ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart36a03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DQ219479.1| wheat putative xylanase inhibitor mRNA, partial cds Length = 347 Score = 359 bits (181), Expect = 6e-96 Identities = 280/312 (89%), Gaps = 7/312 (2%) Strand = Plus / Minus Query: 130 gcatgcaacaaacgatgtggatggatcactaggcggccttggtgaaattgaagttgctgc 189 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 329 gcatgcaacaaacgatgtggat----cactaggcggccttggtgaaattgaagttgctgc 274 Query: 190 aggtgagccccctgccagggaggttcggagtgaagctgaacgtcttcttgtcgttgtcga 249 ||| || ||| |||| ||||||||| | |||||||||| |||||||||| |||||| | Sbjct: 273 aggagaagcccatgcccgggaggttctgggtgaagctgagcgtcttcttgctgttgtcca 214 Query: 250 gcaccaccagcttgttctccatctggaaccctccgatcaccaccgccggcgtcgcg---c 306 |||||||||||||||||||||||||||||||||||||||| || |||||||||||| | Sbjct: 213 gcaccaccagcttgttctccatctggaaccctccgatcacaactgccggcgtcgcgctcc 154 Query: 307 ccgtgctgcctcccgaccggacgaacgcgaagcaggccgtgccgctgttcacctgcgcca 366 |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 153 ccgtgctgcctcccgaccggacgaacgcgaagcacgccgtgccgctattcacctgcgcca 94 Query: 367 tggagtttcccccgcccaccgagaagttcgtcccgccctccagcatcacgtccacgtccg 426 ||||||| || || |||||| |||||||||||||||||||||||||| ||| || || Sbjct: 93 tggagttgccgcccaccaccgtccagttcgtcccgccctccagcatcacgcccatgttcg 34 Query: 427 gcaccaggtacc 438 |||||||||||| Sbjct: 33 gcaccaggtacc 22
>ref|NM_190071.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1275 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 245 gtcgagcaccaccagcttgttctccatctggaaccctccgatcaccaccgccggcg 300 ||||| ||||||||| |||||||||||||||||||||||||| | | ||||||||| Sbjct: 1188 gtcgaacaccaccaggttgttctccatctggaaccctccgatgatcgccgccggcg 1133 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 gtgaaattgaagttgctgcaggtg 194 ||||| |||||||||||||||||| Sbjct: 1262 gtgaagttgaagttgctgcaggtg 1239 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 464 cgagttgtagcacagctcgaacgg 487 ||||| |||||||||||||||||| Sbjct: 963 cgagtcgtagcacagctcgaacgg 940
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 245 gtcgagcaccaccagcttgttctccatctggaaccctccgatcaccaccgccggcg 300 ||||| ||||||||| |||||||||||||||||||||||||| | | ||||||||| Sbjct: 41131801 gtcgaacaccaccaggttgttctccatctggaaccctccgatgatcgccgccggcg 41131856 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 245 gtcgagcaccaccagcttgttctccatctggaaccctccgatcaccaccgccgg 298 ||||| ||||||||| |||| |||||||||| ||| ||||||||||||||||| Sbjct: 41126161 gtcgaacaccaccaggttgtgctccatctggtgcccgccgatcaccaccgccgg 41126214 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 262 tgttctccatctggaaccctccgatcaccaccgccggcg 300 |||||||||||||||||||||||| | ||||||||||| Sbjct: 41134602 tgttctccatctggaaccctccgaggatcaccgccggcg 41134640 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 467 gttgtagcacagctcgaacggggccacg 494 |||| |||| |||||||||||||||||| Sbjct: 41138122 gttgaagcagagctcgaacggggccacg 41138149 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 167 cttggtgaaattgaagttgctgca 190 |||||||||||||||||| ||||| Sbjct: 41134513 cttggtgaaattgaagttactgca 41134536 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 464 cgagttgtagcacagctcgaacgg 487 ||||| |||||||||||||||||| Sbjct: 41132026 cgagtcgtagcacagctcgaacgg 41132049 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 171 gtgaaattgaagttgctgcaggtg 194 ||||| |||||||||||||||||| Sbjct: 41131727 gtgaagttgaagttgctgcaggtg 41131750 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 470 gtagcacagctcgaacggggccac 493 |||||||||||||||||| ||||| Sbjct: 41126389 gtagcacagctcgaacggcgccac 41126412 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 171 gtgaaattgaagttgctgcaggtg 194 ||||| |||||||||||||||||| Sbjct: 41126087 gtgaagttgaagttgctgcaggtg 41126110 Score = 40.1 bits (20), Expect = 7.0 Identities = 47/56 (83%) Strand = Plus / Plus Query: 245 gtcgagcaccaccagcttgttctccatctggaaccctccgatcaccaccgccggcg 300 ||||| ||||||||| |||| ||||||||| ||| ||||| | ||||||||||| Sbjct: 41118987 gtcgaacaccaccaggttgtcctccatctgatgcccgccgatgatcaccgccggcg 41119042
>dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0504E02 Length = 137468 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 245 gtcgagcaccaccagcttgttctccatctggaaccctccgatcaccaccgccggcg 300 ||||| ||||||||| |||||||||||||||||||||||||| | | ||||||||| Sbjct: 28856 gtcgaacaccaccaggttgttctccatctggaaccctccgatgatcgccgccggcg 28911 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 245 gtcgagcaccaccagcttgttctccatctggaaccctccgatcaccaccgccgg 298 ||||| ||||||||| |||| |||||||||| ||| ||||||||||||||||| Sbjct: 23216 gtcgaacaccaccaggttgtgctccatctggtgcccgccgatcaccaccgccgg 23269 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 262 tgttctccatctggaaccctccgatcaccaccgccggcg 300 |||||||||||||||||||||||| | ||||||||||| Sbjct: 31657 tgttctccatctggaaccctccgaggatcaccgccggcg 31695 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 467 gttgtagcacagctcgaacggggccacg 494 |||| |||| |||||||||||||||||| Sbjct: 35177 gttgaagcagagctcgaacggggccacg 35204 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 167 cttggtgaaattgaagttgctgca 190 |||||||||||||||||| ||||| Sbjct: 31568 cttggtgaaattgaagttactgca 31591 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 464 cgagttgtagcacagctcgaacgg 487 ||||| |||||||||||||||||| Sbjct: 29081 cgagtcgtagcacagctcgaacgg 29104 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 171 gtgaaattgaagttgctgcaggtg 194 ||||| |||||||||||||||||| Sbjct: 28782 gtgaagttgaagttgctgcaggtg 28805 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 470 gtagcacagctcgaacggggccac 493 |||||||||||||||||| ||||| Sbjct: 23444 gtagcacagctcgaacggcgccac 23467 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 171 gtgaaattgaagttgctgcaggtg 194 ||||| |||||||||||||||||| Sbjct: 23142 gtgaagttgaagttgctgcaggtg 23165 Score = 40.1 bits (20), Expect = 7.0 Identities = 47/56 (83%) Strand = Plus / Plus Query: 245 gtcgagcaccaccagcttgttctccatctggaaccctccgatcaccaccgccggcg 300 ||||| ||||||||| |||| ||||||||| ||| ||||| | ||||||||||| Sbjct: 16042 gtcgaacaccaccaggttgtcctccatctgatgcccgccgatgatcaccgccggcg 16097
>gb|AY106084.1| Zea mays PCO072275 mRNA sequence Length = 1307 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 353 gttcacctgcgccatggagtttcccccgcccaccgagaagttcgtcccgccctccagcat 412 |||||||||| |||||||||| || ||| ||||| ||||||| ||||||||||||||| Sbjct: 1003 gttcacctgcaccatggagttgccgccgagcaccgtgaagttctgcccgccctccagcat 944 Query: 413 cacgtc 418 |||||| Sbjct: 943 cacgtc 938
>ref|NM_190069.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1269 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 245 gtcgagcaccaccagcttgttctccatctggaaccctccgatcaccaccgccgg 298 ||||| ||||||||| |||| |||||||||| ||| ||||||||||||||||| Sbjct: 1182 gtcgaacaccaccaggttgtgctccatctggtgcccgccgatcaccaccgccgg 1129 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 gtgaaattgaagttgctgcaggtg 194 ||||| |||||||||||||||||| Sbjct: 1256 gtgaagttgaagttgctgcaggtg 1233 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 470 gtagcacagctcgaacggggccac 493 |||||||||||||||||| ||||| Sbjct: 954 gtagcacagctcgaacggcgccac 931
