ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart35f03 |
|---|---|
| Clone Library Name | barley_pub |
>SUCA2_ARATH (Q8LAD2) Succinyl-CoA ligase [GDP-forming] alpha-chain 2,| mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase 2, alpha chain) (SCS2-alpha) Length = 341 Score = 131 bits (329), Expect = 9e-31 Identities = 63/79 (79%), Positives = 75/79 (94%) Frame = -1 Query: 457 AAAFIRESKTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALREAGVTVVES 278 AAA I+E+ T+KPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIK+LR+AGV VVES Sbjct: 263 AAALIKENGTDKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKSLRDAGVKVVES 322 Query: 277 PAKIGSTMFEIFKQRGMVE 221 PAKIG+ MFE+F++RG+++ Sbjct: 323 PAKIGAAMFELFQERGLLK 341
>SUCA1_ARATH (P68209) Succinyl-CoA ligase [GDP-forming] alpha-chain 1,| mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase 1, alpha chain) (SCS1-alpha) Length = 347 Score = 129 bits (324), Expect = 3e-30 Identities = 63/79 (79%), Positives = 73/79 (92%) Frame = -1 Query: 457 AAAFIRESKTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALREAGVTVVES 278 AAA I+ S TEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIK+L +AGV VVES Sbjct: 268 AAALIKASGTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKSLNDAGVKVVES 327 Query: 277 PAKIGSTMFEIFKQRGMVE 221 PAKIGS M+E+F++RG+++ Sbjct: 328 PAKIGSAMYELFQERGLLK 346
>SUCA_CAEEL (P53596) Probable succinyl-CoA ligase [GDP-forming] alpha-chain,| mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase, alpha chain) (SCS-alpha) Length = 322 Score = 103 bits (256), Expect = 3e-22 Identities = 51/75 (68%), Positives = 62/75 (82%), Gaps = 3/75 (4%) Frame = -1 Query: 457 AAAFIRESKT---EKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALREAGVTV 287 AAA+++E + KPVV+FIAG+TAPPGRRMGHAGAI+SGGKGTA DKI ALREAGV V Sbjct: 244 AAAYLKEHNSGANRKPVVSFIAGVTAPPGRRMGHAGAIISGGKGTAADKINALREAGVVV 303 Query: 286 VESPAKIGSTMFEIF 242 +SPAK+G++M F Sbjct: 304 TDSPAKLGTSMATAF 318
>SUCA_MOUSE (Q9WUM5) Succinyl-CoA ligase [GDP-forming] alpha-chain,| mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase, alpha chain) (SCS-alpha) Length = 333 Score = 98.6 bits (244), Expect = 7e-21 Identities = 48/81 (59%), Positives = 67/81 (82%), Gaps = 3/81 (3%) Frame = -1 Query: 457 AAAFIRESKT---EKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALREAGVTV 287 AAAF++E + KPVV+FIAG+TAPPGRRMGHAGAI++GGKG A++KI AL+ AGV V Sbjct: 253 AAAFLKEHNSGPKAKPVVSFIAGITAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVVV 312 Query: 286 VESPAKIGSTMFEIFKQRGMV 224 SPA++G+T+++ F++R M+ Sbjct: 313 SMSPAQLGTTIYKEFEKRKML 333
>SUCD_RICPR (O08371) Succinyl-CoA synthetase alpha chain (EC 6.2.1.5)| (SCS-alpha) Length = 292 Score = 97.4 bits (241), Expect = 1e-20 Identities = 43/74 (58%), Positives = 60/74 (81%) Frame = -1 Query: 457 AAAFIRESKTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALREAGVTVVES 278 AA FI++SK +KP+V+FIAG+TAP +RMGHAGAI+SGGKG+A+DK++ L+ AGV + S Sbjct: 218 AADFIKQSKIKKPIVSFIAGITAPADKRMGHAGAIISGGKGSAEDKVEVLQSAGVIITRS 277 Query: 277 PAKIGSTMFEIFKQ 236 PA IG TM ++ + Sbjct: 278 PADIGKTMLDLLNK 291
>SUCA_DICDI (P36967) Succinyl-CoA ligase [GDP-forming] alpha-chain,| mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase, alpha chain) (SCS-alpha) Length = 310 Score = 96.7 bits (239), Expect = 3e-20 Identities = 46/68 (67%), Positives = 58/68 (85%) Frame = -1 Query: 457 AAAFIRESKTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALREAGVTVVES 278 AA ++ ++ T+KPVV+FIAGL+APPGRRMGHAGAI+SGGKG A KI+AL+ AGVTV S Sbjct: 238 AAQWLIDNPTDKPVVSFIAGLSAPPGRRMGHAGAIISGGKGDANSKIEALKAAGVTVTFS 297 Query: 277 PAKIGSTM 254 PAK+G T+ Sbjct: 298 PAKLGETI 305
>SUCA_HUMAN (P53597) Succinyl-CoA ligase [GDP-forming] alpha-chain,| mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase, alpha chain) (SCS-alpha) Length = 333 Score = 96.7 bits (239), Expect = 3e-20 Identities = 47/81 (58%), Positives = 66/81 (81%), Gaps = 3/81 (3%) Frame = -1 Query: 457 AAAFIRESKT---EKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALREAGVTV 287 AA F+++ + KPVV+FIAGLTAPPGRRMGHAGAI++GGKG A++KI AL+ AGV V Sbjct: 253 AAEFLKQHNSGPNSKPVVSFIAGLTAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVVV 312 Query: 286 VESPAKIGSTMFEIFKQRGMV 224 SPA++G+T+++ F++R M+ Sbjct: 313 SMSPAQLGTTIYKEFEKRKML 333
