Clone Name | rbart35h01 |
---|---|
Clone Library Name | barley_pub |
>emb|AJ833018.1| Schedonorus pratensis hd1 gene for putative Hd1-like protein and s2539 gene for putative peroxidase Length = 9329 Score = 309 bits (156), Expect = 4e-81 Identities = 229/252 (90%), Gaps = 1/252 (0%) Strand = Plus / Plus Query: 156 aaaacgttcttatttgcagacaatcatcaaccatcaaaggagaaggcgcaaacaaaggtc 215 ||||| ||||||||| |||||||||||||||||| ||||| |||||||||||||| || Sbjct: 796 aaaacattcttatttccagacaatcatcaaccatgaaagggaaaggcgcaaacaaaagtt 855 Query: 216 ccttgagcttatgtgttcacgaatctgcaggtcttcctgacctcaccacctgcagggttg 275 || |||||| |||||||| ||||||||| ||||||||||||||||||||||||||||| Sbjct: 856 tctccagcttaggtgttcacaaatctgcagctcttcctgacctcaccacctgcagggttg 915 Query: 276 gtgatgttgcccatcttgaccatggagtccgaaaactgacatgaagaacagcgcagggtc 335 ||||||||||||||||||||||||||||| || ||||| | ||||||||||||| ||||| Sbjct: 916 gtgatgttgcccatcttgaccatggagtctgagaactg-cttgaagaacagcgcggggtc 974 Query: 336 agcccaatacttgttgaccgtgtcagccgttgagtacccggcgatgctggaccacatctc 395 |||||| |||||||||||||| || |||||||||||||||||||| || ||||||||||| Sbjct: 975 agcccagtacttgttgaccgtatcggccgttgagtacccggcgatacttgaccacatctc 1034 Query: 396 ctggtcagagtt 407 |||||||||||| Sbjct: 1035 ctggtcagagtt 1046 Score = 79.8 bits (40), Expect = 6e-12 Identities = 68/76 (89%), Gaps = 1/76 (1%) Strand = Plus / Plus Query: 1 aaaatctgatcagaatccattgctgatgtgtacatataacaggctgtgcaaaaccctc-a 59 ||||||| |||||||||||||| ||||||||| | |||||||| |||||||| ||||| | Sbjct: 627 aaaatcttatcagaatccattgttgatgtgtatacataacaggttgtgcaaagccctcaa 686 Query: 60 aatacatgatatatat 75 |||||||||| ||||| Sbjct: 687 aatacatgatgtatat 702
>ref|NM_185795.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 939 Score = 157 bits (79), Expect = 3e-35 Identities = 160/183 (87%), Gaps = 3/183 (1%) Strand = Plus / Minus Query: 226 atgtgttcacgaatctgcaggtcttcctgacctcaccacctgcagggttggtgatgttgc 285 ||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 937 atgtgttgacaaatctgcagttcttcctgacctcaccacctgcagggttggtgatgttgc 878 Query: 286 ccatcttgaccatggagtccgaaaactgacatgaagaacagcg-cagggtcagcccaata 344 ||||||||||||||||||| || ||||| | ||||||| ||| | | ||| ||||| || Sbjct: 877 ccatcttgaccatggagtcggagaactg-cttgaagaa-ggcgtcggcgtcggcccagta 820 Query: 345 cttgttgaccgtgtcagccgttgagtacccggcgatgctggaccacatctcctggtcaga 404 |||| |||| ||||| ||||| ||||| ||| || ||||||||||||||||||||| || Sbjct: 819 cttgctgacggtgtcggccgtggagtagccgaggacgctggaccacatctcctggtcgga 760 Query: 405 gtt 407 ||| Sbjct: 759 gtt 757
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 157 bits (79), Expect = 3e-35 Identities = 160/183 (87%), Gaps = 3/183 (1%) Strand = Plus / Plus Query: 226 atgtgttcacgaatctgcaggtcttcctgacctcaccacctgcagggttggtgatgttgc 285 ||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 9337073 atgtgttgacaaatctgcagttcttcctgacctcaccacctgcagggttggtgatgttgc 9337132 Query: 286 ccatcttgaccatggagtccgaaaactgacatgaagaacagcg-cagggtcagcccaata 344 ||||||||||||||||||| || ||||| | ||||||| ||| | | ||| ||||| || Sbjct: 9337133 ccatcttgaccatggagtcggagaactg-cttgaagaa-ggcgtcggcgtcggcccagta 9337190 Query: 345 cttgttgaccgtgtcagccgttgagtacccggcgatgctggaccacatctcctggtcaga 404 |||| |||| ||||| ||||| ||||| ||| || ||||||||||||||||||||| || Sbjct: 9337191 cttgctgacggtgtcggccgtggagtagccgaggacgctggaccacatctcctggtcgga 9337250 Query: 405 gtt 407 ||| Sbjct: 9337251 gtt 9337253 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 gttgcccatcttgaccatgg 300 |||||||||||||||||||| Sbjct: 20357890 gttgcccatcttgaccatgg 20357909
