Clone Name | rbart35f05 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK071243.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087F24, full insert sequence Length = 1121 Score = 396 bits (200), Expect = e-107 Identities = 314/352 (89%) Strand = Plus / Minus Query: 177 cagtgatcataggtacagttggatgagctcatcgctcacaacggatggtgtcagaacacc 236 ||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 907 cagtgatcataggtatagttggataagctcatcgctcacaacagatggtgtcagaacacc 848 Query: 237 aaggtcagtcaaaagaagtgtgaggtactggggaggagtgtagtctcttgccgatgtctc 296 || ||||||| ||| || || || ||||||||||||||||||||||| || || ||||| Sbjct: 847 gagatcagtcagaagcagcgtaagatactggggaggagtgtagtctctcgctgaagtctc 788 Query: 297 aacttccacaccagcaggtatagggactccaaaatctatcggccgatgagctggtgtcat 356 ||| ||||||||||| || || || ||||||||||| || || || |||||||||||||| Sbjct: 787 aacctccacaccagccggaattggaactccaaaatcaatgggtcggtgagctggtgtcat 728 Query: 357 gtccttctggtccaggggatatagacgagcaaacttataactttcagcagccacatatag 416 |||||||||||||| |||||||| || |||||||| |||||||||||||||||||| | Sbjct: 727 gtccttctggtccaacggatataggcgtgcaaacttgtaactttcagcagccacataaac 668 Query: 417 aggtttattcatgctatgagctacaagagctatctgataagtccccatcatattaataat 476 |||||| ||||| || ||||| || ||||||||||||||||| ||||||||||| || || Sbjct: 667 aggtttgttcatactgtgagcgacgagagctatctgataagtgcccatcatattgattat 608 Query: 477 tcctccactttcaacaaccccatcagcaccaacaaataccatgtcaacttca 528 |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 607 tcctccactttcaacaaccccatcagcaccaacaaacaccatgtcaacttca 556
>dbj|AK068908.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003C02, full insert sequence Length = 1373 Score = 396 bits (200), Expect = e-107 Identities = 314/352 (89%) Strand = Plus / Minus Query: 177 cagtgatcataggtacagttggatgagctcatcgctcacaacggatggtgtcagaacacc 236 ||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 1181 cagtgatcataggtatagttggataagctcatcgctcacaacagatggtgtcagaacacc 1122 Query: 237 aaggtcagtcaaaagaagtgtgaggtactggggaggagtgtagtctcttgccgatgtctc 296 || ||||||| ||| || || || ||||||||||||||||||||||| || || ||||| Sbjct: 1121 gagatcagtcagaagcagcgtaagatactggggaggagtgtagtctctcgctgaagtctc 1062 Query: 297 aacttccacaccagcaggtatagggactccaaaatctatcggccgatgagctggtgtcat 356 ||| ||||||||||| || || || ||||||||||| || || || |||||||||||||| Sbjct: 1061 aacctccacaccagccggaattggaactccaaaatcaatgggtcggtgagctggtgtcat 1002 Query: 357 gtccttctggtccaggggatatagacgagcaaacttataactttcagcagccacatatag 416 |||||||||||||| |||||||| || |||||||| |||||||||||||||||||| | Sbjct: 1001 gtccttctggtccaacggatataggcgtgcaaacttgtaactttcagcagccacataaac 942 Query: 417 aggtttattcatgctatgagctacaagagctatctgataagtccccatcatattaataat 476 |||||| ||||| || ||||| || ||||||||||||||||| ||||||||||| || || Sbjct: 941 aggtttgttcatactgtgagcgacgagagctatctgataagtgcccatcatattgattat 882 Query: 477 tcctccactttcaacaaccccatcagcaccaacaaataccatgtcaacttca 528 |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 881 tcctccactttcaacaaccccatcagcaccaacaaacaccatgtcaacttca 830
>gb|BT018602.1| Zea mays clone EL01N0449E02.d mRNA sequence Length = 1546 Score = 317 bits (160), Expect = 2e-83 Identities = 301/348 (86%) Strand = Plus / Plus Query: 181 gatcataggtacagttggatgagctcatcgctcacaacggatggtgtcagaacaccaagg 240 |||||||| |||||||||||||||||||| || ||||| || || ||||||||||||||| Sbjct: 167 gatcatagatacagttggatgagctcatcactaacaacagacggggtcagaacaccaagg 226 Query: 241 tcagtcaaaagaagtgtgaggtactggggaggagtgtagtctcttgccgatgtctcaact 300 || |||| || |||||||| || |||||||| |||||||||||||| |||||||| ||| Sbjct: 227 tcggtcaggaggagtgtgagatattggggaggggtgtagtctcttgcagatgtctccact 286 Query: 301 tccacaccagcaggtatagggactccaaaatctatcggccgatgagctggtgtcatgtcc 360 ||||||||| |||||||| |||||||||||||| || || ||||||| ||||||||| Sbjct: 287 tccacaccaatgggtataggtactccaaaatctattggtcggggagctggcgtcatgtcc 346 Query: 361 ttctggtccaggggatatagacgagcaaacttataactttcagcagccacatatagaggt 420 || || |||| ||||||||| ||||||||||| || |||||||| |||||||| | |||| Sbjct: 347 ttttgatccaagggatatagccgagcaaacttgtagctttcagctgccacataaacaggt 406 Query: 421 ttattcatgctatgagctacaagagctatctgataagtccccatcatattaataattcct 480 || | ||| ||||||| ||||||||||||||||||| ||||||||||| || |||||| Sbjct: 407 ttgtccatagtatgagccacaagagctatctgataagggcccatcatattgattattcct 466 Query: 481 ccactttcaacaaccccatcagcaccaacaaataccatgtcaacttca 528 || || |||||||||||||||| |||||||| ||||||||||||||| Sbjct: 467 ccgctctcaacaaccccatcagggccaacaaaaaccatgtcaacttca 514
>gb|AY104820.1| Zea mays PCO149896 mRNA sequence Length = 479 Score = 240 bits (121), Expect = 4e-60 Identities = 231/266 (86%), Gaps = 2/266 (0%) Strand = Plus / Minus Query: 265 tggggaggagtgtagtctc-ttgcc-gatgtctcaacttccacaccagcaggtataggga 322 |||||||| ||||||||| ||||| |||||||| |||||||||||| ||| |||| Sbjct: 461 tggggaggtntgtagtctccttgccagatgtctccacttccacaccaatgggtntaggtn 402 Query: 323 ctccaaaatctatcggccgatgagctggtgtcatgtccttctggtccaggggatatagac 382 ||||||||||||| || || |||||||| |||||||||||||| |||| ||||||||| | Sbjct: 401 ctccaaaatctattggtcggtgagctggcgtcatgtccttctgatccaagggatatagcc 342 Query: 383 gagcaaacttataactttcagcagccacatatagaggtttattcatgctatgagctacaa 442 |||||||||| || |||||||| |||||||| | |||||| | ||| ||||||| |||| Sbjct: 341 gagcaaacttgtagctttcagctgccacataaacaggtttgtccatagtatgagccacaa 282 Query: 443 gagctatctgataagtccccatcatattaataattcctccactttcaacaaccccatcag 502 |||||||||||||||| ||||||||||| || |||||||| || |||||||||||||||| Sbjct: 281 gagctatctgataagtgcccatcatattgattattcctccgctctcaacaaccccatcag 222 Query: 503 caccaacaaataccatgtcaacttca 528 | |||||||| ||||||||||||||| Sbjct: 221 cgccaacaaaaaccatgtcaacttca 196
