Clone Information

BLAST Search Result

Clone Name	rbart35f07
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	UXS1_RAT (Q5PQX0) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1....	86	5e-17
2	UXS1_PONPY (Q5R885) UDP-glucuronic acid decarboxylase 1 (EC 4.1....	86	5e-17
3	UXS1_MOUSE (Q91XL3) UDP-glucuronic acid decarboxylase 1 (EC 4.1....	86	5e-17
4	UXS1_HUMAN (Q8NBZ7) UDP-glucuronic acid decarboxylase 1 (EC 4.1....	86	5e-17
5	UXS1_BRARE (Q6GMI9) UDP-glucuronic acid decarboxylase 1 (EC 4.1....	84	3e-16
6	UXS1_XENTR (Q6DF08) UDP-glucuronic acid decarboxylase 1 (EC 4.1....	83	6e-16
7	GME2_ORYSA (Q2R1V8) GDP-mannose 3,5-epimerase 2 (EC 5.1.3.18) (G...	49	9e-06
8	FCL1_ORYSA (Q67WR2) Probable GDP-L-fucose synthase 1 (EC 1.1.1.2...	48	2e-05
9	GME1_ORYSA (Q338B5) GDP-mannose 3,5-epimerase 1 (EC 5.1.3.18) (G...	47	5e-05
10	FCL1_ARATH (O49213) GDP-L-fucose synthase 1 (EC 1.1.1.271) (GDP-...	44	3e-04
11	FCL2_ORYSA (Q67WR5) Putative GDP-L-fucose synthase 2 (EC 1.1.1.2...	44	4e-04
12	GME_ARATH (Q93VR3) GDP-mannose 3,5-epimerase (EC 5.1.3.18) (GDP-...	43	7e-04
13	GALE_LACHE (Q7WTB1) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galact...	42	9e-04
14	FCL2_ARATH (Q9LMU0) Putative GDP-L-fucose synthase 2 (EC 1.1.1.2...	42	9e-04
15	GALE_LACCA (O84903) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galact...	37	0.028
16	EXOB_AZOBR (Q59083) UDP-glucose 4-epimerase (EC 5.1.3.2) (UDP-ga...	37	0.037
17	GALE_STRTR (P21977) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galact...	37	0.048
18	GALE_BACSU (P55180) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galact...	37	0.048
19	Y1055_METJA (Q58455) Hypothetical protein MJ1055	37	0.048
20	ARNA_SALTI (Q8Z540) Bifunctional polymyxin resistance arnA prote...	36	0.063
21	ARNA_SALPA (Q5PNA6) Bifunctional polymyxin resistance arnA prote...	36	0.063
22	RFBE_SALTI (P14169) CDP-paratose 2-epimerase (EC 5.1.3.10) (CDP-...	36	0.063
23	GALE_BACHD (Q9KDV3) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galact...	35	0.18
24	ARNA_WIGBR (Q8D341) Bifunctional polymyxin resistance arnA prote...	34	0.24
25	ARNA_ECOL6 (Q8FFM1) Bifunctional polymyxin resistance arnA prote...	34	0.24
26	Y4AF_RHISN (P55353) Hypothetical 34.7 kDa protein y4aF	34	0.31
27	ARNA_SALTY (O52325) Bifunctional polymyxin resistance arnA prote...	33	0.41
28	ARNA_SALCH (P0C0R6) Bifunctional polymyxin resistance arnA prote...	33	0.41
29	ARNA_PSEAE (Q9HY63) Bifunctional polymyxin resistance arnA prote...	33	0.41
30	GALE_STRMU (P96995) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galact...	33	0.53
31	FCL_ECOLI (P32055) GDP-L-fucose synthetase (EC 1.1.1.271) (GDP-4...	33	0.53
32	ARNA_ECOLI (P77398) Bifunctional polymyxin resistance arnA prote...	32	0.90
33	ARNA_ECO57 (Q8XDZ3) Bifunctional polymyxin resistance arnA prote...	32	0.90
34	ARNA_PSEF5 (Q4KC82) Bifunctional polymyxin resistance arnA prote...	32	1.2
35	TGDS_HUMAN (O95455) dTDP-D-glucose 4,6-dehydratase (EC 4.2.1.46)	32	1.5
36	ARNA_SHIFL (Q83QT8) Bifunctional polymyxin resistance arnA prote...	32	1.5
37	EXOB_RHIME (P26503) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galact...	32	1.5
38	GALE_STRLI (P13226) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galact...	32	1.5
39	Y4NL_RHISN (P55584) Hypothetical 38.7 kDa protein y4nL	31	2.0
40	MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, trac...	31	2.6
41	GMD1_ARATH (Q9SNY3) GDP-mannose 4,6 dehydratase 1 (EC 4.2.1.47) ...	30	3.4
42	YCL2_ECO11 (Q04871) Hypothetical 37.6 kDa protein in cld 5'regio...	30	3.4
43	CINA_BACHK (Q6HF34) CinA-like protein	30	3.4
44	CINA_BACCZ (Q636P5) CinA-like protein	30	3.4
45	CINA_BACC1 (Q732U5) CinA-like protein	30	3.4
46	CINA_BACAN (Q81WQ3) CinA-like protein	30	3.4
47	RECO_CHLMU (Q9PJS3) DNA repair protein recO (Recombination prote...	30	4.5
48	FALZ_HUMAN (Q12830) Fetal Alzheimer antigen (Fetal Alz-50-reacti...	30	4.5
49	CAPI_STAAU (P39858) Protein capI	30	4.5
50	ARNA_PHOLL (Q7N3Q7) Bifunctional polymyxin resistance arnA prote...	30	4.5
51	HSP82_ASHGO (Q8J2M3) Heat shock protein HSP82	30	5.9
52	TR2M_AGRTU (P0A3V3) Tryptophan 2-monooxygenase (EC 1.13.12.3)	30	5.9
53	TR2M_AGRT4 (P0A3V2) Tryptophan 2-monooxygenase (EC 1.13.12.3)	30	5.9
54	CINA_BACCR (Q81A15) CinA-like protein	30	5.9
55	NIR_SPIOL (P05314) Ferredoxin--nitrite reductase, chloroplast pr...	30	5.9
56	SEC10_YEAST (Q06245) Exocyst complex component SEC10	29	7.7
57	NU2C_MARPO (P06257) NAD(P)H-quinone oxidoreductase chain 2, chlo...	29	10.0
58	GMDS_HUMAN (O60547) GDP-mannose 4,6 dehydratase (EC 4.2.1.47) (G...	29	10.0
59	ITA6_MOUSE (Q61739) Integrin alpha-6 precursor (VLA-6) (CD49f an...	29	10.0
60	SECA1_MYCLE (P57996) Preprotein translocase secA 1 subunit	29	10.0

