ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart35f01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ004857.1|HVAJ4857 Hordeum vulgare mRNA for hypothetical pr... 394 e-106
2gb|AY805122.1| Zea mays clone 5Zm6R25 putative protein kinase-li... 188 1e-44
3ref|NM_189334.1| Oryza sativa (japonica cultivar-group), predic... 178 1e-41
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 178 1e-41
5dbj|AP003238.4| Oryza sativa (japonica cultivar-group) genomic D... 178 1e-41
6dbj|AP004326.3| Oryza sativa (japonica cultivar-group) genomic D... 178 1e-41
7dbj|AK107370.1| Oryza sativa (japonica cultivar-group) cDNA clon... 178 1e-41
8dbj|AP002902.2| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
9dbj|AP002835.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
10gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 54 5e-04
11dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
12gb|AC119796.2| Oryza sativa (japonica cultivar-group) chromosome... 54 5e-04
13dbj|AP004253.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
14dbj|AP007204.2| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
15dbj|AP003934.4| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
16dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.44
17dbj|AP004692.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.44
18dbj|AK072227.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.44
19emb|CT009662.23| Mouse DNA sequence from clone CH29-511O15 on ch... 44 0.44
20gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 42 1.7
21gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 42 1.7
22ref|XM_478649.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.7
23gb|AC139042.18| Mus musculus chromosome 18, clone RP23-261C19, c... 42 1.7
24emb|Y00309.1|MMLDHAG Mouse LDH-A gene for lactate dehydrogenase-A 42 1.7
25emb|X03753.1|MMALDH1 Mouse LDH-A gene for lactate dehydrogenase ... 42 1.7
26gb|AC090123.68| Mus musculus strain C57BL/6J clone rp23-323l3 ma... 42 1.7
27dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
28gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 42 1.7
29dbj|AP004401.5| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
30dbj|AK101616.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.7
31dbj|AP005126.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
32dbj|AP001690.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 42 1.7
33gb|AC113953.6| Mus musculus chromosome 18, clone RP24-215C1, com... 42 1.7
34gb|U05674.1|RNU05674 Rattus norvegicus Sprague Dawley lactate de... 42 1.7
35dbj|AP000476.2| Homo sapiens genomic DNA, chromosome 21q21.2, cl... 42 1.7
36gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome 40 6.9
37gb|AC165357.4| Mus musculus BAC clone RP23-114G24 from chromosom... 40 6.9
38gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 6.9
39ref|XM_368674.1| Magnaporthe grisea 70-15 chromosome VI hypothet... 40 6.9
40gb|DQ145546.1| Sinorhizobium meliloti plasmid pSmeSM11a, complet... 40 6.9
41gb|AY659262.1| Synthetic construct Peudomonas aeruginosa clone F... 40 6.9
42gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 6.9
43gb|AC131719.5| Mus musculus BAC clone RP23-151H15 from chromosom... 40 6.9
44emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 6.9
45gb|AY157498.1| Synechococcus sp. PCC 7942 cosmid 4G8, complete s... 40 6.9
46gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 6.9
47emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 6.9
48emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete ... 40 6.9
49emb|AJ005522.1|HAA005522 Hippopotamus amphibius gene for pancrea... 40 6.9
50dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 6.9
51dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete g... 40 6.9
52gb|AC159021.2| Pan troglodytes BAC clone CH251-508C8 from chromo... 40 6.9
53gb|AC034228.6| Homo sapiens chromosome 5 clone CTD-2198K16, comp... 40 6.9
54gb|AC034216.5| Homo sapiens chromosome 5 clone CTD-2004C12, comp... 40 6.9
55gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 40 6.9
56dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
57gb|AC157482.2| Pan troglodytes BAC clone CH251-366D6 from chromo... 40 6.9
58dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 6.9
59gb|AE004729.1| Pseudomonas aeruginosa PAO1, section 290 of 529 o... 40 6.9
60gb|AE004674.1| Pseudomonas aeruginosa PAO1, section 235 of 529 o... 40 6.9
61dbj|AP004180.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
62emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 6.9
63emb|Z78016.1|CER186 Caenorhabditis elegans Cosmid R186, complete... 40 6.9
64gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 6.9
65gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 6.9
66gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 6.9
67gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 6.9
68gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 40 6.9
69gb|AC164567.5| Mus musculus BAC clone RP23-64B8 from chromosome ... 40 6.9
70gb|AC004511.1|AC004511 Homo sapiens chromosome 5, P1 clone 792C1... 40 6.9
71gb|AC158297.3| Mus musculus chromosome 7, clone RP24-336M17, com... 40 6.9
72gb|L37531.1|STMPGLYZ Streptomyces coelicolor bacteriophage (phiC... 40 6.9
73gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome 40 6.9 
>emb|AJ004857.1|HVAJ4857 Hordeum vulgare mRNA for hypothetical protein
          Length = 1225