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 220 bits (111), Expect = 4e-54 Identities = 189/215 (87%) Strand = Plus / Plus Query: 177 cagtgatcataggtacagttggatgagctcatcgctcacaacggatggtgtcagaacacc 236 ||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 18920505 cagtgatcataggtatagttggataagctcatcgctcacaacagatggtgtcagaacacc 18920564 Query: 237 aaggtcagtcaaaagaagtgtgaggtactggggaggagtgtagtctcttgccgatgtctc 296 || ||||||| ||| || || || ||||||||||||||||||||||| || || ||||| Sbjct: 18920565 gagatcagtcagaagcagcgtaagatactggggaggagtgtagtctctcgctgaagtctc 18920624 Query: 297 aacttccacaccagcaggtatagggactccaaaatctatcggccgatgagctggtgtcat 356 ||| ||||||||||| || || || ||||||||||| || || || |||||||||||||| Sbjct: 18920625 aacctccacaccagccggaattggaactccaaaatcaatgggtcggtgagctggtgtcat 18920684 Query: 357 gtccttctggtccaggggatatagacgagcaaact 391 |||||||||||||| |||||||| || ||||||| Sbjct: 18920685 gtccttctggtccaacggatataggcgtgcaaact 18920719 Score = 180 bits (91), Expect = 3e-42 Identities = 124/135 (91%) Strand = Plus / Plus Query: 394 taactttcagcagccacatatagaggtttattcatgctatgagctacaagagctatctga 453 |||||||||||||||||||| | |||||| ||||| || ||||| || |||||||||||| Sbjct: 18920972 taactttcagcagccacataaacaggtttgttcatactgtgagcgacgagagctatctga 18921031 Query: 454 taagtccccatcatattaataattcctccactttcaacaaccccatcagcaccaacaaat 513 ||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 18921032 taagtgcccatcatattgattattcctccactttcaacaaccccatcagcaccaacaaac 18921091 Query: 514 accatgtcaacttca 528 ||||||||||||||| Sbjct: 18921092 accatgtcaacttca 18921106
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 220 bits (111), Expect = 4e-54 Identities = 189/215 (87%) Strand = Plus / Plus Query: 177 cagtgatcataggtacagttggatgagctcatcgctcacaacggatggtgtcagaacacc 236 ||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 18846732 cagtgatcataggtatagttggataagctcatcgctcacaacagatggtgtcagaacacc 18846791 Query: 237 aaggtcagtcaaaagaagtgtgaggtactggggaggagtgtagtctcttgccgatgtctc 296 || ||||||| ||| || || || ||||||||||||||||||||||| || || ||||| Sbjct: 18846792 gagatcagtcagaagcagcgtaagatactggggaggagtgtagtctctcgctgaagtctc 18846851 Query: 297 aacttccacaccagcaggtatagggactccaaaatctatcggccgatgagctggtgtcat 356 ||| ||||||||||| || || || ||||||||||| || || || |||||||||||||| Sbjct: 18846852 aacctccacaccagccggaattggaactccaaaatcaatgggtcggtgagctggtgtcat 18846911 Query: 357 gtccttctggtccaggggatatagacgagcaaact 391 |||||||||||||| |||||||| || ||||||| Sbjct: 18846912 gtccttctggtccaacggatataggcgtgcaaact 18846946 Score = 180 bits (91), Expect = 3e-42 Identities = 124/135 (91%) Strand = Plus / Plus Query: 394 taactttcagcagccacatatagaggtttattcatgctatgagctacaagagctatctga 453 |||||||||||||||||||| | |||||| ||||| || ||||| || |||||||||||| Sbjct: 18847199 taactttcagcagccacataaacaggtttgttcatactgtgagcgacgagagctatctga 18847258 Query: 454 taagtccccatcatattaataattcctccactttcaacaaccccatcagcaccaacaaat 513 ||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 18847259 taagtgcccatcatattgattattcctccactttcaacaaccccatcagcaccaacaaac 18847318 Query: 514 accatgtcaacttca 528 ||||||||||||||| Sbjct: 18847319 accatgtcaacttca 18847333
>emb|AL831808.4|CNS08CAL Oryza sativa chromosome 12, . BAC OSJNBa0028H02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 153064 Score = 220 bits (111), Expect = 4e-54 Identities = 189/215 (87%) Strand = Plus / Minus Query: 177 cagtgatcataggtacagttggatgagctcatcgctcacaacggatggtgtcagaacacc 236 ||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 49874 cagtgatcataggtatagttggataagctcatcgctcacaacagatggtgtcagaacacc 49815 Query: 237 aaggtcagtcaaaagaagtgtgaggtactggggaggagtgtagtctcttgccgatgtctc 296 || ||||||| ||| || || || ||||||||||||||||||||||| || || ||||| Sbjct: 49814 gagatcagtcagaagcagcgtaagatactggggaggagtgtagtctctcgctgaagtctc 49755 Query: 297 aacttccacaccagcaggtatagggactccaaaatctatcggccgatgagctggtgtcat 356 ||| ||||||||||| || || || ||||||||||| || || || |||||||||||||| Sbjct: 49754 aacctccacaccagccggaattggaactccaaaatcaatgggtcggtgagctggtgtcat 49695 Query: 357 gtccttctggtccaggggatatagacgagcaaact 391 |||||||||||||| |||||||| || ||||||| Sbjct: 49694 gtccttctggtccaacggatataggcgtgcaaact 49660 Score = 180 bits (91), Expect = 3e-42 Identities = 124/135 (91%) Strand = Plus / Minus Query: 394 taactttcagcagccacatatagaggtttattcatgctatgagctacaagagctatctga 453 |||||||||||||||||||| | |||||| ||||| || ||||| || |||||||||||| Sbjct: 49407 taactttcagcagccacataaacaggtttgttcatactgtgagcgacgagagctatctga 49348 Query: 454 taagtccccatcatattaataattcctccactttcaacaaccccatcagcaccaacaaat 513 ||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 49347 taagtgcccatcatattgattattcctccactttcaacaaccccatcagcaccaacaaac 49288 Query: 514 accatgtcaacttca 528 ||||||||||||||| Sbjct: 49287 accatgtcaacttca 49273