>UXS1_RAT (Q5PQX0) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)|
           (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1)
          Length = 420

 Score = 86.3 bits (212), Expect = 5e-17
 Identities = 42/92 (45%), Positives = 58/92 (63%)
 Frame = -3

Query: 548 DMVNGLMKLMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKP 369
           D+VNGL+ LMN + + P+N+GNP E T+LE A+ +K L+     +       DDP++RKP
Sbjct: 304 DLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKP 363

Query: 368 DITKAKEVLDWEPKVVLRDGLVLMEDDFRERL 273
           DI KAK +L WEP V L +GL      FR+ L
Sbjct: 364 DIKKAKLMLGWEPVVPLEEGLNKAIHYFRKEL 395

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>UXS1_PONPY (Q5R885) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)|
           (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1)
          Length = 420

 Score = 86.3 bits (212), Expect = 5e-17
 Identities = 42/92 (45%), Positives = 58/92 (63%)
 Frame = -3

Query: 548 DMVNGLMKLMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKP 369
           D+VNGL+ LMN + + P+N+GNP E T+LE A+ +K L+     +       DDP++RKP
Sbjct: 304 DLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKP 363

Query: 368 DITKAKEVLDWEPKVVLRDGLVLMEDDFRERL 273
           DI KAK +L WEP V L +GL      FR+ L
Sbjct: 364 DIKKAKLMLGWEPVVPLEEGLNKAIHYFRKEL 395

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>UXS1_MOUSE (Q91XL3) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)|
           (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1)
          Length = 420

 Score = 86.3 bits (212), Expect = 5e-17
 Identities = 42/92 (45%), Positives = 58/92 (63%)
 Frame = -3

Query: 548 DMVNGLMKLMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKP 369
           D+VNGL+ LMN + + P+N+GNP E T+LE A+ +K L+     +       DDP++RKP
Sbjct: 304 DLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKP 363

Query: 368 DITKAKEVLDWEPKVVLRDGLVLMEDDFRERL 273
           DI KAK +L WEP V L +GL      FR+ L
Sbjct: 364 DIKKAKLMLGWEPVVPLEEGLNKAIHYFRKEL 395

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>UXS1_HUMAN (Q8NBZ7) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)|
           (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1)
          Length = 420

 Score = 86.3 bits (212), Expect = 5e-17
 Identities = 42/92 (45%), Positives = 58/92 (63%)
 Frame = -3

Query: 548 DMVNGLMKLMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKP 369
           D+VNGL+ LMN + + P+N+GNP E T+LE A+ +K L+     +       DDP++RKP
Sbjct: 304 DLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKP 363

Query: 368 DITKAKEVLDWEPKVVLRDGLVLMEDDFRERL 273
           DI KAK +L WEP V L +GL      FR+ L
Sbjct: 364 DIKKAKLMLGWEPVVPLEEGLNKAIHYFRKEL 395

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>UXS1_BRARE (Q6GMI9) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)|
           (UDP-glucuronate decarboxylase 1) (UXS-1)
          Length = 418

 Score = 83.6 bits (205), Expect = 3e-16
 Identities = 38/81 (46%), Positives = 54/81 (66%)
 Frame = -3

Query: 548 DMVNGLMKLMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKP 369
           D+VNGL+ LMN + + P+N+GNP E T+LE A+ +K L+     +       DDP++R+P
Sbjct: 302 DLVNGLVSLMNSNISSPVNLGNPEEHTILEFAQLIKSLVASRSHIQFLPEAQDDPQRRRP 361

Query: 368 DITKAKEVLDWEPKVVLRDGL 306
           DI KAK +L WEP V L +GL
Sbjct: 362 DIRKAKLLLGWEPVVPLEEGL 382

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>UXS1_XENTR (Q6DF08) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)|
           (UDP-glucuronate decarboxylase 1) (UXS-1)
          Length = 421

 Score = 82.8 bits (203), Expect = 6e-16
 Identities = 39/92 (42%), Positives = 59/92 (64%)
 Frame = -3

Query: 548 DMVNGLMKLMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKP 369
           D+VNGL+ LMN + + P+N+GNP E ++++ A  +K+L+     ++      DDP++RKP
Sbjct: 305 DLVNGLVALMNSNVSSPVNLGNPQEHSIVQFARLIKQLVGSGGEISFLSEAQDDPQRRKP 364

Query: 368 DITKAKEVLDWEPKVVLRDGLVLMEDDFRERL 273
           DI KAK +L WEP V L +GL      FR+ L
Sbjct: 365 DIRKAKLLLGWEPVVPLEEGLNKTIHYFRKEL 396

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>GME2_ORYSA (Q2R1V8) GDP-mannose 3,5-epimerase 2 (EC 5.1.3.18) (GDP-Man|
           3,5-epimerase 2)
          Length = 371

 Score = 48.9 bits (115), Expect = 9e-06
 Identities = 34/102 (33%), Positives = 52/102 (50%)
 Frame = -3

Query: 548 DMVNGLMKLMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKP 369
           + V G+++L   D   P+NIG+    +M E+AE V    N ++ +      P+  R R  
Sbjct: 244 ECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFENKQLPIHHIPG-PEGVRGRNS 302

Query: 368 DITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKKAKA*G 243
           D T  KE L W P + L+DGL +     +E+L   +K KA G
Sbjct: 303 DNTLIKEKLGWAPTMRLKDGLRITYFWIKEQL---EKEKAEG 341