>dbj|AP005813.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0676F10 Length = 142510 Score = 157 bits (79), Expect = 3e-35 Identities = 160/183 (87%), Gaps = 3/183 (1%) Strand = Plus / Plus Query: 226 atgtgttcacgaatctgcaggtcttcctgacctcaccacctgcagggttggtgatgttgc 285 ||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 104414 atgtgttgacaaatctgcagttcttcctgacctcaccacctgcagggttggtgatgttgc 104473 Query: 286 ccatcttgaccatggagtccgaaaactgacatgaagaacagcg-cagggtcagcccaata 344 ||||||||||||||||||| || ||||| | ||||||| ||| | | ||| ||||| || Sbjct: 104474 ccatcttgaccatggagtcggagaactg-cttgaagaa-ggcgtcggcgtcggcccagta 104531 Query: 345 cttgttgaccgtgtcagccgttgagtacccggcgatgctggaccacatctcctggtcaga 404 |||| |||| ||||| ||||| ||||| ||| || ||||||||||||||||||||| || Sbjct: 104532 cttgctgacggtgtcggccgtggagtagccgaggacgctggaccacatctcctggtcgga 104591 Query: 405 gtt 407 ||| Sbjct: 104592 gtt 104594
>dbj|AP003044.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0038C05 Length = 152941 Score = 157 bits (79), Expect = 3e-35 Identities = 160/183 (87%), Gaps = 3/183 (1%) Strand = Plus / Plus Query: 226 atgtgttcacgaatctgcaggtcttcctgacctcaccacctgcagggttggtgatgttgc 285 ||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 65483 atgtgttgacaaatctgcagttcttcctgacctcaccacctgcagggttggtgatgttgc 65542 Query: 286 ccatcttgaccatggagtccgaaaactgacatgaagaacagcg-cagggtcagcccaata 344 ||||||||||||||||||| || ||||| | ||||||| ||| | | ||| ||||| || Sbjct: 65543 ccatcttgaccatggagtcggagaactg-cttgaagaa-ggcgtcggcgtcggcccagta 65600 Query: 345 cttgttgaccgtgtcagccgttgagtacccggcgatgctggaccacatctcctggtcaga 404 |||| |||| ||||| ||||| ||||| ||| || ||||||||||||||||||||| || Sbjct: 65601 cttgctgacggtgtcggccgtggagtagccgaggacgctggaccacatctcctggtcgga 65660 Query: 405 gtt 407 ||| Sbjct: 65661 gtt 65663
>dbj|AK060295.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-E04, full insert sequence Length = 1198 Score = 157 bits (79), Expect = 3e-35 Identities = 160/183 (87%), Gaps = 3/183 (1%) Strand = Plus / Minus Query: 226 atgtgttcacgaatctgcaggtcttcctgacctcaccacctgcagggttggtgatgttgc 285 ||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1055 atgtgttgacaaatctgcagttcttcctgacctcaccacctgcagggttggtgatgttgc 996 Query: 286 ccatcttgaccatggagtccgaaaactgacatgaagaacagcg-cagggtcagcccaata 344 ||||||||||||||||||| || ||||| | ||||||| ||| | | ||| ||||| || Sbjct: 995 ccatcttgaccatggagtcggagaactg-cttgaagaa-ggcgtcggcgtcggcccagta 938 Query: 345 cttgttgaccgtgtcagccgttgagtacccggcgatgctggaccacatctcctggtcaga 404 |||| |||| ||||| ||||| ||||| ||| || ||||||||||||||||||||| || Sbjct: 937 cttgctgacggtgtcggccgtggagtagccgaggacgctggaccacatctcctggtcgga 878 Query: 405 gtt 407 ||| Sbjct: 877 gtt 875
>tpe|BN000606.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx77 gene for class III peroxidase 77 precursor, exons 1-4 Length = 1901 Score = 157 bits (79), Expect = 3e-35 Identities = 160/183 (87%), Gaps = 3/183 (1%) Strand = Plus / Minus Query: 226 atgtgttcacgaatctgcaggtcttcctgacctcaccacctgcagggttggtgatgttgc 285 ||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1899 atgtgttgacaaatctgcagttcttcctgacctcaccacctgcagggttggtgatgttgc 1840 Query: 286 ccatcttgaccatggagtccgaaaactgacatgaagaacagcg-cagggtcagcccaata 344 ||||||||||||||||||| || ||||| | ||||||| ||| | | ||| ||||| || Sbjct: 1839 ccatcttgaccatggagtcggagaactg-cttgaagaa-ggcgtcggcgtcggcccagta 1782 Query: 345 cttgttgaccgtgtcagccgttgagtacccggcgatgctggaccacatctcctggtcaga 404 |||| |||| ||||| ||||| ||||| ||| || ||||||||||||||||||||| || Sbjct: 1781 cttgctgacggtgtcggccgtggagtagccgaggacgctggaccacatctcctggtcgga 1722 Query: 405 gtt 407 ||| Sbjct: 1721 gtt 1719
