ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbart35f05 |
|---|---|
| Clone Library Name | barley_pub |
>EI2BA_YEAST (P14741) Translation initiation factor eIF-2B alpha subunit (eIF-2B| GDP-GTP exchange factor) (Guanine nucleotide exchange factor subunit GCN3) (GCD complex subunit GCN3) (Transcriptional activator GCN3) Length = 305 Score = 95.5 bits (236), Expect = 8e-20 Identities = 51/115 (44%), Positives = 70/115 (60%), Gaps = 4/115 (3%) Frame = -2 Query: 527 EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPLYVAAESYKFARLYPLDQKDMTP 348 +VD VFVGA+GV ESGGIIN++GTY + ++AH+ KP YV ES+KF R++PL D+ Sbjct: 190 KVDKVFVGAEGVAESGGIINLVGTYSVGVLAHNARKPFYVVTESHKFVRMFPLSSDDLPM 249 Query: 347 AHRPIDFGVPIPAGVEVETSAR----DYTPPQYXXXXXXXXXXXTPSVVSDELIQ 195 A P+DF ++E + R DYT +Y TPS VS+ELI+ Sbjct: 250 AGPPLDF---TRRTDDLEDALRGPTIDYTAQEYITALITDLGVLTPSAVSEELIK 301
>EI2BA_RAT (Q64270) Translation initiation factor eIF-2B alpha subunit (eIF-2B| GDP-GTP exchange factor) Length = 305 Score = 91.3 bits (225), Expect = 1e-18 Identities = 53/114 (46%), Positives = 71/114 (62%), Gaps = 3/114 (2%) Frame = -2 Query: 527 EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPLYVAAESYKFARLYPLDQKDMTP 348 +VD+V VGA+GVVE+GGIIN +GT Q+A+ A + NKP YV AES+KF RL+PL+Q+D+ Sbjct: 189 KVDLVIVGAEGVVENGGIINKIGTNQMAVCAKAQNKPFYVVAESFKFVRLFPLNQQDVPD 248 Query: 347 AHR-PIDFGVPIPAGVEV--ETSARDYTPPQYXXXXXXXXXXXTPSVVSDELIQ 195 + D + AG ++ E DYT P TPS VSDELI+ Sbjct: 249 KFKYKADTLKSVQAGQDLKEEHPWVDYTSPSLITLLFTDLGVLTPSAVSDELIK 302
>EI2BA_MOUSE (Q99LC8) Translation initiation factor eIF-2B alpha subunit (eIF-2B| GDP-GTP exchange factor) Length = 305 Score = 88.2 bits (217), Expect = 1e-17 Identities = 51/114 (44%), Positives = 69/114 (60%), Gaps = 3/114 (2%) Frame = -2 Query: 527 EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPLYVAAESYKFARLYPLDQKDMTP 348 + D+V VGA+GVVE+GGIIN +GT Q+A+ A + NKP YV AES+KF RL+PL+Q+D+ Sbjct: 189 KADLVIVGAEGVVENGGIINKIGTNQMAVCAKAQNKPFYVVAESFKFVRLFPLNQEDVPD 248 Query: 347 AHR-PIDFGVPIPAGVEV--ETSARDYTPPQYXXXXXXXXXXXTPSVVSDELIQ 195 + D + G ++ E DYT P TPS VSDELI+ Sbjct: 249 KFKYKADTLKSVQTGQDLKEEHPWVDYTSPSLITLLFTDLGVLTPSAVSDELIK 302
>EI2BA_HUMAN (Q14232) Translation initiation factor eIF-2B alpha subunit (eIF-2B| GDP-GTP exchange factor) Length = 305 Score = 86.3 bits (212), Expect = 5e-17 Identities = 51/114 (44%), Positives = 68/114 (59%), Gaps = 3/114 (2%) Frame = -2 Query: 527 EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPLYVAAESYKFARLYPLDQKDMTP 348 + D+V VGA+GVVE+GGIIN +GT Q+A+ A + NKP YV AES+KF RL+PL+Q+D+ Sbjct: 189 KADLVIVGAEGVVENGGIINKIGTNQMAVCAKAQNKPFYVVAESFKFVRLFPLNQQDVPD 248 Query: 347 AHR-PIDFGVPIPAGVEV--ETSARDYTPPQYXXXXXXXXXXXTPSVVSDELIQ 195 + D G ++ E DYT P TPS VSDELI+ Sbjct: 249 KFKYKADTLKVAQTGQDLKEEHPWVDYTAPSLITLLFTDLGVLTPSAVSDELIK 302
