ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart35g06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_463421.1| Oryza sativa (japonica cultivar-group), predic... 56 8e-05
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 56 8e-05
3dbj|AP003373.3| Oryza sativa (japonica cultivar-group) genomic D... 56 8e-05
4dbj|AK071819.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 8e-05
5gb|AF279705.1| Leptotila verreauxi angelica cytochrome b (cytb) ... 46 0.073
6gb|AF279704.1| Leptotila verreauxi fulviventris cytochrome b (cy... 46 0.073
7gb|AF082048.3| Coccyzus erythropthalmus isolate T1012 mitochondr... 44 0.29
8gb|AF249272.1|AF249272 Coccyzus erythropthalmus cytochrome b (cy... 44 0.29
9gb|BC071949.1| Homo sapiens cDNA clone IMAGE:6302164, partial cds 42 1.1
10ref|NM_030972.2| Homo sapiens zinc finger protein 611 (ZNF611), ... 42 1.1
11gb|BC028590.1| Homo sapiens zinc finger protein 611, mRNA (cDNA ... 42 1.1
12emb|AL845302.4| Zebrafish DNA sequence from clone CH211-108C6 in... 42 1.1
13emb|AL834123.1|HSM805258 Homo sapiens mRNA; cDNA DKFZp761J2122 (... 42 1.1
14gb|AC008813.6| Homo sapiens chromosome 19 clone CTD-2102P23, com... 42 1.1
15dbj|AK097434.1| Homo sapiens cDNA FLJ40115 fis, clone TESTI20088... 42 1.1
16dbj|AK091389.1| Homo sapiens cDNA FLJ34070 fis, clone FCBBF30021... 42 1.1
17gb|AC063977.6| Homo sapiens chromosome 19 clone CTD-3187F8, comp... 42 1.1
18dbj|AK021787.1| Homo sapiens cDNA FLJ11725 fis, clone HEMBA10053... 42 1.1
19gb|AY040543.1| Homo sapiens sialic acid binding immunoglobulin-l... 42 1.1
20gb|AF450493.1|AF450493 Saurothera merlini CUSME1 cytochrome b (c... 42 1.1
21gb|AC022150.6| Homo sapiens chromosome 19 clone CTD-3099C6, comp... 42 1.1
22gb|AF495811.1| Sterna antillarum clone B cytochrome b gene, part... 42 1.1
23gb|AF251534.1|AF251534 Zenaida asiatica specimen-voucher DHC98-0... 42 1.1
24gb|AF251533.1|AF251533 Zenaida asiatica specimen-voucher KPJ97-0... 42 1.1
25gb|AF182699.1|AF182699 Zenaida meloda cytochrome b gene, partial... 42 1.1
26gb|AF182695.1|AF182695 Streptopelia chinensis cytochrome b gene,... 42 1.1
27gb|AF182694.1|AF182694 Columba livia cytochrome b gene, partial ... 42 1.1
28gb|AF483341.1| Streptopelia chinensis cytochrome b (cytb) gene, ... 42 1.1
29dbj|AP006422.1| Lotus japonicus genomic DNA, chromosome 2, clone... 42 1.1
30ref|XM_520678.1| PREDICTED: Pan troglodytes similar to Zinc fing... 40 4.5
31gb|BC000694.2| Homo sapiens zinc finger protein 219, mRNA (cDNA ... 40 4.5
32emb|AL031053.1|HS267M20 Human DNA sequence from clone RP1-267M20... 40 4.5
33gb|BC036105.1| Homo sapiens zinc finger protein 219, mRNA (cDNA ... 40 4.5
34gb|BT007678.1| Synthetic construct Homo sapiens zinc finger prot... 40 4.5
35gb|BT006956.1| Homo sapiens zinc finger protein 219 mRNA, comple... 40 4.5
36emb|CR610917.1| full-length cDNA clone CS0DF013YA19 of Fetal bra... 40 4.5
37dbj|AK056261.1| Homo sapiens cDNA FLJ31699 fis, clone NT2RI20060... 40 4.5
38gb|AC022905.7| Homo sapiens chromosome 8, clone RP11-656G20, com... 40 4.5
39gb|AF495812.1| Sterna antillarum clone C cytochrome b gene, part... 40 4.5
40gb|AF495810.1| Sterna antillarum clone A cytochrome b gene, part... 40 4.5
41gb|AC104753.10| Mus musculus chromosome 7, clone RP24-168P9, com... 40 4.5
42gb|AF251531.1|AF251531 Zenaida galapagoensis cytochrome b gene, ... 40 4.5
43gb|AF182705.1|AF182705 Ducula bicolor cytochrome b gene, partial... 40 4.5
44gb|AF182701.1|AF182701 Zenaida galapagoensis cytochrome b gene, ... 40 4.5
45gb|AY631297.1| Sterna antillarum cytochrome b (cytb) gene, parti... 40 4.5
46gb|AY891877.1| Synthetic construct Homo sapiens clone FLH012689.... 40 4.5
47gb|AY889389.1| Synthetic construct Homo sapiens clone FLH012694.... 40 4.5
48gb|AY889388.1| Synthetic construct Homo sapiens clone FLH012693.... 40 4.5
49emb|AL731782.15| Mouse DNA sequence from clone RP23-180G3 on chr... 40 4.5
50emb|AL161668.6|CNS01RHB Human chromosome 14 DNA sequence BAC R-9... 40 4.5
51gb|U90649.1|FGU90649 Francolinus gularis cytochrome b (cytb) gen... 40 4.5
52emb|AL157687.6|CNS01RFZ Human chromosome 14 DNA sequence BAC C-2... 40 4.5
53ref|XM_670541.1| Plasmodium berghei strain ANKA myosin d (PB0004... 40 4.5
54dbj|AB027122.1| Homo sapiens mRNA for HEIL2, complete cds 40 4.5 
>ref|XM_463421.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1455