>emb|BX255875.3|CNS09S4W Oryza sativa chromosome 12, . BAC OSJNBa0018L16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151203 Score = 220 bits (111), Expect = 4e-54 Identities = 189/215 (87%) Strand = Plus / Plus Query: 177 cagtgatcataggtacagttggatgagctcatcgctcacaacggatggtgtcagaacacc 236 ||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 16622 cagtgatcataggtatagttggataagctcatcgctcacaacagatggtgtcagaacacc 16681 Query: 237 aaggtcagtcaaaagaagtgtgaggtactggggaggagtgtagtctcttgccgatgtctc 296 || ||||||| ||| || || || ||||||||||||||||||||||| || || ||||| Sbjct: 16682 gagatcagtcagaagcagcgtaagatactggggaggagtgtagtctctcgctgaagtctc 16741 Query: 297 aacttccacaccagcaggtatagggactccaaaatctatcggccgatgagctggtgtcat 356 ||| ||||||||||| || || || ||||||||||| || || || |||||||||||||| Sbjct: 16742 aacctccacaccagccggaattggaactccaaaatcaatgggtcggtgagctggtgtcat 16801 Query: 357 gtccttctggtccaggggatatagacgagcaaact 391 |||||||||||||| |||||||| || ||||||| Sbjct: 16802 gtccttctggtccaacggatataggcgtgcaaact 16836 Score = 180 bits (91), Expect = 3e-42 Identities = 124/135 (91%) Strand = Plus / Plus Query: 394 taactttcagcagccacatatagaggtttattcatgctatgagctacaagagctatctga 453 |||||||||||||||||||| | |||||| ||||| || ||||| || |||||||||||| Sbjct: 17089 taactttcagcagccacataaacaggtttgttcatactgtgagcgacgagagctatctga 17148 Query: 454 taagtccccatcatattaataattcctccactttcaacaaccccatcagcaccaacaaat 513 ||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 17149 taagtgcccatcatattgattattcctccactttcaacaaccccatcagcaccaacaaac 17208 Query: 514 accatgtcaacttca 528 ||||||||||||||| Sbjct: 17209 accatgtcaacttca 17223
>emb|AJ871904.1| Coffea canephora subsp. canephora microsatellite DNA, clone 82L06 Length = 1214 Score = 87.7 bits (44), Expect = 3e-14 Identities = 110/132 (83%) Strand = Plus / Minus Query: 397 ctttcagcagccacatatagaggtttattcatgctatgagctacaagagctatctgataa 456 ||||||||||| ||||| | |||||| ||||||| | ||| || | || || || || Sbjct: 178 ctttcagcagcaacataaactggtttactcatgctcttagcaaccaatgcaatttggtat 119 Query: 457 gtccccatcatattaataattcctccactttcaacaaccccatcagcaccaacaaatacc 516 ||||||||||| ||||| ||||||||||| |||||||| ||||| || |||||||| ||| Sbjct: 118 gtccccatcatgttaattattcctccactctcaacaactccatctgctccaacaaaaacc 59 Query: 517 atgtcaacttca 528 |||||||||||| Sbjct: 58 atgtcaacttca 47
>ref|NM_104268.3| Arabidopsis thaliana GTP binding / translation initiation factor AT1G53900 mRNA, complete cds Length = 1899 Score = 79.8 bits (40), Expect = 8e-12 Identities = 118/144 (81%) Strand = Plus / Minus Query: 385 gcaaacttataactttcagcagccacatatagaggtttattcatgctatgagctacaaga 444 |||||||| ||||| || ||||| ||||| | ||||||||||| || || || || || Sbjct: 1541 gcaaacttgtaactctctgcagctacatagactggtttattcatactctgtgcgactagg 1482 Query: 445 gctatctgataagtccccatcatattaataattcctccactttcaacaaccccatcagca 504 || || || ||||| |||||||| ||||| || || ||||||||||| || |||||||| Sbjct: 1481 gcgatttggtaagttcccatcatgttaattatcccgccactttcaactactccatcagct 1422 Query: 505 ccaacaaataccatgtcaacttca 528 |||||||| |||||||| |||||| Sbjct: 1421 ccaacaaacaccatgtctacttca 1398 Score = 48.1 bits (24), Expect = 0.029 Identities = 57/68 (83%) Strand = Plus / Minus Query: 220 gatggtgtcagaacaccaaggtcagtcaaaagaagtgtgaggtactggggaggagtgtag 279 ||||| || ||||||||||| ||||| || || || || | |||||| |||||||||||| Sbjct: 1706 gatggagtgagaacaccaagatcagtgaagagtagagtcaagtactgaggaggagtgtag 1647 Query: 280 tctcttgc 287 || ||||| Sbjct: 1646 tcccttgc 1639
>ref|NM_104265.2| Arabidopsis thaliana GTP binding / translation initiation factor AT1G53880 mRNA, complete cds Length = 1948 Score = 79.8 bits (40), Expect = 8e-12 Identities = 118/144 (81%) Strand = Plus / Minus Query: 385 gcaaacttataactttcagcagccacatatagaggtttattcatgctatgagctacaaga 444 |||||||| ||||| || ||||| ||||| | ||||||||||| || || || || || Sbjct: 1541 gcaaacttgtaactctctgcagctacatagactggtttattcatactctgtgcgactagg 1482 Query: 445 gctatctgataagtccccatcatattaataattcctccactttcaacaaccccatcagca 504 || || || ||||| |||||||| ||||| || || ||||||||||| || |||||||| Sbjct: 1481 gcgatttggtaagttcccatcatgttaattatcccgccactttcaactactccatcagct 1422 Query: 505 ccaacaaataccatgtcaacttca 528 |||||||| |||||||| |||||| Sbjct: 1421 ccaacaaacaccatgtctacttca 1398 Score = 48.1 bits (24), Expect = 0.029 Identities = 57/68 (83%) Strand = Plus / Minus Query: 220 gatggtgtcagaacaccaaggtcagtcaaaagaagtgtgaggtactggggaggagtgtag 279 ||||| || ||||||||||| ||||| || || || || | |||||| |||||||||||| Sbjct: 1706 gatggagtgagaacaccaagatcagtgaagagtagagtcaagtactgaggaggagtgtag 1647 Query: 280 tctcttgc 287 || ||||| Sbjct: 1646 tcccttgc 1639