>EI2BA_MACFA (Q4R4V8) Translation initiation factor eIF-2B alpha subunit (eIF-2B| GDP-GTP exchange factor) Length = 305 Score = 84.7 bits (208), Expect = 1e-16 Identities = 50/114 (43%), Positives = 67/114 (58%), Gaps = 3/114 (2%) Frame = -2 Query: 527 EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPLYVAAESYKFARLYPLDQKDMTP 348 + D+V VGA+GVVE+GGIIN +GT Q+A+ A + NKP Y AES+KF RL+PL+Q+D+ Sbjct: 189 KADLVIVGAEGVVENGGIINKIGTNQMAVCAKAQNKPFYAVAESFKFVRLFPLNQQDVPD 248 Query: 347 AHR-PIDFGVPIPAGVEV--ETSARDYTPPQYXXXXXXXXXXXTPSVVSDELIQ 195 + D G ++ E DYT P TPS VSDELI+ Sbjct: 249 KFKYKADTLKVAQTGQDLKEEHPWVDYTAPSLITLLFTDLGVLTPSAVSDELIK 302
>EI2BA_SCHPO (Q9USP0) Translation initiation factor eIF-2B alpha subunit (eIF-2B| GDP-GTP exchange factor) Length = 341 Score = 80.1 bits (196), Expect = 3e-15 Identities = 41/78 (52%), Positives = 55/78 (70%), Gaps = 1/78 (1%) Frame = -2 Query: 524 VDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPLYVAAESYKFARLYPLDQKDMTPA 345 VD+V VGA+GVVE+GG+IN +GT+Q+A+ A +KP Y AES+KF R++PL Q D+ P Sbjct: 204 VDLVLVGAEGVVENGGLINQIGTFQLAVFAKHAHKPFYAVAESHKFVRMFPLSQYDI-PF 262 Query: 344 HRPI-DFGVPIPAGVEVE 294 RPI +F P P V E Sbjct: 263 SRPILEFDDPSPETVHPE 280
>EI2BA_CAEEL (P34604) Putative translation initiation factor eIF-2B alpha| subunit (eIF-2B GDP-GTP exchange factor) Length = 305 Score = 75.9 bits (185), Expect = 6e-14 Identities = 41/110 (37%), Positives = 61/110 (55%) Frame = -2 Query: 524 VDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPLYVAAESYKFARLYPLDQKDMTPA 345 + V VGA+GV+E+GGIIN +GT + ++A S + P+YV AE+ KF R +PL+Q D+ P Sbjct: 194 IQAVLVGAEGVMETGGIINKIGTVNVCIIAKSRHVPVYVCAETIKFVREFPLNQADI-PQ 252 Query: 344 HRPIDFGVPIPAGVEVETSARDYTPPQYXXXXXXXXXXXTPSVVSDELIQ 195 V +E+E DYT P++ P V +ELI+ Sbjct: 253 EFKYRTSVIERNNLELEHPDVDYTAPEFLTLIITDVGAMKPEAVGEELIK 302
>EI2B2_ARCFU (O28242) Putative translation initiation factor eIF-2B subunit 2| (eIF-2B GDP-GTP exchange factor) Length = 313 Score = 57.8 bits (138), Expect = 2e-08 Identities = 37/95 (38%), Positives = 50/95 (52%), Gaps = 6/95 (6%) Frame = -2 Query: 527 EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPLYVAAESYKFA------RLYPLD 366 EVD V VGAD + +G +IN +GT QIAL A P VAAE+YKF+ L ++ Sbjct: 181 EVDCVVVGADTITANGALINKIGTSQIALAAKEARVPFMVAAETYKFSPKTLFGELVVIE 240 Query: 365 QKDMTPAHRPIDFGVPIPAGVEVETSARDYTPPQY 261 ++D R + + GV+V A D TP Y Sbjct: 241 ERDA----REVAPEEILKLGVKVRNPAFDVTPRDY 271
>EI2B2_METJA (Q57586) Putative translation initiation factor eIF-2B subunit 2| (eIF-2B GDP-GTP exchange factor) Length = 308 Score = 54.3 bits (129), Expect = 2e-07 Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 2/91 (2%) Frame = -2 Query: 527 EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPLYVAAESYKFARLYPLDQKDMTP 348 E+D+V VGAD + +G ++N +GT QIAL+A+ P AAE+YKF + + Sbjct: 189 EIDIVVVGADAITANGCLVNKIGTSQIALIANESRVPFLTAAETYKFHPKTIVGELIEIE 248 Query: 347 AHRPIDFGV--PIPAGVEVETSARDYTPPQY 261 P + V G+++ A D TP +Y Sbjct: 249 ERSPEEVAVFEDKYKGIKIRNPAFDVTPAKY 279
>EI2B2_PYRFU (Q8U4G6) Putative translation initiation factor eIF-2B subunit 2| (eIF-2B GDP-GTP exchange factor) Length = 324 Score = 52.0 bits (123), Expect = 1e-06 Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 6/93 (6%) Frame = -2 Query: 521 DMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPLYVAAESYKF------ARLYPLDQK 360 D V +GAD + +G +IN +GT IAL A + +AAE+YKF +L ++ + Sbjct: 197 DKVVMGADSITANGAVINQIGTALIALTAKEHRVWVMIAAETYKFHPETMLGQLVEIEMR 256 Query: 359 DMTPAHRPIDFGVPIPAGVEVETSARDYTPPQY 261 D T P + P +EV A D TPP+Y Sbjct: 257 DPTEV-VPKEELETWPKNIEVLNPAFDVTPPEY 288