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 106/132 (80%)
 Strand = Plus / Minus

                                                                        
Query: 146  tccacaagccccgccaacgtcgcctcagattctccaccctcgagcagagcctctttggcc 205
            ||||| |||| |||||||||| |||| || || || || ||| |||| ||| | || |||
Sbjct: 1427 tccaccagccgcgccaacgtcacctccgactcgccgccgtcgcgcagcgccgccttcgcc 1368

                                                                        
Query: 206  cgccgcatcaccgctagagtccgttcccggagcaccctcccgccttccgaaaccatcatc 265
            ||||||||  |||| || ||||| ||| ||||| |||||||||| || ||  |||||| |
Sbjct: 1367 cgccgcatggccgccagcgtccgctccaggagcgccctcccgccgtcggactccatcagc 1308

                        
Query: 266  cacctcaccttc 277
            |||| |||||||
Sbjct: 1307 caccgcaccttc 1296
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 106/132 (80%)
 Strand = Plus / Plus

                                                                            
Query: 146      tccacaagccccgccaacgtcgcctcagattctccaccctcgagcagagcctctttggcc 205
                ||||| |||| |||||||||| |||| || || || || ||| |||| ||| | || |||
Sbjct: 28841490 tccaccagccgcgccaacgtcacctccgactcgccgccgtcgcgcagcgccgccttcgcc 28841549

                                                                            
Query: 206      cgccgcatcaccgctagagtccgttcccggagcaccctcccgccttccgaaaccatcatc 265
                ||||||||  |||| || ||||| ||| ||||| |||||||||| || ||  |||||| |
Sbjct: 28841550 cgccgcatggccgccagcgtccgctccaggagcgccctcccgccgtcggactccatcagc 28841609

                            
Query: 266      cacctcaccttc 277
                |||| |||||||
Sbjct: 28841610 caccgcaccttc 28841621
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>dbj|AP003373.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1116_H09
          Length = 110086

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 106/132 (80%)
 Strand = Plus / Plus

                                                                         
Query: 146   tccacaagccccgccaacgtcgcctcagattctccaccctcgagcagagcctctttggcc 205
             ||||| |||| |||||||||| |||| || || || || ||| |||| ||| | || |||
Sbjct: 59533 tccaccagccgcgccaacgtcacctccgactcgccgccgtcgcgcagcgccgccttcgcc 59592

                                                                         
Query: 206   cgccgcatcaccgctagagtccgttcccggagcaccctcccgccttccgaaaccatcatc 265
             ||||||||  |||| || ||||| ||| ||||| |||||||||| || ||  |||||| |
Sbjct: 59593 cgccgcatggccgccagcgtccgctccaggagcgccctcccgccgtcggactccatcagc 59652

                         
Query: 266   cacctcaccttc 277
             |||| |||||||
Sbjct: 59653 caccgcaccttc 59664
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>dbj|AK071819.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023114N14, full
            insert sequence
          Length = 1727