>gb|AY106495.1| Zea mays PCO063105 mRNA sequence Length = 1396 Score = 149 bits (75), Expect = 8e-33 Identities = 157/183 (85%), Gaps = 1/183 (0%) Strand = Plus / Minus Query: 225 tatgtgttcacgaatctgcaggtcttcctgacctcaccacctgcagggttggtgatgttg 284 |||||||| || ||||||||||||||||||||||| || || |||||||||||||||||| Sbjct: 1121 tatgtgttgacaaatctgcaggtcttcctgacctcgccgccggcagggttggtgatgttg 1062 Query: 285 cccatcttgaccatggagtccgaaaactgacatgaagaacagcgcagggtcagcccaata 344 |||||||| ||||||||||| || ||||| | ||||||| | | ||||| ||||| || Sbjct: 1061 cccatcttcaccatggagtcggagaactg-cttgaagaaggcctcggggtcggcccagta 1003 Query: 345 cttgttgaccgtgtcagccgttgagtacccggcgatgctggaccacatctcctggtcaga 404 ||||||||| ||||| | || ||||| || |||||||||||||||||| ||||||| || Sbjct: 1002 cttgttgactgtgtcggaggtggagtagcccgcgatgctggaccacatcgcctggtcgga 943 Query: 405 gtt 407 ||| Sbjct: 942 gtt 940
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 277 tgatgttgcccatcttgaccatggagt 303 ||||||||||||||||||||||||||| Sbjct: 7098249 tgatgttgcccatcttgaccatggagt 7098275 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 90 tacagccaaaatatttttgtgt 111 |||||||||||||||||||||| Sbjct: 34735324 tacagccaaaatatttttgtgt 34735345 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 277 tgatgttgcccatcttgaccat 298 |||||||||||||||||||||| Sbjct: 7077975 tgatgttgcccatcttgaccat 7077954
>gb|DQ376124.1| Eucalyptus globulus subsp. globulus peroxidase (Px1) mRNA, partial cds Length = 957 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 275 ggtgatgttgcccatcttgaccatgga 301 ||||||||||||||||||||||||||| Sbjct: 738 ggtgatgttgcccatcttgaccatgga 712
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 277 tgatgttgcccatcttgaccatggagt 303 ||||||||||||||||||||||||||| Sbjct: 7096144 tgatgttgcccatcttgaccatggagt 7096170 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 90 tacagccaaaatatttttgtgt 111 |||||||||||||||||||||| Sbjct: 34825396 tacagccaaaatatttttgtgt 34825417 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 277 tgatgttgcccatcttgaccat 298 |||||||||||||||||||||| Sbjct: 7075870 tgatgttgcccatcttgaccat 7075849
>gb|AC137696.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0049C20, from chromosome 3, complete sequence Length = 136098 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 277 tgatgttgcccatcttgaccatggagt 303 ||||||||||||||||||||||||||| Sbjct: 96089 tgatgttgcccatcttgaccatggagt 96063 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 277 tgatgttgcccatcttgaccat 298 |||||||||||||||||||||| Sbjct: 116363 tgatgttgcccatcttgaccat 116384
>dbj|AK103019.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033116N23, full insert sequence Length = 945 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 277 tgatgttgcccatcttgaccatggagt 303 ||||||||||||||||||||||||||| Sbjct: 565 tgatgttgcccatcttgaccatggagt 539
>tpe|BN000567.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx38 gene for class III peroxidase 38 precursor, exons 1-4 Length = 1681 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 277 tgatgttgcccatcttgaccatggagt 303 ||||||||||||||||||||||||||| Sbjct: 1625 tgatgttgcccatcttgaccatggagt 1599
>dbj|D49551.1|RICP Oryza sativa (japonica cultivar-group) poxN gene for peroxidase, exon1-4, complete cds Length = 3724 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 277 tgatgttgcccatcttgaccatggagt 303 ||||||||||||||||||||||||||| Sbjct: 3211 tgatgttgcccatcttgaccatggagt 3185
>dbj|D14482.1|RICPRXRPNB Oryza sativa (japonica cultivar-group) prxRPN mRNA for putative peroxidase, complete cds Length = 1348 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 277 tgatgttgcccatcttgaccatggagt 303 ||||||||||||||||||||||||||| Sbjct: 955 tgatgttgcccatcttgaccatggagt 929
>ref|NM_193315.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1011 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Minus Query: 278 gatgttgcccatcttgaccatgga 301 |||||||||||||||||||||||| Sbjct: 945 gatgttgcccatcttgaccatgga 922