>dbj|AK108620.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-C07, full insert sequence Length = 1405 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 245 gtcgagcaccaccagcttgttctccatctggaaccctccgatcaccaccgccgg 298 ||||| ||||||||| |||| |||||||||| ||| ||||||||||||||||| Sbjct: 1103 gtcgaacaccaccaggttgtgctccatctggtgcccgccgatcaccaccgccgg 1050 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 gtgaaattgaagttgctgcaggtg 194 ||||| |||||||||||||||||| Sbjct: 1177 gtgaagttgaagttgctgcaggtg 1154 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 470 gtagcacagctcgaacggggccac 493 |||||||||||||||||| ||||| Sbjct: 875 gtagcacagctcgaacggcgccac 852
>ref|NM_190072.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1260 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 262 tgttctccatctggaaccctccgatcaccaccgccggcg 300 |||||||||||||||||||||||| | ||||||||||| Sbjct: 1162 tgttctccatctggaaccctccgaggatcaccgccggcg 1124 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 167 cttggtgaaattgaagttgctgca 190 |||||||||||||||||| ||||| Sbjct: 1251 cttggtgaaattgaagttactgca 1228
>dbj|AK105806.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-B07, full insert sequence Length = 1404 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 262 tgttctccatctggaaccctccgatcaccaccgccggcg 300 |||||||||||||||||||||||| | ||||||||||| Sbjct: 1174 tgttctccatctggaaccctccgaggatcaccgccggcg 1136 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 167 cttggtgaaattgaagttgctgca 190 |||||||||||||||||| ||||| Sbjct: 1263 cttggtgaaattgaagttactgca 1240
>gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0006J12, complete sequence Length = 157069 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 470 gtagcacagctcgaacggggccacggccg 498 |||||||||||||||||| |||||||||| Sbjct: 91978 gtagcacagctcgaacggtgccacggccg 91950 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 470 gtagcacagctcgaacggggccacggccg 498 ||||||||||| |||||| |||||||||| Sbjct: 89482 gtagcacagcttgaacggagccacggccg 89454
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 470 gtagcacagctcgaacggggccacggccg 498 |||||||||||||||||| |||||||||| Sbjct: 15505793 gtagcacagctcgaacggcgccacggccg 15505765
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 470 gtagcacagctcgaacggggccacggccg 498 |||||||||||||||||| |||||||||| Sbjct: 19491266 gtagcacagctcgaacggtgccacggccg 19491238 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 470 gtagcacagctcgaacggggccacggccg 498 ||||||||||| |||||| |||||||||| Sbjct: 19488770 gtagcacagcttgaacggagccacggccg 19488742 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 76 agtaaattttatttcctttat 96 ||||||||||||||||||||| Sbjct: 19108814 agtaaattttatttcctttat 19108794
>dbj|AP005886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0689B09 Length = 144932 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 470 gtagcacagctcgaacggggccacggccg 498 |||||||||||||||||| |||||||||| Sbjct: 26648 gtagcacagctcgaacggcgccacggccg 26620
>dbj|AP005568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1299_A11 Length = 160099 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 470 gtagcacagctcgaacggggccacggccg 498 |||||||||||||||||| |||||||||| Sbjct: 155085 gtagcacagctcgaacggcgccacggccg 155057
>gb|AC022268.5| Homo sapiens BAC clone RP11-494K17 from 12, complete sequence Length = 192952 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Minus Query: 80 aattttatttcctttattttttca 103 |||||||||||||||||||||||| Sbjct: 109336 aattttatttcctttattttttca 109313
>gb|AC078822.28| Homo sapiens 12 BAC RP11-216I5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 166825 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Plus Query: 80 aattttatttcctttattttttca 103 |||||||||||||||||||||||| Sbjct: 47489 aattttatttcctttattttttca 47512
>dbj|AK111477.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-185-A02, full insert sequence Length = 1075 Score = 48.1 bits (24), Expect = 0.029 Identities = 36/40 (90%) Strand = Plus / Plus Query: 261 ttgttctccatctggaaccctccgatcaccaccgccggcg 300 ||||||||||||||||| |||||||| || | |||||||| Sbjct: 183 ttgttctccatctggaaacctccgatgacaatcgccggcg 222
>dbj|AK063356.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-C06, full insert sequence Length = 1372 Score = 48.1 bits (24), Expect = 0.029 Identities = 36/40 (90%) Strand = Plus / Minus Query: 261 ttgttctccatctggaaccctccgatcaccaccgccggcg 300 ||||||||||||||||| |||||||| || | |||||||| Sbjct: 1219 ttgttctccatctggaaacctccgatgacaatcgccggcg 1180
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Plus Query: 292 ccgccggcgtcgcgcccgtgctgc 315 |||||||||||||||||||||||| Sbjct: 2251581 ccgccggcgtcgcgcccgtgctgc 2251604
>ref|NM_100205.3| Arabidopsis thaliana unknown protein AT1G03230 mRNA, complete cds Length = 1502 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 266 ctccatctggaaccctccgatcaccac 292 ||||| ||||||||||||||||||||| Sbjct: 1216 ctccaactggaaccctccgatcaccac 1190
>gb|AC117246.3| Mus musculus BAC clone RP24-317G19 from 17, complete sequence Length = 174227 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 81 attttatttcctttattttttca 103 ||||||||||||||||||||||| Sbjct: 117613 attttatttcctttattttttca 117591
>gb|AC005278.2|F15K9 Arabidopsis thaliana chromosome 1 BAC F15K9 sequence, complete sequence Length = 71097 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 266 ctccatctggaaccctccgatcaccac 292 ||||| ||||||||||||||||||||| Sbjct: 45090 ctccaactggaaccctccgatcaccac 45116
>gb|AF332411.1| Arabidopsis thaliana clone C00068 (m) unknown protein (At1g03230) mRNA, complete cds Length = 1338 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 266 ctccatctggaaccctccgatcaccac 292 ||||| ||||||||||||||||||||| Sbjct: 1197 ctccaactggaaccctccgatcaccac 1171
>gb|AC009534.9|AC009534 Drosophila melanogaster, chromosome 2L, region 27F-27F, BAC clone BACR01E19, complete sequence Length = 161009 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 78 taaattttatttcctttattttt 100 ||||||||||||||||||||||| Sbjct: 1567 taaattttatttcctttattttt 1545
>emb|BX815134.1|CNS0ABJA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS37ZB05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1402 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 266 ctccatctggaaccctccgatcaccac 292 ||||| ||||||||||||||||||||| Sbjct: 1194 ctccaactggaaccctccgatcaccac 1168
>emb|BX815036.1|CNS0ABER Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS26ZF05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1408 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 266 ctccatctggaaccctccgatcaccac 292 ||||| ||||||||||||||||||||| Sbjct: 1215 ctccaactggaaccctccgatcaccac 1189