 Score =  394 bits (199), Expect = e-106
 Identities = 266/290 (91%)
 Strand = Plus / Minus

                                                                        
Query: 85   ggagtaatcagatcctggctgactcggcctgcaccttgatgtgcatggtggagttgtagt 144
            ||||| ||||| ||||||   ||| ||||||||||||||||||||||||||| |||||||
Sbjct: 1035 ggagtcatcagttcctggtanacttggcctgcaccttgatgtgcatggtgganttgtagt 976

                                                                        
Query: 145  gcaccacctcgggccgcaccgtctgcatcgagaacacctccgactgcaggtagcagaacc 204
            ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct: 975  gcaccacctcgggccgcaccgtctgcatcganaacacctccgactgcaggtagcaggacc 916

                                                                        
Query: 205  cgtcgccggcgttggggccgtagtagaactgcgccgccgcgcacgcgcagtcgtccaggc 264
            |||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 915  cgtcgccggcgtcgcggccgtagtaaaactgcgccgccgcgcacgcgcagtcgtccaggc 856

                                                                        
Query: 265  acgccttcttgcacgcctcctcgcccacccgctccacggcccgcatgctcgtggcgtggt 324
            ||||| |||||||||||||||||| |||||||||||  |||||||||||||| | |||||
Sbjct: 855  acgccctcttgcacgcctcctcgctcacccgctccatcgcccgcatgctcgttgtgtggt 796

                                                              
Query: 325  cgttgaagtagcccgtgcccggcagcgacaccagccggtgctgcgcgcgc 374
            ||||||||||  |||||| || ||||||||| | ||||||||||||||||
Sbjct: 795  cgttgaagtacgccgtgctcgccagcgacacnanccggtgctgcgcgcgc 746



 Score =  137 bits (69), Expect = 4e-29
 Identities = 85/88 (96%), Gaps = 2/88 (2%)
 Strand = Plus / Minus

                                                                       
Query: 420 gtcgggacgcagccgcggttgggcctccggaagtccaccgcccggaagttggccgcgtcg 479
           |||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 706 gtcgggacnca-ccgcggttgggcctccggaa-tccaccgcccggaagttggccgcgtcg 649

                                       
Query: 480 gggcagctgcactgcgtgtcgtccgtgc 507
           ||||||||||||||||||||||||||||
Sbjct: 648 gggcagctgcactgcgtgtcgtccgtgc 621
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>gb|AY805122.1| Zea mays clone 5Zm6R25 putative protein kinase-like protein mRNA,
           partial cds
          Length = 239

 Score =  188 bits (95), Expect = 1e-44
 Identities = 152/171 (88%)
 Strand = Plus / Minus

                                                                       
Query: 110 ggcctgcaccttgatgtgcatggtggagttgtagtgcaccacctcgggccgcaccgtctg 169
           |||| |||||||||  ||||||||||||||||||||||||||||| ||| ||  ||||| 
Sbjct: 197 ggcccgcaccttgagatgcatggtggagttgtagtgcaccacctccggctgcgacgtctc 138

                                                                       
Query: 170 catcgagaacacctccgactgcaggtagcagaacccgtcgccggcgttggggccgtagta 229
           || ||| | |||||||||||||||||||||||| || |||||||||| || |||||||  
Sbjct: 137 cagcgacagcacctccgactgcaggtagcagaagccatcgccggcgtcggtgccgtagac 78

                                                              
Query: 230 gaactgcgccgccgcgcacgcgcagtcgtccaggcacgccttcttgcacgc 280
           |||||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct: 77  gaactgcgccgccgcgcaggcgcagtcgtccaggcacgccttcctgcacgc 27
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>ref|NM_189334.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1410

 Score =  178 bits (90), Expect = 1e-41
 Identities = 216/258 (83%)
 Strand = Plus / Minus