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>FCL1_ORYSA (Q67WR2) Probable GDP-L-fucose synthase 1 (EC 1.1.1.271)|
           (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase
           1)
          Length = 328

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 27/80 (33%), Positives = 46/80 (57%)
 Frame = -3

Query: 497 INIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVL 318
           +N+G+  E T+ ELAE VKE++  +  +    + PD   ++  D +K +E + W+PKV L
Sbjct: 250 VNVGSGSEVTIKELAELVKEVVGFQGKLVWDSSKPDGTPRKLMDSSKIQE-MGWKPKVPL 308

Query: 317 RDGLVLMEDDFRERLAVPKK 258
           ++GLV     + E +   KK
Sbjct: 309 KEGLVETYKWYVENVISAKK 328

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>GME1_ORYSA (Q338B5) GDP-mannose 3,5-epimerase 1 (EC 5.1.3.18) (GDP-Man|
           3,5-epimerase 1) (OsGME-1)
          Length = 378

 Score = 46.6 bits (109), Expect = 5e-05
 Identities = 27/81 (33%), Positives = 42/81 (51%)
 Frame = -3

Query: 548 DMVNGLMKLMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKP 369
           + V G+++L   D   P+NIG+    +M E+AE +    + E+ +      P+  R R  
Sbjct: 251 ECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIILSFEDRELPIHHIPG-PEGVRGRNS 309

Query: 368 DITKAKEVLDWEPKVVLRDGL 306
           D T  KE L W P + L+DGL
Sbjct: 310 DNTLIKEKLGWAPTMKLKDGL 330

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>FCL1_ARATH (O49213) GDP-L-fucose synthase 1 (EC 1.1.1.271)|
           (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase
           1) (AtGER1) (AtFX)
          Length = 312

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 27/64 (42%), Positives = 36/64 (56%)
 Frame = -3

Query: 497 INIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVL 318
           +NIG+  E T+ ELAE VKE++  E  +      PD   ++  D +K    L W PKV L
Sbjct: 236 VNIGSGQEVTIRELAELVKEVVGFEGKLGWDCTKPDGTPRKLMDSSKLAS-LGWTPKVSL 294

Query: 317 RDGL 306
           RDGL
Sbjct: 295 RDGL 298

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>FCL2_ORYSA (Q67WR5) Putative GDP-L-fucose synthase 2 (EC 1.1.1.271)|
           (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase
           2)
          Length = 347

 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 26/76 (34%), Positives = 43/76 (56%)
 Frame = -3

Query: 533 LMKLMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKA 354
           LM+  +G+    +N+G+  E T+ ELAE V+ ++  E  V      P+   +R  D  + 
Sbjct: 256 LMERYSGEEH--VNVGSGEEVTVRELAEAVRGVVGYEGVVAWDAARPEGVARRVVDSGRM 313

Query: 353 KEVLDWEPKVVLRDGL 306
           ++ L WEP+V LRDG+
Sbjct: 314 RK-LGWEPRVALRDGI 328

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>GME_ARATH (Q93VR3) GDP-mannose 3,5-epimerase (EC 5.1.3.18) (GDP-Man|
           3,5-epimerase)
          Length = 377

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 30/102 (29%), Positives = 50/102 (49%)
 Frame = -3

Query: 548 DMVNGLMKLMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKP 369
           + V G+++L   D   P+NIG+    +M E+AE V      ++ +      P+  R R  
Sbjct: 250 ECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPG-PEGVRGRNS 308

Query: 368 DITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKKAKA*G 243
           D    KE L W P + L++GL +     +E++   +K KA G
Sbjct: 309 DNNLIKEKLGWAPNMRLKEGLRITYFWIKEQI---EKEKAKG 347

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>GALE_LACHE (Q7WTB1) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)|
           (UDP-galactose 4-epimerase)
          Length = 330

 Score = 42.4 bits (98), Expect = 9e-04
 Identities = 21/69 (30%), Positives = 35/69 (50%)
 Frame = -3

Query: 533 LMKLMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKA 354
           L  +M  + +   N+G    ++ LE+ E+ K++   ++  TM      DP     D TKA
Sbjct: 237 LKHMMKTNKSDVFNLGTAHGYSNLEILESAKKVTGIDIPYTMGPRRGGDPDSLVADSTKA 296

Query: 353 KEVLDWEPK 327
           + VL W+PK
Sbjct: 297 RTVLGWKPK 305

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>FCL2_ARATH (Q9LMU0) Putative GDP-L-fucose synthase 2 (EC 1.1.1.271)|
           (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase
           2) (AtGER2)
          Length = 328

 Score = 42.4 bits (98), Expect = 9e-04
 Identities = 25/80 (31%), Positives = 42/80 (52%)
 Frame = -3

Query: 497 INIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVL 318
           +N+G+  E T+ ELAE VKE++  +  +      PD   ++  D +K    L W PK+ L
Sbjct: 250 VNVGSGVEVTIKELAELVKEVVGFKGKLVWDTTKPDGTPRKLMDSSKLAS-LGWTPKISL 308

Query: 317 RDGLVLMEDDFRERLAVPKK 258
           +DGL    + + E +   K+
Sbjct: 309 KDGLSQTYEWYLENVVQKKQ 328

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>GALE_LACCA (O84903) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)|
           (UDP-galactose 4-epimerase)
          Length = 331

 Score = 37.4 bits (85), Expect = 0.028
 Identities = 17/62 (27%), Positives = 30/62 (48%)
 Frame = -3

Query: 515 GDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDW 336
           G+ +   NIG+   F+ LE+    +++   E+  TM      DP        KA+++L W
Sbjct: 243 GNKSSAFNIGSAHGFSNLEILNAARKVTGQEIPATMGPRRAGDPSTLIASSEKARDILGW 302

Query: 335 EP 330
           +P
Sbjct: 303 KP 304

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>EXOB_AZOBR (Q59083) UDP-glucose 4-epimerase (EC 5.1.3.2) (UDP-galactose|
           4-epimerase) (Galactowaldenase)
          Length = 348