>gb|AC012675.5|AC012675 Drosophila melanogaster, chromosome 2L, region 27C-27C, BAC clone BACR10E07, complete sequence Length = 176818 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 78 taaattttatttcctttattttt 100 ||||||||||||||||||||||| Sbjct: 172641 taaattttatttcctttattttt 172619
>gb|AE003616.2| Drosophila melanogaster chromosome 2L, section 25 of 83 of the complete sequence Length = 267997 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 78 taaattttatttcctttattttt 100 ||||||||||||||||||||||| Sbjct: 225866 taaattttatttcctttattttt 225844
>gb|AC158957.2| Mus musculus chromosome 15, clone RP23-27P5, complete sequence Length = 187390 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 80 aattttatttcctttatttttt 101 |||||||||||||||||||||| Sbjct: 72178 aattttatttcctttatttttt 72157
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 80 aattttatttcctttatttttt 101 |||||||||||||||||||||| Sbjct: 24269504 aattttatttcctttatttttt 24269525
>gb|AC120505.7| Oryza sativa chromosome 3 BAC OSJNBa0066H15 genomic sequence, complete sequence Length = 171664 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 80 aattttatttcctttatttttt 101 |||||||||||||||||||||| Sbjct: 111120 aattttatttcctttatttttt 111099
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 487 gggccacggccgcgaccttggc 508 |||||||||||||||||||||| Sbjct: 2634417 gggccacggccgcgaccttggc 2634396
>emb|AL033527.26|HS118J21 Human DNA sequence from clone RP1-118J21 on chromosome 1p34.1-35.3 Contains the 5' end of the BMP8B gene for bone morphogenetic protein 8b (osteogenic protein 2), the 3' end of the PPIE gene for peptidylprolyl isomerase E (cyclophilin E), the OXCT2 gene for 3-oxoacid CoA transferase 2, the gene for tRNA isopentenyltransferase 1 (IPT), the MYCL1 gene for v-myc myelocytomatosis viral oncogene homolog 1 lung carcinoma derived (avian), a novel gene and seven CpG islands, complete sequence Length = 166496 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 81 attttatttcctttattttttc 102 |||||||||||||||||||||| Sbjct: 146738 attttatttcctttattttttc 146759
>gb|AC154646.2| Mus musculus BAC clone RP23-283B12 from chromosome 14, complete sequence Length = 189102 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 78 taaattttatttcctttattttttca 103 ||||||||||| |||||||||||||| Sbjct: 24137 taaattttattgcctttattttttca 24112
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 80 aattttatttcctttatttttt 101 |||||||||||||||||||||| Sbjct: 24186973 aattttatttcctttatttttt 24186994
>gb|AC093730.3| Homo sapiens BAC clone RP11-12K22 from 4, complete sequence Length = 158566 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 81 attttatttcctttattttttc 102 |||||||||||||||||||||| Sbjct: 147360 attttatttcctttattttttc 147381
>gb|AC100269.7| Mus musculus chromosome 5, clone RP23-67B9, complete sequence Length = 237273 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 78 taaattttatttcctttattt 98 ||||||||||||||||||||| Sbjct: 201796 taaattttatttcctttattt 201816
>gb|AC132483.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0014C03, complete sequence Length = 143739 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 76 agtaaattttatttcctttat 96 ||||||||||||||||||||| Sbjct: 121457 agtaaattttatttcctttat 121437
>gb|AC134932.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0092G21, complete sequence Length = 151267 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 76 agtaaattttatttcctttat 96 ||||||||||||||||||||| Sbjct: 30712 agtaaattttatttcctttat 30692
>gb|AC146548.11| Medicago truncatula clone mth2-2p3, complete sequence Length = 129327 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 80 aattttatttcctttattttttcaa 104 ||||||||||||||| ||||||||| Sbjct: 89548 aattttatttccttttttttttcaa 89572
>emb|CR383667.11| Zebrafish DNA sequence from clone CH211-229P19 in linkage group 10, complete sequence Length = 121560 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 118 cacacacagcatgcatgcaacaaac 142 ||||||||||||||||||| ||||| Sbjct: 57123 cacacacagcatgcatgcatcaaac 57147
>emb|AL135790.7| Human DNA sequence from clone RP11-87N24 on chromosome 9p22.1-23 Contains a ribosomal protein S12 (RPS12) pseudogene, 2 novel genes, the 5' end of a variant of the PTPRD gene for protein tyrosine phosphatase, receptor type, D (HPTP, PTPD, HPTPD). and a CpG island, complete sequence Length = 176273 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 80 aattttatttcctttattttt 100 ||||||||||||||||||||| Sbjct: 124769 aattttatttcctttattttt 124749
>emb|AL024458.1|HS344I7 Human DNA sequence from clone RP3-344I7 on chromosome Xp11.21-11.3 Contains a keratin 8 (KRT8) pseudogene, complete sequence Length = 99848 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 ttttatttcctttattttttc 102 ||||||||||||||||||||| Sbjct: 21580 ttttatttcctttattttttc 21560
>emb|CR376829.10| Zebrafish DNA sequence from clone CH211-218I18 in linkage group 8, complete sequence Length = 197983 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 81 attttatttcctttatttttt 101 ||||||||||||||||||||| Sbjct: 90564 attttatttcctttatttttt 90584
>gb|AC009835.14| Homo sapiens chromosome 18, clone RP11-413I9, complete sequence Length = 157979 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 79 aaattttatttcctttattttttca 103 ||||||||||| ||||||||||||| Sbjct: 106256 aaattttatttactttattttttca 106232
>emb|BX663519.12| Zebrafish DNA sequence from clone DKEY-182M1 in linkage group 15, complete sequence Length = 164720 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 92 tttattttttcaacataaagccctg 116 |||||||| |||||||||||||||| Sbjct: 133288 tttattttatcaacataaagccctg 133312
>gb|AC115007.6| Mus musculus chromosome 5, clone RP24-188P11, complete sequence Length = 155084 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 78 taaattttatttcctttattt 98 ||||||||||||||||||||| Sbjct: 89541 taaattttatttcctttattt 89561
>gb|AC097481.3| Homo sapiens BAC clone RP11-125F12 from 4, complete sequence Length = 103566 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 80 aattttatttcctttattttt 100 ||||||||||||||||||||| Sbjct: 35686 aattttatttcctttattttt 35666
>gb|AC078878.20| Homo sapiens 12 BAC RP11-983C2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 172393 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 77 gtaaattttatttcctttatttttt 101 |||||||||||||||||| |||||| Sbjct: 24630 gtaaattttatttcctttttttttt 24606
>dbj|AK070554.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061A08, full insert sequence Length = 1474 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 470 gtagcacagctcgaacggggccacggccg 498 ||||||||||| |||||| |||||||||| Sbjct: 1050 gtagcacagcttgaacggagccacggccg 1022
>emb|CR318631.5| Zebrafish DNA sequence from clone DKEY-207D5 in linkage group 18, complete sequence Length = 189711 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 171 gtgaaattgaagttgctgcag 191 ||||||||||||||||||||| Sbjct: 5537 gtgaaattgaagttgctgcag 5517