>EI2B2_PYRAB (Q9V281) Putative translation initiation factor eIF-2B subunit 2| (eIF-2B GDP-GTP exchange factor) Length = 324 Score = 51.6 bits (122), Expect = 1e-06 Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 6/93 (6%) Frame = -2 Query: 521 DMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPLYVAAESYKF------ARLYPLDQK 360 D V +GAD + +G +IN +GT IAL A + +AAE+YKF +L ++ + Sbjct: 197 DKVVMGADSITANGAVINKIGTSLIALTAKEHRVWVMIAAETYKFHPETMLGQLVEIEMR 256 Query: 359 DMTPAHRPIDFGVPIPAGVEVETSARDYTPPQY 261 D T P + P +EV A D TPP+Y Sbjct: 257 DPTEV-IPEEELKTWPKNIEVWNPAFDVTPPEY 288
>EI2B2_PYRHO (O57947) Putative translation initiation factor eIF-2B subunit 2| (eIF-2B GDP-GTP exchange factor) Length = 324 Score = 51.2 bits (121), Expect = 2e-06 Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 6/93 (6%) Frame = -2 Query: 521 DMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPLYVAAESYKF------ARLYPLDQK 360 D V +GAD + +G +IN +GT IAL A + +AAE+YKF +L ++ + Sbjct: 197 DKVVMGADSITANGAVINKIGTSLIALTAKEHRVWVMIAAETYKFHPATMLGQLVEIEMR 256 Query: 359 DMTPAHRPIDFGVPIPAGVEVETSARDYTPPQY 261 D T P + P +EV A D TPP+Y Sbjct: 257 DPTEV-IPEEELRTWPKNIEVWNPAFDVTPPEY 288
>EI2BL_PYRHO (O58185) Putative translation initiation factor eIF-2B subunit| 2-like (eIF-2B GDP-GTP exchange factor) Length = 276 Score = 49.7 bits (117), Expect = 5e-06 Identities = 22/47 (46%), Positives = 29/47 (61%) Frame = -2 Query: 527 EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPLYVAAESYKF 387 E + VGAD + + G ++N GTY +AL H P YVAAE+YKF Sbjct: 177 EASIAIVGADMITKDGYVVNKAGTYLLALACHENAIPFYVAAETYKF 223
>EI2BL_PYRAB (Q9UYB6) Putative translation initiation factor eIF-2B subunit| 2-like (eIF-2B GDP-GTP exchange factor) Length = 276 Score = 49.3 bits (116), Expect = 6e-06 Identities = 22/41 (53%), Positives = 27/41 (65%) Frame = -2 Query: 509 VGADGVVESGGIINMMGTYQIALVAHSMNKPLYVAAESYKF 387 VGAD V G ++N GTY +AL H + P YVAAE+YKF Sbjct: 183 VGADMVTRDGFVVNKAGTYLLALACHESDVPFYVAAETYKF 223
>EI2BL_PYRFU (Q8U3J1) Putative translation initiation factor eIF-2B subunit| 2-like (eIF-2B GDP-GTP exchange factor) Length = 276 Score = 48.5 bits (114), Expect = 1e-05 Identities = 23/65 (35%), Positives = 37/65 (56%) Frame = -2 Query: 527 EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPLYVAAESYKFARLYPLDQKDMTP 348 + + VGAD V + G ++N GTY +A+ + P YVAAE+YKF + + K++ Sbjct: 177 DATLAIVGADTVTKDGYVVNKAGTYLLAISCYESEVPFYVAAETYKFHQ--KITSKEVEL 234 Query: 347 AHRPI 333 RP+ Sbjct: 235 VERPL 239
>MTNA_SYNY3 (P74497) Probable methylthioribose-1-phosphate isomerase (EC| 5.3.1.23) (MTR-1-P isomerase) Length = 351 Score = 46.2 bits (108), Expect = 5e-05 Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 6/112 (5%) Frame = -2 Query: 524 VDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPLYVAA--ESYKFA----RLYPLDQ 363 +D V VGAD + +G I N +GTY +A++A P +VAA + FA P+++ Sbjct: 238 IDAVVVGADRIARNGDIANKIGTYGLAVLAKMHAIPFFVAAPLSTVDFALDDGSQIPIEE 297 Query: 362 KDMTPAHRPIDFGVPIPAGVEVETSARDYTPPQYXXXXXXXXXXXTPSVVSD 207 +D ++P + P G E A D TP P ++D Sbjct: 298 RDPVEIYQPEGNRI-TPEGAEFYNPAFDVTPASLITAIITEQGAIAPEKLAD 348