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Minus Query: 278 gatgttgcccatcttgaccatgga 301 |||||||||||||||||||||||| Sbjct: 20062198 gatgttgcccatcttgaccatgga 20062175 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 179 tcatcaaccatcaaaggagaag 200 |||||||||||||||||||||| Sbjct: 37888674 tcatcaaccatcaaaggagaag 37888653 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 gttgcccatcttgaccatgg 300 |||||||||||||||||||| Sbjct: 10679611 gttgcccatcttgaccatgg 10679630
>dbj|AP004233.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0065J17 Length = 139014 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Minus Query: 278 gatgttgcccatcttgaccatgga 301 |||||||||||||||||||||||| Sbjct: 60160 gatgttgcccatcttgaccatgga 60137
>dbj|AK105363.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-E09, full insert sequence Length = 1391 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Minus Query: 278 gatgttgcccatcttgaccatgga 301 |||||||||||||||||||||||| Sbjct: 1024 gatgttgcccatcttgaccatgga 1001
>gb|AY105520.1| Zea mays PCO080795 mRNA sequence Length = 1346 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Minus Query: 278 gatgttgcccatcttgaccatgga 301 |||||||||||||||||||||||| Sbjct: 1048 gatgttgcccatcttgaccatgga 1025
>tpe|BN000546.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx17 gene for class III peroxidase 17 precursor, exons 1-4 Length = 4115 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Minus Query: 278 gatgttgcccatcttgaccatgga 301 |||||||||||||||||||||||| Sbjct: 4049 gatgttgcccatcttgaccatgga 4026
>ref|XM_470636.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1005 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 277 tgatgttgcccatcttgaccat 298 |||||||||||||||||||||| Sbjct: 943 tgatgttgcccatcttgaccat 922
>ref|XM_463504.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3954 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 179 tcatcaaccatcaaaggagaag 200 |||||||||||||||||||||| Sbjct: 594 tcatcaaccatcaaaggagaag 615
>ref|XM_984403.1| PREDICTED: Mus musculus similar to development- and differentiation-enhancing factor 2; PYK2 C terminus-associated protein (LOC385154), mRNA Length = 1470 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 371 acccggcgatgctggaccacatctcc 396 ||||||||||||||||||| |||||| Sbjct: 249 acccggcgatgctggaccagatctcc 274
>gb|AC092557.7| Oryza sativa chromosome 3 BAC OSJNBa0096I06 genomic sequence, complete sequence Length = 164352 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 90 tacagccaaaatatttttgtgt 111 |||||||||||||||||||||| Sbjct: 127326 tacagccaaaatatttttgtgt 127305
>gb|AC103891.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1175C11, complete sequence Length = 123620 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 277 tgatgttgcccatcttgaccat 298 |||||||||||||||||||||| Sbjct: 4390 tgatgttgcccatcttgaccat 4411
>dbj|AP004669.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0491F11 Length = 152274 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 179 tcatcaaccatcaaaggagaag 200 |||||||||||||||||||||| Sbjct: 110030 tcatcaaccatcaaaggagaag 110009
>dbj|AK068140.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134G03, full insert sequence Length = 4473 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 179 tcatcaaccatcaaaggagaag 200 |||||||||||||||||||||| Sbjct: 682 tcatcaaccatcaaaggagaag 703
>tpe|BN000566.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx37 gene for class III peroxidase 37 precursor, exons 1-3 Length = 1188 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 277 tgatgttgcccatcttgaccat 298 |||||||||||||||||||||| Sbjct: 1126 tgatgttgcccatcttgaccat 1105