                                                                        
Query: 119  cttgatgtgcatggtggagttgtagtgcaccacctcgggccgcaccgtctgcatcgagaa 178
            |||||| ||||||| |||||||||||| | |||||| ||| ||| ||||| || ||| ||
Sbjct: 1359 cttgatatgcatggaggagttgtagtgaaacacctccggctgcatcgtctccagcgacaa 1300

                                                                        
Query: 179  cacctccgactgcaggtagcagaacccgtcgccggcgttggggccgtagtagaactgcgc 238
            |||||||||||||||||||||||| ||||||  || || |   |||||   |||||||||
Sbjct: 1299 cacctccgactgcaggtagcagaagccgtcgttggggtcgaatccgtacacgaactgcgc 1240

                                                                        
Query: 239  cgccgcgcacgcgcagtcgtccaggcacgccttcttgcacgcctcctcgcccacccgctc 298
            ||||  ||||||||||||| ||| ||||||   |||||||||| |||||||||||| |||
Sbjct: 1239 cgccatgcacgcgcagtcgcccaagcacgctgccttgcacgccgcctcgcccaccctctc 1180

                                                                        
Query: 299  cacggcccgcatgctcgtggcgtggtcgttgaagtagcccgtgcccggcagcgacaccag 358
            ||  | ||||||||| ||| |||||  |||||||||| ||||| |  |||||||||||||
Sbjct: 1179 cagcgtccgcatgctggtgtcgtggctgttgaagtaggccgtgtcgcgcagcgacaccag 1120

                              
Query: 359  ccggtgctgcgcgcgccg 376
            ||||||| ||||||||||
Sbjct: 1119 ccggtgccgcgcgcgccg 1102



 Score =  129 bits (65), Expect = 1e-26
 Identities = 77/81 (95%)
 Strand = Plus / Minus

                                                                        
Query: 419  cgtcgggacgcagccgcggttgggcctccggaagtccaccgcccggaagttggccgcgtc 478
            ||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||
Sbjct: 1068 cgtcgggacgcagccgcggttcggccgccggaagtccaccgcccggaagttggcggcgtc 1009

                                 
Query: 479  ggggcagctgcactgcgtgtc 499
            |||||||||||||||| ||||
Sbjct: 1008 ggggcagctgcactgcatgtc 988
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  178 bits (90), Expect = 1e-41
 Identities = 216/258 (83%)
 Strand = Plus / Minus

                                                                            
Query: 119      cttgatgtgcatggtggagttgtagtgcaccacctcgggccgcaccgtctgcatcgagaa 178
                |||||| ||||||| |||||||||||| | |||||| ||| ||| ||||| || ||| ||
Sbjct: 42232582 cttgatatgcatggaggagttgtagtgaaacacctccggctgcatcgtctccagcgacaa 42232523

                                                                            
Query: 179      cacctccgactgcaggtagcagaacccgtcgccggcgttggggccgtagtagaactgcgc 238
                |||||||||||||||||||||||| ||||||  || || |   |||||   |||||||||
Sbjct: 42232522 cacctccgactgcaggtagcagaagccgtcgttggggtcgaatccgtacacgaactgcgc 42232463

                                                                            
Query: 239      cgccgcgcacgcgcagtcgtccaggcacgccttcttgcacgcctcctcgcccacccgctc 298
                ||||  ||||||||||||| ||| ||||||   |||||||||| |||||||||||| |||
Sbjct: 42232462 cgccatgcacgcgcagtcgcccaagcacgctgccttgcacgccgcctcgcccaccctctc 42232403

                                                                            
Query: 299      cacggcccgcatgctcgtggcgtggtcgttgaagtagcccgtgcccggcagcgacaccag 358
                ||  | ||||||||| ||| |||||  |||||||||| ||||| |  |||||||||||||
Sbjct: 42232402 cagcgtccgcatgctggtgtcgtggctgttgaagtaggccgtgtcgcgcagcgacaccag 42232343

                                  
Query: 359      ccggtgctgcgcgcgccg 376
                ||||||| ||||||||||
Sbjct: 42232342 ccggtgccgcgcgcgccg 42232325



 Score =  129 bits (65), Expect = 1e-26
 Identities = 77/81 (95%)
 Strand = Plus / Minus