>SUCA_PIG (O19069) Succinyl-CoA ligase [GDP-forming] alpha-chain,| mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase, alpha chain) (SCS-alpha) Length = 350 Score = 96.3 bits (238), Expect = 3e-20 Identities = 47/81 (58%), Positives = 66/81 (81%), Gaps = 3/81 (3%) Frame = -1 Query: 457 AAAFIRESKT---EKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALREAGVTV 287 AA F+++ + KPVV+FIAGLTAPPGRRMGHAGAI++GGKG A++KI AL+ AGV V Sbjct: 270 AAEFLKQHNSGPKSKPVVSFIAGLTAPPGRRMGHAGAIIAGGKGGAKEKITALQSAGVVV 329 Query: 286 VESPAKIGSTMFEIFKQRGMV 224 SPA++G+T+++ F++R M+ Sbjct: 330 SMSPAQLGTTIYKEFEKRKML 350
>SUCA_RAT (P13086) Succinyl-CoA ligase [GDP-forming] alpha-chain,| mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase, alpha chain) (SCS-alpha) Length = 333 Score = 95.5 bits (236), Expect = 6e-20 Identities = 47/81 (58%), Positives = 65/81 (80%), Gaps = 3/81 (3%) Frame = -1 Query: 457 AAAFIRESKT---EKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALREAGVTV 287 AA F++E + KPVV+FIAG+TAPPGRRMGHAGAI++GGKG A++KI AL+ AGV V Sbjct: 253 AAEFLKEHNSGPKAKPVVSFIAGITAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVIV 312 Query: 286 VESPAKIGSTMFEIFKQRGMV 224 SPA++G+ M++ F++R M+ Sbjct: 313 SMSPAQLGTCMYKEFEKRKML 333
>SUCD_AQUAE (O67547) Succinyl-CoA synthetase alpha chain (EC 6.2.1.5)| (SCS-alpha) Length = 305 Score = 94.0 bits (232), Expect = 2e-19 Identities = 48/83 (57%), Positives = 65/83 (78%) Frame = -1 Query: 457 AAAFIRESKTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALREAGVTVVES 278 AA +I E + +KPV A+IAG+TAPPG+RMGHAGAI+ GGKGTA+ K++AL +AG V+E+ Sbjct: 220 AAEYI-EKEVDKPVFAYIAGITAPPGKRMGHAGAIIMGGKGTAKAKMEALEKAGAYVIEN 278 Query: 277 PAKIGSTMFEIFKQRGMVE*REE 209 PAKIG T+ +I K ++E EE Sbjct: 279 PAKIGETVAKILK---VIELEEE 298
>SUCD_STAAW (Q8NX01) Succinyl-CoA synthetase alpha chain (EC 6.2.1.5)| (SCS-alpha) Length = 302 Score = 94.0 bits (232), Expect = 2e-19 Identities = 46/79 (58%), Positives = 59/79 (74%) Frame = -1 Query: 457 AAAFIRESKTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALREAGVTVVES 278 AA +I+ + T KPVV FI G TAPPG+RMGHAGAI+SGGKGTA++KIK L GV + Sbjct: 218 AAEWIKANMT-KPVVGFIGGQTAPPGKRMGHAGAIISGGKGTAEEKIKTLNSCGVKTAAT 276 Query: 277 PAKIGSTMFEIFKQRGMVE 221 P++IGST+ E K+ G+ E Sbjct: 277 PSEIGSTLIEAAKEAGIYE 295
>SUCD_STAAS (Q6G9W7) Succinyl-CoA synthetase alpha chain (EC 6.2.1.5)| (SCS-alpha) Length = 302 Score = 94.0 bits (232), Expect = 2e-19 Identities = 46/79 (58%), Positives = 59/79 (74%) Frame = -1 Query: 457 AAAFIRESKTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALREAGVTVVES 278 AA +I+ + T KPVV FI G TAPPG+RMGHAGAI+SGGKGTA++KIK L GV + Sbjct: 218 AAEWIKANMT-KPVVGFIGGQTAPPGKRMGHAGAIISGGKGTAEEKIKTLNSCGVKTAAT 276 Query: 277 PAKIGSTMFEIFKQRGMVE 221 P++IGST+ E K+ G+ E Sbjct: 277 PSEIGSTLIEAAKEAGIYE 295
>SUCD_STAAR (Q6GHI9) Succinyl-CoA synthetase alpha chain (EC 6.2.1.5)| (SCS-alpha) Length = 302 Score = 94.0 bits (232), Expect = 2e-19 Identities = 46/79 (58%), Positives = 59/79 (74%) Frame = -1 Query: 457 AAAFIRESKTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALREAGVTVVES 278 AA +I+ + T KPVV FI G TAPPG+RMGHAGAI+SGGKGTA++KIK L GV + Sbjct: 218 AAEWIKANMT-KPVVGFIGGQTAPPGKRMGHAGAIISGGKGTAEEKIKTLNSCGVKTAAT 276 Query: 277 PAKIGSTMFEIFKQRGMVE 221 P++IGST+ E K+ G+ E Sbjct: 277 PSEIGSTLIEAAKEAGIYE 295
>SUCD_STAAN (P99070) Succinyl-CoA synthetase alpha chain (EC 6.2.1.5)| (SCS-alpha) Length = 302 Score = 94.0 bits (232), Expect = 2e-19 Identities = 46/79 (58%), Positives = 59/79 (74%) Frame = -1 Query: 457 AAAFIRESKTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALREAGVTVVES 278 AA +I+ + T KPVV FI G TAPPG+RMGHAGAI+SGGKGTA++KIK L GV + Sbjct: 218 AAEWIKANMT-KPVVGFIGGQTAPPGKRMGHAGAIISGGKGTAEEKIKTLNSCGVKTAAT 276 Query: 277 PAKIGSTMFEIFKQRGMVE 221 P++IGST+ E K+ G+ E Sbjct: 277 PSEIGSTLIEAAKEAGIYE 295
>SUCD_STAAM (P66866) Succinyl-CoA synthetase alpha chain (EC 6.2.1.5)| (SCS-alpha) Length = 302 Score = 94.0 bits (232), Expect = 2e-19 Identities = 46/79 (58%), Positives = 59/79 (74%) Frame = -1 Query: 457 AAAFIRESKTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALREAGVTVVES 278 AA +I+ + T KPVV FI G TAPPG+RMGHAGAI+SGGKGTA++KIK L GV + Sbjct: 218 AAEWIKANMT-KPVVGFIGGQTAPPGKRMGHAGAIISGGKGTAEEKIKTLNSCGVKTAAT 276 Query: 277 PAKIGSTMFEIFKQRGMVE 221 P++IGST+ E K+ G+ E Sbjct: 277 PSEIGSTLIEAAKEAGIYE 295