>dbj|AP003566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0008G24 Length = 152736 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 179 tcatcaaccatcaaaggagaag 200 |||||||||||||||||||||| Sbjct: 147922 tcatcaaccatcaaaggagaag 147901
>ref|NM_194555.1| Oryza sativa (japonica cultivar-group) putative peroxidase (OSJNBa0015O22.21), mRNA Length = 981 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 277 tgatgttgcccatcttgaccatgga 301 |||||||||||||||| |||||||| Sbjct: 925 tgatgttgcccatcttcaccatgga 901
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 277 tgatgttgcccatcttgaccatgga 301 |||||||||||||||| |||||||| Sbjct: 656413 tgatgttgcccatcttcaccatgga 656437
>gb|AC068654.2| Genomic Sequence For Oryza sativa (japonica cultivar-group) cultivar Nipponbare Clone OSJNBa0015O22 From Chromosome 10, complete sequence Length = 189349 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 277 tgatgttgcccatcttgaccatgga 301 |||||||||||||||| |||||||| Sbjct: 124021 tgatgttgcccatcttcaccatgga 124045
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 277 tgatgttgcccatcttgaccatgga 301 |||||||||||||||| |||||||| Sbjct: 656413 tgatgttgcccatcttcaccatgga 656437
>dbj|AK099448.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013021P04, full insert sequence Length = 1193 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 277 tgatgttgcccatcttgaccatgga 301 |||||||||||||||| |||||||| Sbjct: 965 tgatgttgcccatcttcaccatgga 941
>dbj|AK061206.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-B12, full insert sequence Length = 1170 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 277 tgatgttgcccatcttgaccatgga 301 |||||||||||||||| |||||||| Sbjct: 942 tgatgttgcccatcttcaccatgga 918
>tpe|BN000655.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx126 gene for class III peroxidase 126 precursor, exons 1-4 Length = 1493 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 277 tgatgttgcccatcttgaccatgga 301 |||||||||||||||| |||||||| Sbjct: 1437 tgatgttgcccatcttcaccatgga 1413
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 277 tgatgttgcccatcttgaccatgga 301 |||||||||||||||| |||||||| Sbjct: 656410 tgatgttgcccatcttcaccatgga 656434
>dbj|D84400.1| Oryza sativa (japonica cultivar-group) poxA gene for peroxidase, complete cds Length = 4237 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 277 tgatgttgcccatcttgaccatgga 301 |||||||||||||||| |||||||| Sbjct: 3639 tgatgttgcccatcttcaccatgga 3615
>dbj|D14481.1|RICPRXRPAA Oryza sativa (japonica cultivar-group) prxRPA mRNA for putative peroxidase, complete cds Length = 1204 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 277 tgatgttgcccatcttgaccatgga 301 |||||||||||||||| |||||||| Sbjct: 933 tgatgttgcccatcttcaccatgga 909
>gb|AY206411.1| Ipomoea batatas anionic peroxidase swpa6 mRNA, complete cds Length = 1284 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 gttgcccatcttgaccatgg 300 |||||||||||||||||||| Sbjct: 1018 gttgcccatcttgaccatgg 999
>ref|NM_183630.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1011 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 gttgcccatcttgaccatgg 300 |||||||||||||||||||| Sbjct: 951 gttgcccatcttgaccatgg 932
>ref|NM_015715.2| Homo sapiens phospholipase A2, group III (PLA2G3), mRNA Length = 2593 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 atgctggaccacatctcctg 398 |||||||||||||||||||| Sbjct: 1815 atgctggaccacatctcctg 1834
>ref|XM_479517.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1229 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 277 tgatgttgcccatcttgaccatgg 300 |||||||||||||||| ||||||| Sbjct: 979 tgatgttgcccatcttcaccatgg 956
>gb|AC135419.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0044P19, complete sequence Length = 176917 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 gttgcccatcttgaccatgg 300 |||||||||||||||||||| Sbjct: 130722 gttgcccatcttgaccatgg 130741
