ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart35h06 |
|---|---|
| Clone Library Name | barley_pub |
>LPAT_MAIZE (Q41745) 1-acyl-sn-glycerol-3-phosphate acyltransferase PLS1 (EC| 2.3.1.51) (Phospholipid synthesis protein 1) Length = 374 Score = 177 bits (449), Expect = 2e-44 Identities = 84/108 (77%), Positives = 96/108 (88%) Frame = -2 Query: 566 VSKWCKDIFVAKDALLDRHITTGTFDEEIIPIGRPVKSLMVVLSWSCLLLYGAHRFLQWT 387 VSKWCKDIFVAKDALLD+H+ TGTFDEEI PIGRPVKSL+V L WSCLLL+GA F +WT Sbjct: 267 VSKWCKDIFVAKDALLDKHLATGTFDEEIRPIGRPVKSLLVTLFWSCLLLFGAIEFFKWT 326 Query: 386 QLLSTWKGVILFATGLAMVTAVMHVFIMFSQAERSSSAKAARDRVKRD 243 QLLSTW+GV A G+A+VT VMHVFIMFSQAERSSSA+AAR+RVK++ Sbjct: 327 QLLSTWRGVAFTAAGMALVTGVMHVFIMFSQAERSSSARAARNRVKKE 374
>LPAT2_BRANA (Q9XFW4) 1-acyl-sn-glycerol-3-phosphate acyltransferase 2 (EC| 2.3.1.51) (Lysophosphatidyl acyltransferase 2) Length = 390 Score = 115 bits (289), Expect = 7e-26 Identities = 56/107 (52%), Positives = 76/107 (71%), Gaps = 1/107 (0%) Frame = -2 Query: 566 VSKWCKDIFVAKDALLDRHITTGTFD-EEIIPIGRPVKSLMVVLSWSCLLLYGAHRFLQW 390 +++WC+D FVAKDALLD+HI TF ++ IGRP+KSL VV+SW+CLL GA +FL W Sbjct: 266 IAQWCRDQFVAKDALLDKHIAADTFPGQKEQNIGRPIKSLAVVVSWACLLTLGAMKFLHW 325 Query: 389 TQLLSTWKGVILFATGLAMVTAVMHVFIMFSQAERSSSAKAARDRVK 249 + L S+WKG+ L A GL ++T M + I SQ+ERS+ AK A + K Sbjct: 326 SNLFSSWKGIALSAFGLGIITLCMQILIRSSQSERSTPAKVAPAKPK 372
>LPAT2_ARATH (Q8LG50) 1-acyl-sn-glycerol-3-phosphate acyltransferase 2 (EC| 2.3.1.51) (Lysophosphatidyl acyltransferase 2) Length = 389 Score = 115 bits (288), Expect = 9e-26 Identities = 55/107 (51%), Positives = 75/107 (70%), Gaps = 1/107 (0%) Frame = -2 Query: 566 VSKWCKDIFVAKDALLDRHITTGTFD-EEIIPIGRPVKSLMVVLSWSCLLLYGAHRFLQW 390 +++WC+D FVAKDALLD+HI TF ++ IGRP+KSL VVLSW+C+L GA +FL W Sbjct: 266 IAQWCRDQFVAKDALLDKHIAADTFPGQQEQNIGRPIKSLAVVLSWACVLTLGAIKFLHW 325 Query: 389 TQLLSTWKGVILFATGLAMVTAVMHVFIMFSQAERSSSAKAARDRVK 249 QL S+WKG+ + A GL ++T M + I SQ+ERS+ AK + K Sbjct: 326 AQLFSSWKGITISALGLGIITLCMQILIRSSQSERSTPAKVVPAKPK 372
>LPAT2_BRAOL (Q6IWY1) 1-acyl-sn-glycerol-3-phosphate acyltransferase 2 (EC| 2.3.1.51) (Lysophosphatidyl acyltransferase 2) Length = 391 Score = 108 bits (270), Expect = 1e-23 Identities = 54/107 (50%), Positives = 74/107 (69%), Gaps = 1/107 (0%) Frame = -2 Query: 566 VSKWCKDIFVAKDALLDRHITTGTFD-EEIIPIGRPVKSLMVVLSWSCLLLYGAHRFLQW 390 +++WC+D FVAKDALLD+HI TF ++ I RP+KSL VV+SW+CLL GA +FL W Sbjct: 267 IAQWCRDQFVAKDALLDKHIAADTFPGQKEQNIDRPIKSLAVVVSWACLLTLGAMKFLHW 326 Query: 389 TQLLSTWKGVILFATGLAMVTAVMHVFIMFSQAERSSSAKAARDRVK 249 + L S+ KG+ L A GL ++T M + I SQ+ERS+ AK A + K Sbjct: 327 SNLFSSLKGIALSALGLGIITLCMQILIRSSQSERSTPAKVAPAKPK 373
