>emb|AJ234451.1|HVU234451 Hordeum vulgare partial mRNA; clone cMWG0773
          Length = 492

 Score = 71.9 bits (36), Expect = 7e-10
 Identities = 60/68 (88%)
 Strand = Plus / Plus

                                                                       
Query: 116 ccgtccaggctcttggccctgtagtgccggaccaactccgccaccgtcgtgctcctgtac 175
           ||||| |||| |||||||| ||||||||||| || |||| ||||||||| || |||||||
Sbjct: 341 ccgtcgaggcccttggcccggtagtgccggagcagctcctccaccgtcgcgcccctgtac 400

                   
Query: 176 cgcgcgcc 183
           ||||||||
Sbjct: 401 cgcgcgcc 408

>ref|XM_749019.1| Aspergillus fumigatus Af293 hypothetical protein (Afu3g15120)
          partial mRNA
          Length = 372

 Score = 42.1 bits (21), Expect = 0.61
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 68 atgaaagcgagattcattcag 88
          |||||||||||||||||||||
Sbjct: 1  atgaaagcgagattcattcag 21

>ref|NM_187979.1| Oryza sativa (japonica cultivar-group), Ozsa8399 predicted mRNA
          Length = 573

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 152 tccgccaccgtcgtgctcct 171
           ||||||||||||||||||||
Sbjct: 471 tccgccaccgtcgtgctcct 452

>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 165     tgctcctgtaccgcgcgccg 184
               ||||||||||||||||||||
Sbjct: 3132558 tgctcctgtaccgcgcgccg 3132539

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 152     tccgccaccgtcgtgctcct 171
               ||||||||||||||||||||
Sbjct: 8909160 tccgccaccgtcgtgctcct 8909179

>dbj|AP001383.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0453A06
          Length = 154378

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 152   tccgccaccgtcgtgctcct 171
             ||||||||||||||||||||
Sbjct: 16915 tccgccaccgtcgtgctcct 16934

>dbj|AP001366.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0469E09
          Length = 146081

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 152    tccgccaccgtcgtgctcct 171
              ||||||||||||||||||||
Sbjct: 145188 tccgccaccgtcgtgctcct 145207

>emb|BX897719.9| Zebrafish DNA sequence from clone CH211-199I23 in linkage group 13,
              complete sequence
          Length = 216407

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 21     cttcatttcatttattcgtt 40
              ||||||||||||||||||||
Sbjct: 206828 cttcatttcatttattcgtt 206809

>ref|XM_482200.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1131

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                       
Query: 149  aactccgccaccgtcgtgctcctgtac 175
            |||||| || |||||||||||||||||
Sbjct: 1031 aactcccccgccgtcgtgctcctgtac 1005

>ref|XM_482196.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1146

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                       
Query: 149  aactccgccaccgtcgtgctcctgtac 175
            |||||| || |||||||||||||||||
Sbjct: 1049 aactcccccgccgtcgtgctcctgtac 1023

>gb|AC147382.3| Pan troglodytes BAC clone RP43-171M24 from 7, complete sequence
          Length = 198872

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 18    gctcttcatttcatttatt 36
             |||||||||||||||||||
Sbjct: 53908 gctcttcatttcatttatt 53890

>emb|BX470115.19| Zebrafish DNA sequence from clone CH211-234C11 in linkage group 23,
             complete sequence
          Length = 185756

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 17    ggctcttcatttcatttat 35
             |||||||||||||||||||
Sbjct: 76281 ggctcttcatttcatttat 76263



 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 17    ggctcttcatttcatttat 35
             |||||||||||||||||||
Sbjct: 72195 ggctcttcatttcatttat 72177

>gb|AC133646.4| Mus musculus BAC clone RP23-254F11 from chromosome 18, complete sequence
          Length = 209764

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 120    ccaggctcttggccctgta 138
              |||||||||||||||||||
Sbjct: 153889 ccaggctcttggccctgta 153907

>emb|CR378670.1| Photobacterium profundum SS9; segment 8/12
          Length = 348672

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 12     caattggctcttcatttcatttattcg 38
              ||||| |||| ||||||||||||||||
Sbjct: 242839 caatttgctcgtcatttcatttattcg 242813

>emb|BX640418.1| Bordetella pertussis strain Tohama I, complete genome; segment 8/12
          Length = 349346

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 174  accgcgcgccgccggcgtc 192
            |||||||||||||||||||
Sbjct: 6971 accgcgcgccgccggcgtc 6953

>emb|CR790376.10| Zebrafish DNA sequence from clone DKEY-66K12 in linkage group 4,
             complete sequence
          Length = 92591

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 17    ggctcttcatttcatttat 35
             |||||||||||||||||||
Sbjct: 56972 ggctcttcatttcatttat 56954

>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 169    cctgtaccgcgcgccgccg 187
              |||||||||||||||||||
Sbjct: 575032 cctgtaccgcgcgccgccg 575014

>gb|AY714877.1| Zea mays GLOSSY15 (gl15) gene, complete cds
          Length = 5967

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 37   cgttgcacacttgcacttg 55
            |||||||||||||||||||
Sbjct: 1544 cgttgcacacttgcacttg 1526

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 38       gttgcacacttgcacttgt 56
                |||||||||||||||||||
Sbjct: 24089272 gttgcacacttgcacttgt 24089254