>gb|AY857762.1| Triticum monococcum peroxidase 8 (POX8) mRNA, complete cds Length = 1282 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 277 tgatgttgcccatcttgaccatgg 300 |||||||||||||||||| ||||| Sbjct: 995 tgatgttgcccatcttgatcatgg 972
>gb|AC087552.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0519E07, complete sequence Length = 151399 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 gttgcccatcttgaccatgg 300 |||||||||||||||||||| Sbjct: 95436 gttgcccatcttgaccatgg 95417
>ref|XM_359871.1| Magnaporthe grisea 70-15 hypothetical protein (MG04906.4) partial mRNA Length = 2604 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 366 tgagtacccggcgatgctgg 385 |||||||||||||||||||| Sbjct: 21 tgagtacccggcgatgctgg 40
>ref|XM_611826.2| PREDICTED: Bos taurus similar to Kallikrein 6 precursor (Protease M) (Neurosin) (Zyme) (SP59) (LOC532677), mRNA Length = 1234 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 cgaatctgcaggtcttcctg 254 |||||||||||||||||||| Sbjct: 203 cgaatctgcaggtcttcctg 222
>gb|BC025316.1| Homo sapiens phospholipase A2, group III, mRNA (cDNA clone MGC:39312 IMAGE:5458919), complete cds Length = 2593 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 atgctggaccacatctcctg 398 |||||||||||||||||||| Sbjct: 1815 atgctggaccacatctcctg 1834
>gb|AC135429.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0636F09, complete sequence Length = 177374 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 gttgcccatcttgaccatgg 300 |||||||||||||||||||| Sbjct: 73303 gttgcccatcttgaccatgg 73322
>emb|CR376738.9| Zebrafish DNA sequence from clone DKEY-97H16 in linkage group 7, complete sequence Length = 118757 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 agcgcagggtcagcccaata 344 |||||||||||||||||||| Sbjct: 62616 agcgcagggtcagcccaata 62635
>emb|Z83313.1|HS106C24 Human DNA sequence from clone RP1-106C24 on chromosome X Contains a tropomyosin 2 (beta) (TPM2) pseudogene, complete sequence Length = 93959 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 tcccttgagcttatgtgttc 233 |||||||||||||||||||| Sbjct: 92878 tcccttgagcttatgtgttc 92859
>ref|XM_788826.1| PREDICTED: Strongylocentrotus purpuratus similar to laminin A (XP714) (LOC589177), mRNA Length = 1833 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 356 tgtcagccgttgagtacccggcga 379 |||| ||||||||||||||||||| Sbjct: 238 tgtccgccgttgagtacccggcga 215
>emb|AL731628.4|OSJN00282 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0088C09, complete sequence Length = 96079 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 278 gatgttgcccatcttgaccatgga 301 |||| ||||||||||||||||||| Sbjct: 67568 gatgctgcccatcttgaccatgga 67545
>gb|AC090696.6| Homo sapiens chromosome 15, clone RP11-595N10, complete sequence Length = 187350 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 atcaaccatcaaaggagaag 200 |||||||||||||||||||| Sbjct: 179281 atcaaccatcaaaggagaag 179262
>gb|AC021979.6| Homo sapiens chromosome 15, clone RP11-30G8, complete sequence Length = 190692 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 atcaaccatcaaaggagaag 200 |||||||||||||||||||| Sbjct: 13716 atcaaccatcaaaggagaag 13697
>gb|AC010837.2| Homo sapiens chromosome 18, clone RP11-307E5, complete sequence Length = 210074 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 atcaaccatcaaaggagaag 200 |||||||||||||||||||| Sbjct: 45041 atcaaccatcaaaggagaag 45022
>emb|BX005222.8| Zebrafish DNA sequence from clone DKEY-68M7 in linkage group 12, complete sequence Length = 66255 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 tcaaatacatgatatatatt 76 |||||||||||||||||||| Sbjct: 7106 tcaaatacatgatatatatt 7087