 Score = 37.0 bits (84), Expect = 0.037
 Identities = 22/80 (27%), Positives = 36/80 (45%)
 Frame = -3

Query: 542 VNGLMKLMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDI 363
           V  L+ L  G  +  +N G     ++ E+   ++E+   +V  T  +  P DP Q     
Sbjct: 242 VLALLHLRRGGGSLLMNCGYGRGASVREVVRTLEEVSGEQVPATFADRRPGDPPQLVAGA 301

Query: 362 TKAKEVLDWEPKVVLRDGLV 303
            + +E L W PK    DG+V
Sbjct: 302 DRIREQLGWVPKHDRLDGIV 321

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>GALE_STRTR (P21977) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)|
           (UDP-galactose 4-epimerase)
          Length = 332

 Score = 36.6 bits (83), Expect = 0.048
 Identities = 17/66 (25%), Positives = 32/66 (48%)
 Frame = -3

Query: 524 LMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEV 345
           L  G+ +   N+G+   F+ L++ E  +++   E+     +  P DP        KA+ V
Sbjct: 241 LRKGNESTAFNLGSSTGFSNLQILEAARKVTGKEIPAEKADRRPGDPDILIASSEKARTV 300

Query: 344 LDWEPK 327
           L W+P+
Sbjct: 301 LGWKPQ 306

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>GALE_BACSU (P55180) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)|
           (UDP-galactose 4-epimerase)
          Length = 339

 Score = 36.6 bits (83), Expect = 0.048
 Identities = 20/72 (27%), Positives = 32/72 (44%)
 Frame = -3

Query: 542 VNGLMKLMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDI 363
           V  L K++N       N+G    +++LE+ +  +++   EV     +  P D      D 
Sbjct: 243 VKALEKVLNSTGADAYNLGTGTGYSVLEMVKAFEKVSGKEVPYRFADRRPGDIATCFADP 302

Query: 362 TKAKEVLDWEPK 327
            KAK  L WE K
Sbjct: 303 AKAKRELGWEAK 314

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>Y1055_METJA (Q58455) Hypothetical protein MJ1055|
          Length = 326

 Score = 36.6 bits (83), Expect = 0.048
 Identities = 19/82 (23%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
 Frame = -3

Query: 548 DMVNGLMKLMNGDNTGPI-NIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRK 372
           D+V+G+++ +  D    I N+GN     ++   E +++ +N +           D  +  
Sbjct: 228 DVVDGILRAIKKDFDYEIFNLGNSKPVKLMYFIELIEKYLNKKAKKKFLPMQDGDVLRTY 287

Query: 371 PDITKAKEVLDWEPKVVLRDGL 306
            D++K++++L ++PKV + +GL
Sbjct: 288 ADLSKSEKLLGYKPKVTIEEGL 309

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>ARNA_SALTI (Q8Z540) Bifunctional polymyxin resistance arnA protein [Includes:|
           UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
           (UDP-GlcUA decarboxylase) (ArnAFT);
           UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC
           2.1.2.-) (UDP-L-Ara4N formyltransferase
          Length = 660

 Score = 36.2 bits (82), Expect = 0.063
 Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 16/97 (16%)
 Frame = -3

Query: 497 INIGNP-GEFTMLELAENVKELIN---------PEVTVTMTENTP------DDPRQRKPD 366
           INIGNP  E ++ ELA  + +  +         P     + E+         D   RKP 
Sbjct: 563 INIGNPDNEASIQELATLLLDSFDKHPLRCHFPPFAGFQVVESRSYYGKGYQDVAHRKPS 622

Query: 365 ITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKKA 255
           I  A+  LDWEP + +RD +    D F   + + ++A
Sbjct: 623 IDNARRCLDWEPSIAMRDTVEETLDFFLRSVDIAERA 659

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>ARNA_SALPA (Q5PNA6) Bifunctional polymyxin resistance arnA protein [Includes:|
           UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
           (UDP-GlcUA decarboxylase) (ArnAFT);
           UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC
           2.1.2.-) (UDP-L-Ara4N formyltransferase
          Length = 660

 Score = 36.2 bits (82), Expect = 0.063
 Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 16/97 (16%)
 Frame = -3

Query: 497 INIGNP-GEFTMLELAENVKELIN---------PEVTVTMTENTP------DDPRQRKPD 366
           INIGNP  E ++ ELA  + +  +         P     + E+         D   RKP 
Sbjct: 563 INIGNPDNEASIQELATLLLDSFDKHPLRCHFPPFAGFQVVESRSYYGKGYQDVAHRKPS 622

Query: 365 ITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKKA 255
           I  A+  LDWEP + +RD +    D F   + + ++A
Sbjct: 623 IDNARRCLDWEPSIAMRDTVEETLDFFLRSVDIAERA 659

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>RFBE_SALTI (P14169) CDP-paratose 2-epimerase (EC 5.1.3.10) (CDP-tyvelose|
           2-epimerase)
          Length = 338

 Score = 36.2 bits (82), Expect = 0.063
 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
 Frame = -3

Query: 494 NIGNP--GEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVV 321
           NIG       ++LEL + +++  N ++  T       D R    DI K    +DW PKV 
Sbjct: 264 NIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPVRESDQRVFVADIKKITNAIDWSPKVS 323

Query: 320 LRDGLVLMED 291
            +DG+  M D
Sbjct: 324 AKDGVQKMYD 333

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>GALE_BACHD (Q9KDV3) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)|
           (UDP-galactose 4-epimerase)
          Length = 334

 Score = 34.7 bits (78), Expect = 0.18
 Identities = 17/66 (25%), Positives = 29/66 (43%)
 Frame = -3

Query: 524 LMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEV 345
           L     +G  N+GN   F++ E+ E  +++    +   +      DP        KA+ +
Sbjct: 239 LRKDGQSGSFNLGNGKGFSVKEVIEVCRQVTGHPIPAEIAPRRSGDPASLIASSEKAQTI 298

Query: 344 LDWEPK 327
           L WEPK
Sbjct: 299 LGWEPK 304

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>ARNA_WIGBR (Q8D341) Bifunctional polymyxin resistance arnA protein [Includes:|
           UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
           (UDP-GlcUA decarboxylase) (ArnAFT);
           UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC
           2.1.2.-) (UDP-L-Ara4N formyltransferase
          Length = 654