>emb|BX649507.3| Zebrafish DNA sequence from clone CH211-154H20 in linkage group 18, complete sequence Length = 166185 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 171 gtgaaattgaagttgctgcag 191 ||||||||||||||||||||| Sbjct: 148915 gtgaaattgaagttgctgcag 148935
>dbj|AP006305.1| Homo sapiens genomic DNA, chromosome 8 clone:RP11-53M8, complete sequence Length = 185588 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 75 tagtaaattttatttcctttatttt 99 |||| |||||||||||||||||||| Sbjct: 15358 tagttaattttatttcctttatttt 15334
>dbj|AP006301.1| Homo sapiens genomic DNA, chromosome 8 clone:RP11-139F6, complete sequence Length = 163604 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 75 tagtaaattttatttcctttatttt 99 |||| |||||||||||||||||||| Sbjct: 99885 tagttaattttatttcctttatttt 99861
>gb|AC171647.3| Rhesus Macaque BAC CH250-482O21 (Children's Hospital Oakland Research Institute Rhesus macaque Adult Male BAC Library) complete sequence Length = 123862 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 79 aaattttatttcctttattttttca 103 ||||||||||| ||||||||||||| Sbjct: 11897 aaattttatttgctttattttttca 11921
>gb|AC140323.3| Mus musculus BAC clone RP24-325G15 from 3, complete sequence Length = 182942 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 80 aattttatttcctttattttt 100 ||||||||||||||||||||| Sbjct: 55294 aattttatttcctttattttt 55274
>gb|AC092818.4| Homo sapiens chromosome 8, clone RP11-419C23, complete sequence Length = 175100 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 75 tagtaaattttatttcctttatttt 99 |||| |||||||||||||||||||| Sbjct: 116846 tagttaattttatttcctttatttt 116870
>emb|AL672303.5| Mouse DNA sequence from clone RP23-461A6 on chromosome X, complete sequence Length = 200875 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 78 taaattttatttcctttattt 98 ||||||||||||||||||||| Sbjct: 142509 taaattttatttcctttattt 142489
>emb|AL671975.12| Mouse DNA sequence from clone RP23-25O15 on chromosome X, complete sequence Length = 231530 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 116 ggcacacacagcatgcatgca 136 ||||||||||||||||||||| Sbjct: 2327 ggcacacacagcatgcatgca 2307
>dbj|AP000073.1| Homo sapiens genomic DNA, chromosome 8p11.2, senescence gene region, section 9/19, complete sequence Length = 100000 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 75 tagtaaattttatttcctttatttt 99 |||| |||||||||||||||||||| Sbjct: 20188 tagttaattttatttcctttatttt 20212
>gb|AC118213.8| Mus musculus chromosome 1, clone RP24-529B23, complete sequence Length = 133485 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 tagtaaattttatttccttt 94 |||||||||||||||||||| Sbjct: 82151 tagtaaattttatttccttt 82132
>gb|AC150426.3| Branchiostoma floridae clone CH302-83B17, complete sequence Length = 192173 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 78 taaattttatttcctttatttttt 101 |||||||| ||||||||||||||| Sbjct: 111873 taaattttctttcctttatttttt 111896
>ref|XM_528666.1| PREDICTED: Pan troglodytes similar to KIAA1076 protein (LOC473295), mRNA Length = 6018 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 gagccccctgccagggaggt 213 |||||||||||||||||||| Sbjct: 3808 gagccccctgccagggaggt 3827
>ref|NM_196304.1| Oryza sativa (japonica cultivar-group) putative lipase (OSJNBa0011L09.26), mRNA Length = 1230 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 378 ccgcccaccgagaagttcgtcccg 401 |||||||||| ||||||||||||| Sbjct: 386 ccgcccaccgcgaagttcgtcccg 363
>gb|AC161807.12| Mus musculus chromosome 1, clone RP24-229G16, complete sequence Length = 144324 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tttatttcctttattttttc 102 |||||||||||||||||||| Sbjct: 65446 tttatttcctttattttttc 65427
>ref|NM_190073.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1209 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 467 gttgtagcacagctcgaacggggccacg 494 |||| |||| |||||||||||||||||| Sbjct: 909 gttgaagcagagctcgaacggggccacg 882
>ref|NM_190067.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1305 Score = 40.1 bits (20), Expect = 7.0 Identities = 47/56 (83%) Strand = Plus / Minus Query: 245 gtcgagcaccaccagcttgttctccatctggaaccctccgatcaccaccgccggcg 300 ||||| ||||||||| |||| ||||||||| ||| ||||| | ||||||||||| Sbjct: 1197 gtcgaacaccaccaggttgtcctccatctgatgcccgccgatgatcaccgccggcg 1142
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 atcaccaccgccggcgtcgc 304 |||||||||||||||||||| Sbjct: 1500169 atcaccaccgccggcgtcgc 1500188
>gb|DQ452068.1| Homo sapiens lipoprotein, Lp(a) (LPA) gene, complete cds Length = 136345 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 attttatttcctttattttt 100 |||||||||||||||||||| Sbjct: 12480 attttatttcctttattttt 12499
>ref|XM_716674.1| Candida albicans SC5314 putative regulator of polarized morphogenesis Tao3p fragment (CaO19_1693), mRNA Length = 6942 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 atttcctttattttttcaac 105 |||||||||||||||||||| Sbjct: 5054 atttcctttattttttcaac 5035
>gb|AC108802.15| Mus musculus chromosome 12, clone RP23-220J1, complete sequence Length = 175510 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 ttagtagtaaattttatttc 90 |||||||||||||||||||| Sbjct: 136566 ttagtagtaaattttatttc 136547
>gb|AC146437.3| Pan troglodytes BAC clone RP43-15J3 from 7, complete sequence Length = 163637 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 ttagtagtaaattttatttc 90 |||||||||||||||||||| Sbjct: 32713 ttagtagtaaattttatttc 32732
>ref|XM_900968.2| PREDICTED: Mus musculus similar to Poly(A) binding protein, cytoplasmic 4, isoform 1, transcript variant 3 (LOC544782), mRNA Length = 2495 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 aaattttatttcctttattt 98 |||||||||||||||||||| Sbjct: 2474 aaattttatttcctttattt 2455
>ref|XM_900973.2| PREDICTED: Mus musculus similar to Poly(A) binding protein, cytoplasmic 4, isoform 1, transcript variant 4 (LOC544782), mRNA Length = 2459 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 aaattttatttcctttattt 98 |||||||||||||||||||| Sbjct: 2438 aaattttatttcctttattt 2419
>ref|XM_900979.2| PREDICTED: Mus musculus similar to Poly(A) binding protein, cytoplasmic 4, isoform 1, transcript variant 5 (LOC544782), mRNA Length = 2525 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 aaattttatttcctttattt 98 |||||||||||||||||||| Sbjct: 2504 aaattttatttcctttattt 2485
>ref|XM_893653.2| PREDICTED: Mus musculus similar to Poly(A) binding protein, cytoplasmic 4, isoform 1, transcript variant 2 (LOC544782), mRNA Length = 2597 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 aaattttatttcctttattt 98 |||||||||||||||||||| Sbjct: 2576 aaattttatttcctttattt 2557