>EI2BD_SCHPO (Q09924) Probable translation initiation factor eIF-2B delta| subunit (eIF-2B GDP-GTP exchange factor) Length = 467 Score = 45.8 bits (107), Expect = 7e-05 Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 3/72 (4%) Frame = -2 Query: 527 EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPLYVAAESYKFARLYPLDQ---KD 357 EV +F+G ++ +G + + GT I+L+ H N P+ ESYKF LD + Sbjct: 335 EVTKIFLGGHAMLSNGALYSRAGTSLISLLGHESNVPVIACCESYKFTERIQLDSLVYNE 394 Query: 356 MTPAHRPIDFGV 321 + P + ++ GV Sbjct: 395 LAPGDQLVNMGV 406
>EI2BD_RABIT (P41111) Translation initiation factor eIF-2B delta subunit (eIF-2B| GDP-GTP exchange factor) Length = 523 Score = 45.4 bits (106), Expect = 9e-05 Identities = 21/54 (38%), Positives = 33/54 (61%) Frame = -2 Query: 527 EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPLYVAAESYKFARLYPLD 366 EV V +GA ++ +G +++ +GT Q+ALVA + N P+ V E+YKF D Sbjct: 397 EVSKVLLGAHALLANGSVMSRVGTAQLALVARAHNVPVLVCCETYKFCERVQTD 450
>EI2BD_HUMAN (Q9UI10) Translation initiation factor eIF-2B delta subunit (eIF-2B| GDP-GTP exchange factor) Length = 523 Score = 45.4 bits (106), Expect = 9e-05 Identities = 21/54 (38%), Positives = 33/54 (61%) Frame = -2 Query: 527 EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPLYVAAESYKFARLYPLD 366 EV V +GA ++ +G +++ +GT Q+ALVA + N P+ V E+YKF D Sbjct: 397 EVSKVLLGAHALLANGSVMSRVGTAQLALVARAHNVPVLVCCETYKFCERVQTD 450
>EI2BD_RAT (Q63186) Translation initiation factor eIF-2B delta subunit (eIF-2B| GDP-GTP exchange factor) Length = 524 Score = 45.4 bits (106), Expect = 9e-05 Identities = 21/54 (38%), Positives = 33/54 (61%) Frame = -2 Query: 527 EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPLYVAAESYKFARLYPLD 366 EV V +GA ++ +G +++ +GT Q+ALVA + N P+ V E+YKF D Sbjct: 398 EVSKVLLGAHALLANGSVMSRVGTAQLALVARAHNVPVLVCCETYKFCERVQTD 451
>EI2BD_MOUSE (Q61749) Translation initiation factor eIF-2B delta subunit (eIF-2B| GDP-GTP exchange factor) Length = 524 Score = 45.4 bits (106), Expect = 9e-05 Identities = 21/54 (38%), Positives = 33/54 (61%) Frame = -2 Query: 527 EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPLYVAAESYKFARLYPLD 366 EV V +GA ++ +G +++ +GT Q+ALVA + N P+ V E+YKF D Sbjct: 398 EVSKVLLGAHALLANGSVMSRVGTAQLALVARAHNVPVLVCCETYKFCERVQTD 451
>EI2B1_METJA (Q57896) Putative translation initiation factor eIF-2B subunit 1| (eIF-2B GDP-GTP exchange factor) Length = 329 Score = 44.7 bits (104), Expect = 2e-04 Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 8/95 (8%) Frame = -2 Query: 527 EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPLYVAA--------ESYKFARLYP 372 E+D + VGAD ++ G + N +GTY +A++A P YVAA S + + Sbjct: 214 EIDKIIVGADRILADGTVYNKIGTYSLAVLAKYHRIPFYVAAPLSTFDLRSSEEDVIIEE 273 Query: 371 LDQKDMTPAHRPIDFGVPIPAGVEVETSARDYTPP 267 D+K++ ID +P GV A D TPP Sbjct: 274 RDEKEVA----YIDGVRIVPEGVGCYNYAFDKTPP 304