>SUCD_STAAC (Q5HGI6) Succinyl-CoA synthetase alpha chain (EC 6.2.1.5)| (SCS-alpha) Length = 302 Score = 94.0 bits (232), Expect = 2e-19 Identities = 46/79 (58%), Positives = 59/79 (74%) Frame = -1 Query: 457 AAAFIRESKTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALREAGVTVVES 278 AA +I+ + T KPVV FI G TAPPG+RMGHAGAI+SGGKGTA++KIK L GV + Sbjct: 218 AAEWIKANMT-KPVVGFIGGQTAPPGKRMGHAGAIISGGKGTAEEKIKTLNSCGVKTAAT 276 Query: 277 PAKIGSTMFEIFKQRGMVE 221 P++IGST+ E K+ G+ E Sbjct: 277 PSEIGSTLIEAAKEAGIYE 295
>SUCA3_TRIVA (P53401) Succinyl-CoA ligase [GDP-forming] alpha-chain 3 precursor| (EC 6.2.1.4) (Succinyl-CoA synthetase, alpha chain 3) Length = 309 Score = 93.6 bits (231), Expect = 2e-19 Identities = 48/80 (60%), Positives = 58/80 (72%), Gaps = 2/80 (2%) Frame = -1 Query: 457 AAAFIRESKT--EKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALREAGVTVV 284 AA +I ++K EKPVVAFIAG TAPPG+RMGHAGAIVSGGKGTA+ K KAL AGV + Sbjct: 230 AAEWIAKTKLTQEKPVVAFIAGATAPPGKRMGHAGAIVSGGKGTAEGKYKALEAAGVRIA 289 Query: 283 ESPAKIGSTMFEIFKQRGMV 224 P +G +FE K+ G + Sbjct: 290 RHPGNMGKFIFEEMKRMGKI 309
>SUCA2_TRIVA (P53400) Succinyl-CoA ligase [GDP-forming] alpha-chain 2 precursor| (EC 6.2.1.4) (Succinyl-CoA synthetase, alpha chain 2) Length = 309 Score = 93.2 bits (230), Expect = 3e-19 Identities = 48/80 (60%), Positives = 58/80 (72%), Gaps = 2/80 (2%) Frame = -1 Query: 457 AAAFIRESKT--EKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALREAGVTVV 284 AA +I ++K EKPVVAFIAG TAPPG+RMGHAGAIVSGGKGTA+ K KAL AGV + Sbjct: 230 AAEWIAKTKLTQEKPVVAFIAGATAPPGKRMGHAGAIVSGGKGTAEGKYKALEAAGVRIA 289 Query: 283 ESPAKIGSTMFEIFKQRGMV 224 P +G +FE K+ G + Sbjct: 290 RHPGNMGKFIFEEMKRLGKI 309
>SUCD_STAEQ (Q5HPU4) Succinyl-CoA synthetase alpha chain (EC 6.2.1.5)| (SCS-alpha) Length = 302 Score = 92.8 bits (229), Expect = 4e-19 Identities = 44/79 (55%), Positives = 60/79 (75%) Frame = -1 Query: 457 AAAFIRESKTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALREAGVTVVES 278 AA +I+E+ KPVV FI G TAPPG+RMGHAGAI+SGGKGTA +KIK L + GV ++ Sbjct: 218 AAQWIKENMN-KPVVGFIGGQTAPPGKRMGHAGAIISGGKGTASEKIKTLNDCGVETADT 276 Query: 277 PAKIGSTMFEIFKQRGMVE 221 P++IG+T+ + K+ G+ E Sbjct: 277 PSEIGTTLIDAAKKAGIYE 295
>SUCD_STAES (Q8CPH4) Succinyl-CoA synthetase alpha chain (EC 6.2.1.5)| (SCS-alpha) Length = 302 Score = 92.4 bits (228), Expect = 5e-19 Identities = 43/79 (54%), Positives = 60/79 (75%) Frame = -1 Query: 457 AAAFIRESKTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALREAGVTVVES 278 AA +I+E+ KPV+ FI G TAPPG+RMGHAGAI+SGGKGTA +KIK L + GV ++ Sbjct: 218 AAQWIKENMN-KPVIGFIGGQTAPPGKRMGHAGAIISGGKGTASEKIKTLNDCGVETADT 276 Query: 277 PAKIGSTMFEIFKQRGMVE 221 P++IG+T+ + K+ G+ E Sbjct: 277 PSEIGTTLIDAAKKAGIYE 295
>SUCD_BACSU (P80865) Succinyl-CoA synthetase alpha chain (EC 6.2.1.5)| (SCS-alpha) (Vegetative protein 239) (VEG239) Length = 299 Score = 92.0 bits (227), Expect = 6e-19 Identities = 42/79 (53%), Positives = 59/79 (74%) Frame = -1 Query: 457 AAAFIRESKTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALREAGVTVVES 278 AA +++ + T KPVV FI G TAPPG+RMGHAGAI+SGGKGTA +KIK L G+ V E+ Sbjct: 217 AAEWVKANMT-KPVVGFIGGKTAPPGKRMGHAGAIISGGKGTADEKIKTLNACGIEVAET 275 Query: 277 PAKIGSTMFEIFKQRGMVE 221 P+ +G T+ ++ K++ + E Sbjct: 276 PSVMGETLIKVLKEKNLFE 294
>SUCA_DROME (Q94522) Succinyl-CoA ligase [GDP-forming] alpha-chain,| mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase, alpha chain) (SCS-alpha) Length = 328 Score = 91.3 bits (225), Expect = 1e-18 Identities = 44/67 (65%), Positives = 54/67 (80%) Frame = -1 Query: 424 KPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALREAGVTVVESPAKIGSTMFEI 245 KPVV+FIAG++APPGRRMGHAGAI+SGGKG A DKI AL +AGV V SPAK+G +F+ Sbjct: 262 KPVVSFIAGVSAPPGRRMGHAGAIISGGKGGANDKIAALEKAGVIVTRSPAKMGHELFKE 321 Query: 244 FKQRGMV 224 K+ +V Sbjct: 322 MKRLELV 328