>ref|XM_900938.2| PREDICTED: Mus musculus similar to poly(A) binding protein, cytoplasmic 4 isoform 1, transcript variant 2 (LOC624424), mRNA Length = 2495 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 aaattttatttcctttattt 98 |||||||||||||||||||| Sbjct: 2474 aaattttatttcctttattt 2455
>ref|XM_900940.2| PREDICTED: Mus musculus similar to poly(A) binding protein, cytoplasmic 4 isoform 1, transcript variant 3 (LOC624424), mRNA Length = 2459 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 aaattttatttcctttattt 98 |||||||||||||||||||| Sbjct: 2438 aaattttatttcctttattt 2419
>ref|XM_900943.2| PREDICTED: Mus musculus similar to poly(A) binding protein, cytoplasmic 4 isoform 1, transcript variant 4 (LOC624424), mRNA Length = 2525 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 aaattttatttcctttattt 98 |||||||||||||||||||| Sbjct: 2504 aaattttatttcctttattt 2485
>ref|XM_484034.4| PREDICTED: Mus musculus similar to poly(A) binding protein, cytoplasmic 4 isoform 1, transcript variant 1 (LOC624424), mRNA Length = 2597 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 aaattttatttcctttattt 98 |||||||||||||||||||| Sbjct: 2576 aaattttatttcctttattt 2557
>ref|XM_900897.2| PREDICTED: Mus musculus similar to poly(A) binding protein, cytoplasmic 4 isoform 1, transcript variant 2 (LOC624403), mRNA Length = 2459 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 aaattttatttcctttattt 98 |||||||||||||||||||| Sbjct: 2438 aaattttatttcctttattt 2419
>ref|XM_893523.2| PREDICTED: Mus musculus similar to poly(A) binding protein, cytoplasmic 4 isoform 1, transcript variant 1 (LOC624403), mRNA Length = 2594 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 aaattttatttcctttattt 98 |||||||||||||||||||| Sbjct: 2573 aaattttatttcctttattt 2554
>gb|AC004451.2| Homo sapiens PAC clone RP4-789N1 from 7, complete sequence Length = 108642 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 ttagtagtaaattttatttc 90 |||||||||||||||||||| Sbjct: 37972 ttagtagtaaattttatttc 37991
>ref|XM_838383.1| Leishmania major strain Friedlin hypothetical protein (LMJ_1300) partial mRNA Length = 1026 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 atcaccaccgccggcgtcgc 304 |||||||||||||||||||| Sbjct: 93 atcaccaccgccggcgtcgc 74
>emb|AJ697849.1| Triticum aestivum partial xi-IIA gene for xylanase inhibitor precursor, exon 1 Length = 1170 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 470 gtagcacagctcgaacggggccac 493 |||||||||||||||||| ||||| Sbjct: 855 gtagcacagctcgaacggcgccac 832
>gb|AC122226.3| Mus musculus BAC clone RP23-131F7 from 5, complete sequence Length = 193861 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 gcacacacagcatgcatgca 136 |||||||||||||||||||| Sbjct: 6816 gcacacacagcatgcatgca 6835
>ref|XM_721396.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY00725) partial mRNA Length = 1851 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 78 taaattttatttcctttatttttt 101 |||||||| ||||||||||||||| Sbjct: 1417 taaattttctttcctttatttttt 1394
>ref|XM_726222.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY03319) partial mRNA Length = 4491 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 ttttatttcctttatttttt 101 |||||||||||||||||||| Sbjct: 1654 ttttatttcctttatttttt 1635
>ref|XM_739551.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000196.05.0) partial mRNA Length = 1662 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 78 taaattttatttcctttatttttt 101 |||||||| ||||||||||||||| Sbjct: 1228 taaattttctttcctttatttttt 1205
>ref|XM_664119.1| Plasmodium berghei strain ANKA hypothetical protein (PB300972.00.0) partial mRNA Length = 603 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 78 taaattttatttcctttatttttt 101 |||||||| ||||||||||||||| Sbjct: 385 taaattttctttcctttatttttt 362
>ref|XM_670554.1| Plasmodium berghei strain ANKA Ser/Thr protein kinase (PB000582.03.0) partial mRNA Length = 2790 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 ttttatttcctttatttttt 101 |||||||||||||||||||| Sbjct: 1615 ttttatttcctttatttttt 1596
>gb|AC161399.2| Medicago truncatula chromosome 2 BAC clone mte1-30k4, complete sequence Length = 172016 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 aattttatttcctttatttt 99 |||||||||||||||||||| Sbjct: 143513 aattttatttcctttatttt 143494
>gb|AC117212.5| Mus musculus BAC clone RP23-302A24 from chromosome 6, complete sequence Length = 212735 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 aaagccctggcacacacagc 127 |||||||||||||||||||| Sbjct: 63506 aaagccctggcacacacagc 63525
>emb|Z96811.2|HS52D1 Human DNA sequence from clone RP1-52D1 on chromosome Xq21, complete sequence Length = 148691 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 attttatttcctttattttt 100 |||||||||||||||||||| Sbjct: 44296 attttatttcctttattttt 44277
>emb|AL670379.17| Human DNA sequence from clone RP6-166C19 on chromosome X Contains the gene for a novel protein similar to Proliferation-associated protein 2G4 (Cell cycle protein p38-2G4 homolog) (hG4-1) (LOC347458), ten copies of the gene for a novel protein similar to LOC347458, the 5' end of the gene for a novel protein similar to LOC347458 and twelve CpG islands, complete sequence Length = 75160 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 taaattttatttcctttatt 97 |||||||||||||||||||| Sbjct: 70077 taaattttatttcctttatt 70096
>emb|AL591215.12| Human DNA sequence from clone RP11-20D12 on chromosome 9 Contains the 3' end of a novel gene, possible ortholog of mouse RIKEN cDNA 1700028P14 gene, complete sequence Length = 154592 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 attttatttcctttattttttcaa 104 |||||||||| ||||||||||||| Sbjct: 55426 attttatttcttttattttttcaa 55403
>emb|AL583808.6| Human DNA sequence from clone RP11-262K1 on chromosome 1 Contains a novel gene, complete sequence Length = 174642 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 attttatttcctttattttt 100 |||||||||||||||||||| Sbjct: 114259 attttatttcctttattttt 114278
>emb|AL391845.49| Human DNA sequence from clone RP11-547D24 on chromosome 1 Contains the 3' end of a novel gene (LOC339459), the GABRD gene for gamma-aminobutyric acid (GABA) A receptor delta, two novel genes the 5' end of the PRKCZ gene for protein kinase C, zeta and seven CpG islands, complete sequence Length = 132884 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 gcacacacagcatgcatgca 136 |||||||||||||||||||| Sbjct: 82067 gcacacacagcatgcatgca 82048
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 cccgaccggacgaacgcgaa 337 |||||||||||||||||||| Sbjct: 298955 cccgaccggacgaacgcgaa 298936
>emb|AL353710.7| Human DNA sequence from clone RP11-470P4 on chromosome 9 Contains a novel gene, the 5' end of the CHAC gene for chorea acanthocytosis and a CpG island, complete sequence Length = 110633 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 attttatttcctttattttt 100 |||||||||||||||||||| Sbjct: 29752 attttatttcctttattttt 29733
