Clone Name | rbart36a05 |
---|---|
Clone Library Name | barley_pub |
>GL21_ARATH (P94014) Germin-like protein subfamily 2 member 1 precursor| Length = 207 Score = 33.1 bits (74), Expect = 0.48 Identities = 17/37 (45%), Positives = 23/37 (62%) Frame = +1 Query: 229 MPLPISRAILSLVTIIFFSAVCSSDPDLLVDYCVADM 339 M P +L L T+ FF + S+DPD+L D CVAD+ Sbjct: 1 MASPTLTLLLLLTTVSFFIS-SSADPDMLQDLCVADL 36
>OXO2_HORVU (P45851) Oxalate oxidase 2 precursor (EC 1.2.3.4) (Germin)| Length = 224 Score = 31.2 bits (69), Expect = 1.8 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +1 Query: 250 AILSLVTIIFFSAVCSSDPDLLVDYCVADMRAAA 351 A+ ++ AV +SDPD L D+CVAD+ A Sbjct: 8 AVSLFAVLLLAPAVLASDPDPLQDFCVADLDGKA 41
>GLT1_ARATH (P92995) Germin-like protein subfamily T member 1 precursor| Length = 220 Score = 29.6 bits (65), Expect = 5.3 Identities = 16/41 (39%), Positives = 25/41 (60%) Frame = +1 Query: 229 MPLPISRAILSLVTIIFFSAVCSSDPDLLVDYCVADMRAAA 351 +P + R+ L L+ +F SSD D L D+CV D++A+A Sbjct: 6 IPSALLRSFL-LMFCLFVIPSLSSDSDPLQDFCVGDLKASA 45
>DPOLQ_HUMAN (O75417) DNA polymerase theta (EC 2.7.7.7) (DNA polymerase eta)| Length = 1762 Score = 29.6 bits (65), Expect = 5.3 Identities = 13/40 (32%), Positives = 24/40 (60%) Frame = -2 Query: 336 VGDAVVDEEVRVGAADGGEEDDRHERKDGSRDGKRHGWLW 217 + D V+DE + G DGG++D+R E+ + + H ++W Sbjct: 765 LSDPVLDEHHQ-GDQDGGDQDERAEKSKLTGTRQNHSFIW 803
>CAC1B_HUMAN (Q00975) Voltage-dependent N-type calcium channel alpha-1B subunit| (Voltage-gated calcium channel alpha subunit Cav2.2) (Calcium channel, L type, alpha-1 polypeptide isoform 5) (Brain calcium channel III) (BIII) Length = 2339 Score = 29.3 bits (64), Expect = 7.0 Identities = 22/84 (26%), Positives = 35/84 (41%) Frame = +1 Query: 238 PISRAILSLVTIIFFSAVCSSDPDLLVDYCVADMRAAAGAHRHSYRCHPPPFYFVPLRQA 417 P+ R+I +L + +CS+ PD + A +H H +RCH + Sbjct: 2017 PMKRSISTLAQRPRGTHLCSTTPD-------RPPPSQASSHHHHHRCHR------RRDRK 2063 Query: 418 QRGRREGNSLALRCSSEPRAAANP 489 QR +G SL+ P +A P Sbjct: 2064 QRSLEKGPSLSADMDGAPSSAVGP 2087
>GER2_WHEAT (P15290) Oxalate oxidase GF-2.8 precursor (EC 1.2.3.4) (Germin| GF-2.8) Length = 224 Score = 29.3 bits (64), Expect = 7.0 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = +1 Query: 271 IIFFSAVCSSDPDLLVDYCVADMRAAAGAHRHSYRCHP 384 ++ AV ++DPD L D+CVAD+ A + + C P Sbjct: 15 LLLAPAVLATDPDPLQDFCVADLDGKA-VSVNGHTCKP 51
>HTRA1_HUMAN (Q92743) Serine protease HTRA1 precursor (EC 3.4.21.-) (L56)| Length = 480 Score = 28.9 bits (63), Expect = 9.1 Identities = 21/67 (31%), Positives = 29/67 (43%) Frame = +1 Query: 247 RAILSLVTIIFFSAVCSSDPDLLVDYCVADMRAAAGAHRHSYRCHPPPFYFVPLRQAQRG 426 RA L VC SD + + C +RAA+ R S R H PP + +G Sbjct: 104 RAQAGLCVCASSEPVCGSDANTYANLC--QLRAAS---RRSERLHRPPVIVLQRGACGQG 158 Query: 427 RREGNSL 447 + + NSL Sbjct: 159 QEDPNSL 165
>TRPC_DEIRA (Q9RUG0) Indole-3-glycerol phosphate synthase (EC 4.1.1.48) (IGPS)| Length = 267 Score = 28.9 bits (63), Expect = 9.1 Identities = 15/36 (41%), Positives = 19/36 (52%) Frame = +1 Query: 412 QAQRGRREGNSLALRCSSEPRAAANPIDGLRCGVAA 519 QA R EG + A+ C +EPR + LR VAA Sbjct: 81 QAARAYAEGGAAAISCLTEPRHFGGSPEALRAVVAA 116
>GLT2_ARATH (Q9LMC9) Germin-like protein subfamily T member 2 precursor| Length = 220 Score = 28.9 bits (63), Expect = 9.1 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = +1 Query: 262 LVTIIFFSAVCSSDPDLLVDYCVADMRAA 348 LV +F SSD D L D+CV D++A+ Sbjct: 16 LVICVFVIPSLSSDSDPLQDFCVGDLKAS 44
>GL111_ARATH (Q9FMA8) Germin-like protein subfamily 1 member 11 precursor| Length = 223 Score = 28.9 bits (63), Expect = 9.1 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 6/63 (9%) Frame = +1 Query: 250 AILSLVTIIFFSAVCSSDPDLLVDYCVADMRAAAGAHRHSYRCHPP------PFYFVPLR 411 A+LSL+ + A+ +SDP L D+CV+ +A G + C P F+F L+ Sbjct: 10 AVLSLLALTLPLAI-ASDPSQLQDFCVSANTSANGVFVNGKFCKDPKLVTADDFFFSGLQ 68 Query: 412 QAQ 420 A+ Sbjct: 69 TAR 71
>GER3_WHEAT (P26759) Oxalate oxidase GF-3.8 precursor (EC 1.2.3.4) (Germin| GF-3.8) Length = 224 Score = 28.9 bits (63), Expect = 9.1 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = +1 Query: 271 IIFFSAVCSSDPDLLVDYCVADMRAAAGAHRHSYRCHP 384 ++ SAV SS+P L D+CVAD+ A + + C P Sbjct: 15 LLLASAVLSSNPHPLQDFCVADLDGKA-VSVNGHMCKP 51 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 67,879,471 Number of Sequences: 219361 Number of extensions: 1300320 Number of successful extensions: 3992 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 3846 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3986 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4027872870 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)