>gb|AF037034.2|AF037034 Zea mays putative peroxidase P7X mRNA, complete cds Length = 1360 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 gttgcccatcttgaccatgg 300 |||||||||||||||||||| Sbjct: 972 gttgcccatcttgaccatgg 953
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 278 gatgttgcccatcttgaccatgga 301 |||| ||||||||||||||||||| Sbjct: 20964336 gatgctgcccatcttgaccatgga 20964313
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 277 tgatgttgcccatcttgaccatgg 300 |||||||||||||||| ||||||| Sbjct: 28637301 tgatgttgcccatcttcaccatgg 28637324
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 gttgcccatcttgaccatgg 300 |||||||||||||||||||| Sbjct: 20817498 gttgcccatcttgaccatgg 20817517 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 gttgcccatcttgaccatgg 300 |||||||||||||||||||| Sbjct: 2002559 gttgcccatcttgaccatgg 2002540
>gb|AC110297.4| Homo sapiens BAC clone RP11-150D14 from 4, complete sequence Length = 10545 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 caaatacatgatatatattc 77 |||||||||||||||||||| Sbjct: 4013 caaatacatgatatatattc 3994
>dbj|AP002820.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0702D12 Length = 137332 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 gttgcccatcttgaccatgg 300 |||||||||||||||||||| Sbjct: 2425 gttgcccatcttgaccatgg 2444
>dbj|AP002482.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0706B05 Length = 187835 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 gttgcccatcttgaccatgg 300 |||||||||||||||||||| Sbjct: 174234 gttgcccatcttgaccatgg 174253
>dbj|AP004731.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0016D02 Length = 157822 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 gttgcccatcttgaccatgg 300 |||||||||||||||||||| Sbjct: 81285 gttgcccatcttgaccatgg 81304
>dbj|AP003817.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1167_G06 Length = 112386 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 277 tgatgttgcccatcttgaccatgg 300 |||||||||||||||| ||||||| Sbjct: 103259 tgatgttgcccatcttcaccatgg 103282
>gb|AF220490.1|AF220490 Homo sapiens group III secreted phospholipase A2 mRNA, complete cds Length = 2719 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 atgctggaccacatctcctg 398 |||||||||||||||||||| Sbjct: 1939 atgctggaccacatctcctg 1958
>dbj|AK121950.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107J23, full insert sequence Length = 1345 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 gttgcccatcttgaccatgg 300 |||||||||||||||||||| Sbjct: 1013 gttgcccatcttgaccatgg 994
>dbj|AK108989.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-F11, full insert sequence Length = 1351 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 278 gatgttgcccatcttgaccatgga 301 |||| ||||||||||||||||||| Sbjct: 1057 gatgctgcccatcttgaccatgga 1034
>dbj|AK099187.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107P11, full insert sequence Length = 1271 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 277 tgatgttgcccatcttgaccatgg 300 |||||||||||||||||| ||||| Sbjct: 992 tgatgttgcccatcttgatcatgg 969
>gb|AC005005.1|AC005005 Homo sapiens PAC clone RP3-412A9 from 22, complete sequence Length = 133893 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 atgctggaccacatctcctg 398 |||||||||||||||||||| Sbjct: 42542 atgctggaccacatctcctg 42561
>dbj|AK060984.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-B02, full insert sequence Length = 1229 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 277 tgatgttgcccatcttgaccatgg 300 |||||||||||||||| ||||||| Sbjct: 979 tgatgttgcccatcttcaccatgg 956