>gb|AC009324.2| Arabidopsis thaliana chromosome I BAC T18A20 genomic sequence, complete sequence Length = 85413 Score = 69.9 bits (35), Expect = 8e-09 Identities = 65/75 (86%) Strand = Plus / Minus Query: 454 taagtccccatcatattaataattcctccactttcaacaaccccatcagcaccaacaaat 513 ||||| |||||||| ||||| || || ||||||||||| || |||||||| |||||||| Sbjct: 65709 taagttcccatcatgttaattatcccgccactttcaactactccatcagctccaacaaac 65650 Query: 514 accatgtcaacttca 528 |||||||| |||||| Sbjct: 65649 accatgtctacttca 65635 Score = 69.9 bits (35), Expect = 8e-09 Identities = 92/111 (82%) Strand = Plus / Minus Query: 418 ggtttattcatgctatgagctacaagagctatctgataagtccccatcatattaataatt 477 ||||||||||| || || || || || || || || ||||| |||||||| ||||| || Sbjct: 53180 ggtttattcatactctgtgcgactagggcgatttggtaagttcccatcatgttaattatc 53121 Query: 478 cctccactttcaacaaccccatcagcaccaacaaataccatgtcaacttca 528 || ||||||||||| || |||||||| |||||||| |||||||| |||||| Sbjct: 53120 ccgccactttcaactactccatcagctccaacaaacaccatgtctacttca 53070 Score = 48.1 bits (24), Expect = 0.029 Identities = 57/68 (83%) Strand = Plus / Minus Query: 220 gatggtgtcagaacaccaaggtcagtcaaaagaagtgtgaggtactggggaggagtgtag 279 ||||| || ||||||||||| ||||| || || || || | |||||| |||||||||||| Sbjct: 66034 gatggagtgagaacaccaagatcagtgaagagtagagtcaagtactgaggaggagtgtag 65975 Query: 280 tctcttgc 287 || ||||| Sbjct: 65974 tcccttgc 65967 Score = 48.1 bits (24), Expect = 0.029 Identities = 57/68 (83%) Strand = Plus / Minus Query: 220 gatggtgtcagaacaccaaggtcagtcaaaagaagtgtgaggtactggggaggagtgtag 279 ||||| || ||||||||||| ||||| || || || || | |||||| |||||||||||| Sbjct: 53469 gatggagtgagaacaccaagatcagtgaagagtagagtcaagtactgaggaggagtgtag 53410 Query: 280 tctcttgc 287 || ||||| Sbjct: 53409 tcccttgc 53402
>dbj|AP006736.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT45I15, TM1494, complete sequence Length = 114162 Score = 63.9 bits (32), Expect = 5e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 457 gtccccatcatattaataattcctccactttcaacaaccccatcagcaccaacaaatacc 516 ||||||||||| ||||| || || |||||||| ||||| ||||| ||||| ||||| ||| Sbjct: 45933 gtccccatcatgttaattatgcccccactttcgacaactccatctgcacccacaaaaacc 45992 Query: 517 atgtcaacttca 528 ||||| |||||| Sbjct: 45993 atgtccacttca 46004
>emb|CT033059.1| Platynereis dumerilii EST IB0AAA27BF12EM1 Length = 609 Score = 60.0 bits (30), Expect = 8e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 469 ttaataattcctccactttcaacaaccccatcagcaccaacaaataccatgtcaactt 526 |||||||||||||||||||| ||||| || ||||| || || || ||||||||||||| Sbjct: 229 ttaataattcctccactttccacaactccttcagctcccaccaaaaccatgtcaactt 172
>emb|CT033058.1| Platynereis dumerilii EST IB0AAA27BF12FM1 Length = 609 Score = 60.0 bits (30), Expect = 8e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 469 ttaataattcctccactttcaacaaccccatcagcaccaacaaataccatgtcaactt 526 |||||||||||||||||||| ||||| || ||||| || || || ||||||||||||| Sbjct: 381 ttaataattcctccactttccacaactccttcagctcccaccaaaaccatgtcaactt 438
>ref|NM_105893.2| Arabidopsis thaliana GTP binding / translation initiation factor AT1G72340 mRNA, complete cds Length = 1296 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 229 agaacaccaaggtcagtcaaaagaagtgtgaggtactggggaggagtgtagtctc 283 ||||||||||||||||| || || ||||| |||||||| || ||||| ||||||| Sbjct: 1120 agaacaccaaggtcagtgaagaggagtgttaggtactgaggcggagtatagtctc 1066
>gb|BT000134.1| Arabidopsis thaliana putative translation initiation factor EIF-2B alpha subunit (At1g72340) mRNA, complete cds Length = 1210 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 229 agaacaccaaggtcagtcaaaagaagtgtgaggtactggggaggagtgtagtctc 283 ||||||||||||||||| || || ||||| |||||||| || ||||| ||||||| Sbjct: 1103 agaacaccaaggtcagtgaagaggagtgttaggtactgaggcggagtatagtctc 1049
>gb|AY062581.1| Arabidopsis thaliana putative translation initiation factor EIF-2B alpha subunit (T10D10.19) mRNA, complete cds Length = 1238 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 229 agaacaccaaggtcagtcaaaagaagtgtgaggtactggggaggagtgtagtctc 283 ||||||||||||||||| || || ||||| |||||||| || ||||| ||||||| Sbjct: 1120 agaacaccaaggtcagtgaagaggagtgttaggtactgaggcggagtatagtctc 1066
>emb|BX813611.1|CNS0AE9X Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB27ZH07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 314 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 229 agaacaccaaggtcagtcaaaagaagtgtgaggtactggggaggagtgtagtctc 283 ||||||||||||||||| || || ||||| |||||||| || ||||| ||||||| Sbjct: 195 agaacaccaaggtcagtgaagaggagtgttaggtactgaggcggagtatagtctc 141
>gb|AC016529.7|AC016529 Arabidopsis thaliana chromosome 1 BAC T10D10 genomic sequence, complete sequence Length = 87039 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 229 agaacaccaaggtcagtcaaaagaagtgtgaggtactggggaggagtgtagtctc 283 ||||||||||||||||| || || ||||| |||||||| || ||||| ||||||| Sbjct: 74793 agaacaccaaggtcagtgaagaggagtgttaggtactgaggcggagtatagtctc 74847
>gb|AY086207.1| Arabidopsis thaliana clone 22437 mRNA, complete sequence Length = 1243 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 229 agaacaccaaggtcagtcaaaagaagtgtgaggtactggggaggagtgtagtctc 283 ||||||||||||||||| || || ||||| |||||||| || ||||| ||||||| Sbjct: 1120 agaacaccaaggtcagtgaagaggagtgttaggtactgaggcggagtatagtctc 1066
>ref|NM_001414.2| Homo sapiens eukaryotic translation initiation factor 2B, subunit 1 alpha, 26kDa (EIF2B1), mRNA Length = 1794 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 469 ttaataattcctccactttcaacaaccccatcagcaccaac 509 |||||||||||||| |||||||||| || ||||||||||| Sbjct: 766 ttaataattcctccgttttcaacaactccttcagcaccaac 726