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 106/132 (80%)
 Strand = Plus / Minus

                                                                        
Query: 146  tccacaagccccgccaacgtcgcctcagattctccaccctcgagcagagcctctttggcc 205
            ||||| |||| |||||||||| |||| || || || || ||| |||| ||| | || |||
Sbjct: 1488 tccaccagccgcgccaacgtcacctccgactcgccgccgtcgcgcagcgccgccttcgcc 1429

                                                                        
Query: 206  cgccgcatcaccgctagagtccgttcccggagcaccctcccgccttccgaaaccatcatc 265
            ||||||||  |||| || ||||| ||| ||||| |||||||||| || ||  |||||| |
Sbjct: 1428 cgccgcatggccgccagcgtccgctccaggagcgccctcccgccgtcggactccatcagc 1369

                        
Query: 266  cacctcaccttc 277
            |||| |||||||
Sbjct: 1368 caccgcaccttc 1357
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>gb|AF279705.1| Leptotila verreauxi angelica cytochrome b (cytb) gene, partial cds;
           mitochondrial gene for mitochondrial product
          Length = 1045

 Score = 46.1 bits (23), Expect = 0.073
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 257 accatcatccacctcaccttctt 279
           |||||||||||||||||||||||
Sbjct: 482 accatcatccacctcaccttctt 504
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>gb|AF279704.1| Leptotila verreauxi fulviventris cytochrome b (cytb) gene, partial
           cds; mitochondrial gene for mitochondrial product
          Length = 1045

 Score = 46.1 bits (23), Expect = 0.073
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 257 accatcatccacctcaccttctt 279
           |||||||||||||||||||||||
Sbjct: 482 accatcatccacctcaccttctt 504
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>gb|AF082048.3| Coccyzus erythropthalmus isolate T1012 mitochondrial NADH
           dehydrogenase subunit 5 (ND5) gene, partial cds;
           cytochrome b (cytb) gene, complete cds; tRNA-Thr gene,
           complete sequence; and control region, partial sequence
          Length = 1883

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 256 aaccatcatccacctcaccttc 277
           ||||||||||||||||||||||
Sbjct: 692 aaccatcatccacctcaccttc 713
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>gb|AF249272.1|AF249272 Coccyzus erythropthalmus cytochrome b (cytb) gene, partial cds;
           mitochondrial gene for mitochondrial product
          Length = 978

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 256 aaccatcatccacctcaccttc 277
           ||||||||||||||||||||||
Sbjct: 437 aaccatcatccacctcaccttc 458
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>gb|BC071949.1| Homo sapiens cDNA clone IMAGE:6302164, partial cds
          Length = 1473

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 54  aaatcacaccttaaagacata 74
           |||||||||||||||||||||
Sbjct: 158 aaatcacaccttaaagacata 178
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>ref|NM_030972.2| Homo sapiens zinc finger protein 611 (ZNF611), mRNA
          Length = 3153

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 54   aaatcacaccttaaagacata 74
            |||||||||||||||||||||
Sbjct: 2469 aaatcacaccttaaagacata 2489
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>gb|BC028590.1| Homo sapiens zinc finger protein 611, mRNA (cDNA clone IMAGE:4827918)
          Length = 4818

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 54   aaatcacaccttaaagacata 74
            |||||||||||||||||||||
Sbjct: 2711 aaatcacaccttaaagacata 2731
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>emb|AL845302.4| Zebrafish DNA sequence from clone CH211-108C6 in linkage group 5
             Contains part of a novel gene similar to human SSH1
             (slingshot 1), a novel gene, part of a novel gene similar
             to human CORO1C (actin binding protein coronin 1C) and a
             CpG island, complete sequence
          Length = 147219

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 50    actaaaatcacaccttaaaga 70
             |||||||||||||||||||||
Sbjct: 68564 actaaaatcacaccttaaaga 68584
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>emb|AL834123.1|HSM805258 Homo sapiens mRNA; cDNA DKFZp761J2122 (from clone DKFZp761J2122)
          Length = 3143

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 54   aaatcacaccttaaagacata 74
            |||||||||||||||||||||
Sbjct: 1831 aaatcacaccttaaagacata 1851
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>gb|AC008813.6| Homo sapiens chromosome 19 clone CTD-2102P23, complete sequence
          Length = 162914