>SUCA1_TRIVA (P53399) Succinyl-CoA ligase [GDP-forming] alpha-chain 1 precursor| (EC 6.2.1.4) (Succinyl-CoA synthetase, alpha chain 1) Length = 309 Score = 90.5 bits (223), Expect = 2e-18 Identities = 47/80 (58%), Positives = 57/80 (71%), Gaps = 2/80 (2%) Frame = -1 Query: 457 AAAFIRESKT--EKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALREAGVTVV 284 AA +I ++K EKPVVA IAG TAPPG+RMGHAGAIVSGGKGTA+ K KAL AGV + Sbjct: 230 AAEWIAKTKLTQEKPVVASIAGATAPPGKRMGHAGAIVSGGKGTAEGKYKALEAAGVRIA 289 Query: 283 ESPAKIGSTMFEIFKQRGMV 224 P +G +FE K+ G + Sbjct: 290 RHPGNMGKFIFEEMKRMGKI 309
>SUCD_COXBU (P53591) Succinyl-CoA synthetase alpha chain (EC 6.2.1.5)| (SCS-alpha) Length = 294 Score = 90.5 bits (223), Expect = 2e-18 Identities = 45/70 (64%), Positives = 57/70 (81%) Frame = -1 Query: 457 AAAFIRESKTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALREAGVTVVES 278 AA FI +S +KPV+++IAG+TAPPG+RMGHAGAI++GGKGTA DK AL AGV VV+S Sbjct: 219 AAEFI-QSNVKKPVISYIAGVTAPPGKRMGHAGAIIAGGKGTAADKYAALEAAGVFVVKS 277 Query: 277 PAKIGSTMFE 248 PA+IG + E Sbjct: 278 PAEIGKGVAE 287
>SUCD_HAEIN (P45102) Succinyl-CoA synthetase alpha chain (EC 6.2.1.5)| (SCS-alpha) Length = 293 Score = 89.7 bits (221), Expect = 3e-18 Identities = 46/73 (63%), Positives = 59/73 (80%) Frame = -1 Query: 457 AAAFIRESKTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALREAGVTVVES 278 AA FI+++ T KPVVA+IAG+TAP G+RMGHAGAI+SGGKGTA +KI AL AGVT V+S Sbjct: 218 AAIFIKDNVT-KPVVAYIAGITAPKGKRMGHAGAIISGGKGTAVEKIAALEAAGVTCVKS 276 Query: 277 PAKIGSTMFEIFK 239 A+IG + ++ K Sbjct: 277 LAEIGEALRKLLK 289
>SUCD_PSEAE (Q51567) Succinyl-CoA synthetase alpha chain (EC 6.2.1.5)| (SCS-alpha) Length = 295 Score = 89.7 bits (221), Expect = 3e-18 Identities = 45/71 (63%), Positives = 57/71 (80%) Frame = -1 Query: 457 AAAFIRESKTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALREAGVTVVES 278 AAAFI+ + T KPVV++IAG+TAPPG+RMGHAGAI+SGGKGTA +K AL++AGV V S Sbjct: 218 AAAFIKANVT-KPVVSYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAALQDAGVKTVRS 276 Query: 277 PAKIGSTMFEI 245 A IG + E+ Sbjct: 277 LADIGKALAEL 287
>SUCA_SCHPO (O13750) Probable succinyl-CoA ligase [GDP-forming] alpha-chain,| mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase, alpha chain) (SCS-alpha) Length = 331 Score = 85.5 bits (210), Expect = 6e-17 Identities = 46/74 (62%), Positives = 53/74 (71%), Gaps = 4/74 (5%) Frame = -1 Query: 457 AAAFIRESK----TEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALREAGVT 290 AA FIR + T KPVV+FIAG TAP GRRMGHAGAIV+GGKGTA K +AL AGV Sbjct: 251 AAEFIRAANASRSTPKPVVSFIAGATAPKGRRMGHAGAIVAGGKGTAAAKFEALEAAGVR 310 Query: 289 VVESPAKIGSTMFE 248 + SPA +GS + E Sbjct: 311 ISRSPATLGSLIVE 324
>SUCD2_ARCFU (O28098) Succinyl-CoA synthetase alpha chain 2 (EC 6.2.1.5)| (SCS-alpha 2) Length = 287 Score = 84.0 bits (206), Expect = 2e-16 Identities = 42/71 (59%), Positives = 52/71 (73%) Frame = -1 Query: 457 AAAFIRESKTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALREAGVTVVES 278 AA FIRE KPVV ++AGLTAPPG+RMGHAGAI+ GG GTA+ KIKAL AG V ++ Sbjct: 218 AAEFIREMS--KPVVGYVAGLTAPPGKRMGHAGAIIEGGVGTAESKIKALEAAGARVGKT 275 Query: 277 PAKIGSTMFEI 245 P ++ + EI Sbjct: 276 PMEVAELVAEI 286
>SUCD_ECOLI (P0AGE9) Succinyl-CoA synthetase alpha chain (EC 6.2.1.5)| (SCS-alpha) Length = 288 Score = 83.6 bits (205), Expect = 2e-16 Identities = 43/73 (58%), Positives = 53/73 (72%) Frame = -1 Query: 457 AAAFIRESKTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALREAGVTVVES 278 AAA+I+E T KPVV +IAG+TAP G+RMGHAGAI++GGKGTA +K AL AGV V S Sbjct: 217 AAAYIKEHVT-KPVVGYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRS 275 Query: 277 PAKIGSTMFEIFK 239 A IG + + K Sbjct: 276 LADIGEALKTVLK 288
>SUCD_ECOL6 (P0AGF0) Succinyl-CoA synthetase alpha chain (EC 6.2.1.5)| (SCS-alpha) Length = 288 Score = 83.6 bits (205), Expect = 2e-16 Identities = 43/73 (58%), Positives = 53/73 (72%) Frame = -1 Query: 457 AAAFIRESKTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALREAGVTVVES 278 AAA+I+E T KPVV +IAG+TAP G+RMGHAGAI++GGKGTA +K AL AGV V S Sbjct: 217 AAAYIKEHVT-KPVVGYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRS 275 Query: 277 PAKIGSTMFEIFK 239 A IG + + K Sbjct: 276 LADIGEALKTVLK 288
>SUCD_ECO57 (P0AGF1) Succinyl-CoA synthetase alpha chain (EC 6.2.1.5)| (SCS-alpha) Length = 288 Score = 83.6 bits (205), Expect = 2e-16 Identities = 43/73 (58%), Positives = 53/73 (72%) Frame = -1 Query: 457 AAAFIRESKTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALREAGVTVVES 278 AAA+I+E T KPVV +IAG+TAP G+RMGHAGAI++GGKGTA +K AL AGV V S Sbjct: 217 AAAYIKEHVT-KPVVGYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRS 275 Query: 277 PAKIGSTMFEIFK 239 A IG + + K Sbjct: 276 LADIGEALKTVLK 288