>gb|BC103763.1| Homo sapiens eukaryotic translation initiation factor 2B, subunit 1 alpha, 26kDa, mRNA (cDNA clone MGC:117409 IMAGE:6148834), complete cds Length = 1743 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 469 ttaataattcctccactttcaacaaccccatcagcaccaac 509 |||||||||||||| |||||||||| || ||||||||||| Sbjct: 704 ttaataattcctccgttttcaacaactccttcagcaccaac 664
>gb|BC104189.1| Homo sapiens eukaryotic translation initiation factor 2B, subunit 1 alpha, 26kDa, mRNA (cDNA clone MGC:125869 IMAGE:40030991), complete cds Length = 1027 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 469 ttaataattcctccactttcaacaaccccatcagcaccaac 509 |||||||||||||| |||||||||| || ||||||||||| Sbjct: 633 ttaataattcctccgttttcaacaactccttcagcaccaac 593
>gb|BC104188.1| Homo sapiens eukaryotic translation initiation factor 2B, subunit 1 alpha, 26kDa, mRNA (cDNA clone MGC:125868 IMAGE:40030987), complete cds Length = 1027 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 469 ttaataattcctccactttcaacaaccccatcagcaccaac 509 |||||||||||||| |||||||||| || ||||||||||| Sbjct: 633 ttaataattcctccgttttcaacaactccttcagcaccaac 593
>gb|AC183502.5| Medicago truncatula clone mth2-75g17, complete sequence Length = 121928 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 457 gtccccatcatattaataattcctccactttcaacaaccccatcagcaccaacaaatacc 516 ||||||||||| ||||| || || || ||||||||||| ||||| ||||| |||| ||| Sbjct: 81424 gtccccatcatgttaattataccaccgctttcaacaactccatctgcacccacaagaacc 81483 Query: 517 atgtc 521 ||||| Sbjct: 81484 atgtc 81488 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 196 tggatgagctcatcgctcacaacggatggtgtcagaacacc 236 |||||||||||||| || ||||| ||||| || |||||||| Sbjct: 80779 tggatgagctcatcactaacaactgatggagtaagaacacc 80819
>emb|CR456831.1| Homo sapiens full open reading frame cDNA clone RZPDo834H0518D for gene EIF2B1, eukaryotic translation initiation factor 2B, subunit 1 alpha, 26kDa; complete cds, incl. stopcodon Length = 918 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 469 ttaataattcctccactttcaacaaccccatcagcaccaac 509 |||||||||||||| |||||||||| || ||||||||||| Sbjct: 623 ttaataattcctccgttttcaacaactccttcagcaccaac 583
>emb|CR858952.1| Pongo pygmaeus mRNA; cDNA DKFZp469L0133 (from clone DKFZp469L0133) Length = 1810 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 469 ttaataattcctccactttcaacaaccccatcagcaccaac 509 |||||||||||||| |||||||||| || ||||||||||| Sbjct: 751 ttaataattcctccgttttcaacaactccttcagcaccaac 711
>emb|CR624872.1| full-length cDNA clone CS0DE011YP09 of Placenta of Homo sapiens (human) Length = 1763 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 469 ttaataattcctccactttcaacaaccccatcagcaccaac 509 |||||||||||||| |||||||||| || ||||||||||| Sbjct: 757 ttaataattcctccgttttcaacaactccttcagcaccaac 717
>emb|CR624300.1| full-length cDNA clone CS0DJ012YC15 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1738 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 469 ttaataattcctccactttcaacaaccccatcagcaccaac 509 |||||||||||||| |||||||||| || ||||||||||| Sbjct: 743 ttaataattcctccgttttcaacaactccttcagcaccaac 703
>emb|CR613959.1| full-length cDNA clone CS0DJ003YD12 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1723 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 469 ttaataattcctccactttcaacaaccccatcagcaccaac 509 |||||||||||||| |||||||||| || ||||||||||| Sbjct: 723 ttaataattcctccgttttcaacaactccttcagcaccaac 683
>emb|CR609524.1| full-length cDNA clone CS0DJ006YN15 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1684 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 469 ttaataattcctccactttcaacaaccccatcagcaccaac 509 |||||||||||||| |||||||||| || ||||||||||| Sbjct: 706 ttaataattcctccgttttcaacaactccttcagcaccaac 666
>emb|CR612620.1| full-length cDNA clone CL0BA004ZE05 of Placenta of Homo sapiens (human) Length = 1750 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 469 ttaataattcctccactttcaacaaccccatcagcaccaac 509 |||||||||||||| |||||||||| || ||||||||||| Sbjct: 729 ttaataattcctccgttttcaacaactccttcagcaccaac 689
>emb|CR609781.1| full-length cDNA clone CS0DB006YA11 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1721 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 469 ttaataattcctccactttcaacaaccccatcagcaccaac 509 |||||||||||||| |||||||||| || ||||||||||| Sbjct: 728 ttaataattcctccgttttcaacaactccttcagcaccaac 688
>emb|CR605116.1| full-length cDNA clone CS0DF018YP06 of Fetal brain of Homo sapiens (human) Length = 1092 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 469 ttaataattcctccactttcaacaaccccatcagcaccaac 509 |||||||||||||| |||||||||| || ||||||||||| Sbjct: 73 ttaataattcctccgttttcaacaactccttcagcaccaac 33
>emb|CR606497.1| full-length cDNA clone CS0DC006YG22 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1693 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 469 ttaataattcctccactttcaacaaccccatcagcaccaac 509 |||||||||||||| |||||||||| || ||||||||||| Sbjct: 680 ttaataattcctccgttttcaacaactccttcagcaccaac 640