>emb|AL109933.25|HSDJ81D8 Human DNA sequence from clone RP1-81D8 on chromosome 6q25.3-26 Contains the PLG gene for plasminogen, the 5' end of the LPA gene for lipoprotein (Lp(a)), a novel gene, a pseudogene similar to part of plasminogen and a CpG island, complete sequence Length = 163599 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 attttatttcctttattttt 100 |||||||||||||||||||| Sbjct: 4745 attttatttcctttattttt 4726
>emb|AL078582.13|HSDJ130E4 Human DNA sequence from clone RP1-130E4 on chromosome 6q24.2-25.3 Contains the 3' end of the ESR1 gene for estrogen receptor 1, the 3' end of the synaptic nuclei expressed gene 1b (SYNE-1) (nesprin-1 beta, MYNE1, SYNE1, KIAA0796), complete sequence Length = 108893 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 83 tttatttcctttattttttcaaca 106 |||||||||||||||| ||||||| Sbjct: 87400 tttatttcctttatttattcaaca 87377
>emb|AL032819.32|HS312E8 Human DNA sequence from clone LA16c-312E8 on chromosome 16, complete sequence Length = 34068 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 tttcctttattttttcaaca 106 |||||||||||||||||||| Sbjct: 6097 tttcctttattttttcaaca 6078
>emb|AL034562.3|HS684O24 Human DNA sequence from clone RP4-684O24 on chromosome 20p12.2-13 Contains the 3' part of the PTPNS1 gene for protein tyrosine phosphatase,non-receptor type substrate 1 and the PDYN gene for prodynorphin (Beta-Neoendorphin-Dynorphin precursor, Proenkephalin B precursor) genomic marker D20S179 and a CA repeat polymorphism, complete sequence Length = 103933 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 acataaagccctggcacaca 123 |||||||||||||||||||| Sbjct: 45991 acataaagccctggcacaca 45972
>gb|BT009260.1| Triticum aestivum clone wlk4.pk0017.d2:fis, full insert mRNA sequence Length = 1343 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 470 gtagcacagctcgaacggggccac 493 |||||||||||||||||| ||||| Sbjct: 433 gtagcacagctcgaacggcgccac 456
>emb|CR318645.2| Zebrafish DNA sequence from clone CH211-161F7 in linkage group 11, complete sequence Length = 138050 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 attttatttcctttattttt 100 |||||||||||||||||||| Sbjct: 29632 attttatttcctttattttt 29613
>emb|X59720.2|SCCHRIII S.cerevisiae chromosome III complete DNA sequence Length = 316613 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 ttttatttcctttatttttt 101 |||||||||||||||||||| Sbjct: 41734 ttttatttcctttatttttt 41753
>emb|BX572601.1| Rhodopseudomonas palustris CGA009 complete genome; segment 9/16 Length = 348580 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 tgtcgagcaccaccagcttg 263 |||||||||||||||||||| Sbjct: 38106 tgtcgagcaccaccagcttg 38087
>gb|AC162038.6| Mus musculus 6 BAC RP24-576J4 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 175787 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 gcacacacagcatgcatgca 136 |||||||||||||||||||| Sbjct: 148391 gcacacacagcatgcatgca 148410
>emb|AL596386.16| Mouse DNA sequence from clone RP23-331I21 on chromosome 11 Contains the 3' end of the Myo15 gene for myosin XV, a novel gene, eleven ubiquitin pseudogenes, four poly A binding protein, cytoplasmic 4 (Pabpc4) pseudogenes and a CpG island, complete sequence Length = 201663 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 aaattttatttcctttattt 98 |||||||||||||||||||| Sbjct: 197938 aaattttatttcctttattt 197957 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 aaattttatttcctttattt 98 |||||||||||||||||||| Sbjct: 184899 aaattttatttcctttattt 184918 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 aaattttatttcctttattt 98 |||||||||||||||||||| Sbjct: 146806 aaattttatttcctttattt 146825
>gb|AC123298.4| Rattus norvegicus BAC CH230-352N4 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 175621 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 aattggatttagtagtaaat 82 |||||||||||||||||||| Sbjct: 125917 aattggatttagtagtaaat 125936
>emb|AL663103.4| Mouse DNA sequence from clone RP23-267D13 on chromosome 11, complete sequence Length = 238478 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 ttttatttcctttatttttt 101 |||||||||||||||||||| Sbjct: 2563 ttttatttcctttatttttt 2582
>emb|BX537880.1|HSM805986 Homo sapiens genomic DNA; cDNA DKFZp686C03114 (from clone DKFZp686C03114) Length = 5755 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 aattgaagttgctgcaggtg 194 |||||||||||||||||||| Sbjct: 30 aattgaagttgctgcaggtg 11
>gb|AC008479.6| Homo sapiens chromosome 5 clone CTC-392L24, complete sequence Length = 176691 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 attttatttcctttattttt 100 |||||||||||||||||||| Sbjct: 201 attttatttcctttattttt 182
>gb|AC091734.3| Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0068A07, from Chromosome 10, complete sequence Length = 154505 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 378 ccgcccaccgagaagttcgtcccg 401 |||||||||| ||||||||||||| Sbjct: 110385 ccgcccaccgcgaagttcgtcccg 110362
>gb|AE006467.1| Homo sapiens 16p13.3 sequence section 6 of 8 Length = 279011 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 tttcctttattttttcaaca 106 |||||||||||||||||||| Sbjct: 81860 tttcctttattttttcaaca 81841
>gb|AC066616.7| Homo sapiens chromosome 15 clone RP11-925D8 map 15q21.3, complete sequence Length = 209779 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 aattgaagttgctgcaggtg 194 |||||||||||||||||||| Sbjct: 204120 aattgaagttgctgcaggtg 204139
>gb|AC092316.5| Homo sapiens chromosome 19 clone LLNLR-309F9, complete sequence Length = 36246 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 tttatttcctttattttttc 102 |||||||||||||||||||| Sbjct: 20327 tttatttcctttattttttc 20346
>gb|AC010024.5| Drosophila melanogaster 3L BAC RP98-26E20 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 181004 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 tatttcctttattttttcaa 104 |||||||||||||||||||| Sbjct: 91432 tatttcctttattttttcaa 91451
>gb|AC115393.5| Rattus norvegicus BAC CH230-103E13 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 243316 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 aattggatttagtagtaaat 82 |||||||||||||||||||| Sbjct: 13003 aattggatttagtagtaaat 13022
>gb|AC009379.7| Drosophila melanogaster 3L BAC RP98-48M6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 175963 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 ttttatttcctttatttttt 101 |||||||||||||||||||| Sbjct: 58375 ttttatttcctttatttttt 58356
>gb|AC146750.32| Medicago truncatula clone mth2-16o6, complete sequence Length = 114206 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 attttatttcctttattttt 100 |||||||||||||||||||| Sbjct: 97545 attttatttcctttattttt 97564
>gb|AC009378.7| Drosophila melanogaster 3L BAC RP98-9E8 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 180387 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 ttttatttcctttatttttt 101 |||||||||||||||||||| Sbjct: 51914 ttttatttcctttatttttt 51933