>SUCD1_ARCFU (O28733) Succinyl-CoA synthetase alpha chain 1 (EC 6.2.1.5)| (SCS-alpha 1) Length = 291 Score = 75.5 bits (184), Expect = 6e-14 Identities = 38/60 (63%), Positives = 46/60 (76%) Frame = -1 Query: 457 AAAFIRESKTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALREAGVTVVES 278 AA FI++ KPVVAFIAG TAPPG+RMGHAGAI+ G GTA+ K+ ALR+AG V E+ Sbjct: 221 AAEFIKQMS--KPVVAFIAGRTAPPGKRMGHAGAIIEGSTGTAEAKMAALRDAGARVAET 278
>SUCD_METTH (O26663) Succinyl-CoA synthetase alpha chain (EC 6.2.1.5)| (SCS-alpha) Length = 293 Score = 74.3 bits (181), Expect = 1e-13 Identities = 37/64 (57%), Positives = 46/64 (71%) Frame = -1 Query: 457 AAAFIRESKTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALREAGVTVVES 278 AA++I + KPV AFI+G TAPPG+RMGHAGAI+ GG GTA K +AL AG VV+ Sbjct: 221 AASYIEQMS--KPVFAFISGATAPPGKRMGHAGAIIEGGTGTASSKREALEAAGAVVVDR 278 Query: 277 PAKI 266 P+ I Sbjct: 279 PSAI 282
>SUCD_METJA (Q58643) Succinyl-CoA synthetase alpha chain (EC 6.2.1.5)| (SCS-alpha) Length = 294 Score = 71.2 bits (173), Expect = 1e-12 Identities = 37/64 (57%), Positives = 47/64 (73%) Frame = -1 Query: 457 AAAFIRESKTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALREAGVTVVES 278 AA FI + K KPV+ +IAG +AP G+RMGHAGAIV GKGTA+ K+KAL EAG V ++ Sbjct: 223 AAKFIEKMK--KPVIGYIAGQSAPEGKRMGHAGAIVEKGKGTAESKMKALEEAGAYVAKN 280 Query: 277 PAKI 266 + I Sbjct: 281 ISDI 284
>SUCD_MYCTU (P71558) Succinyl-CoA synthetase alpha chain (EC 6.2.1.5)| (SCS-alpha) Length = 303 Score = 68.2 bits (165), Expect = 1e-11 Identities = 37/71 (52%), Positives = 47/71 (66%) Frame = -1 Query: 457 AAAFIRESKTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALREAGVTVVES 278 AA FI+ + KPVV ++AG TAP G+ MGHAGAIVSG GTA K +AL AGV V ++ Sbjct: 230 AADFIK-TNVSKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKT 288 Query: 277 PAKIGSTMFEI 245 P+ + EI Sbjct: 289 PSATAALAREI 299
>SUCD_MYCBO (Q7U0Z0) Succinyl-CoA synthetase alpha chain (EC 6.2.1.5)| (SCS-alpha) Length = 303 Score = 68.2 bits (165), Expect = 1e-11 Identities = 37/71 (52%), Positives = 47/71 (66%) Frame = -1 Query: 457 AAAFIRESKTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALREAGVTVVES 278 AA FI+ + KPVV ++AG TAP G+ MGHAGAIVSG GTA K +AL AGV V ++ Sbjct: 230 AADFIK-TNVSKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKT 288 Query: 277 PAKIGSTMFEI 245 P+ + EI Sbjct: 289 PSATAALAREI 299
>SUCD_THETH (P09143) Succinyl-CoA synthetase alpha chain (EC 6.2.1.5)| (SCS-alpha) Length = 288 Score = 64.7 bits (156), Expect = 1e-10 Identities = 30/60 (50%), Positives = 44/60 (73%) Frame = -1 Query: 457 AAAFIRESKTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALREAGVTVVES 278 AAA++++ +KPVV FI G +AP G+RMGHAGAI+ G GT + K++A EAG+ V ++ Sbjct: 217 AAAWVKDHM-KKPVVGFIGGRSAPKGKRMGHAGAIIMGNVGTPESKLRAFAEAGIPVADT 275
>SUCA_YEAST (P53598) Succinyl-CoA ligase [GDP-forming] alpha-chain,| mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase, alpha chain) (SCS-alpha) Length = 329 Score = 59.3 bits (142), Expect = 4e-09 Identities = 35/78 (44%), Positives = 46/78 (58%), Gaps = 6/78 (7%) Frame = -1 Query: 457 AAAFIRESKTEK----PVVAFIAGLTAPP--GRRMGHAGAIVSGGKGTAQDKIKALREAG 296 AA F++E + PV +FIAG A G RMGH+GAIV G A+ K +ALR+ G Sbjct: 248 AAQFLKEYNFSRSKPMPVASFIAGTVAGQMKGVRMGHSGAIVEGSGTDAESKKQALRDVG 307 Query: 295 VTVVESPAKIGSTMFEIF 242 V VVESP +G + + F Sbjct: 308 VAVVESPGYLGQALLDQF 325
>MTKB_METEX (P53595) Malate--CoA ligase alpha chain (EC 6.2.1.9) (Malyl-CoA| synthetase) (Malate thiokinase) (MTK-alpha) Length = 260 Score = 44.7 bits (104), Expect = 1e-04 Identities = 21/32 (65%), Positives = 28/32 (87%) Frame = -1 Query: 457 AAAFIRESKTEKPVVAFIAGLTAPPGRRMGHA 362 A+A+I+E+ + KPV+ F+AGLTAP GRRMGHA Sbjct: 222 ASAWIKENFS-KPVIGFVAGLTAPKGRRMGHA 252
>ACLY_MOUSE (Q91V92) ATP-citrate synthase (EC 2.3.3.8) (ATP-citrate| (pro-S-)-lyase) (Citrate cleavage enzyme) Length = 1091 Score = 39.3 bits (90), Expect = 0.005 Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 3/72 (4%) Frame = -1 Query: 445 IRESKTEKPVVAFIAGLTAPPGR---RMGHAGAIVSGGKGTAQDKIKALREAGVTVVESP 275 I+E + KPVV + G A + GHAGA + TA K +AL+EAGV V S Sbjct: 721 IKEGRLTKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFVPRSF 780 Query: 274 AKIGSTMFEIFK 239 ++G + +++ Sbjct: 781 DELGEIIQSVYE 792