>LPAT3_ARATH (Q9SYC8) 1-acyl-sn-glycerol-3-phosphate acyltransferase 3 (EC| 2.3.1.51) (Lysophosphatidyl acyltransferase 3) Length = 376 Score = 89.0 bits (219), Expect = 9e-18 Identities = 38/100 (38%), Positives = 66/100 (66%), Gaps = 1/100 (1%) Frame = -2 Query: 566 VSKWCKDIFVAKDALLDRHITTGTF-DEEIIPIGRPVKSLMVVLSWSCLLLYGAHRFLQW 390 +++WC+D+F+ KDA L+++ T F D E+ I RP+K L+VV+ W L++G + LQW Sbjct: 267 IAQWCQDLFITKDAQLEKYFTKDVFSDLEVHQINRPIKPLIVVIIWLGFLVFGGFKLLQW 326 Query: 389 TQLLSTWKGVILFATGLAMVTAVMHVFIMFSQAERSSSAK 270 ++++WK ++LF L + T M + I S+++RS+ AK Sbjct: 327 LSIVASWKIILLFVFFLVIATITMQILIQSSESQRSTPAK 366
>PLCD_RAT (Q924S1) 1-acyl-sn-glycerol-3-phosphate acyltransferase delta (EC| 2.3.1.51) (1-AGP acyltransferase 4) (1-AGPAT 4) (Lysophosphatidic acid acyltransferase-delta) (LPAAT-delta) (1-acylglycerol-3-phosphate O-acyltransferase 4) Length = 378 Score = 36.6 bits (83), Expect = 0.051 Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 1/93 (1%) Frame = -2 Query: 563 SKWCKDIFVAKDALLDRHITTGTFDE-EIIPIGRPVKSLMVVLSWSCLLLYGAHRFLQWT 387 S W ++ KDA + + TG F E +P RP SL+ L W+ LLLY +FL Sbjct: 271 SAWLHKLYQEKDAFQEEYYRTGVFPETPWVPPRRP-WSLVNWLFWASLLLYPFFQFL--V 327 Query: 386 QLLSTWKGVILFATGLAMVTAVMHVFIMFSQAE 288 ++S+ V L + L A M V M E Sbjct: 328 SMVSSGSSVTLASLVLIFCMASMGVRWMIGVTE 360
>PLCD_MOUSE (Q8K4X7) 1-acyl-sn-glycerol-3-phosphate acyltransferase delta (EC| 2.3.1.51) (1-AGP acyltransferase 4) (1-AGPAT 4) (Lysophosphatidic acid acyltransferase-delta) (LPAAT-delta) (1-acylglycerol-3-phosphate O-acyltransferase 4) Length = 378 Score = 36.6 bits (83), Expect = 0.051 Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 1/93 (1%) Frame = -2 Query: 563 SKWCKDIFVAKDALLDRHITTGTFDE-EIIPIGRPVKSLMVVLSWSCLLLYGAHRFLQWT 387 S W ++ KDA + + TG F E +P RP SL+ L W+ LLLY +FL Sbjct: 271 SAWLHKLYQEKDAFQEEYYRTGVFPETPWVPPRRP-WSLVNWLFWASLLLYPFFQFL--V 327 Query: 386 QLLSTWKGVILFATGLAMVTAVMHVFIMFSQAE 288 ++S+ V L + L A M V M E Sbjct: 328 SMVSSGSSVTLASLVLIFCMASMGVRWMIGVTE 360
>PLCD_HUMAN (Q9NRZ5) 1-acyl-sn-glycerol-3-phosphate acyltransferase delta (EC| 2.3.1.51) (1-AGP acyltransferase 4) (1-AGPAT 4) (Lysophosphatidic acid acyltransferase-delta) (LPAAT-delta) (1-acylglycerol-3-phosphate O-acyltransferase 4) Length = 378 Score = 35.0 bits (79), Expect = 0.15 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Frame = -2 Query: 563 SKWCKDIFVAKDALLDRHITTGTFDE-EIIPIGRPVKSLMVVLSWSCLLLYGAHRFL 396 S W ++ KDA + + TGTF E ++P RP +L+ L W+ L+LY +FL Sbjct: 271 SAWLHKLYQEKDAFQEEYYRTGTFPETPMVPPRRP-WTLVNWLFWASLVLYPFFQFL 326
>PALI1_KLULA (Q6CXZ7) pH-response regulator palI/RIM9 homolog 1| Length = 220 Score = 33.1 bits (74), Expect = 0.56 Identities = 18/42 (42%), Positives = 27/42 (64%) Frame = -2 Query: 452 LMVVLSWSCLLLYGAHRFLQWTQLLSTWKGVILFATGLAMVT 327 L+ VLS+ C+L++ L + L+T K V+LFA G +MVT Sbjct: 91 LVHVLSFVCVLVFWLFAILICIKWLNTSKSVLLFAVGWSMVT 132