>dbj|AK090681.1| Homo sapiens cDNA FLJ33362 fis, clone BRACE2005337 Length = 1807 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 acataaagccctggcacaca 123 |||||||||||||||||||| Sbjct: 994 acataaagccctggcacaca 975
>gb|AC092388.5| Oryza sativa chromosome 10 BAC OSJNBa0011L09 genomic sequence, complete sequence Length = 177565 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 378 ccgcccaccgagaagttcgtcccg 401 |||||||||| ||||||||||||| Sbjct: 173308 ccgcccaccgcgaagttcgtcccg 173331
>gb|AC093830.3| Homo sapiens BAC clone RP11-401G24 from 4, complete sequence Length = 153887 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 attttatttcctttattttt 100 |||||||||||||||||||| Sbjct: 86909 attttatttcctttattttt 86890
>gb|AC008665.6| Homo sapiens chromosome 5 clone CTB-34L8, complete sequence Length = 133329 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 attttatttcctttattttt 100 |||||||||||||||||||| Sbjct: 116674 attttatttcctttattttt 116655
>gb|AC079301.6| Homo sapiens BAC clone RP11-184F13 from 4, complete sequence Length = 153736 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 78 taaattttatttcctttattttttcaac 105 ||||||||| || ||||||||||||||| Sbjct: 86163 taaattttaattgctttattttttcaac 86136
>gb|AC069407.2| Drosophila melanogaster 3L BAC RP98-30I5 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 183714 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 tatttcctttattttttcaa 104 |||||||||||||||||||| Sbjct: 149482 tatttcctttattttttcaa 149463
>gb|AC025470.5| Homo sapiens chromosome 5 clone CTD-2516K3, complete sequence Length = 201687 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 78 taaattttatttcctttatttttt 101 ||||||||||||| |||||||||| Sbjct: 7668 taaattttatttcttttatttttt 7645
>gb|AC161538.7| Mus musculus 6 BAC RP23-1D15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 211933 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 ttttatttcctttatttttt 101 |||||||||||||||||||| Sbjct: 8626 ttttatttcctttatttttt 8607
>gb|AC160148.7| Mus musculus 6 BAC RP23-384N6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 207306 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 ttttatttcctttatttttt 101 |||||||||||||||||||| Sbjct: 83500 ttttatttcctttatttttt 83481
>gb|AC145858.5| Pan troglodytes BAC clone RP43-6D19 from chromosome 7, complete sequence Length = 196528 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 ttttatttcctttatttttt 101 |||||||||||||||||||| Sbjct: 173413 ttttatttcctttatttttt 173432
>gb|AC154267.2| Mus musculus BAC clone RP24-227G11 from chromosome 17, complete sequence Length = 181763 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 tggatttagtagtaaatttt 85 |||||||||||||||||||| Sbjct: 75378 tggatttagtagtaaatttt 75359
>emb|AL116975.1|CNS01DLJ Botrytis cinerea strain T4 cDNA library Length = 636 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 cacgtccacgtccggcacca 432 |||||||||||||||||||| Sbjct: 458 cacgtccacgtccggcacca 439
>emb|AL115282.1|CNS01CAI Botrytis cinerea strain T4 cDNA library Length = 480 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 cacgtccacgtccggcacca 432 |||||||||||||||||||| Sbjct: 236 cacgtccacgtccggcacca 217
>emb|AL114319.1|CNS01BJR Botrytis cinerea strain T4 cDNA library Length = 660 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 cacgtccacgtccggcacca 432 |||||||||||||||||||| Sbjct: 493 cacgtccacgtccggcacca 474
>emb|AL112857.1|CNS01AF5 Botrytis cinerea strain T4 cDNA library Length = 720 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 cacgtccacgtccggcacca 432 |||||||||||||||||||| Sbjct: 274 cacgtccacgtccggcacca 255
>emb|AL110710.1|CNS018RJ Botrytis cinerea strain T4 cDNA library Length = 420 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 cacgtccacgtccggcacca 432 |||||||||||||||||||| Sbjct: 214 cacgtccacgtccggcacca 195
>gb|AC009338.12|AC009338 Drosophila melanogaster, chromosome 3R, region 99E-99E, BAC clone BACR08B24, complete sequence Length = 157235 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 atttcctttattttttcaac 105 |||||||||||||||||||| Sbjct: 28123 atttcctttattttttcaac 28104
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 378 ccgcccaccgagaagttcgtcccg 401 |||||||||| ||||||||||||| Sbjct: 12590298 ccgcccaccgcgaagttcgtcccg 12590275
>gb|AC010206.8|AC010206 Homo sapiens 12 BAC RP11-13G14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 171523 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 atttcctttattttttcaac 105 |||||||||||||||||||| Sbjct: 88059 atttcctttattttttcaac 88078
>emb|BX088526.6| Zebrafish DNA sequence from clone CH211-51H9 in linkage group 8, complete sequence Length = 187161 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 tatttcctttattttttcaa 104 |||||||||||||||||||| Sbjct: 152573 tatttcctttattttttcaa 152592
>emb|AJ495752.1|IZN495752 Izeniola n. sp. ND-2002-1 mitochondrial partial 12S rRNA gene Length = 360 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 63 aattggatttagtagtaaatttta 86 ||||||||||| |||||||||||| Sbjct: 251 aattggatttaatagtaaatttta 274
>gb|AC110801.3| Homo sapiens BAC clone RP11-711M9 from 2, complete sequence Length = 81952 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 ttttatttcctttatttttt 101 |||||||||||||||||||| Sbjct: 30719 ttttatttcctttatttttt 30738
>gb|AC084781.2|AC084781 Homo sapiens chromosome 15 clone RP11-355N15 map 15q21.3, complete sequence Length = 173386 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 aattgaagttgctgcaggtg 194 |||||||||||||||||||| Sbjct: 54343 aattgaagttgctgcaggtg 54362
>gb|AC155173.3| Mus musculus BAC clone RP23-72O23 from chromosome 5, complete sequence Length = 245443 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 gcacacacagcatgcatgca 136 |||||||||||||||||||| Sbjct: 45640 gcacacacagcatgcatgca 45621
>gb|AC116550.2| Dictyostelium discoideum chromosome 2 map 375056-387392 strain AX4, complete sequence Length = 12336 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 taaattttatttcctttatt 97 |||||||||||||||||||| Sbjct: 2095 taaattttatttcctttatt 2114
>gb|AC084327.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-367K14, complete sequence Length = 108667 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 aaagccctggcacacacagc 127 |||||||||||||||||||| Sbjct: 26688 aaagccctggcacacacagc 26669
>gb|AC007131.4| Homo sapiens BAC clone RP11-179A20 from 2, complete sequence Length = 160087 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 ttttatttcctttatttttt 101 |||||||||||||||||||| Sbjct: 12666 ttttatttcctttatttttt 12685
>gb|AC099740.2| Takifugu rubripes clone 216J3, complete sequence Length = 64132 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 accagcttgttctccatctg 274 |||||||||||||||||||| Sbjct: 46669 accagcttgttctccatctg 46650