>ACLY_RAT (P16638) ATP-citrate synthase (EC 2.3.3.8) (ATP-citrate| (pro-S-)-lyase) (Citrate cleavage enzyme) Length = 1100 Score = 39.3 bits (90), Expect = 0.005 Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 3/72 (4%) Frame = -1 Query: 445 IRESKTEKPVVAFIAGLTAPPGR---RMGHAGAIVSGGKGTAQDKIKALREAGVTVVESP 275 I+E + KPVV + G A + GHAGA + TA K +AL+EAGV V S Sbjct: 730 IKEGRLTKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFVPRSF 789 Query: 274 AKIGSTMFEIFK 239 ++G + +++ Sbjct: 790 DELGEIIQSVYE 801
>ACLY_HUMAN (P53396) ATP-citrate synthase (EC 2.3.3.8) (ATP-citrate| (pro-S-)-lyase) (Citrate cleavage enzyme) Length = 1101 Score = 38.9 bits (89), Expect = 0.006 Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 3/72 (4%) Frame = -1 Query: 445 IRESKTEKPVVAFIAGLTAPPGR---RMGHAGAIVSGGKGTAQDKIKALREAGVTVVESP 275 I+E + KP+V + G A + GHAGA + TA K +AL+EAGV V S Sbjct: 731 IKEGRLTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFVPRSF 790 Query: 274 AKIGSTMFEIFK 239 ++G + +++ Sbjct: 791 DELGEIIQSVYE 802
>ACL1_SCHPO (Q9P7W3) Probable ATP-citrate synthase subunit 1 (EC 2.3.3.8)| (ATP-citrate (pro-S-)-lyase 1) (Citrate cleavage enzyme subunit 1) Length = 615 Score = 38.5 bits (88), Expect = 0.008 Identities = 21/72 (29%), Positives = 41/72 (56%), Gaps = 3/72 (4%) Frame = -1 Query: 445 IRESKTEKPVVAFIAGLTAPPGR---RMGHAGAIVSGGKGTAQDKIKALREAGVTVVESP 275 ++ +KP+VA+ G + + + GHAG+ + TA K +A+REAG+ V E+ Sbjct: 251 VKNGTIKKPIVAWAIGTCSSMFKTEVQFGHAGSFANSELETAVAKNQAMREAGIYVPETF 310 Query: 274 AKIGSTMFEIFK 239 K+ + + E+++ Sbjct: 311 EKLPALLQEVYE 322
>CHIT_DIOJA (P80052) Acidic endochitinase (EC 3.2.1.14)| Length = 250 Score = 36.2 bits (82), Expect = 0.040 Identities = 17/39 (43%), Positives = 19/39 (48%) Frame = -3 Query: 413 CIHSWTYCTPGPSHGPCWSNCVRGQGYCPRQDQGTQGGW 297 C +S+ YC PG GPCW C G G D TQ W Sbjct: 18 CGNSYDYCGPGCQAGPCWDPC-EGDGTLTVSDIVTQEFW 55
>ACL1_NEUCR (Q8X097) Probable ATP-citrate synthase subunit 1 (EC 2.3.3.8)| (ATP-citrate (pro-S-)-lyase 1) (Citrate cleavage enzyme subunit 1) Length = 670 Score = 34.3 bits (77), Expect = 0.15 Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 3/59 (5%) Frame = -1 Query: 445 IRESKTEKPVVAFIAGLTAPPGR---RMGHAGAIVSGGKGTAQDKIKALREAGVTVVES 278 +++ KP+VA+ G A + + GHAGA + TA K K++REAG V ++ Sbjct: 287 VKQGIITKPIVAWAIGTCASMFKTEVQFGHAGAFANSQLETAATKNKSMREAGFYVPDT 345
>ACL1_SORMA (O93988) ATP-citrate synthase subunit 1 (EC 2.3.3.8) (ATP-citrate| (pro-S-)-lyase 1) (Citrate cleavage enzyme subunit 1) Length = 674 Score = 34.3 bits (77), Expect = 0.15 Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 3/59 (5%) Frame = -1 Query: 445 IRESKTEKPVVAFIAGLTAPPGR---RMGHAGAIVSGGKGTAQDKIKALREAGVTVVES 278 +++ KP+VA+ G A + + GHAGA + TA K K++REAG V ++ Sbjct: 291 VKQGIITKPIVAWAIGTCASMFKTEVQFGHAGAFANSQLETAATKNKSMREAGFYVPDT 349
>ACLY_CAEEL (P53585) Probable ATP-citrate synthase (EC 2.3.3.8) (ATP-citrate| (pro-S-)-lyase) (Citrate cleavage enzyme) Length = 1106 Score = 33.9 bits (76), Expect = 0.20 Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 3/73 (4%) Frame = -1 Query: 445 IRESKTEKPVVAFIAGLTAP---PGRRMGHAGAIVSGGKGTAQDKIKALREAGVTVVESP 275 +++ K KP+VA+ G A + GHAGA + TA K ALR +G V ES Sbjct: 731 LKQKKVTKPLVAWCIGTCADHITSEVQFGHAGASANALGETAACKNAALRASGALVPESF 790 Query: 274 AKIGSTMFEIFKQ 236 +G+ + + + + Sbjct: 791 DDLGNKIRQTYDE 803
>KADA_METIG (P43408) Adenylate kinase (EC 2.7.4.3) (ATP-AMP transphosphorylase)| Length = 192 Score = 33.5 bits (75), Expect = 0.26 Identities = 17/47 (36%), Positives = 26/47 (55%) Frame = -1 Query: 346 GGKGTAQDKIKALREAGVTVVESPAKIGSTMFEIFKQRGMVE*REEM 206 GG Q I+ L+E G+ G+ MFE+ K+ G+VE R++M Sbjct: 15 GGTTLTQKTIEKLKEEGIEY--KMVNFGTVMFEVAKEEGLVEDRDQM 59
>KADA_THEVO (Q97BV2) Adenylate kinase (EC 2.7.4.3) (ATP-AMP transphosphorylase)| Length = 181 Score = 33.1 bits (74), Expect = 0.34 Identities = 22/56 (39%), Positives = 34/56 (60%) Frame = -1 Query: 343 GKGTAQDKIKALREAGVTVVESPAKIGSTMFEIFKQRGMVE*REEMVQ*KRKHRET 176 GK T D + RE+G+ VV G+ MFE+ K+RG+VE R+++ ++ RET Sbjct: 12 GKTTVLDIVA--RESGIPVVN----YGTLMFEVAKRRGLVENRDQI---RKLSRET 58