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 54     aaatcacaccttaaagacata 74
              |||||||||||||||||||||
Sbjct: 157071 aaatcacaccttaaagacata 157091
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>dbj|AK097434.1| Homo sapiens cDNA FLJ40115 fis, clone TESTI2008822, weakly similar to
            ZINC FINGER PROTEIN 91
          Length = 3153

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 54   aaatcacaccttaaagacata 74
            |||||||||||||||||||||
Sbjct: 2469 aaatcacaccttaaagacata 2489
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>dbj|AK091389.1| Homo sapiens cDNA FLJ34070 fis, clone FCBBF3002190, weakly similar to
            ZINC FINGER PROTEIN 91
          Length = 3301

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 54   aaatcacaccttaaagacata 74
            |||||||||||||||||||||
Sbjct: 2007 aaatcacaccttaaagacata 2027
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>gb|AC063977.6| Homo sapiens chromosome 19 clone CTD-3187F8, complete sequence
          Length = 212752

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 264   tccacctcaccttcttgggaacctc 288
             |||||||||||||||||| ||||||
Sbjct: 30794 tccacctcaccttcttggcaacctc 30770
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>dbj|AK021787.1| Homo sapiens cDNA FLJ11725 fis, clone HEMBA1005359, moderately
           similar to ZINC FINGER PROTEIN 137
          Length = 1505

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 54  aaatcacaccttaaagacata 74
           |||||||||||||||||||||
Sbjct: 212 aaatcacaccttaaagacata 232
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>gb|AY040543.1| Homo sapiens sialic acid binding immunoglobulin-like lectin 7 (SIGLEC7)
             gene, complete cds
          Length = 16750

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 264   tccacctcaccttcttgggaacctc 288
             |||||||||||||||||| ||||||
Sbjct: 12243 tccacctcaccttcttggcaacctc 12219
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>gb|AF450493.1|AF450493 Saurothera merlini CUSME1 cytochrome b (cytb) gene, partial cds;
           mitochondrial gene for mitochondrial product
          Length = 1080

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 257 accatcatccacctcaccttc 277
           |||||||||||||||||||||
Sbjct: 520 accatcatccacctcaccttc 540
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>gb|AC022150.6| Homo sapiens chromosome 19 clone CTD-3099C6, complete sequence
          Length = 228156

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 54     aaatcacaccttaaagacata 74
              |||||||||||||||||||||
Sbjct: 214463 aaatcacaccttaaagacata 214443
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>gb|AF495811.1| Sterna antillarum clone B cytochrome b gene, partial cds;
           mitochondrial gene for mitochondrial product
          Length = 362

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 257 accatcatccacctcaccttc 277
           |||||||||||||||||||||
Sbjct: 188 accatcatccacctcaccttc 208
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>gb|AF251534.1|AF251534 Zenaida asiatica specimen-voucher DHC98-001 cytochrome b gene,
           partial cds; and tRNA-Thr gene, partial sequence;
           mitochondrial genes for mitochondrial products
          Length = 1034

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 257 accatcatccacctcaccttc 277
           |||||||||||||||||||||
Sbjct: 447 accatcatccacctcaccttc 467
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>gb|AF251533.1|AF251533 Zenaida asiatica specimen-voucher KPJ97-002 cytochrome b gene,
           partial cds; and tRNA-Thr gene, partial sequence;
           mitochondrial genes for mitochondrial products
          Length = 1068

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 257 accatcatccacctcaccttc 277
           |||||||||||||||||||||
Sbjct: 482 accatcatccacctcaccttc 502
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>gb|AF182699.1|AF182699 Zenaida meloda cytochrome b gene, partial cds; mitochondrial gene
           for mitochondrial product
          Length = 1045

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 257 accatcatccacctcaccttc 277
           |||||||||||||||||||||
Sbjct: 482 accatcatccacctcaccttc 502
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>gb|AF182695.1|AF182695 Streptopelia chinensis cytochrome b gene, partial cds;
           mitochondrial gene for mitochondrial product
          Length = 1042

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 257 accatcatccacctcaccttc 277
           |||||||||||||||||||||
Sbjct: 482 accatcatccacctcaccttc 502
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>gb|AF182694.1|AF182694 Columba livia cytochrome b gene, partial cds; mitochondrial gene
           for mitochondrial product
          Length = 1045