>emb|CR606092.1| full-length cDNA clone CS0DI031YL01 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1746 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 469 ttaataattcctccactttcaacaaccccatcagcaccaac 509 |||||||||||||| |||||||||| || ||||||||||| Sbjct: 757 ttaataattcctccgttttcaacaactccttcagcaccaac 717
>emb|CR602086.1| full-length cDNA clone CS0DK002YA01 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1676 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 469 ttaataattcctccactttcaacaaccccatcagcaccaac 509 |||||||||||||| |||||||||| || ||||||||||| Sbjct: 684 ttaataattcctccgttttcaacaactccttcagcaccaac 644
>emb|CR597921.1| full-length cDNA clone CS0DB002YE19 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1738 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 469 ttaataattcctccactttcaacaaccccatcagcaccaac 509 |||||||||||||| |||||||||| || ||||||||||| Sbjct: 729 ttaataattcctccgttttcaacaactccttcagcaccaac 689
>emb|CR596977.1| full-length cDNA clone CS0DB009YO20 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1693 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 469 ttaataattcctccactttcaacaaccccatcagcaccaac 509 |||||||||||||| |||||||||| || ||||||||||| Sbjct: 683 ttaataattcctccgttttcaacaactccttcagcaccaac 643
>gb|AC117503.8| Homo sapiens 12 BAC RP11-338K17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 218476 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 469 ttaataattcctccactttcaacaaccccatcagcaccaac 509 |||||||||||||| |||||||||| || ||||||||||| Sbjct: 201718 ttaataattcctccgttttcaacaactccttcagcaccaac 201678
>emb|X95648.1|HSEIF2BAS H.sapiens mRNA for eIF-2B alpha subunit Length = 1658 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 469 ttaataattcctccactttcaacaaccccatcagcaccaac 509 |||||||||||||| |||||||||| || ||||||||||| Sbjct: 633 ttaataattcctccgttttcaacaactccttcagcaccaac 593
>gb|BC003426.1| Mus musculus eukaryotic translation initiation factor 2B, subunit 1 (alpha), mRNA (cDNA clone MGC:6458 IMAGE:2615801), complete cds Length = 1515 Score = 48.1 bits (24), Expect = 0.029 Identities = 51/60 (85%) Strand = Plus / Minus Query: 183 tcataggtacagttggatgagctcatcgctcacaacggatggtgtcagaacaccaaggtc 242 |||||||||||| | ||||||||||||||| ||| | ||||| |||| ||||| ||||| Sbjct: 962 tcataggtacagcttgatgagctcatcgcttacagcagatggcgtcaacacacccaggtc 903
>ref|NM_145371.1| Mus musculus eukaryotic translation initiation factor 2B, subunit 1 (alpha) (Eif2b1), mRNA Length = 1515 Score = 48.1 bits (24), Expect = 0.029 Identities = 51/60 (85%) Strand = Plus / Minus Query: 183 tcataggtacagttggatgagctcatcgctcacaacggatggtgtcagaacaccaaggtc 242 |||||||||||| | ||||||||||||||| ||| | ||||| |||| ||||| ||||| Sbjct: 962 tcataggtacagcttgatgagctcatcgcttacagcagatggcgtcaacacacccaggtc 903
>gb|AC127313.3| Mus musculus BAC clone RP23-311A21 from 5, complete sequence Length = 195651 Score = 48.1 bits (24), Expect = 0.029 Identities = 51/60 (85%) Strand = Plus / Plus Query: 183 tcataggtacagttggatgagctcatcgctcacaacggatggtgtcagaacaccaaggtc 242 |||||||||||| | ||||||||||||||| ||| | ||||| |||| ||||| ||||| Sbjct: 147374 tcataggtacagcttgatgagctcatcgcttacagcagatggcgtcaacacacccaggtc 147433
>dbj|AK133695.1| Mus musculus adult male pituitary gland cDNA, RIKEN full-length enriched library, clone:5330440K01 product:eukaryotic translation initiation factor 2B, subunit 1 (alpha), full insert sequence Length = 1939 Score = 48.1 bits (24), Expect = 0.029 Identities = 51/60 (85%) Strand = Plus / Minus Query: 183 tcataggtacagttggatgagctcatcgctcacaacggatggtgtcagaacaccaaggtc 242 |||||||||||| | ||||||||||||||| ||| | ||||| |||| ||||| ||||| Sbjct: 963 tcataggtacagcttgatgagctcatcgcttacagcagatggcgtcaacacacccaggtc 904
>dbj|AK088066.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430003B07 product:TRANSLATION INITIATION FACTOR EIF-2B ALPHA SUBUNIT (EIF-2B GDP-GTP EXCHANGE FACTOR) homolog [Rattus norvegicus], full insert sequence Length = 1485 Score = 48.1 bits (24), Expect = 0.029 Identities = 51/60 (85%) Strand = Plus / Minus Query: 183 tcataggtacagttggatgagctcatcgctcacaacggatggtgtcagaacaccaaggtc 242 |||||||||||| | ||||||||||||||| ||| | ||||| |||| ||||| ||||| Sbjct: 958 tcataggtacagcttgatgagctcatcgcttacagcagatggcgtcaacacacccaggtc 899
>gb|BC081709.1| Rattus norvegicus eukaryotic translation initiation factor 2B, subunit 1 alpha, mRNA (cDNA clone MGC:93113 IMAGE:7135576), complete cds Length = 1502 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Minus Query: 187 aggtacagttggatgagctcatcgctcacaacggatggtgtca 229 |||||||| | ||||||||| ||||| ||| |||||||||||| Sbjct: 959 aggtacagcttgatgagctcgtcgcttacagcggatggtgtca 917
>gb|DQ213426.1| Taeniopygia guttata clone 0065P0027C05 eukaryotic translation initiation factor 2B subunit 1 alpha-like mRNA, complete sequence Length = 1173 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Minus Query: 472 ataattcctccactttcaacaaccccatcagcaccaacaaataccatgtcaactt 526 ||||| |||||||||||||| || || ||||||||||| || |||| ||| |||| Sbjct: 639 ataatgcctccactttcaactacaccttcagcaccaactaacaccaggtccactt 585