                                                                            
Query: 419      cgtcgggacgcagccgcggttgggcctccggaagtccaccgcccggaagttggccgcgtc 478
                ||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||
Sbjct: 42232291 cgtcgggacgcagccgcggttcggccgccggaagtccaccgcccggaagttggcggcgtc 42232232

                                     
Query: 479      ggggcagctgcactgcgtgtc 499
                |||||||||||||||| ||||
Sbjct: 42232231 ggggcagctgcactgcatgtc 42232211



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                   
Query: 448     ggaagtccaccgcccggaagttggccgcgtcggggcagctgcactgcgtgtc 499
               ||||||||||||||||||||||||| | ||| ||||||| | ||||| ||||
Sbjct: 6842978 ggaagtccaccgcccggaagttggcggagtcagggcagcagtactgcatgtc 6843029



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                                 
Query: 437      gttgggcctccggaagtccaccgcccggaagtt 469
                |||||||| ||||||||||||||||| ||||||
Sbjct: 11596786 gttgggccgccggaagtccaccgcccagaagtt 11596818
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>dbj|AP003238.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0401G10
          Length = 160704

 Score =  178 bits (90), Expect = 1e-41
 Identities = 216/258 (83%)
 Strand = Plus / Minus

                                                                        
Query: 119  cttgatgtgcatggtggagttgtagtgcaccacctcgggccgcaccgtctgcatcgagaa 178
            |||||| ||||||| |||||||||||| | |||||| ||| ||| ||||| || ||| ||
Sbjct: 4539 cttgatatgcatggaggagttgtagtgaaacacctccggctgcatcgtctccagcgacaa 4480

                                                                        
Query: 179  cacctccgactgcaggtagcagaacccgtcgccggcgttggggccgtagtagaactgcgc 238
            |||||||||||||||||||||||| ||||||  || || |   |||||   |||||||||
Sbjct: 4479 cacctccgactgcaggtagcagaagccgtcgttggggtcgaatccgtacacgaactgcgc 4420

                                                                        
Query: 239  cgccgcgcacgcgcagtcgtccaggcacgccttcttgcacgcctcctcgcccacccgctc 298
            ||||  ||||||||||||| ||| ||||||   |||||||||| |||||||||||| |||
Sbjct: 4419 cgccatgcacgcgcagtcgcccaagcacgctgccttgcacgccgcctcgcccaccctctc 4360

                                                                        
Query: 299  cacggcccgcatgctcgtggcgtggtcgttgaagtagcccgtgcccggcagcgacaccag 358
            ||  | ||||||||| ||| |||||  |||||||||| ||||| |  |||||||||||||
Sbjct: 4359 cagcgtccgcatgctggtgtcgtggctgttgaagtaggccgtgtcgcgcagcgacaccag 4300

                              
Query: 359  ccggtgctgcgcgcgccg 376
            ||||||| ||||||||||
Sbjct: 4299 ccggtgccgcgcgcgccg 4282



 Score =  129 bits (65), Expect = 1e-26
 Identities = 77/81 (95%)
 Strand = Plus / Minus

                                                                        
Query: 419  cgtcgggacgcagccgcggttgggcctccggaagtccaccgcccggaagttggccgcgtc 478
            ||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||
Sbjct: 4248 cgtcgggacgcagccgcggttcggccgccggaagtccaccgcccggaagttggcggcgtc 4189

                                 
Query: 479  ggggcagctgcactgcgtgtc 499
            |||||||||||||||| ||||
Sbjct: 4188 ggggcagctgcactgcatgtc 4168
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>dbj|AP004326.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OJ1294_F06
          Length = 121088

 Score =  178 bits (90), Expect = 1e-41
 Identities = 216/258 (83%)
 Strand = Plus / Minus

                                                                          
Query: 119    cttgatgtgcatggtggagttgtagtgcaccacctcgggccgcaccgtctgcatcgagaa 178
              |||||| ||||||| |||||||||||| | |||||| ||| ||| ||||| || ||| ||
Sbjct: 105780 cttgatatgcatggaggagttgtagtgaaacacctccggctgcatcgtctccagcgacaa 105721

                                                                          
Query: 179    cacctccgactgcaggtagcagaacccgtcgccggcgttggggccgtagtagaactgcgc 238
              |||||||||||||||||||||||| ||||||  || || |   |||||   |||||||||
Sbjct: 105720 cacctccgactgcaggtagcagaagccgtcgttggggtcgaatccgtacacgaactgcgc 105661