>dbj|AP003757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1409_C08 Length = 90673 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 277 tgatgttgcccatcttgaccatgg 300 |||||||||||||||| ||||||| Sbjct: 12471 tgatgttgcccatcttcaccatgg 12494
>gb|AY108561.1| Zea mays PCO145588 mRNA sequence Length = 783 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 277 tgatgttgcccatcttgaccatgg 300 |||||||||||||||| ||||||| Sbjct: 589 tgatgttgcccatcttcaccatgg 566
>tpe|BN000644.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx115 gene for class III peroxidase 115 precursor, exons 1-3 Length = 1751 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 277 tgatgttgcccatcttgaccatgg 300 |||||||||||||||| ||||||| Sbjct: 1692 tgatgttgcccatcttcaccatgg 1669
>tpe|BN000615.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx86 gene for class III peroxidase 86 precursor, exons 1-3 Length = 1188 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 gttgcccatcttgaccatgg 300 |||||||||||||||||||| Sbjct: 1128 gttgcccatcttgaccatgg 1109
>tpe|BN000598.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx69 gene for class III peroxidase 69 precursor, exons 1-2 Length = 1108 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 gttgcccatcttgaccatgg 300 |||||||||||||||||||| Sbjct: 1048 gttgcccatcttgaccatgg 1029
>tpe|BN000583.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx54 gene for class III peroxidase 54 precursor, exon 1 Length = 1038 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 278 gatgttgcccatcttgaccatgga 301 |||| ||||||||||||||||||| Sbjct: 975 gatgctgcccatcttgaccatgga 952
>tpe|BN000535.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx6 gene for class III peroxidase 6 precursor, exons 1-2 Length = 6015 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 gttgcccatcttgaccatgg 300 |||||||||||||||||||| Sbjct: 5955 gttgcccatcttgaccatgg 5936
>gb|AC006550.2|F10O3 Arabidopsis thaliana chromosome 1 BAC F10O3 sequence, complete sequence Length = 78341 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 tctgatcagaatccattgct 24 |||||||||||||||||||| Sbjct: 35390 tctgatcagaatccattgct 35371
>gb|L36112.1|SSNPEROXIC Stylosanthes humilis peroxidase mRNA Length = 1176 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 atgttgcccatcttgaccat 298 |||||||||||||||||||| Sbjct: 933 atgttgcccatcttgaccat 914
>emb|AL731590.4|OSJN00233 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035I04, complete sequence Length = 140890 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 278 gatgttgcccatcttgaccatgga 301 |||| ||||||||||||||||||| Sbjct: 9742 gatgctgcccatcttgaccatgga 9719
>gb|L77080.1|SSNCAPEA Stylosanthes humilis cationic peroxidase gene, complete cds Length = 2300 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 atgttgcccatcttgaccat 298 |||||||||||||||||||| Sbjct: 2013 atgttgcccatcttgaccat 1994
>emb|AL772312.6| Mouse DNA sequence from clone RP23-91D16 on chromosome 4, complete sequence Length = 183630 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 tgtgcaaaaccctcaaatacatga 68 |||||| ||||||||||||||||| Sbjct: 66444 tgtgcagaaccctcaaatacatga 66467 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,235,294 Number of Sequences: 3902068 Number of extensions: 4235294 Number of successful extensions: 70784 Number of sequences better than 10.0: 87 Number of HSP's better than 10.0 without gapping: 93 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 70343 Number of HSP's gapped (non-prelim): 439 length of query: 407 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 385 effective length of database: 17,147,199,772 effective search space: 6601671912220 effective search space used: 6601671912220 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)