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                       
Query: 38       gttgcacacttgcacttgttcat 60
                |||||||||||||||| ||||||
Sbjct: 10064766 gttgcacacttgcactagttcat 10064744

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                           
Query: 149      aactccgccaccgtcgtgctcctgtac 175
                |||||| || |||||||||||||||||
Sbjct: 18562012 aactcccccgccgtcgtgctcctgtac 18562038



 Score = 38.2 bits (19), Expect = 9.6
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                           
Query: 149      aactccgccaccgtcgtgctcctgtac 175
                |||||| || |||||||||||||||||
Sbjct: 18535316 aactcccccgccgtcgtgctcctgtac 18535342

>gb|AC092135.4| Homo sapiens chromosome 16 clone RP11-274A11, complete sequence
          Length = 185193

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 118    gtccaggctcttggccctg 136
              |||||||||||||||||||
Sbjct: 154433 gtccaggctcttggccctg 154415

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 154      cgccaccgtcgtgctcctg 172
                |||||||||||||||||||
Sbjct: 25579561 cgccaccgtcgtgctcctg 25579543

>gb|AC092139.5| Homo sapiens chromosome 16 clone RP11-391L3, complete sequence
          Length = 191731

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 118   gtccaggctcttggccctg 136
             |||||||||||||||||||
Sbjct: 43871 gtccaggctcttggccctg 43853

>dbj|AP005128.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0466E03
          Length = 138343

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 38    gttgcacacttgcacttgttcat 60
             |||||||||||||||| ||||||
Sbjct: 94070 gttgcacacttgcactagttcat 94048

>dbj|AP003573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0523F01
          Length = 146419

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 154   cgccaccgtcgtgctcctg 172
             |||||||||||||||||||
Sbjct: 97878 cgccaccgtcgtgctcctg 97860

>dbj|AP003571.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0458E02
          Length = 154458

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 154  cgccaccgtcgtgctcctg 172
            |||||||||||||||||||
Sbjct: 3006 cgccaccgtcgtgctcctg 2988

>dbj|AP005566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1253_E02
          Length = 166645

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 38    gttgcacacttgcacttgttcat 60
             |||||||||||||||| ||||||
Sbjct: 24444 gttgcacacttgcactagttcat 24422

>dbj|AP004634.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0671F11
          Length = 159409

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                         
Query: 149    aactccgccaccgtcgtgctcctgtac 175
              |||||| || |||||||||||||||||
Sbjct: 144035 aactcccccgccgtcgtgctcctgtac 144061



 Score = 38.2 bits (19), Expect = 9.6
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                         
Query: 149    aactccgccaccgtcgtgctcctgtac 175
              |||||| || |||||||||||||||||
Sbjct: 117339 aactcccccgccgtcgtgctcctgtac 117365

>dbj|AK108500.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-143-H03, full
           insert sequence
          Length = 1036

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 154 cgccaccgtcgtgctcctg 172
           |||||||||||||||||||
Sbjct: 40  cgccaccgtcgtgctcctg 58

>gb|AC152450.4| Mus musculus BAC clone RP24-342M21 from 18, complete sequence
          Length = 161106

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 120    ccaggctcttggccctgta 138
              |||||||||||||||||||
Sbjct: 120791 ccaggctcttggccctgta 120773

>dbj|AP003168.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-263C24, complete
             sequence
          Length = 122001

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 18    gctcttcatttcatttatt 36
             |||||||||||||||||||
Sbjct: 60820 gctcttcatttcatttatt 60838

>gb|U41466.1|ZMU41466 Zea mays Glossy15 mRNA, complete cds
          Length = 2284

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 37 cgttgcacacttgcacttg 55
          |||||||||||||||||||
Sbjct: 96 cgttgcacacttgcacttg 78

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 38       gttgcacacttgcacttgt 56
                |||||||||||||||||||
Sbjct: 24017478 gttgcacacttgcacttgt 24017460

>emb|AL772418.4|CNS08C9W Oryza sativa chromosome 12, . Partial sequence from BAC OJ1473_A04 of
            library Monsanto from chromosome 12 of cultivar
            Nipponbare of ssp. japonica of Oryza sativa (rice),
            complete sequence
          Length = 32463

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 38   gttgcacacttgcacttgt 56
            |||||||||||||||||||
Sbjct: 4346 gttgcacacttgcacttgt 4328

>dbj|AP004509.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT16K17, TM0037a,
             complete sequence
          Length = 84322

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 67    gatgaaagcgagattcatt 85
             |||||||||||||||||||
Sbjct: 51933 gatgaaagcgagattcatt 51951

>gb|AC152951.2| Mus musculus 10 BAC RP23-451J19 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 183431

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 16    tggctcttcatttcattta 34
             |||||||||||||||||||
Sbjct: 70210 tggctcttcatttcattta 70228

>dbj|AB030580.1| Homo sapiens DNA, breakpoint of inv(11)(q13,q25), cosmid clone
           CL1005
          Length = 30037

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 18  gctcttcatttcatttatt 36
           |||||||||||||||||||
Sbjct: 975 gctcttcatttcatttatt 993


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,686,626
Number of Sequences: 3902068
Number of extensions: 1686626
Number of successful extensions: 118776
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 118156
Number of HSP's gapped (non-prelim): 620
length of query: 193
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 171
effective length of database: 17,147,199,772
effective search space: 2932171161012
effective search space used: 2932171161012
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)