>gb|AC149290.1| Solanum demissum chromosome 5 clone PGEC093P17 map MAP_LOC, complete sequence Length = 200238 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 379 agacgagcaaacttataactttcagcagccacata 413 ||||||| |||||| ||||||||||| |||||||| Sbjct: 88546 agacgagtaaacttgtaactttcagctgccacata 88512
>ref|NM_172029.1| Rattus norvegicus eukaryotic translation initiation factor 2B, subunit 1 alpha (Eif2b1), mRNA Length = 1494 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Minus Query: 187 aggtacagttggatgagctcatcgctcacaacggatggtgtca 229 |||||||| | ||||||||| ||||| ||| |||||||||||| Sbjct: 978 aggtacagcttgatgagctcgtcgcttacagcggatggtgtca 936
>gb|U05821.1|RNU05821 Rattus norvegicus translation initiation factor eIF-2B alpha-subunit (eIF-2a) mRNA, complete cds Length = 1494 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Minus Query: 187 aggtacagttggatgagctcatcgctcacaacggatggtgtca 229 |||||||| | ||||||||| ||||| ||| |||||||||||| Sbjct: 978 aggtacagcttgatgagctcgtcgcttacagcggatggtgtca 936
>gb|L41679.1|RATEIF2G Rattus norvegicus GTP-exchange protein (eIF-2Balpha) gene, exons Length = 13872 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Minus Query: 187 aggtacagttggatgagctcatcgctcacaacggatggtgtca 229 |||||||| | ||||||||| ||||| ||| |||||||||||| Sbjct: 13122 aggtacagcttgatgagctcgtcgcttacagcggatggtgtca 13080
>ref|XM_633536.1| Dictyostelium discoideum hypothetical protein (DDB0218605), partial mRNA Length = 3675 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 487 tcaacaaccccatcagcaccaacaa 511 |||||||||||||||||| |||||| Sbjct: 3388 tcaacaaccccatcagcaacaacaa 3412
>ref|XM_594827.2| PREDICTED: Bos taurus similar to Translation initiation factor eIF-2B alpha subunit (eIF-2B GDP-GTP exchange factor) (LOC516670), mRNA Length = 1034 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Minus Query: 469 ttaataattcctccactttcaacaaccccatcagcaccaac 509 ||||| |||||||| |||||||||| || ||||||||||| Sbjct: 739 ttaatgattcctccgttttcaacaactccttcagcaccaac 699
>emb|CR974571.9| Mouse DNA sequence from clone RP23-145P19 on chromosome 12, complete sequence Length = 219782 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 54 ttttagagaattcttcaagacattt 78 |||||||||||||||||| |||||| Sbjct: 131707 ttttagagaattcttcaatacattt 131731
>emb|CR536531.1| Homo sapiens full open reading frame cDNA clone RZPDo834H0220D for gene LPXN, leupaxin; complete cds, incl. stopcodon Length = 1161 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 192 cagttggatgagctcatcgctcaca 216 ||||||||||||||||| ||||||| Sbjct: 274 cagttggatgagctcatggctcaca 298
>dbj|AB169786.1| Macaca fascicularis brain cDNA, clone: QtrA-13377, similar to human eukaryotic translation initiation factor 2B, subunit 1alpha, 26kDa (EIF2B1), mRNA, RefSeq: NM_001414.1 Length = 1902 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Minus Query: 469 ttaataattcctccactttcaacaaccccatcagcaccaac 509 |||||||||||||| |||||||||| || || |||||||| Sbjct: 728 ttaataattcctccgttttcaacaactccttcggcaccaac 688
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 450 ctgataagtccccatcatatt 470 ||||||||||||||||||||| Sbjct: 27973364 ctgataagtccccatcatatt 27973384
>dbj|AP004797.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0547F09 Length = 140615 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 450 ctgataagtccccatcatatt 470 ||||||||||||||||||||| Sbjct: 18183 ctgataagtccccatcatatt 18203
>dbj|AP003723.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0003H08 Length = 142068 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 450 ctgataagtccccatcatatt 470 ||||||||||||||||||||| Sbjct: 127287 ctgataagtccccatcatatt 127307
>gb|AC151770.1| Ornithorhynchus anatinus chromosome UNK clone OABb-325A1, complete sequence Length = 114581 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 tttcagcagcggggagaaga 95 |||||||||||||||||||| Sbjct: 23825 tttcagcagcggggagaaga 23806
>gb|BC019035.2| Homo sapiens leupaxin, mRNA (cDNA clone MGC:20667 IMAGE:4575069), complete cds Length = 1843 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 cagttggatgagctcatcgctcac 215 ||||||||||||||||| |||||| Sbjct: 341 cagttggatgagctcatggctcac 364
>gb|CP000082.1| Psychrobacter arcticus 273-4, complete genome Length = 2650701 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 cagcaccaacaaataccatg 519 |||||||||||||||||||| Sbjct: 2411554 cagcaccaacaaataccatg 2411573
>gb|BC007490.1| Homo sapiens leupaxin, mRNA (cDNA clone IMAGE:3831258), partial cds Length = 2125 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 cagttggatgagctcatcgctcac 215 ||||||||||||||||| |||||| Sbjct: 347 cagttggatgagctcatggctcac 370
>gb|AC122260.3| Mus musculus BAC clone RP23-185M15 from 6, complete sequence Length = 203877 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 tgactccagaacactaggat 26 |||||||||||||||||||| Sbjct: 133932 tgactccagaacactaggat 133951
>gb|AC116138.21| Mus musculus chromosome 10, clone RP23-123D17, complete sequence Length = 219004 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 477 tcctccactttcaacaaccccatc 500 ||||||||||| |||||||||||| Sbjct: 49097 tcctccactttaaacaaccccatc 49120