>EI2B_AQUAE (O67879) Putative translation initiation factor eIF-2B (eIF-2B| GDP-GTP exchange factor) Length = 456 Score = 43.5 bits (101), Expect = 4e-04 Identities = 19/41 (46%), Positives = 26/41 (63%) Frame = -2 Query: 524 VDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPLYVAA 402 VD+V VGAD + G + N +GTY +A++ N P YVAA Sbjct: 342 VDLVIVGADRITAKGDVANKIGTYTLAVLCKEHNVPFYVAA 382
>MTNA_BACSU (O31662) Methylthioribose-1-phosphate isomerase (EC 5.3.1.23)| (MTR-1-P isomerase) Length = 353 Score = 43.1 bits (100), Expect = 5e-04 Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 6/92 (6%) Frame = -2 Query: 527 EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPLYVAA------ESYKFARLYPLD 366 ++ V VGAD + ++G N +GTY +A++A++ + P +VAA K P++ Sbjct: 231 QISAVIVGADRIAKNGDTANKIGTYGLAILANAFDIPFFVAAPLSTFDTKVKCGADIPIE 290 Query: 365 QKDMTPAHRPIDFGVPIPAGVEVETSARDYTP 270 ++D R I P+ V V A D TP Sbjct: 291 ERDPEEV-RQISGVRTAPSNVPVFNPAFDITP 321
>EI2B1_PYRAB (Q9UZ16) Putative translation initiation factor eIF-2B subunit 1| (eIF-2B GDP-GTP exchange factor) Length = 356 Score = 43.1 bits (100), Expect = 5e-04 Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 6/94 (6%) Frame = -2 Query: 524 VDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPLYVAAE------SYKFARLYPLDQ 363 VD + VGAD +V +G N +GTY +A++A P + A S K + P+++ Sbjct: 239 VDAIIVGADRIVANGDFANKIGTYMLAVLAREHGIPFFAVAPLSSIDMSLKSGKEIPIEE 298 Query: 362 KDMTPAHRPIDFGVPIPAGVEVETSARDYTPPQY 261 + +P G I V V A D TP +Y Sbjct: 299 R--SPEEVLTCGGCRIAPDVPVYNPAFDVTPHKY 330
>EI2B1_METTH (O27900) Putative translation initiation factor eIF-2B subunit 1| (eIF-2B GDP-GTP exchange factor) Length = 311 Score = 43.1 bits (100), Expect = 5e-04 Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 4/89 (4%) Frame = -2 Query: 524 VDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPLYVAAESYKF---ARLYPLDQKDM 354 +D V +GAD + E GG+ N +G+ +AL A N P YVAA F +Y ++ ++ Sbjct: 207 IDKVIIGADRIAE-GGVANKIGSLMVALAAKRFNVPFYVAAPMSTFDTENSIYDIEIEER 265 Query: 353 TPAHRPIDFGVPI-PAGVEVETSARDYTP 270 PA G I P E A D P Sbjct: 266 DPAEVLYYGGCRIAPQDTEAINPAFDIVP 294
>MTNA_LEPIN (Q8F2A8) Probable methylthioribose-1-phosphate isomerase (EC| 5.3.1.23) (MTR-1-P isomerase) Length = 364 Score = 42.0 bits (97), Expect = 0.001 Identities = 19/42 (45%), Positives = 26/42 (61%) Frame = -2 Query: 527 EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPLYVAA 402 ++D V VGAD + +G N +GTY +A+VA P YVAA Sbjct: 233 KIDAVIVGADRIASNGDTANKIGTYPLAIVAKHHGVPFYVAA 274
>MTNA_LEPIC (Q72T46) Probable methylthioribose-1-phosphate isomerase (EC| 5.3.1.23) (MTR-1-P isomerase) Length = 364 Score = 42.0 bits (97), Expect = 0.001 Identities = 19/42 (45%), Positives = 26/42 (61%) Frame = -2 Query: 527 EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPLYVAA 402 ++D V VGAD + +G N +GTY +A+VA P YVAA Sbjct: 233 KIDAVIVGADRIASNGDTANKIGTYPLAIVAKHHGVPFYVAA 274