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 257 accatcatccacctcaccttc 277
           |||||||||||||||||||||
Sbjct: 482 accatcatccacctcaccttc 502
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>gb|AF483341.1| Streptopelia chinensis cytochrome b (cytb) gene, partial cds;
           mitochondrial gene for mitochondrial product
          Length = 1044

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 257 accatcatccacctcaccttc 277
           |||||||||||||||||||||
Sbjct: 482 accatcatccacctcaccttc 502
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>dbj|AP006422.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT33E11, TM0310b,
            complete sequence
          Length = 93261

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 96   gatcaattaattataaatgat 116
            |||||||||||||||||||||
Sbjct: 3011 gatcaattaattataaatgat 3031
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>ref|XM_520678.1| PREDICTED: Pan troglodytes similar to Zinc finger protein 219
            (LOC465212), mRNA
          Length = 2606

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 285  cctcctcgggctccaccacctcct 308
            ||||||||| ||||||||||||||
Sbjct: 1603 cctcctcggcctccaccacctcct 1580
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>gb|BC000694.2| Homo sapiens zinc finger protein 219, mRNA (cDNA clone MGC:1124
            IMAGE:3347777), complete cds
          Length = 2709

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 285  cctcctcgggctccaccacctcct 308
            ||||||||| ||||||||||||||
Sbjct: 1344 cctcctcggcctccaccacctcct 1321
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>emb|AL031053.1|HS267M20 Human DNA sequence from clone RP1-267M20 on chromosome Xq22.2-22.3,
             complete sequence
          Length = 167943

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     tgaaaaatttctctattatt 28
             ||||||||||||||||||||
Sbjct: 68467 tgaaaaatttctctattatt 68486
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>gb|BC036105.1| Homo sapiens zinc finger protein 219, mRNA (cDNA clone MGC:33918
            IMAGE:5274736), complete cds
          Length = 2750

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 285  cctcctcgggctccaccacctcct 308
            ||||||||| ||||||||||||||
Sbjct: 1425 cctcctcggcctccaccacctcct 1402
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>gb|BT007678.1| Synthetic construct Homo sapiens zinc finger protein 219 mRNA,
            partial cds
          Length = 2163

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 285  cctcctcgggctccaccacctcct 308
            ||||||||| ||||||||||||||
Sbjct: 1306 cctcctcggcctccaccacctcct 1283
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>gb|BT006956.1| Homo sapiens zinc finger protein 219 mRNA, complete cds
          Length = 2163

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 285  cctcctcgggctccaccacctcct 308
            ||||||||| ||||||||||||||
Sbjct: 1306 cctcctcggcctccaccacctcct 1283
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>emb|CR610917.1| full-length cDNA clone CS0DF013YA19 of Fetal brain of Homo sapiens
           (human)
          Length = 1417

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 285 cctcctcgggctccaccacctcct 308
           ||||||||| ||||||||||||||
Sbjct: 340 cctcctcggcctccaccacctcct 317
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>dbj|AK056261.1| Homo sapiens cDNA FLJ31699 fis, clone NT2RI2006070, highly similar
           to Homo sapiens mRNA for zinc finger protein 219
          Length = 2279

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 285 cctcctcgggctccaccacctcct 308
           ||||||||| ||||||||||||||
Sbjct: 940 cctcctcggcctccaccacctcct 917
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>gb|AC022905.7| Homo sapiens chromosome 8, clone RP11-656G20, complete sequence
          Length = 184311

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 103   taattataaatgatgctgca 122
             ||||||||||||||||||||
Sbjct: 52576 taattataaatgatgctgca 52595
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>gb|AF495812.1| Sterna antillarum clone C cytochrome b gene, partial cds;
           mitochondrial gene for mitochondrial product
          Length = 362

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 257 accatcatccacctcacctt 276
           ||||||||||||||||||||
Sbjct: 188 accatcatccacctcacctt 207
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>gb|AF495810.1| Sterna antillarum clone A cytochrome b gene, partial cds;
           mitochondrial gene for mitochondrial product
          Length = 362

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 257 accatcatccacctcacctt 276
           ||||||||||||||||||||
Sbjct: 188 accatcatccacctcacctt 207
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>gb|AC104753.10| Mus musculus chromosome 7, clone RP24-168P9, complete sequence
          Length = 183931

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 33     attacagaattgaagaaact 52
              ||||||||||||||||||||
Sbjct: 134179 attacagaattgaagaaact 134198
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>gb|AF251531.1|AF251531 Zenaida galapagoensis cytochrome b gene, partial cds; and tRNA-Thr
           gene, partial sequence; mitochondrial genes for
           mitochondrial products
          Length = 1069