>VGLB_EHV1V (Q6S6T9) Glycoprotein B precursor (Glycoprotein 14)| Length = 980 Score = 25.4 bits (54), Expect(2) = 9.5 Identities = 9/23 (39%), Positives = 16/23 (69%) Frame = -2 Query: 476 PIGRPVKSLMVVLSWSCLLLYGA 408 P+G+P S + + +CLLL+G+ Sbjct: 58 PLGKPASSRVGTIVLACLLLFGS 80 Score = 21.9 bits (45), Expect(2) = 9.5 Identities = 9/15 (60%), Positives = 10/15 (66%) Frame = -1 Query: 396 TVDPALVNVERSDPL 352 TVDP L+ E DPL Sbjct: 107 TVDPTLLPTETPDPL 121
>VGLB_EHV1D (P25218) Glycoprotein B precursor (Glycoprotein 14)| Length = 980 Score = 25.4 bits (54), Expect(2) = 9.5 Identities = 9/23 (39%), Positives = 16/23 (69%) Frame = -2 Query: 476 PIGRPVKSLMVVLSWSCLLLYGA 408 P+G+P S + + +CLLL+G+ Sbjct: 58 PLGKPASSRVGTIVLACLLLFGS 80 Score = 21.9 bits (45), Expect(2) = 9.5 Identities = 9/15 (60%), Positives = 10/15 (66%) Frame = -1 Query: 396 TVDPALVNVERSDPL 352 TVDP L+ E DPL Sbjct: 107 TVDPTLLPTETPDPL 121
>VGLB_EHV1B (Q6DLH8) Glycoprotein B precursor (Glycoprotein 14)| Length = 980 Score = 25.4 bits (54), Expect(2) = 9.5 Identities = 9/23 (39%), Positives = 16/23 (69%) Frame = -2 Query: 476 PIGRPVKSLMVVLSWSCLLLYGA 408 P+G+P S + + +CLLL+G+ Sbjct: 58 PLGKPASSRVGTIVLACLLLFGS 80 Score = 21.9 bits (45), Expect(2) = 9.5 Identities = 9/15 (60%), Positives = 10/15 (66%) Frame = -1 Query: 396 TVDPALVNVERSDPL 352 TVDP L+ E DPL Sbjct: 107 TVDPTLLPTETPDPL 121
>VGLB_EHV1A (P18551) Glycoprotein B precursor (Glycoprotein 14)| Length = 980 Score = 25.4 bits (54), Expect(2) = 9.5 Identities = 9/23 (39%), Positives = 16/23 (69%) Frame = -2 Query: 476 PIGRPVKSLMVVLSWSCLLLYGA 408 P+G+P S + + +CLLL+G+ Sbjct: 58 PLGKPASSRVGTIVLACLLLFGS 80 Score = 21.9 bits (45), Expect(2) = 9.5 Identities = 9/15 (60%), Positives = 10/15 (66%) Frame = -1 Query: 396 TVDPALVNVERSDPL 352 TVDP L+ E DPL Sbjct: 107 TVDPTLLPTETPDPL 121
>VGLB_EHV1 (P18050) Glycoprotein B precursor (Glycoprotein 14)| Length = 980 Score = 25.4 bits (54), Expect(2) = 9.5 Identities = 9/23 (39%), Positives = 16/23 (69%) Frame = -2 Query: 476 PIGRPVKSLMVVLSWSCLLLYGA 408 P+G+P S + + +CLLL+G+ Sbjct: 58 PLGKPASSRVGTIVLACLLLFGS 80 Score = 21.9 bits (45), Expect(2) = 9.5 Identities = 9/15 (60%), Positives = 10/15 (66%) Frame = -1 Query: 396 TVDPALVNVERSDPL 352 TVDP L+ E DPL Sbjct: 107 TVDPTLLPTETPDPL 121 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 85,770,055 Number of Sequences: 219361 Number of extensions: 1801493 Number of successful extensions: 3935 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 3831 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3929 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4700377760 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