>NUP62_HUMAN (P37198) Nuclear pore glycoprotein p62 (62 kDa nucleoporin)| Length = 522 Score = 30.8 bits (68), Expect = 1.7 Identities = 18/49 (36%), Positives = 23/49 (46%) Frame = +3 Query: 285 TTVTPASLSALILSWAVPLPPDTIAPAWPMRRPGGAVSPAMNATTGFSV 431 T TPA+ +A A P P TI P A +P +ATTG S+ Sbjct: 191 TPATPAATTAGATQPAAPTPTATITSTGPSLFASIATAPTSSATTGLSL 239
>KADA_THEAC (Q9HIT1) Adenylate kinase (EC 2.7.4.3) (ATP-AMP transphosphorylase)| Length = 183 Score = 30.8 bits (68), Expect = 1.7 Identities = 17/46 (36%), Positives = 28/46 (60%) Frame = -1 Query: 343 GKGTAQDKIKALREAGVTVVESPAKIGSTMFEIFKQRGMVE*REEM 206 GK T D + +E G+ +V G+ MF++ K+RG+VE R++M Sbjct: 12 GKTTVLDIVS--KETGIKIVN----YGTLMFDLAKKRGLVENRDQM 51
>RUMA_BURPS (Q63UT8) 23S rRNA (uracil-5-)-methyltransferase rumA (EC 2.1.1.-)| (23S rRNA(M-5-U1939)-methyltransferase) Length = 465 Score = 30.4 bits (67), Expect = 2.2 Identities = 13/43 (30%), Positives = 23/43 (53%) Frame = +3 Query: 246 ISNMVEPILAGDSTTVTPASLSALILSWAVPLPPDTIAPAWPM 374 + ++EPI A D + + + + W P PDT+AP +P+ Sbjct: 223 VLRVLEPINAADEALLREFADTHRVQFWLQPKGPDTVAPFYPL 265
>RUMA_BURP1 (Q3JRP8) 23S rRNA (uracil-5-)-methyltransferase rumA (EC 2.1.1.-)| (23S rRNA(M-5-U1939)-methyltransferase) Length = 465 Score = 30.4 bits (67), Expect = 2.2 Identities = 13/43 (30%), Positives = 23/43 (53%) Frame = +3 Query: 246 ISNMVEPILAGDSTTVTPASLSALILSWAVPLPPDTIAPAWPM 374 + ++EPI A D + + + + W P PDT+AP +P+ Sbjct: 223 VLRVLEPINAADEALLREFADTHRVQFWLQPKGPDTVAPFYPL 265
>RUMA_BURMA (Q62JV9) 23S rRNA (uracil-5-)-methyltransferase rumA (EC 2.1.1.-)| (23S rRNA(M-5-U1939)-methyltransferase) Length = 465 Score = 30.4 bits (67), Expect = 2.2 Identities = 13/43 (30%), Positives = 23/43 (53%) Frame = +3 Query: 246 ISNMVEPILAGDSTTVTPASLSALILSWAVPLPPDTIAPAWPM 374 + ++EPI A D + + + + W P PDT+AP +P+ Sbjct: 223 VLRVLEPINAADEALLREFADTHRVQFWLQPKGPDTVAPFYPL 265
>TTP1_YEAST (P38069) Protein TTP1 (Mannan synthesis protein MNN2)| Length = 597 Score = 30.4 bits (67), Expect = 2.2 Identities = 26/68 (38%), Positives = 31/68 (45%), Gaps = 6/68 (8%) Frame = -1 Query: 436 SKTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGT--AQDKIKALREAGVT----VVESP 275 +K+ K V IA L +P G G A V GGK + A IK LR G T V+ P Sbjct: 148 TKSHKDYVEHIATLVSPKGTYKGSGIATVGGGKFSLMAFLIIKTLRNMGTTLPVEVLIPP 207 Query: 274 AKIGSTMF 251 G T F Sbjct: 208 GDEGETEF 215
>CREL1_BOVIN (Q5EA46) Cysteine-rich with EGF-like domain protein 1 precursor| Length = 420 Score = 30.0 bits (66), Expect = 2.9 Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 7/49 (14%) Frame = -3 Query: 413 CIHSWTYCTP----GPSHGPCWSNCVR---GQGYCPRQDQGTQGGWGNC 288 C S C P GPS PC R G G+C + +GT+GG G+C Sbjct: 135 CSDSLKLCCPSGTFGPSCLPCPGGAERPCGGYGHC--EGEGTRGGSGHC 181
>PYRH_SULTO (Q971S6) Probable uridylate kinase (EC 2.7.4.-) (UK) (Uridine| monophosphate kinase) (UMP kinase) Length = 226 Score = 29.6 bits (65), Expect = 3.8 Identities = 16/26 (61%), Positives = 17/26 (65%) Frame = -1 Query: 370 GHAGAIVSGGKGTAQDKIKALREAGV 293 GH AIVSGG TA+ IK RE GV Sbjct: 34 GHRLAIVSGGGSTARKYIKIGRELGV 59
>CREL1_RAT (Q4V7F2) Cysteine-rich with EGF-like domain protein 1 precursor| Length = 420 Score = 29.6 bits (65), Expect = 3.8 Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 5/47 (10%) Frame = -3 Query: 413 CIHSWTYCTPGPSHGPCWSNCVRGQ-----GYCPRQDQGTQGGWGNC 288 C S C P + GP C G GY + +GT+GG G+C Sbjct: 135 CSDSLKLCCPSGTFGPSCLPCPGGTERPCGGYGQCEGEGTRGGSGHC 181
>CREL1_MOUSE (Q91XD7) Cysteine-rich with EGF-like domain protein 1 precursor| Length = 420 Score = 29.6 bits (65), Expect = 3.8 Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 5/47 (10%) Frame = -3 Query: 413 CIHSWTYCTPGPSHGPCWSNCVRGQ-----GYCPRQDQGTQGGWGNC 288 C S C P + GP C G GY + +GT+GG G+C Sbjct: 135 CSDSLKLCCPSGTFGPSCLPCPGGTERPCGGYGQCEGEGTRGGSGHC 181
>CREL1_HUMAN (Q96HD1) Cysteine-rich with EGF-like domain protein 1 precursor| Length = 420 Score = 29.6 bits (65), Expect = 3.8 Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 5/47 (10%) Frame = -3 Query: 413 CIHSWTYCTPGPSHGPCWSNCVRGQ-----GYCPRQDQGTQGGWGNC 288 C S C P + GP C G GY + +GT+GG G+C Sbjct: 135 CSDSLKLCCPAGTFGPSCLPCPGGTERPCGGYGQCEGEGTRGGSGHC 181
>COATD_BPIF1 (O80298) Coat protein D| Length = 113 Score = 29.3 bits (64), Expect = 4.9 Identities = 13/25 (52%), Positives = 20/25 (80%) Frame = -2 Query: 141 TSVVPPSLAAELSYSVPFSFSSPCL 67 TSV+PP +A+ +SY VP + ++PCL Sbjct: 62 TSVLPPEIASAVSYVVPAN-AAPCL 85