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 19/87 (21%)
 Frame = -3

Query: 518 NGDNTGPINIGNP-GEFTMLELAENVKELINPEVTVTMTENTP----------------- 393
           N  N   INIGNP  E+T+++L    K +IN   +     N P                 
Sbjct: 555 NKCNKKIINIGNPHNEYTIMQLT---KIIINIIYSNNRNYNFPKFSGFNMLSGTNYYGEG 611

Query: 392 -DDPRQRKPDITKAKEVLDWEPKVVLR 315
             D  +RKP+I  AK++L+W PK  +R
Sbjct: 612 YQDIDRRKPNIDIAKKLLNWTPKTKIR 638

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>ARNA_ECOL6 (Q8FFM1) Bifunctional polymyxin resistance arnA protein [Includes:|
           UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
           (UDP-GlcUA decarboxylase) (ArnAFT);
           UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC
           2.1.2.-) (UDP-L-Ara4N formyltransferase
          Length = 660

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 16/78 (20%)
 Frame = -3

Query: 497 INIGNP-GEFTMLELAENV---------KELINPEVTVTMTENTP------DDPRQRKPD 366
           INIGNP  E ++ EL E +         +    P     + E++        D   RKP 
Sbjct: 563 INIGNPENEASIEELGEMLLASFEKHPLRHYFPPFAGFRVVESSSYYGKGYQDVEHRKPS 622

Query: 365 ITKAKEVLDWEPKVVLRD 312
           I  A+  LDWEPK+ +++
Sbjct: 623 IRNARRCLDWEPKIDMQE 640

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>Y4AF_RHISN (P55353) Hypothetical 34.7 kDa protein y4aF|
          Length = 314

 Score = 33.9 bits (76), Expect = 0.31
 Identities = 24/85 (28%), Positives = 39/85 (45%)
 Frame = -3

Query: 524 LMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEV 345
           L +   T  INIG+ GE +++ELA  V  ++  +  +    + PD    RK   ++    
Sbjct: 229 LKHYSETEHINIGSGGEISIIELAHIVCRVVGFKGDIVFDTSKPDG-TPRKLLSSERLVS 287

Query: 344 LDWEPKVVLRDGLVLMEDDFRERLA 270
           + W PK  L  GL    + F   +A
Sbjct: 288 MGWRPKTSLELGLAKSYESFVSNVA 312

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>ARNA_SALTY (O52325) Bifunctional polymyxin resistance arnA protein (Polymyxin|
           resistance protein pmrI) [Includes: UDP-glucuronic acid
           decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase)
           (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose
           formyltransferase (EC 2.1
          Length = 660

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 16/97 (16%)
 Frame = -3

Query: 497 INIGNP-GEFTMLELAENVKELIN---------PEVTVTMTENTP------DDPRQRKPD 366
           INIGNP  E ++ ELA  + +  +         P     + E+         D   RKP 
Sbjct: 563 INIGNPDNEASIQELATLLLDSFDKHPLRCHFPPFAGFQVVESRSYYGKGYQDVAHRKPS 622

Query: 365 ITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKKA 255
           I  A+  L WEP + +RD +    D F   + + ++A
Sbjct: 623 IDNARRCLGWEPSIAMRDTVEETLDFFLRSVDIAERA 659

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>ARNA_SALCH (P0C0R6) Bifunctional polymyxin resistance arnA protein [Includes:|
           UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
           (UDP-GlcUA decarboxylase) (ArnAFT);
           UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC
           2.1.2.-) (UDP-L-Ara4N formyltransferase
          Length = 660

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = -3

Query: 389 DPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKKA 255
           D   RKP I  A+  L WEP + +RD +    D F   + V ++A
Sbjct: 615 DVAHRKPSIDNARRCLGWEPSIAMRDTVEETLDFFLRSVDVAERA 659

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>ARNA_PSEAE (Q9HY63) Bifunctional polymyxin resistance arnA protein [Includes:|
           UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
           (UDP-GlcUA decarboxylase) (ArnAFT);
           UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC
           2.1.2.-) (UDP-L-Ara4N formyltransferase
          Length = 662

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = -3

Query: 389 DPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKKAKA 249
           D   RKP I  A+ +LDW+P + LR+ +    D F       ++A+A
Sbjct: 616 DVAHRKPSIDNARRLLDWQPTIELRETIGKTLDFFLHEALREREAQA 662

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>GALE_STRMU (P96995) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)|
           (UDP-galactose 4-epimerase)
          Length = 333

 Score = 33.1 bits (74), Expect = 0.53
 Identities = 16/66 (24%), Positives = 31/66 (46%)
 Frame = -3

Query: 524 LMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEV 345
           L  G+ +   N+G+   F+ L++ E  +++   ++          DP        KA+EV
Sbjct: 242 LRQGNPSTAFNLGSSTGFSNLQILEAARKVTGQKIPAEKAARRSGDPDTLIASSEKAREV 301

Query: 344 LDWEPK 327
           L W+P+
Sbjct: 302 LGWKPQ 307

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>FCL_ECOLI (P32055) GDP-L-fucose synthetase (EC 1.1.1.271)|
           (GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase)
          Length = 321

 Score = 33.1 bits (74), Expect = 0.53
 Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
 Frame = -3

Query: 512 DNTGP----INIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEV 345
           +NT P    IN+G   + T+ ELA+ + +++  +  V    + PD   ++  D+T+  + 
Sbjct: 234 ENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPRKLLDVTRLHQ- 292

Query: 344 LDWEPKVVLRDGL 306
           L W  ++ L  GL
Sbjct: 293 LGWYHEISLEAGL 305

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>ARNA_ECOLI (P77398) Bifunctional polymyxin resistance arnA protein (Polymyxin|
           resistance protein pmrI) [Includes: UDP-glucuronic acid
           decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase)
           (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose
           formyltransferase (EC 2.1
          Length = 660

