Clone Name | rbart35h10 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | APX2_ORYSA (Q9FE01) L-ascorbate peroxidase 2, cytosolic (EC 1.11... | 38 | 0.012 | 2 | APX1_ORYSA (P93404) L-ascorbate peroxidase 1, cytosolic (EC 1.11... | 37 | 0.016 | 3 | APX1_ARATH (Q05431) L-ascorbate peroxidase, cytosolic (EC 1.11.1... | 36 | 0.046 | 4 | APX1_PEA (P48534) L-ascorbate peroxidase, cytosolic (EC 1.11.1.1... | 35 | 0.10 | 5 | THA11_MOUSE (Q9JJD0) THAP domain-containing protein 11 | 28 | 7.4 | 6 | THA11_HUMAN (Q96EK4) THAP domain-containing protein 11 | 28 | 7.4 |
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>APX2_ORYSA (Q9FE01) L-ascorbate peroxidase 2, cytosolic (EC 1.11.1.11) (APXb)| Length = 251 Score = 37.7 bits (86), Expect = 0.012 Identities = 19/35 (54%), Positives = 20/35 (57%) Frame = -2 Query: 433 PAFRPLVDKXXXXXXXXXXXXXXAHLKLSELGFGE 329 PAFRPLV+K AHLKLSELGF E Sbjct: 216 PAFRPLVEKYAADEDAFFADYAEAHLKLSELGFAE 250
>APX1_ORYSA (P93404) L-ascorbate peroxidase 1, cytosolic (EC 1.11.1.11) (APXa)| Length = 249 Score = 37.4 bits (85), Expect = 0.016 Identities = 19/36 (52%), Positives = 21/36 (58%) Frame = -2 Query: 433 PAFRPLVDKXXXXXXXXXXXXXXAHLKLSELGFGEA 326 PAFRPLV+K AHLKLSELGF +A Sbjct: 214 PAFRPLVEKYAADEKAFFEDYKEAHLKLSELGFADA 249
>APX1_ARATH (Q05431) L-ascorbate peroxidase, cytosolic (EC 1.11.1.11) (AP)| Length = 249 Score = 35.8 bits (81), Expect = 0.046 Identities = 17/36 (47%), Positives = 20/36 (55%) Frame = -2 Query: 433 PAFRPLVDKXXXXXXXXXXXXXXAHLKLSELGFGEA 326 P FRPLV+K AH+KLSELGF +A Sbjct: 214 PVFRPLVEKYAADEDAFFADYAEAHMKLSELGFADA 249
>APX1_PEA (P48534) L-ascorbate peroxidase, cytosolic (EC 1.11.1.11) (AP)| Length = 249 Score = 34.7 bits (78), Expect = 0.10 Identities = 18/34 (52%), Positives = 19/34 (55%) Frame = -2 Query: 427 FRPLVDKXXXXXXXXXXXXXXAHLKLSELGFGEA 326 FRPLV+K AHLKLSELGF EA Sbjct: 216 FRPLVEKYAADEDVFFADYAEAHLKLSELGFAEA 249
>THA11_MOUSE (Q9JJD0) THAP domain-containing protein 11| Length = 305 Score = 28.5 bits (62), Expect = 7.4 Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 5/56 (8%) Frame = -2 Query: 166 IWIRSVGRWGVALFCF*RLVSCDGPA-CSVN----R*VLCSSFPVVFPCRGRNEKK 14 +W+++V R GV+ CF G CSV+ R P +FP RG NE+K Sbjct: 35 LWLKNVSRAGVS-GCFSTFQPTTGHRLCSVHFQGGRKTYTVRVPTIFPLRGVNERK 89
>THA11_HUMAN (Q96EK4) THAP domain-containing protein 11| Length = 313 Score = 28.5 bits (62), Expect = 7.4 Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 5/56 (8%) Frame = -2 Query: 166 IWIRSVGRWGVALFCF*RLVSCDGPA-CSVN----R*VLCSSFPVVFPCRGRNEKK 14 +W+++V R GV+ CF G CSV+ R P +FP RG NE+K Sbjct: 35 LWLKNVSRAGVS-GCFSTFQPTTGHRLCSVHFQGGRKTYTVRVPTIFPLRGVNERK 89 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,197,257 Number of Sequences: 219361 Number of extensions: 787752 Number of successful extensions: 1999 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1954 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1997 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2511994855 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)