>EI2BB_FUGRU (Q90511) Translation initiation factor eIF-2B beta subunit (eIF-2B| GDP-GTP exchange factor) (S20I15) Length = 355 Score = 42.0 bits (97), Expect = 0.001 Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 5/109 (4%) Frame = -2 Query: 524 VDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPLYVAAESYKFARLYPLDQ----KD 357 V+ V +G V+ +GG+ + GT+ +AL A + PL V A +K + +P ++ K Sbjct: 233 VNKVIIGTQTVLANGGLRAVNGTHTLALAAKHHSTPLIVCAPMFKLSPQFPNEEDTFHKF 292 Query: 356 MTPAHRPIDFGV-PIPAGVEVETSARDYTPPQYXXXXXXXXXXXTPSVV 213 ++P H + F I + V V DY PP+ PS + Sbjct: 293 VSP-HEVLPFTEGEILSKVNVHCPVFDYVPPELITLFISNIGGHAPSYI 340
>EI2BD_YEAST (P12754) Translation initiation factor eIF-2B delta subunit (eIF-2B| GDP-GTP exchange factor) (Guanine nucleotide exchange factor subunit GCD2) (GCD complex subunit GCD2) Length = 651 Score = 42.0 bits (97), Expect = 0.001 Identities = 22/66 (33%), Positives = 34/66 (51%) Frame = -2 Query: 527 EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPLYVAAESYKFARLYPLDQKDMTP 348 +VD VF+GA ++ +G + + GT +A+ A N P+ V ES KF++ LD Sbjct: 466 DVDYVFLGAHSILSNGFLYSRAGTAMLAMSAKRRNIPVLVCCESLKFSQRVQLDSVTFNE 525 Query: 347 AHRPID 330 P D Sbjct: 526 LADPND 531
>EI2B1_ARCFU (O29877) Putative translation initiation factor eIF-2B subunit 1| (eIF-2B GDP-GTP exchange factor) Length = 339 Score = 41.6 bits (96), Expect = 0.001 Identities = 32/91 (35%), Positives = 43/91 (47%), Gaps = 6/91 (6%) Frame = -2 Query: 524 VDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPLYVAAESYKFARLYPLDQKDMTPA 345 VD V VGAD +V + N +GTY +++VA N P YVAA F + KD+ Sbjct: 224 VDKVIVGADRIVRDA-VFNKIGTYTVSVVAKHHNIPFYVAAPKATFD--WERTAKDVVIE 280 Query: 344 HRPIDFGV------PIPAGVEVETSARDYTP 270 RP + + P V+V A D TP Sbjct: 281 ERPREELIFCGKRQIAPLNVKVYNPAFDPTP 311
>EI2B1_PYRHO (O58433) Putative translation initiation factor eIF-2B subunit 1| (eIF-2B GDP-GTP exchange factor) Length = 364 Score = 41.2 bits (95), Expect = 0.002 Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 6/94 (6%) Frame = -2 Query: 524 VDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPLYVAAE------SYKFARLYPLDQ 363 VD + VGAD +V +G N +GTY +A++A P + A K + P+++ Sbjct: 239 VDAIIVGADRIVANGDFANKIGTYMLAVLAREHGIPFFAVAPLSSIDMELKSGKDIPIEE 298 Query: 362 KDMTPAHRPIDFGVPIPAGVEVETSARDYTPPQY 261 + +P G I V V A D TP +Y Sbjct: 299 R--SPEEVLTCGGCRIAPDVPVYNPAFDVTPHKY 330
>EI2B1_PYRFU (Q8U178) Putative translation initiation factor eIF-2B subunit 1| (eIF-2B GDP-GTP exchange factor) Length = 356 Score = 41.2 bits (95), Expect = 0.002 Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 6/95 (6%) Frame = -2 Query: 527 EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPLYVAAE------SYKFARLYPLD 366 +VD + VGAD +V +G N +GTY +A++A P + A S + P++ Sbjct: 238 KVDAIIVGADRIVANGDFANKIGTYMLAVLAKEHGIPFFTVAPLSSIDMSLSSGKEIPIE 297 Query: 365 QKDMTPAHRPIDFGVPIPAGVEVETSARDYTPPQY 261 ++ +P G I V V A D TP +Y Sbjct: 298 ER--SPEEVLTCGGCRIAPDVPVYNPAFDVTPHKY 330
>MTNA_THEMA (Q9X013) Probable methylthioribose-1-phosphate isomerase (EC| 5.3.1.23) (MTR-1-P isomerase) Length = 343 Score = 40.8 bits (94), Expect = 0.002 Identities = 19/41 (46%), Positives = 26/41 (63%) Frame = -2 Query: 524 VDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPLYVAA 402 +D V VGAD + +G N +GTY +A++A N P YVAA Sbjct: 226 IDAVVVGADRIALNGDTANKIGTYSLAVLAKRNNIPFYVAA 266