 Score = 32.3 bits (72), Expect = 0.90
 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 16/78 (20%)
 Frame = -3

Query: 497 INIGNP-GEFTMLELAENV---------KELINPEVTVTMTENTP------DDPRQRKPD 366
           INIGNP  E ++ EL E +         +    P     + E++        D   RKP 
Sbjct: 563 INIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPS 622

Query: 365 ITKAKEVLDWEPKVVLRD 312
           I  A   LDWEPK+ +++
Sbjct: 623 IRNAHRCLDWEPKIDMQE 640

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>ARNA_ECO57 (Q8XDZ3) Bifunctional polymyxin resistance arnA protein [Includes:|
           UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
           (UDP-GlcUA decarboxylase) (ArnAFT);
           UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC
           2.1.2.-) (UDP-L-Ara4N formyltransferase
          Length = 660

 Score = 32.3 bits (72), Expect = 0.90
 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 16/78 (20%)
 Frame = -3

Query: 497 INIGNP-GEFTMLELAENV---------KELINPEVTVTMTENTP------DDPRQRKPD 366
           INIGNP  E ++ EL E +         +    P     + E++        D   RKP 
Sbjct: 563 INIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPS 622

Query: 365 ITKAKEVLDWEPKVVLRD 312
           I  A   LDWEPK+ +++
Sbjct: 623 IRNAHHCLDWEPKIDMQE 640

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>ARNA_PSEF5 (Q4KC82) Bifunctional polymyxin resistance arnA protein [Includes:|
           UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
           (UDP-GlcUA decarboxylase) (ArnAFT);
           UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC
           2.1.2.-) (UDP-L-Ara4N formyltransferase
          Length = 668

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 23/102 (22%)
 Frame = -3

Query: 548 DMVNGLMKLMNGDNT----GPINIGNP-GEFTMLELAENVKELINPEVTVTMTENTP--- 393
           D +  L ++++ +N       INIGNP  E ++ +L E   EL+       +  N P   
Sbjct: 544 DGIEALARIVDNENDCCNGQIINIGNPDNEASIRQLGE---ELLRQFEAHPLRGNFPPFA 600

Query: 392 ---------------DDPRQRKPDITKAKEVLDWEPKVVLRD 312
                           D   RKP I  AK +L+WEP V + +
Sbjct: 601 GFRDVESKAFYGAGYQDVEHRKPSIDNAKRLLNWEPTVEMSE 642

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>TGDS_HUMAN (O95455) dTDP-D-glucose 4,6-dehydratase (EC 4.2.1.46)|
          Length = 350

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 7/97 (7%)
 Frame = -3

Query: 548 DMVNGLMKLMNGDNTGPI-NIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRK 372
           D+V   + ++     G I NIG   E ++++LA+ + +LI    + +  EN  D    R 
Sbjct: 237 DVVEAFLTVLKKGKPGEIYNIGTNFEMSVVQLAKELIQLIKETNSESEMENWVDYVNDRP 296

Query: 371 PDIT----KAKEV--LDWEPKVVLRDGLVLMEDDFRE 279
            +      K++++  L W PKV  ++G+    + +RE
Sbjct: 297 TNDMRYPMKSEKIHGLGWRPKVPWKEGIKKTIEWYRE 333

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>ARNA_SHIFL (Q83QT8) Bifunctional polymyxin resistance arnA protein [Includes:|
           UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
           (UDP-GlcUA decarboxylase) (ArnAFT);
           UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC
           2.1.2.-) (UDP-L-Ara4N formyltransferase
          Length = 660

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 16/78 (20%)
 Frame = -3

Query: 497 INIGNP-GEFTMLELAENV---------KELINPEVTVTMTENTP------DDPRQRKPD 366
           INIGNP  E ++ EL E +         +    P     + E++        D   RKP 
Sbjct: 563 INIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSCYYGKGYQDVEHRKPS 622

Query: 365 ITKAKEVLDWEPKVVLRD 312
           I  A   LDWEPK+ +++
Sbjct: 623 IRNAHRCLDWEPKIDMQE 640

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>EXOB_RHIME (P26503) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)|
          Length = 328

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 16/66 (24%), Positives = 31/66 (46%)
 Frame = -3

Query: 524 LMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEV 345
           L+ G  +  +N+G     T+ EL + ++++      +   E    D      +  KA++V
Sbjct: 242 LLEGGESVALNLGTGTGTTVKELLDAIEKVAKRPFNIGYAERREGDSTTLVANNDKARQV 301

Query: 344 LDWEPK 327
           L WEP+
Sbjct: 302 LGWEPQ 307

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>GALE_STRLI (P13226) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)|
           (UDP-galactose 4-epimerase)
          Length = 329

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 20/78 (25%), Positives = 32/78 (41%)
 Frame = -3

Query: 494 NIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLR 315
           N+GN   F++ E+ E V+ +    +   M      DP         A+E L W P    R
Sbjct: 249 NLGNGNGFSVREVVETVRRVTGHPIPEIMAPRRGRDPAVLVASAGTAREKLGWNPS---R 305

Query: 314 DGLVLMEDDFRERLAVPK 261
             L ++ D +    + PK
Sbjct: 306 ADLAIVSDAWEWHSSHPK 323

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>Y4NL_RHISN (P55584) Hypothetical 38.7 kDa protein y4nL|
          Length = 356

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 12/21 (57%), Positives = 18/21 (85%)
 Frame = -3

Query: 368 DITKAKEVLDWEPKVVLRDGL 306
           DITKA++VL + PK+ LR+G+
Sbjct: 322 DITKARKVLGYAPKIALREGM 342

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>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)|
           (High molecular weight salivary mucin MG1) (Sublingual
           gland mucin)
          Length = 5703

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
 Frame = -1

Query: 340 TGSPRSSYVTAWCSWRTTSGSVWQCPRRPRPKATSLR-LAYITNLPEHTHSWVGSSIFV 167
           T SP +S+ T  CS  T SG +WQC   P P   S++  A+I+   E  +   G   +V
Sbjct: 394 TYSPGTSFNTT-CSSCTCSGGLWQCQDLPCPGTCSVQGGAHISTYDEKLYDLHGDCSYV 451