                                                                          
Query: 239    cgccgcgcacgcgcagtcgtccaggcacgccttcttgcacgcctcctcgcccacccgctc 298
              ||||  ||||||||||||| ||| ||||||   |||||||||| |||||||||||| |||
Sbjct: 105660 cgccatgcacgcgcagtcgcccaagcacgctgccttgcacgccgcctcgcccaccctctc 105601

                                                                          
Query: 299    cacggcccgcatgctcgtggcgtggtcgttgaagtagcccgtgcccggcagcgacaccag 358
              ||  | ||||||||| ||| |||||  |||||||||| ||||| |  |||||||||||||
Sbjct: 105600 cagcgtccgcatgctggtgtcgtggctgttgaagtaggccgtgtcgcgcagcgacaccag 105541

                                
Query: 359    ccggtgctgcgcgcgccg 376
              ||||||| ||||||||||
Sbjct: 105540 ccggtgccgcgcgcgccg 105523



 Score =  129 bits (65), Expect = 1e-26
 Identities = 77/81 (95%)
 Strand = Plus / Minus

                                                                          
Query: 419    cgtcgggacgcagccgcggttgggcctccggaagtccaccgcccggaagttggccgcgtc 478
              ||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||
Sbjct: 105489 cgtcgggacgcagccgcggttcggccgccggaagtccaccgcccggaagttggcggcgtc 105430

                                   
Query: 479    ggggcagctgcactgcgtgtc 499
              |||||||||||||||| ||||
Sbjct: 105429 ggggcagctgcactgcatgtc 105409
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>dbj|AK107370.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-B03, full
            insert sequence
          Length = 1610

 Score =  178 bits (90), Expect = 1e-41
 Identities = 216/258 (83%)
 Strand = Plus / Minus

                                                                        
Query: 119  cttgatgtgcatggtggagttgtagtgcaccacctcgggccgcaccgtctgcatcgagaa 178
            |||||| ||||||| |||||||||||| | |||||| ||| ||| ||||| || ||| ||
Sbjct: 1414 cttgatatgcatggaggagttgtagtgaaacacctccggctgcatcgtctccagcgacaa 1355

                                                                        
Query: 179  cacctccgactgcaggtagcagaacccgtcgccggcgttggggccgtagtagaactgcgc 238
            |||||||||||||||||||||||| ||||||  || || |   |||||   |||||||||
Sbjct: 1354 cacctccgactgcaggtagcagaagccgtcgttggggtcgaatccgtacacgaactgcgc 1295

                                                                        
Query: 239  cgccgcgcacgcgcagtcgtccaggcacgccttcttgcacgcctcctcgcccacccgctc 298
            ||||  ||||||||||||| ||| ||||||   |||||||||| |||||||||||| |||
Sbjct: 1294 cgccatgcacgcgcagtcgcccaagcacgctgccttgcacgccgcctcgcccaccctctc 1235

                                                                        
Query: 299  cacggcccgcatgctcgtggcgtggtcgttgaagtagcccgtgcccggcagcgacaccag 358
            ||  | ||||||||| ||| |||||  |||||||||| ||||| |  |||||||||||||
Sbjct: 1234 cagcgtccgcatgctggtgtcgtggctgttgaagtaggccgtgtcgcgcagcgacaccag 1175

                              
Query: 359  ccggtgctgcgcgcgccg 376
            ||||||| ||||||||||
Sbjct: 1174 ccggtgccgcgcgcgccg 1157



 Score =  129 bits (65), Expect = 1e-26
 Identities = 77/81 (95%)
 Strand = Plus / Minus

                                                                        
Query: 419  cgtcgggacgcagccgcggttgggcctccggaagtccaccgcccggaagttggccgcgtc 478
            ||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||
Sbjct: 1123 cgtcgggacgcagccgcggttcggccgccggaagtccaccgcccggaagttggcggcgtc 1064

                                 
Query: 479  ggggcagctgcactgcgtgtc 499
            |||||||||||||||| ||||
Sbjct: 1063 ggggcagctgcactgcatgtc 1043
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>dbj|AP002902.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0492F05
          Length = 159242

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                 
Query: 448   ggaagtccaccgcccggaagttggccgcgtcggggcagctgcactgcgtgtc 499
             ||||||||||||||||||||||||| | ||| ||||||| | ||||| ||||
Sbjct: 10702 ggaagtccaccgcccggaagttggcggagtcagggcagcagtactgcatgtc 10753
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>dbj|AP002835.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0417G05
          Length = 147803

