ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart35g01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1STCK_EMENI (Q00706) Putative sterigmatocystin biosynthesis fatty... 30 2.6
2YNK6_YEAST (P50942) Hypothetical 133.3 kDa protein in CYB5-LEU4 ... 29 5.7
3M3K2_MOUSE (Q61083) Mitogen-activated protein kinase kinase kina... 28 9.7

>STCK_EMENI (Q00706) Putative sterigmatocystin biosynthesis fatty acid synthase|
            beta subunit
          Length = 1914

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
 Frame = -1

Query: 215  VVAPVDREREGSWTPDFDRLMA---RSIWSIMHYVMSSCCPIV---ILQMCTGNYVL 63
            ++   +R R  SW P FD L+    R    I H+ M+  C +V   +L+  TG  V+
Sbjct: 1479 IIGDNERTRFCSWAPSFDGLVRANDRLRMEIQHFAMADGCMVVHVRVLKESTGEQVM 1535



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>YNK6_YEAST (P50942) Hypothetical 133.3 kDa protein in CYB5-LEU4 intergenic|
           region
          Length = 1183

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 16/46 (34%), Positives = 21/46 (45%)
 Frame = +3

Query: 120 NIVHNRPNRPCHEAIKIRSPGTLSLSIDRCYNISLDSAFKQGFSSH 257
           N     P  PCHE  K+ S G+   S D     +L    K+GF+ H
Sbjct: 154 NAQEQAPKHPCHELRKLLSNGSFYYSTDFDLTCTLQ---KRGFTEH 196



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>M3K2_MOUSE (Q61083) Mitogen-activated protein kinase kinase kinase 2 (EC|
           2.7.11.25) (MAPK/ERK kinase kinase 2) (MEK kinase 2)
           (MEKK 2)
          Length = 619

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 4/98 (4%)
 Frame = -1

Query: 425 DMDKGTRLMDKGMHSPKTLTCMVMEPMLVIQTTNNQQLHFSRHRHNSEPSPLGLPDMR*E 246
           D+DK   L+D+ +H         M+ + ++   N      S    N EPSP    D+   
Sbjct: 98  DLDKAVELLDRSIH---------MKSLKILLVVNG-----STQATNLEPSP-SPEDLNNT 142

Query: 245 PL-FEGAVEANVVAPVDREREG---SWTPDFDRLMARS 144
           PL  E     +VV P +R+R      + PD    +AR+
Sbjct: 143 PLGAERKKRLSVVGPPNRDRSSPPPGYIPDILHQIARN 180


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,907,145
Number of Sequences: 219361
Number of extensions: 1141635
Number of successful extensions: 2761
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2760
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3304846491
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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