>FMT_GEOSL (Q74GW4) Methionyl-tRNA formyltransferase (EC 2.1.2.9)| Length = 317 Score = 29.3 bits (64), Expect = 4.9 Identities = 11/29 (37%), Positives = 16/29 (55%) Frame = -1 Query: 439 ESKTEKPVVAFIAGLTAPPGRRMGHAGAI 353 E + P F+AG PG R+G AG++ Sbjct: 287 EGRKRLPTAEFLAGFRLEPGTRLGEAGSV 315
>ABCA2_HUMAN (Q9BZC7) ATP-binding cassette sub-family A member 2 (ATP-binding| cassette transporter 2) (ATP-binding cassette 2) Length = 2436 Score = 28.9 bits (63), Expect = 6.4 Identities = 34/120 (28%), Positives = 51/120 (42%), Gaps = 8/120 (6%) Frame = +3 Query: 93 GLSSSAQRPAMGALPTYCSLLTNEQQKEVSRCFLFYWTISSLYSTIPRCLKISNMVEPIL 272 G + + PA G+L +L + E + +R F S + + L +SN V P Sbjct: 1540 GATCVLKSPANGSLGPTLNLSSGESRLLAARFF-----DSMCLESFTQGLPLSNFVPPP- 1593 Query: 273 AGDSTTVTPASLSALILSWAVPLPPD------TIAPAWP--MRRPGGAVSPAMNATTGFS 428 + + +PAS + +W V LPP T AP+ P +R P A TGFS Sbjct: 1594 PSPAPSDSPASPDEDLQAWNVSLPPTAGPEMWTSAPSLPRLVREPVRCTCSAQG--TGFS 1651
>THIL_SYNP7 (Q54757) Thiamine-monophosphate kinase (EC 2.7.4.16)| (Thiamine-phosphate kinase) Length = 327 Score = 28.5 bits (62), Expect = 8.4 Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 1/74 (1%) Frame = +3 Query: 120 AMGALPTYCSL-LTNEQQKEVSRCFLFYWTISSLYSTIPRCLKISNMVEPILAGDSTTVT 296 AMGA P +L L + +S W + +Y + RCLK + P++ GD + Sbjct: 79 AMGATPAGITLALALPSDRRLS------W-LQQIYQGLDRCLKQYDC--PLIGGDLSRSP 129 Query: 297 PASLSALILSWAVP 338 A+L+ L W P Sbjct: 130 TATLAVTALGWVNP 143
>TIE2_MOUSE (Q02858) Angiopoietin-1 receptor precursor (EC 2.7.10.1)| (Tyrosine-protein kinase receptor TIE-2) (mTIE2) (Tyrosine-protein kinase receptor TEK) (p140 TEK) (Tunica interna endothelial cell kinase) (HYK) (STK1) (CD202b antigen) Length = 1122 Score = 28.5 bits (62), Expect = 8.4 Identities = 14/45 (31%), Positives = 24/45 (53%) Frame = +3 Query: 201 WTISSLYSTIPRCLKISNMVEPILAGDSTTVTPASLSALILSWAV 335 WT+S + P +KISN+ + T V S+S++I+ + V Sbjct: 631 WTLSDILPPQPENIKISNITDSTAMVSWTIVDGYSISSIIIRYKV 675
>PLXC1_HUMAN (O60486) Plexin-C1 precursor (Virus-encoded semaphorin protein| receptor) Length = 1568 Score = 28.5 bits (62), Expect = 8.4 Identities = 16/43 (37%), Positives = 20/43 (46%) Frame = -3 Query: 428 RKACRCIHSWTYCTPGPSHGPCWSNCVRGQGYCPRQDQGTQGG 300 + A RCIH +T C P S+ R Q CP + T GG Sbjct: 610 KSARRCIHPFTACDP--------SDYERNQEQCPVAVEKTSGG 644
>YFGA_ECOLI (P27434) Putative HTH-type transcriptional regulator yfgA| Length = 337 Score = 28.5 bits (62), Expect = 8.4 Identities = 16/47 (34%), Positives = 19/47 (40%) Frame = +3 Query: 255 MVEPILAGDSTTVTPASLSALILSWAVPLPPDTIAPAWPMRRPGGAV 395 +V P A T TPA +A A PLP D P+ P V Sbjct: 210 VVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALV 256
>RUMA_RALSO (Q8Y035) 23S rRNA (uracil-5-)-methyltransferase rumA (EC 2.1.1.-)| (23S rRNA(M-5-U1939)-methyltransferase) Length = 450 Score = 28.5 bits (62), Expect = 8.4 Identities = 14/60 (23%), Positives = 25/60 (41%) Frame = +3 Query: 246 ISNMVEPILAGDSTTVTPASLSALILSWAVPLPPDTIAPAWPMRRPGGAVSPAMNATTGF 425 + ++EP+ + D + + + W P PDT+ P +P+ R P T F Sbjct: 205 VLRILEPLTSADEAELRAFADRHAVQFWLQPKGPDTVYPFYPLDRALTYTLPEFGITMPF 264
>ANLN_HUMAN (Q9NQW6) Actin-binding protein anillin| Length = 1124 Score = 28.5 bits (62), Expect = 8.4 Identities = 27/123 (21%), Positives = 53/123 (43%), Gaps = 5/123 (4%) Frame = +3 Query: 87 KKGLSSSAQRPAMGALPTYCSLLTNEQQKEVSRCFLFYWTISSLYSTIPRCLKISNMVEP 266 ++GL+S + A ++ T L ++++ + SSL+S +P K ++ P Sbjct: 127 RRGLNSRLEATAASSVKTRMQKLAEQRRRWDNDDMTDDIPESSLFSPMPSEEKAASPPRP 186 Query: 267 ILAGDSTTVTP-----ASLSALILSWAVPLPPDTIAPAWPMRRPGGAVSPAMNATTGFSV 431 +L+ S T A+L+A I SW + +PG A ++ +G S Sbjct: 187 LLSNASATPVGRRGRLANLAATICSWEDDVNHSFAKQNSVQEQPGTACLSKFSSASGASA 246 Query: 432 LLS 440 ++ Sbjct: 247 RIN 249 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 69,022,933 Number of Sequences: 219361 Number of extensions: 1450859 Number of successful extensions: 5108 Number of sequences better than 10.0: 69 Number of HSP's better than 10.0 without gapping: 4915 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5106 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2851757076 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