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                  
Query: 448    ggaagtccaccgcccggaagttggccgcgtcggggcagctgcactgcgtgtc 499
              ||||||||||||||||||||||||| | ||| ||||||| | ||||| ||||
Sbjct: 125039 ggaagtccaccgcccggaagttggcggagtcagggcagcagtactgcatgtc 125090
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                          
Query: 448     ggaagtccaccgcccggaagttggccgcgtcggggcagctgca 490
               ||||||||||||||| |||||||||  |||||||||| |||||
Sbjct: 2473680 ggaagtccaccgcccagaagttggcaacgtcggggcaactgca 2473722
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                          
Query: 448     ggaagtccaccgcccggaagttggccgcgtcggggcagctgca 490
               ||||||||||||||| |||||||||  |||||||||| |||||
Sbjct: 2473790 ggaagtccaccgcccagaagttggcaacgtcggggcaactgca 2473832
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>gb|AC119796.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1172F09,
             complete sequence
          Length = 106057

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                        
Query: 448   ggaagtccaccgcccggaagttggccgcgtcggggcagctgca 490
             ||||||||||||||| |||||||||  |||||||||| |||||
Sbjct: 46176 ggaagtccaccgcccagaagttggcaacgtcggggcaactgca 46218
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>dbj|AP004253.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1116_C07
          Length = 108208

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                              
Query: 437   gttgggcctccggaagtccaccgcccggaagtt 469
             |||||||| ||||||||||||||||| ||||||
Sbjct: 50582 gttgggccgccggaagtccaccgcccagaagtt 50614
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>dbj|AP007204.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0008D05
          Length = 134776

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                               
Query: 437    gttgggcctccggaagtccaccgcccggaagtt 469
              |||||||| ||||||||||||||||| ||||||
Sbjct: 103793 gttgggccgccggaagtccaccgcccagaagtt 103825
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>dbj|AP003934.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0551A11
          Length = 132384

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                              
Query: 437   gttgggcctccggaagtccaccgcccggaagtt 469
             |||||||| ||||||||||||||||| ||||||
Sbjct: 35910 gttgggccgccggaagtccaccgcccagaagtt 35942
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 370     cgcgccgccccggcgacgacgaggag 395
               |||||||||||| |||||||||||||
Sbjct: 4679006 cgcgccgccccgccgacgacgaggag 4679031
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>dbj|AP004692.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0455A11
          Length = 158629

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 370   cgcgccgccccggcgacgacgaggag 395
             |||||||||||| |||||||||||||
Sbjct: 37022 cgcgccgccccgccgacgacgaggag 37047
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>dbj|AK072227.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013168G19, full
           insert sequence
          Length = 2470

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 370 cgcgccgccccggcgacgacgaggag 395
           |||||||||||| |||||||||||||
Sbjct: 93  cgcgccgccccgccgacgacgaggag 118
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>emb|CT009662.23| Mouse DNA sequence from clone CH29-511O15 on chromosome 17, complete
             sequence
          Length = 231197

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 235   gcgccgccgcgcacgcgcagtc 256
             ||||||||||||||||||||||
Sbjct: 29522 gcgccgccgcgcacgcgcagtc 29501
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>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 239     cgccgcgcacgcgcagtcgtc 259
               |||||||||||||||||||||
Sbjct: 2014248 cgccgcgcacgcgcagtcgtc 2014268
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 343     ccggcagcgacaccagccggt 363
               |||||||||||||||||||||
Sbjct: 2899625 ccggcagcgacaccagccggt 2899645



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 332     gtagcccgtgcccggcagcg 351
               ||||||||||||||||||||
Sbjct: 2372421 gtagcccgtgcccggcagcg 2372440
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>ref|XM_478649.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3237

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 239  cgccgcgcacgcgcagtcgtccaggcacgccttcttgcacg 279
            |||| |||||| ||||| | ||||||||||||||| |||||
Sbjct: 1388 cgccccgcacgagcagttgcccaggcacgccttctcgcacg 1348
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>gb|AC139042.18| Mus musculus chromosome 18, clone RP23-261C19, complete sequence
          Length = 195202