>gb|AC102317.7| Mus musculus chromosome 18, clone RP24-444M6, complete sequence Length = 194567 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 228 cagaacaccaaggtcagtcaaaag 251 ||||||||||||||||||| |||| Sbjct: 48205 cagaacaccaaggtcagtctaaag 48182
>gb|AC152503.5| Mus musculus BAC clone RP23-190G10 from chromosome 16, complete sequence Length = 204940 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 atcatattaataattcctcc 482 |||||||||||||||||||| Sbjct: 125614 atcatattaataattcctcc 125595
>ref|NM_004811.1| Homo sapiens leupaxin (LPXN), mRNA Length = 1875 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 cagttggatgagctcatcgctcac 215 ||||||||||||||||| |||||| Sbjct: 367 cagttggatgagctcatggctcac 390
>emb|AL138774.9| Human DNA sequence from clone RP4-780I11 on chromosome 10, complete sequence Length = 73916 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 tcccctcacctaatgtttta 58 |||||||||||||||||||| Sbjct: 36334 tcccctcacctaatgtttta 36353
>emb|CR759788.7| Zebrafish DNA sequence from clone CH211-153F13, complete sequence Length = 197075 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 456 agtccccatcatattaataattcc 479 ||||| |||||||||||||||||| Sbjct: 51243 agtcctcatcatattaataattcc 51266
>emb|CR612739.1| full-length cDNA clone CS0DG007YG12 of B cells (Ramos cell line) of Homo sapiens (human) Length = 1783 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 cagttggatgagctcatcgctcac 215 ||||||||||||||||| |||||| Sbjct: 343 cagttggatgagctcatggctcac 366
>emb|CR591836.1| full-length cDNA clone CS0DH004YG07 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1791 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 cagttggatgagctcatcgctcac 215 ||||||||||||||||| |||||| Sbjct: 343 cagttggatgagctcatggctcac 366
>gb|AC106884.5| Homo sapiens BAC clone RP11-1366O24 from 4, complete sequence Length = 203424 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 ccttctggtccaggggatat 378 |||||||||||||||||||| Sbjct: 194033 ccttctggtccaggggatat 194052
>dbj|AK081599.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130049E20 product:unclassifiable, full insert sequence Length = 1949 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 228 cagaacaccaaggtcagtcaaaag 251 ||||||||||||||||||| |||| Sbjct: 155 cagaacaccaaggtcagtctaaag 132
>emb|BX649314.6| Zebrafish DNA sequence from clone DKEYP-111A3 in linkage group 23, complete sequence Length = 170403 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 425 tcatgctatgagctacaagagcta 448 |||||| ||||||||||||||||| Sbjct: 106352 tcatgccatgagctacaagagcta 106329
>emb|BX649390.12| Zebrafish DNA sequence from clone DKEY-261L2 in linkage group 2, complete sequence Length = 184594 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 tgtcatgtccttctggtcca 370 |||||||||||||||||||| Sbjct: 96043 tgtcatgtccttctggtcca 96024
>gb|AC019118.7| Homo sapiens BAC clone RP11-513H7 from 2, complete sequence Length = 188914 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 caacttccacaccagcaggt 315 |||||||||||||||||||| Sbjct: 167681 caacttccacaccagcaggt 167662
>dbj|AK223165.1| Homo sapiens mRNA for leupaxin variant, clone: LNG04603 Length = 1819 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 cagttggatgagctcatcgctcac 215 ||||||||||||||||| |||||| Sbjct: 358 cagttggatgagctcatggctcac 381
>gb|AC140385.3| Mus musculus BAC clone RP23-173G20 from chromosome 6, complete sequence Length = 179564 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 tgactccagaacactaggat 26 |||||||||||||||||||| Sbjct: 171344 tgactccagaacactaggat 171325
>dbj|AP001872.3| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2009O17, complete sequences Length = 87006 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 192 cagttggatgagctcatcgctcac 215 ||||||||||||||||| |||||| Sbjct: 28867 cagttggatgagctcatggctcac 28844
>dbj|AP003557.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-655C2, complete sequences Length = 184280 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 192 cagttggatgagctcatcgctcac 215 ||||||||||||||||| |||||| Sbjct: 95391 cagttggatgagctcatggctcac 95368
>gb|AF062075.1|AF062075 Homo sapiens leupaxin mRNA, complete cds Length = 1875 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 cagttggatgagctcatcgctcac 215 ||||||||||||||||| |||||| Sbjct: 367 cagttggatgagctcatggctcac 390
>gb|AC150035.3| Mus musculus BAC clone RP23-348A6 from 16, complete sequence Length = 188444 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 atcatattaataattcctcc 482 |||||||||||||||||||| Sbjct: 38912 atcatattaataattcctcc 38893 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,770,840 Number of Sequences: 3902068 Number of extensions: 4770840 Number of successful extensions: 81898 Number of sequences better than 10.0: 85 Number of HSP's better than 10.0 without gapping: 85 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 81697 Number of HSP's gapped (non-prelim): 200 length of query: 528 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 505 effective length of database: 17,143,297,704 effective search space: 8657365340520 effective search space used: 8657365340520 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)