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>GMD1_ARATH (Q9SNY3) GDP-mannose 4,6 dehydratase 1 (EC 4.2.1.47) (GDP-D-mannose|
           dehydratase 1) (GMD 1)
          Length = 361

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 18/48 (37%), Positives = 26/48 (54%)
 Frame = -3

Query: 395 PDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKKAK 252
           P +    K D +KAKE+L W+PKV     + +M D   E L + K+ K
Sbjct: 303 PTEVDNLKGDASKAKEMLGWKPKVGFEKLVKMMVD---EDLELAKREK 347

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>YCL2_ECO11 (Q04871) Hypothetical 37.6 kDa protein in cld 5'region (ORF2)|
          Length = 334

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 14/63 (22%), Positives = 29/63 (46%)
 Frame = -3

Query: 494 NIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLR 315
           NIGN     +++  + +++ +  E    M    P D  +   D     EV+ + P+  ++
Sbjct: 259 NIGNSSPVELMDYIQALEDALGIEAKKNMLPLQPGDVLETSADTKALYEVIGFTPETTVK 318

Query: 314 DGL 306
           DG+
Sbjct: 319 DGV 321

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>CINA_BACHK (Q6HF34) CinA-like protein|
          Length = 412

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
 Frame = -3

Query: 458 LAENVKELINPEVTVTMTENT-PDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFR 282
           LAENVKEL+  ++ ++ T    PD    ++P        +  EP VV    L       R
Sbjct: 335 LAENVKELLEADIGISFTGVAGPDASEHKEPGTVFVGLAIKDEPTVVFPLNLSGSRQQIR 394

Query: 281 ERLA 270
           ER A
Sbjct: 395 ERSA 398

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>CINA_BACCZ (Q636P5) CinA-like protein|
          Length = 412

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
 Frame = -3

Query: 458 LAENVKELINPEVTVTMTENT-PDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFR 282
           LAENVKEL+  ++ ++ T    PD    ++P        +  EP VV    L       R
Sbjct: 335 LAENVKELLKADIGISFTGVAGPDASEHKEPGTVFVGLAIKDEPTVVFPLNLSGSRQQIR 394

Query: 281 ERLA 270
           ER A
Sbjct: 395 ERSA 398

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>CINA_BACC1 (Q732U5) CinA-like protein|
          Length = 412

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
 Frame = -3

Query: 458 LAENVKELINPEVTVTMTENT-PDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFR 282
           LAENVKEL+  ++ ++ T    PD    ++P        +  EP VV    L       R
Sbjct: 335 LAENVKELLKADIGISFTGVAGPDASEHKEPGTVFVGLAIKDEPTVVFPLNLSGSRQQIR 394

Query: 281 ERLA 270
           ER A
Sbjct: 395 ERSA 398

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>CINA_BACAN (Q81WQ3) CinA-like protein|
          Length = 412

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
 Frame = -3

Query: 458 LAENVKELINPEVTVTMTENT-PDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFR 282
           LAENVKEL+  ++ ++ T    PD    ++P        +  EP VV    L       R
Sbjct: 335 LAENVKELLEADIGISFTGVAGPDASEHKEPGTVFVGLAIKDEPTVVFPLNLSGSRQQIR 394

Query: 281 ERLA 270
           ER A
Sbjct: 395 ERSA 398

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>RECO_CHLMU (Q9PJS3) DNA repair protein recO (Recombination protein O)|
          Length = 234

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 10/77 (12%)
 Frame = -1

Query: 367 TSQRQRRFLTGSPRSSYVTAWCSWRTTSGS----------VWQCPRRPRPKATSLRLAYI 218
           T  + R+ L G  ++ + T   S+R    +           WQ   +P P+  SL L ++
Sbjct: 62  TPPKMRKVLQGELKNPFTTIKNSYRLLQSTGKMIQAILKTQWQ--EKPSPQLFSLFLNFL 119

Query: 217 TNLPEHTHSWVGSSIFV 167
             +PE  H +  SS+F+
Sbjct: 120 QRIPETPHPYFFSSMFL 136

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>FALZ_HUMAN (Q12830) Fetal Alzheimer antigen (Fetal Alz-50-reactive clone 1)|
          Length = 810

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
 Frame = +3

Query: 408 HRHCHLWVDQLLHVLSKF---QHGEFTWVPNVNGSSVVSIHQLHKTIDHI 548
           HR  H   D+  H+  KF     GEF W  +V+GS V++I  L  TI  +
Sbjct: 728 HREDH---DKRRHLAHKFCLTPAGEFKWNGSVHGSKVLTISTLRLTITQL 774

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>CAPI_STAAU (P39858) Protein capI|
          Length = 334

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 15/72 (20%), Positives = 32/72 (44%)
 Frame = -3

Query: 494 NIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLR 315
           NIGN     ++E  E ++  +  E      +  P D  +   ++      +D++P+  ++
Sbjct: 259 NIGNNSPVRLMEFVEAIENKLGKEARKNYMDLQPGDVPETYANVDDLFRDIDFKPETTIQ 318

Query: 314 DGLVLMEDDFRE 279
           DG+    D + E
Sbjct: 319 DGVNKFVDWYLE 330

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>ARNA_PHOLL (Q7N3Q7) Bifunctional polymyxin resistance arnA protein [Includes:|
           UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
           (UDP-GlcUA decarboxylase) (ArnAFT);
           UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC
           2.1.2.-) (UDP-L-Ara4N formyltransferase
          Length = 660

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 16/77 (20%)
 Frame = -3

Query: 497 INIGNP-GEFTMLELAE---------NVKELINPEVTVTMTENTP------DDPRQRKPD 366
           INIGNP  E ++ +LAE          +++   P       E+         D   RKP 
Sbjct: 563 INIGNPTNEASIRQLAEILLDSFEDHELRDHFPPFAGFKKVESGSYYGKGYQDVEHRKPS 622

Query: 365 ITKAKEVLDWEPKVVLR 315
           I  A+ +LDW+P + ++
Sbjct: 623 IKNAERLLDWKPTIDMK 639

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>HSP82_ASHGO (Q8J2M3) Heat shock protein HSP82|
          Length = 704