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 75    gctcagggtgggagtaatcag 95
             |||||||||||||||||||||
Sbjct: 30282 gctcagggtgggagtaatcag 30262
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>emb|Y00309.1|MMLDHAG Mouse LDH-A gene for lactate dehydrogenase-A
          Length = 12851

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 362  gtgctgcgcgcgccgccccgg 382
            |||||||||||||||||||||
Sbjct: 2548 gtgctgcgcgcgccgccccgg 2568
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>emb|X03753.1|MMALDH1 Mouse LDH-A gene for lactate dehydrogenase A (exons 1-2)
          Length = 3157

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 362 gtgctgcgcgcgccgccccgg 382
           |||||||||||||||||||||
Sbjct: 969 gtgctgcgcgcgccgccccgg 989
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>gb|AC090123.68| Mus musculus strain C57BL/6J clone rp23-323l3 map 7, complete sequence
          Length = 223438

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 362    gtgctgcgcgcgccgccccgg 382
              |||||||||||||||||||||
Sbjct: 131735 gtgctgcgcgcgccgccccgg 131715
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                         
Query: 239      cgccgcgcacgcgcagtcgtccaggcacgccttcttgcacg 279
                |||| |||||| ||||| | ||||||||||||||| |||||
Sbjct: 21813389 cgccccgcacgagcagttgcccaggcacgccttctcgcacg 21813429
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>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 339     gtgcccggcagcgacaccagc 359
               |||||||||||||||||||||
Sbjct: 1396742 gtgcccggcagcgacaccagc 1396722



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 290    cacccgctccacggcccgca 309
              ||||||||||||||||||||
Sbjct: 663807 cacccgctccacggcccgca 663826
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>dbj|AP004401.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0534A03
          Length = 153170

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                       
Query: 239    cgccgcgcacgcgcagtcgtccaggcacgccttcttgcacg 279
              |||| |||||| ||||| | ||||||||||||||| |||||
Sbjct: 130572 cgccccgcacgagcagttgcccaggcacgccttctcgcacg 130612
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>dbj|AK101616.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033052G09, full
            insert sequence
          Length = 3238

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 239  cgccgcgcacgcgcagtcgtccaggcacgccttcttgcacg 279
            |||| |||||| ||||| | ||||||||||||||| |||||
Sbjct: 1389 cgccccgcacgagcagttgcccaggcacgccttctcgcacg 1349
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>dbj|AP005126.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0041B22
          Length = 142446

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 239   cgccgcgcacgcgcagtcgtccaggcacgccttcttgcacg 279
             |||| |||||| ||||| | ||||||||||||||| |||||
Sbjct: 27065 cgccccgcacgagcagttgcccaggcacgccttctcgcacg 27105
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>dbj|AP001690.1| Homo sapiens genomic DNA, chromosome 21q, section 34/105
          Length = 340000

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 21     ctcatggtcaactttggaatt 41
              |||||||||||||||||||||
Sbjct: 326230 ctcatggtcaactttggaatt 326210
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>gb|AC113953.6| Mus musculus chromosome 18, clone RP24-215C1, complete sequence
          Length = 201174

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 75   gctcagggtgggagtaatcag 95
            |||||||||||||||||||||
Sbjct: 2047 gctcagggtgggagtaatcag 2067
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>gb|U05674.1|RNU05674 Rattus norvegicus Sprague Dawley lactate dehydrogenase A subunit
            gene, promoter region
          Length = 1192

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 362  gtgctgcgcgcgccgccccgg 382
            |||||||||||||||||||||
Sbjct: 1021 gtgctgcgcgcgccgccccgg 1041
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>dbj|AP000476.2| Homo sapiens genomic DNA, chromosome 21q21.2, clone:B86D9, LL56-APP
              region, complete sequence
          Length = 171452

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 21     ctcatggtcaactttggaatt 41
              |||||||||||||||||||||
Sbjct: 161611 ctcatggtcaactttggaatt 161591
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>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome
          Length = 2364842

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 382    gcgacgacgaggagccgcac 401
              ||||||||||||||||||||
Sbjct: 627205 gcgacgacgaggagccgcac 627224
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>gb|AC165357.4| Mus musculus BAC clone RP23-114G24 from chromosome 10, complete
             sequence
          Length = 216816

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    tttggaatttcaacatatat 52
             ||||||||||||||||||||
Sbjct: 12344 tttggaatttcaacatatat 12363
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 332     gtagcccgtgcccggcagcg 351
               ||||||||||||||||||||
Sbjct: 1603626 gtagcccgtgcccggcagcg 1603645
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>ref|XM_368674.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein
           (MG00570.4) partial mRNA
          Length = 1029

