.5| Homo sapiens BAC clone RP11-101B5 from 2, complete sequence
          Length = 82624

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 17    caaatgaactaacaaataaa 36
             ||||||||||||||||||||
Sbjct: 31503 caaatgaactaacaaataaa 31522
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>gb|AE004672.1| Pseudomonas aeruginosa PAO1, section 233 of 529 of the complete
            genome
          Length = 10855

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 367  catgcgcgtggtggtggtgg 386
            ||||||||||||||||||||
Sbjct: 1125 catgcgcgtggtggtggtgg 1106
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>emb|AL929558.13| Zebrafish DNA sequence from clone CH211-159N7, complete sequence
          Length = 170597

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 17   caaatgaactaacaaataaacaaa 40
            ||||||||| ||||||||||||||
Sbjct: 5549 caaatgaacaaacaaataaacaaa 5572
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>dbj|AK120361.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067O03, full
           insert sequence
          Length = 3399

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 274 ggcggcggccgccatggctg 293
           ||||||||||||||||||||
Sbjct: 135 ggcggcggccgccatggctg 116
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>ref|XM_313005.2| Anopheles gambiae str. PEST ENSANGP00000020427
           (ENSANGG00000017938), partial mRNA
          Length = 573

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 395 gaacagcttcatcttcaggc 414
           ||||||||||||||||||||
Sbjct: 78  gaacagcttcatcttcaggc 59
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>dbj|AK107890.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-E06, full
           insert sequence
          Length = 833

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 274 ggcggcggccgccatggctg 293
           ||||||||||||||||||||
Sbjct: 126 ggcggcggccgccatggctg 107
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>dbj|AK106728.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-H07, full
            insert sequence
          Length = 2386

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 274  ggcggcggccgccatggctg 293
            ||||||||||||||||||||
Sbjct: 2100 ggcggcggccgccatggctg 2119
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>dbj|AK105350.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-A05, full
           insert sequence
          Length = 1300

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 274 ggcggcggccgccatggctg 293
           ||||||||||||||||||||
Sbjct: 57  ggcggcggccgccatggctg 38
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>emb|BX664613.17| Zebrafish DNA sequence from clone DKEY-5P5 in linkage group 22,
             complete sequence
          Length = 121435

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 17    caaatgaactaacaaataaacaaa 40
             ||||||||| ||||||||||||||
Sbjct: 46340 caaatgaacaaacaaataaacaaa 46317
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>gb|AC116882.9| Mus musculus chromosome 8, clone RP24-435G18, complete sequence
          Length = 187290

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 17  caaatgaactaacaaataaacaaa 40
           ||||||||| ||||||||||||||
Sbjct: 624 caaatgaacaaacaaataaacaaa 601
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>gb|AY105026.1| Zea mays PCO062519 mRNA sequence
          Length = 1503

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 208  tctagaatcggttcaggaggcccttgaaccag 239
            ||||||| ||||||| ||||||||||| ||||
Sbjct: 1086 tctagaaccggttcatgaggcccttgatccag 1055
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>emb|AL732354.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0901F07, complete
             sequence
          Length = 110682

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 274   ggcggcggccgccatggctg 293
             ||||||||||||||||||||
Sbjct: 31971 ggcggcggccgccatggctg 31952
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>emb|CR762314.2| Xenopus tropicalis finished cDNA, clone TGas109f05
          Length = 1754

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 132 cagtacagggaacagattaa 151
           ||||||||||||||||||||
Sbjct: 533 cagtacagggaacagattaa 552
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 274      ggcggcggccgccatggctg 293
                ||||||||||||||||||||
Sbjct: 26641759 ggcggcggccgccatggctg 26641740
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>gb|AC133948.3| Mus musculus BAC clone RP24-226H19 from 10, complete sequence
          Length = 168206

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 17    caaatgaactaacaaataaacaaa 40
             ||||||||| ||||||||||||||
Sbjct: 97088 caaatgaacaaacaaataaacaaa 97065
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>emb|AL805931.4| Mouse DNA sequence from clone RP23-195A22 on chromosome X, complete
             sequence
          Length = 157176

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 17    caaatgaactaacaaataaacaaa 40
             ||||||||| ||||||||||||||
Sbjct: 94075 caaatgaacaaacaaataaacaaa 94098
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>emb|CT027681.7| Mouse DNA sequence from clone RP24-330H24 on chromosome 16, complete
             sequence
          Length = 190475

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 313   cctcgccaagcttcctagcc 332
             ||||||||||||||||||||
Sbjct: 20391 cctcgccaagcttcctagcc 20372


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,790,274
Number of Sequences: 3902068
Number of extensions: 3790274
Number of successful extensions: 97663
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 97059
Number of HSP's gapped (non-prelim): 604
length of query: 475
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 453
effective length of database: 17,147,199,772
effective search space: 7767681496716
effective search space used: 7767681496716
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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