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 19/69 (27%), Positives = 32/69 (46%)
 Frame = -3

Query: 461 ELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFR 282
           ++ ENVKEL     T  +    P +  Q + +        DWE  + ++   V  + +FR
Sbjct: 254 KVKENVKELEELNKTKPLWTRNPSEVTQEEYNAFYKSISNDWEDPLAVKHFSVEGQLEFR 313

Query: 281 ERLAVPKKA 255
             L +PK+A
Sbjct: 314 AILFIPKRA 322

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>TR2M_AGRTU (P0A3V3) Tryptophan 2-monooxygenase (EC 1.13.12.3)|
          Length = 755

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 24/61 (39%), Positives = 29/61 (47%), Gaps = 12/61 (19%)
 Frame = -3

Query: 365 ITKAKEVLDWEPKVVLRDGLVLM----EDDFRERLAVPKKAK--------A*GHFPAFGV 222
           I KA   LD+EP+     GLVL+    EDD  + LAVP K +            FPAF  
Sbjct: 586 IAKAVYCLDYEPQDPNGKGLVLISYTWEDDSHKLLAVPDKKERLCLLRDAISRSFPAFAQ 645

Query: 221 H 219
           H
Sbjct: 646 H 646

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>TR2M_AGRT4 (P0A3V2) Tryptophan 2-monooxygenase (EC 1.13.12.3)|
          Length = 755

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 24/61 (39%), Positives = 29/61 (47%), Gaps = 12/61 (19%)
 Frame = -3

Query: 365 ITKAKEVLDWEPKVVLRDGLVLM----EDDFRERLAVPKKAK--------A*GHFPAFGV 222
           I KA   LD+EP+     GLVL+    EDD  + LAVP K +            FPAF  
Sbjct: 586 IAKAVYCLDYEPQDPNGKGLVLISYTWEDDSHKLLAVPDKKERLCLLRDAISRSFPAFAQ 645

Query: 221 H 219
           H
Sbjct: 646 H 646

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>CINA_BACCR (Q81A15) CinA-like protein|
          Length = 412

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
 Frame = -3

Query: 458 LAENVKELINPEVTVTMTENT-PDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFR 282
           LAENVK+++  ++ ++ T    PD   Q++P        +  EP VV    L       R
Sbjct: 335 LAENVKDVLKADIGISFTGVAGPDASEQKEPGTVFVGLSIKDEPTVVFPLNLSGSRQQIR 394

Query: 281 ERLA 270
           ER A
Sbjct: 395 ERTA 398

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>NIR_SPIOL (P05314) Ferredoxin--nitrite reductase, chloroplast precursor (EC|
           1.7.7.1)
          Length = 594

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 19/83 (22%), Positives = 36/83 (43%)
 Frame = -3

Query: 500 PINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVV 321
           P+N   P   T+L  + N +   N  +      +   +     P +  A+     EP+V 
Sbjct: 5   PVNKIIPSSTTLLSSSNNNRRRNNSSIRCQKAVSPAAETAAVSPSVDAAR----LEPRVE 60

Query: 320 LRDGLVLMEDDFRERLAVPKKAK 252
            RDG  +++++FR  +   +K K
Sbjct: 61  ERDGFWVLKEEFRSGINPAEKVK 83

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>SEC10_YEAST (Q06245) Exocyst complex component SEC10|
          Length = 871

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = -3

Query: 521 MNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDP 384
           +N  NT   +  N    T  ++A N   L+N   T +  +N+P+ P
Sbjct: 520 LNRTNTLSDSFNNSSSSTQYDVANNSSSLVNSSFTASDIDNSPNSP 565

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>NU2C_MARPO (P06257) NAD(P)H-quinone oxidoreductase chain 2, chloroplast (EC|
           1.6.5.-) (NAD(P)H dehydrogenase, chain 2)
           (NADH-plastoquinone oxidoreductase chain 2)
          Length = 501

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
 Frame = +1

Query: 346 TSFAFVMSGFLWR-GSSGVFSVIVTVTSGLINSFTFSASSSMV 471
           TS + +  GF W  G SG  + I  +T+GL+N+ T+++S + +
Sbjct: 172 TSSSILAYGFSWLYGLSGGETNIQKITNGLLNAETYNSSGTFI 214

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>GMDS_HUMAN (O60547) GDP-mannose 4,6 dehydratase (EC 4.2.1.47) (GDP-D-mannose|
           dehydratase) (GMD)
          Length = 372

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -3

Query: 443 KELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKV 324
           KE     VTV +    P +    + D TKAK+ L+W+P+V
Sbjct: 310 KETGKVHVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRV 349

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>ITA6_MOUSE (Q61739) Integrin alpha-6 precursor (VLA-6) (CD49f antigen)|
           [Contains: Integrin alpha-6 heavy chain; Integrin
           alpha-6 light chain]
          Length = 1091

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
 Frame = -3

Query: 488 GNPGEFTMLELAENVKELINP-------EVTVTMTENTPDDPRQRKPDITKAKEVLDWEP 330
           GN  +F+ L + + + EL+         E+TVT + + P +PR+   D  +AK +  +  
Sbjct: 647 GNQDKFSYLPIQKGIPELVLKDQKDIALEITVTNSPSDPRNPRKDGDDAHEAKLIATFPD 706

Query: 329 KVVLRDGLVLMEDDFRERLAVPKK 258
                    L    +RE  A P+K
Sbjct: 707 --------TLTYSAYRELRAFPEK 722

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>SECA1_MYCLE (P57996) Preprotein translocase secA 1 subunit|
          Length = 940

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 12/34 (35%), Positives = 23/34 (67%)
 Frame = -3

Query: 359 KAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKK 258
           KAKE+ + +   ++RDG VL+ D+F  R+ + ++
Sbjct: 296 KAKELFNRDKDYIVRDGEVLIVDEFTGRVLIGRR 329


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,721,619
Number of Sequences: 219361
Number of extensions: 1761098
Number of successful extensions: 5126
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 4964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5120
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4430660157
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result