>EI2B1_AERPE (Q9YE84) Putative translation initiation factor eIF-2B subunit 1| (eIF-2B GDP-GTP exchange factor) Length = 370 Score = 39.7 bits (91), Expect = 0.005 Identities = 19/46 (41%), Positives = 25/46 (54%) Frame = -2 Query: 524 VDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPLYVAAESYKF 387 V VGAD +V +G N +GTY +A+ A P YVAA + F Sbjct: 250 VSKAIVGADRIVSTGHTANKIGTYMVAMAASRHGVPFYVAAPASTF 295
>MTNA_PSEPK (Q88M09) Probable methylthioribose-1-phosphate isomerase (EC| 5.3.1.23) (MTR-1-P isomerase) Length = 358 Score = 39.7 bits (91), Expect = 0.005 Identities = 30/92 (32%), Positives = 42/92 (45%), Gaps = 7/92 (7%) Frame = -2 Query: 524 VDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPLYVAAESYKF------ARLYPLDQ 363 + V VGAD + +G + +GTYQ+A+ A V A S PL++ Sbjct: 238 ITWVVVGADCIAANGDMAGKIGTYQLAVSAMHHGVRFMVVAPSTSIDLNLATGEDIPLEE 297 Query: 362 KDMTPAHRPIDF-GVPIPAGVEVETSARDYTP 270 +D A +DF G P+ GVEV D TP Sbjct: 298 RD---ADEWLDFGGTPVSPGVEVFNPVFDVTP 326
>MTNA_XYLFT (Q87A92) Probable methylthioribose-1-phosphate isomerase (EC| 5.3.1.23) (MTR-1-P isomerase) Length = 354 Score = 33.5 bits (75), Expect = 0.37 Identities = 16/44 (36%), Positives = 23/44 (52%) Frame = -2 Query: 527 EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPLYVAAES 396 +V V VGAD + +G N +GTYQ+A+ A V A + Sbjct: 236 QVQWVIVGADRICANGDTANKIGTYQLAITARHHGVKFMVVASA 279
>MTNA_XYLFA (Q9PAG5) Probable methylthioribose-1-phosphate isomerase (EC| 5.3.1.23) (MTR-1-P isomerase) Length = 354 Score = 33.5 bits (75), Expect = 0.37 Identities = 16/44 (36%), Positives = 23/44 (52%) Frame = -2 Query: 527 EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPLYVAAES 396 +V V VGAD + +G N +GTYQ+A+ A V A + Sbjct: 236 QVQWVIVGADRICANGDAANKIGTYQLAITARHHGVKFMVVASA 279
>YQJQ_CAEEL (Q93169) Hypothetical protein C01G10.9 in chromosome V| Length = 366 Score = 33.5 bits (75), Expect = 0.37 Identities = 15/39 (38%), Positives = 21/39 (53%) Frame = -2 Query: 527 EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPLY 411 +VD V GAD V +G N +GTY +A++ N Y Sbjct: 251 QVDCVLTGADNVARNGDTANKIGTYMLAVLCKHHNINFY 289
>MTNA_PSESM (Q885T7) Probable methylthioribose-1-phosphate isomerase (EC| 5.3.1.23) (MTR-1-P isomerase) Length = 358 Score = 33.1 bits (74), Expect = 0.48 Identities = 16/43 (37%), Positives = 23/43 (53%) Frame = -2 Query: 524 VDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPLYVAAES 396 + V VGAD + +G + N +GTYQ+A+ A V A S Sbjct: 238 ITWVIVGADRITANGDVANKIGTYQLAVAAMHHGVRFMVVAPS 280
>POL_CAEVC (P33459) Pol polyprotein [Contains: Protease (Retropepsin) (EC| 3.4.23.-); Reverse transcriptase/ribonuclease H (EC 2.7.7.49) (EC 3.1.26.4) (RT); Integrase (IN)] Length = 1109 Score = 32.7 bits (73), Expect = 0.63 Identities = 18/50 (36%), Positives = 28/50 (56%) Frame = -2 Query: 509 VGADGVVESGGIINMMGTYQIALVAHSMNKPLYVAAESYKFARLYPLDQK 360 + A GV GGII+ QI ++ ++ NK V + KFA+L +D+K Sbjct: 754 MAAKGVFTQGGIIDSGYQGQIQVIMYNSNKIAVVIPQGRKFAQLILMDKK 803