>gb|AC098806.3| Takifugu rubripes clone 208D11, complete sequence Length = 130460 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 accagcttgttctccatctg 274 |||||||||||||||||||| Sbjct: 22363 accagcttgttctccatctg 22344
>gb|CP000084.1| Candidatus Pelagibacter ubique HTCC1062, complete genome Length = 1308759 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 attttatttcctttattttttcaa 104 |||||||||| ||||||||||||| Sbjct: 466683 attttatttcttttattttttcaa 466660
>ref|NM_001011008.1| Xenopus tropicalis hypothetical LOC496417 (LOC496417), mRNA Length = 4006 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 aattttatttcctttatttt 99 |||||||||||||||||||| Sbjct: 2576 aattttatttcctttatttt 2557
>emb|BX004770.12| Zebrafish DNA sequence from clone DKEY-14K21 in linkage group 10, complete sequence Length = 231131 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 81 attttatttcctttattttttcaa 104 |||||||||| ||||||||||||| Sbjct: 141046 attttatttcatttattttttcaa 141069
>dbj|BS000066.1| Pan troglodytes chromosome 22 clone:CH251-126A17, map 22, complete sequences Length = 204847 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 attttatttcctttattttt 100 |||||||||||||||||||| Sbjct: 117158 attttatttcctttattttt 117177
>dbj|AK121597.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033039J24, full insert sequence Length = 1430 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 467 gttgtagcacagctcgaacggggccacg 494 |||| |||| |||||||||||||||||| Sbjct: 968 gttgaagcagagctcgaacggggccacg 941
>emb|AJ327330.1|HSA327330 Homo sapiens genomic sequence surrounding NotI site, clone NL1-GM14R Length = 717 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 acataaagccctggcacaca 123 |||||||||||||||||||| Sbjct: 241 acataaagccctggcacaca 222
>dbj|AK073591.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051M04, full insert sequence Length = 1520 Score = 40.1 bits (20), Expect = 7.0 Identities = 47/56 (83%) Strand = Plus / Minus Query: 245 gtcgagcaccaccagcttgttctccatctggaaccctccgatcaccaccgccggcg 300 ||||| ||||||||| |||| ||||||||| ||| ||||| | ||||||||||| Sbjct: 1211 gtcgaacaccaccaggttgtcctccatctgatgcccgccgatgatcaccgccggcg 1156
>gb|AF063007.3| Caenorhabditis elegans cosmid R119, complete sequence Length = 38976 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 82 ttttatttcctttattttttcaac 105 ||||| |||||||||||||||||| Sbjct: 5364 ttttagttcctttattttttcaac 5387
>gb|AC155330.3| Mus musculus 6 BAC RP24-146L23 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 215602 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 gcacacacagcatgcatgca 136 |||||||||||||||||||| Sbjct: 154044 gcacacacagcatgcatgca 154025
>gb|AE003773.2| Drosophila melanogaster chromosome 3R, section 111 of 118 of the complete sequence Length = 226904 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 atttcctttattttttcaac 105 |||||||||||||||||||| Sbjct: 37862 atttcctttattttttcaac 37843
>gb|AE003562.3| Drosophila melanogaster chromosome 3L, section 23 of 83 of the complete sequence Length = 255329 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 tatttcctttattttttcaa 104 |||||||||||||||||||| Sbjct: 125969 tatttcctttattttttcaa 125950
>gb|AE003518.3| Drosophila melanogaster chromosome 3L, section 67 of 83 of the complete sequence Length = 279088 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 ttttatttcctttatttttt 101 |||||||||||||||||||| Sbjct: 231394 ttttatttcctttatttttt 231413
>gb|CP000021.1| Vibrio fischeri ES114 chromosome II, complete sequence Length = 1332022 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 ttggtgaaattgaagttgct 187 |||||||||||||||||||| Sbjct: 1017418 ttggtgaaattgaagttgct 1017437
>emb|CT009504.11| Mouse DNA sequence from clone RP23-149M9 on chromosome 12, complete sequence Length = 190345 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 ttagtagtaaattttatttc 90 |||||||||||||||||||| Sbjct: 172808 ttagtagtaaattttatttc 172789
>gb|BC082721.1| Xenopus tropicalis hypothetical LOC496417, mRNA (cDNA clone MGC:89107 IMAGE:7006537), complete cds Length = 4006 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 aattttatttcctttatttt 99 |||||||||||||||||||| Sbjct: 2576 aattttatttcctttatttt 2557
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 ccagcatcacgtccacgtcc 425 |||||||||||||||||||| Sbjct: 2396246 ccagcatcacgtccacgtcc 2396227
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 378 ccgcccaccgagaagttcgtcccg 401 |||||||||| ||||||||||||| Sbjct: 12597638 ccgcccaccgcgaagttcgtcccg 12597615
>gb|AC132397.4| Mus musculus BAC clone RP23-397C5 from 5, complete sequence Length = 212387 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 78 taaattttatttcctttatttttt 101 ||||||||||||| |||||||||| Sbjct: 89796 taaattttatttcatttatttttt 89773
>emb|CT030654.8| Mouse DNA sequence from clone RP23-332G16 on chromosome 17, complete sequence Length = 194694 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 tggatttagtagtaaatttt 85 |||||||||||||||||||| Sbjct: 1321 tggatttagtagtaaatttt 1302
>dbj|AP006117.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT09H13, TM0200, complete sequence Length = 91393 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 tttattttttcaacataaag 111 |||||||||||||||||||| Sbjct: 81023 tttattttttcaacataaag 81004
>emb|AL139175.15| Human DNA sequence from clone RP4-615P17 on chromosome 1p13-14.3, complete sequence Length = 103718 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 78 taaattttatttcctttatttttt 101 ||||||||||||||||| |||||| Sbjct: 43527 taaattttatttcctttttttttt 43504
>emb|AL627142.9| Human DNA sequence from clone RP11-632N11 on chromosome X, complete sequence Length = 5573 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 taaattttatttcctttatt 97 |||||||||||||||||||| Sbjct: 484 taaattttatttcctttatt 503
>emb|AL928687.5| Mouse DNA sequence from clone RP23-384L16 on chromosome 2, complete sequence Length = 192096 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 attttatttcctttattttt 100 |||||||||||||||||||| Sbjct: 133695 attttatttcctttattttt 133676
>emb|AL772361.5| Mouse DNA sequence from clone RP23-136C22 on chromosome 2, complete sequence Length = 128685 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 78 taaattttatttcctttatttttt 101 ||||||||||||| |||||||||| Sbjct: 47002 taaattttatttcatttatttttt 46979 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,901,721 Number of Sequences: 3902068 Number of extensions: 4901721 Number of successful extensions: 117033 Number of sequences better than 10.0: 176 Number of HSP's better than 10.0 without gapping: 176 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 116047 Number of HSP's gapped (non-prelim): 984 length of query: 516 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 493 effective length of database: 17,143,297,704 effective search space: 8451645768072 effective search space used: 8451645768072 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
