Clone Name | rbart35g04 |
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Clone Library Name | barley_pub |
>UMP3_ARATH (Q9LEV3) Protein At5g10860, mitochondrial precursor| Length = 206 Score = 90.9 bits (224), Expect = 2e-18 Identities = 45/56 (80%), Positives = 49/56 (87%) Frame = -2 Query: 475 VLQAMQLMTDKRIRHIPVISGAQMMGMVSIGDVVRAVVSEHKEELNRLNAFIQGGY 308 VL+AMQLMTD RIRHIPVI M+GMVSIGDVVRAVV EH+EEL RLNA+IQGGY Sbjct: 151 VLRAMQLMTDNRIRHIPVIKDKGMIGMVSIGDVVRAVVHEHREELQRLNAYIQGGY 206
>YR33_THEPE (P15889) Hypothetical 33.4 kDa protein in ribosomal RNA operon| Length = 300 Score = 38.1 bits (87), Expect = 0.012 Identities = 15/40 (37%), Positives = 30/40 (75%) Frame = -2 Query: 475 VLQAMQLMTDKRIRHIPVISGAQMMGMVSIGDVVRAVVSE 356 + + M++M+++RIR +P++SG ++ G+V+I DV+ V E Sbjct: 165 LFEGMRVMSERRIRRLPLVSGEELRGIVTIKDVLSYVSRE 204
>YBP3_ACIAM (P32987) Hypothetical 17.7 kDa protein in bps2 3'region (ORF3)| Length = 164 Score = 35.4 bits (80), Expect = 0.077 Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 1/55 (1%) Frame = -2 Query: 475 VLQAMQLMTDKRIRHIPVI-SGAQMMGMVSIGDVVRAVVSEHKEELNRLNAFIQG 314 V A+ +M + RH+P+I S ++ G+VSI D+ RA++ H + + ++G Sbjct: 85 VTDALDIMLNNGFRHLPIIKSNGKLYGIVSIRDLARALLDVHTMQFGKPAEEVKG 139
>YHCV_BACSU (P54606) Hypothetical protein yhcV| Length = 140 Score = 30.4 bits (67), Expect = 2.5 Identities = 11/30 (36%), Positives = 21/30 (70%) Frame = -2 Query: 466 AMQLMTDKRIRHIPVISGAQMMGMVSIGDV 377 A QLM +IR +P++ ++G+V++GD+ Sbjct: 88 ASQLMAQHQIRRLPIVDQNNLVGIVALGDL 117
>PPAC_THEMA (Q9WZ56) Probable manganese-dependent inorganic pyrophosphatase (EC| 3.6.1.1) (Pyrophosphate phospho-hydrolase) (PPase) Length = 548 Score = 29.3 bits (64), Expect = 5.5 Identities = 13/38 (34%), Positives = 24/38 (63%) Frame = -2 Query: 457 LMTDKRIRHIPVISGAQMMGMVSIGDVVRAVVSEHKEE 344 LM + I+++PV+S +M+G+V+ ++ R V K E Sbjct: 96 LMESRGIKNVPVVSKEKMIGVVTESNIARVYVRRLKIE 133
>Y653_METJA (Q58069) Hypothetical protein MJ0653| Length = 194 Score = 29.3 bits (64), Expect = 5.5 Identities = 10/35 (28%), Positives = 23/35 (65%) Frame = -2 Query: 475 VLQAMQLMTDKRIRHIPVISGAQMMGMVSIGDVVR 371 + +A ++M I+ +PV+ +++G+V+ D+VR Sbjct: 91 ITEAAKIMATHGIKRLPVVKDGELVGIVTQSDIVR 125
>CSAG2_HUMAN (Q9Y5P2) Chondrosarcoma-associated protein 2 (Taxol| resistant-associated protein 3) (TRAG-3) Length = 127 Score = 29.3 bits (64), Expect = 5.5 Identities = 22/74 (29%), Positives = 28/74 (37%) Frame = +3 Query: 180 QVQQPVSTKKHGLFRHHHPGRYCRVHSKGRPANATRRGPGNP*YPPWMKALSRFSSSLCS 359 QV + + GL + R S P RRG G P +ALS+F L Sbjct: 53 QVDWSILLRDAGLVKMSRKPRASSPLSNNHPPTPKRRGSGRHPLNPGPEALSKFPRQL-- 110 Query: 360 LTTARTTSPIETIP 401 R PIE +P Sbjct: 111 ---GREKGPIEEVP 121
>ACE2_SCHPO (O14258) Metallothionein expression activator| Length = 533 Score = 28.9 bits (63), Expect = 7.2 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +3 Query: 207 KHGLFRHHHPGRYCRVHSKGRP 272 K G RHH R+ R+H GRP Sbjct: 479 KAGFVRHHDLKRHLRIHENGRP 500
>PA22_ERIMA (P24294) Phospholipase A2 isozyme PLA-2 (EC 3.1.1.4)| (Phosphatidylcholine 2-acylhydrolase) Length = 121 Score = 28.5 bits (62), Expect = 9.4 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = +3 Query: 201 TKKHGLFRHHHPGRYCRVHSKGRPANATRR 290 T GLF + + G YC + KG+P +AT R Sbjct: 13 TGTFGLFSYVYYGCYCGLGGKGKPLDATDR 42
>PA2A_AGKCA (Q7LZQ4) Phospholipase A2, acidic (EC 3.1.1.4) (Phosphatidylcholine| 2-acylhydrolase) Length = 124 Score = 28.5 bits (62), Expect = 9.4 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = +3 Query: 204 KKHGLFRHHHPGRYCRVHSKGRPANATRR 290 KK G+F + + G YC +GRP +AT R Sbjct: 14 KKSGMFWYSNYGCYCGWGGQGRPQDATDR 42
>PA21B_AGKHP (P14418) Phospholipase A2, acidic (EC 3.1.1.4) (Phosphatidylcholine| 2-acylhydrolase) Length = 124 Score = 28.5 bits (62), Expect = 9.4 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = +3 Query: 204 KKHGLFRHHHPGRYCRVHSKGRPANATRR 290 KK G+F + + G YC +GRP +AT R Sbjct: 14 KKSGMFWYSNYGCYCGWGGQGRPQDATDR 42 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,923,115 Number of Sequences: 219361 Number of extensions: 1176230 Number of successful extensions: 3456 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 3334 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3455 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3188886965 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)