>YP18_YEAST (Q06489) Hypothetical 45.0 kDa protein in PIS1-CLB2 intergenic| region Length = 411 Score = 32.7 bits (73), Expect = 0.63 Identities = 14/41 (34%), Positives = 22/41 (53%) Frame = -2 Query: 524 VDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPLYVAA 402 + FVGAD +V +G N +GT Q+A++ +V A Sbjct: 272 IKAAFVGADRIVRNGDTANKIGTLQLAVICKQFGIKFFVVA 312
>DUSC_PSEPK (Q88LF2) tRNA-dihydrouridine synthase C (EC 1.-.-.-)| Length = 323 Score = 32.0 bits (71), Expect = 1.1 Identities = 18/54 (33%), Positives = 29/54 (53%) Frame = +3 Query: 201 ELIAHNGWCQNTKVSQKKCEVLGRSVVSCRCLNFHTSRYRDSKIYRPMSWCHVL 362 E+ + W + +VS + +LGR +VS L + RD + Y+PMSW +L Sbjct: 201 EIWTVDDWRRCREVSGAEDIMLGRGLVSRPDLGLQIAAARDGRDYQPMSWHDLL 254
>MTNA_PSEAE (Q9HZ65) Probable methylthioribose-1-phosphate isomerase (EC| 5.3.1.23) (MTR-1-P isomerase) Length = 358 Score = 32.0 bits (71), Expect = 1.1 Identities = 16/43 (37%), Positives = 23/43 (53%) Frame = -2 Query: 524 VDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPLYVAAES 396 + V VGAD + +G + N +GTYQ+A+ A V A S Sbjct: 238 ITWVIVGADRITANGDVANKIGTYQLAVNAMHHGVRFMVVAPS 280
>RNP1_SCHPO (Q9P7W9) Probable ribonuclease P protein subunit 1 (EC 3.1.26.5)| Length = 217 Score = 31.6 bits (70), Expect = 1.4 Identities = 20/55 (36%), Positives = 29/55 (52%) Frame = +2 Query: 92 KITTYSERQAKPRFNHSTLHLIWTTYILAVIIGTVG*AHRSQRMVSEHQGQSKEV 256 KI YS+ F H LH +W +YIL VI G G + ++ +E+QG +V Sbjct: 89 KIADYSQ------FKH--LHSMWCSYILEVIAGCTGESLMAKLAKAEYQGAYMQV 135
>EI2BB_YEAST (P32502) Translation initiation factor eIF-2B beta subunit (eIF-2B| GDP-GTP exchange factor) (Guanine nucleotide exchange factor subunit GCD7) (GCD complex subunit GCD7) Length = 381 Score = 31.6 bits (70), Expect = 1.4 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 1/54 (1%) Frame = -2 Query: 524 VDMVFVGADGVVESGGIINM-MGTYQIALVAHSMNKPLYVAAESYKFARLYPLD 366 V V +G V +GG I+ G + A P++ A YK + LYP D Sbjct: 255 VGKVIIGTKAVFVNGGTISSNSGVSSVCECAREFRTPVFAVAGLYKLSPLYPFD 308
>SRLR_ECOLI (P15082) Glucitol operon repressor| Length = 257 Score = 28.9 bits (63), Expect = 9.1 Identities = 13/50 (26%), Positives = 25/50 (50%) Frame = -2 Query: 521 DMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPLYVAAESYKFARLYP 372 D +F+G DG+ + G+ Y ++ + + + + A+S KF R P Sbjct: 167 DKLFMGTDGIDLNAGVTTFNEVYTVSKAMCNAAREVILMADSSKFGRKSP 216
>ZDHC8_MOUSE (Q5Y5T5) Probable palmitoyltransferase ZDHHC8 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 8) (DHHC-8) Length = 762 Score = 28.9 bits (63), Expect = 9.1 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = -2 Query: 371 LDQKDMTPAHRPIDFGVPIPAGVEVETSARDYTPPQ 264 LDQ D +P+D G P+P +E T RD P+ Sbjct: 301 LDQLD----EKPLDLGPPLPPKIEAGTFGRDLKTPR 332 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,670,167 Number of Sequences: 219361 Number of extensions: 1487674 Number of successful extensions: 4272 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 4152 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4261 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4027872870 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