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 257 accatcatccacctcacctt 276
           ||||||||||||||||||||
Sbjct: 482 accatcatccacctcacctt 501
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>gb|AF182705.1|AF182705 Ducula bicolor cytochrome b gene, partial cds; mitochondrial gene
           for mitochondrial product
          Length = 1046

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 257 accatcatccacctcaccttcttg 280
           ||||||||||||||||| ||||||
Sbjct: 482 accatcatccacctcacattcttg 505
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>gb|AF182701.1|AF182701 Zenaida galapagoensis cytochrome b gene, partial cds; mitochondrial
           gene for mitochondrial product
          Length = 1045

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 257 accatcatccacctcacctt 276
           ||||||||||||||||||||
Sbjct: 482 accatcatccacctcacctt 501
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>gb|AY631297.1| Sterna antillarum cytochrome b (cytb) gene, partial cds;
           mitochondrial
          Length = 934

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 257 accatcatccacctcacctt 276
           ||||||||||||||||||||
Sbjct: 441 accatcatccacctcacctt 460
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>gb|AY891877.1| Synthetic construct Homo sapiens clone FLH012689.01L zinc finger
            protein 219 (ZNF219) mRNA, partial cds
          Length = 2163

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 285  cctcctcgggctccaccacctcct 308
            ||||||||| ||||||||||||||
Sbjct: 1306 cctcctcggcctccaccacctcct 1283
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>gb|AY889389.1| Synthetic construct Homo sapiens clone FLH012694.01X zinc finger
            protein 219 (ZNF219) mRNA, complete cds
          Length = 2163

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 285  cctcctcgggctccaccacctcct 308
            ||||||||| ||||||||||||||
Sbjct: 1306 cctcctcggcctccaccacctcct 1283
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>gb|AY889388.1| Synthetic construct Homo sapiens clone FLH012693.01X zinc finger
            protein 219 (ZNF219) mRNA, complete cds
          Length = 2163

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 285  cctcctcgggctccaccacctcct 308
            ||||||||| ||||||||||||||
Sbjct: 1306 cctcctcggcctccaccacctcct 1283
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>emb|AL731782.15| Mouse DNA sequence from clone RP23-180G3 on chromosome X, complete
              sequence
          Length = 209800

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 269    ctcaccttcttgggaacctc 288
              ||||||||||||||||||||
Sbjct: 191517 ctcaccttcttgggaacctc 191536
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>emb|AL161668.6|CNS01RHB Human chromosome 14 DNA sequence BAC R-998D10 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 203363

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 285    cctcctcgggctccaccacctcct 308
              ||||||||| ||||||||||||||
Sbjct: 145321 cctcctcggcctccaccacctcct 145344
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>gb|U90649.1|FGU90649 Francolinus gularis cytochrome b (cytb) gene, mitochondrial gene
           encoding mitochondrial protein, partial cds
          Length = 660

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 257 accatcatccacctcaccttcttg 280
           ||||||||||||||||| ||||||
Sbjct: 451 accatcatccacctcacattcttg 474
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>emb|AL157687.6|CNS01RFZ Human chromosome 14 DNA sequence BAC C-2552B11 of library CalTech-D
             from chromosome 14 of Homo sapiens (Human), complete
             sequence
          Length = 197346

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 285   cctcctcgggctccaccacctcct 308
             ||||||||| ||||||||||||||
Sbjct: 82136 cctcctcggcctccaccacctcct 82159
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>ref|XM_670541.1| Plasmodium berghei strain ANKA myosin d (PB000458.01.0), partial mRNA
          Length = 1740

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 97   atcaattaattataaatgat 116
            ||||||||||||||||||||
Sbjct: 1010 atcaattaattataaatgat 1029
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>dbj|AB027122.1| Homo sapiens mRNA for HEIL2, complete cds
          Length = 678

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 9   tgaaaaatttctctattatt 28
           ||||||||||||||||||||
Sbjct: 380 tgaaaaatttctctattatt 399


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,275,788
Number of Sequences: 3902068
Number of extensions: 3275788
Number of successful extensions: 68012
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67922
Number of HSP's gapped (non-prelim): 90
length of query: 339
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 317
effective length of database: 17,147,199,772
effective search space: 5435662327724
effective search space used: 5435662327724
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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