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 336 cccgtgcccggcagcgacac 355
           ||||||||||||||||||||
Sbjct: 658 cccgtgcccggcagcgacac 677
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>gb|DQ145546.1| Sinorhizobium meliloti plasmid pSmeSM11a, complete sequence
          Length = 144170

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 100   tggctgactcggcctgcacc 119
             ||||||||||||||||||||
Sbjct: 41028 tggctgactcggcctgcacc 41047
to top
>gb|AY659262.1| Synthetic construct Peudomonas aeruginosa clone FLH041912.01F
           PA2467 gene, partial cds
          Length = 987

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 389 cgaggagccgcacgccgtcggcgg 412
           ||||| ||||||||||||||||||
Sbjct: 730 cgaggcgccgcacgccgtcggcgg 707
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 332     gtagcccgtgcccggcagcg 351
               ||||||||||||||||||||
Sbjct: 2850266 gtagcccgtgcccggcagcg 2850285
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>gb|AC131719.5| Mus musculus BAC clone RP23-151H15 from chromosome 19, complete sequence
          Length = 216902

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 238    ccgccgcgcacgcgcagtcg 257
              ||||||||||||||||||||
Sbjct: 113816 ccgccgcgcacgcgcagtcg 113835
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 346     gcagcgacaccagccggtgctgcgcgcg 373
               |||||||||||||| ||||| |||||||
Sbjct: 4967797 gcagcgacaccagcaggtgcggcgcgcg 4967770
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>gb|AY157498.1| Synechococcus sp. PCC 7942 cosmid 4G8, complete sequence
          Length = 31404

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 349   gcgacaccagccggtgctgc 368
             ||||||||||||||||||||
Sbjct: 12009 gcgacaccagccggtgctgc 12028
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 332     gtagcccgtgcccggcagcg 351
               ||||||||||||||||||||
Sbjct: 3037393 gtagcccgtgcccggcagcg 3037412
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 332     gtagcccgtgcccggcagcg 351
               ||||||||||||||||||||
Sbjct: 2580446 gtagcccgtgcccggcagcg 2580465
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>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29
          Length = 296500

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 370    cgcgccgccccggcgacgac 389
              ||||||||||||||||||||
Sbjct: 197401 cgcgccgccccggcgacgac 197420
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>emb|AJ005522.1|HAA005522 Hippopotamus amphibius gene for pancreatic ribonuclease
          Length = 348

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 121 tgatgtgcatggtggagttg 140
           ||||||||||||||||||||
Sbjct: 244 tgatgtgcatggtggagttg 225
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 346     gcagcgacaccagccggtgctgcgcgcg 373
               |||||||||||||| ||||| |||||||
Sbjct: 4688174 gcagcgacaccagcaggtgcggcgcgcg 4688147
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>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome
          Length = 2696255

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 349     gcgacaccagccggtgctgc 368
               ||||||||||||||||||||
Sbjct: 2416439 gcgacaccagccggtgctgc 2416458
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>gb|AC159021.2| Pan troglodytes BAC clone CH251-508C8 from chromosome unknown, complete
              sequence
          Length = 240827

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 121    tgatgtgcatggtggagttg 140
              ||||||||||||||||||||
Sbjct: 142010 tgatgtgcatggtggagttg 142029
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>gb|AC034228.6| Homo sapiens chromosome 5 clone CTD-2198K16, complete sequence
          Length = 183378

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 121  tgatgtgcatggtggagttg 140
            ||||||||||||||||||||
Sbjct: 9598 tgatgtgcatggtggagttg 9579
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>gb|AC034216.5| Homo sapiens chromosome 5 clone CTD-2004C12, complete sequence
          Length = 178405

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   tgatgtgcatggtggagttg 140
             ||||||||||||||||||||
Sbjct: 72808 tgatgtgcatggtggagttg 72789
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 235     gcgccgccgcgcacgcgcag 254
               ||||||||||||||||||||
Sbjct: 2170552 gcgccgccgcgcacgcgcag 2170533
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 367      gcgcgcgccgccccggcgacgacg 390
                |||||||||||| |||||||||||
Sbjct: 14016235 gcgcgcgccgccgcggcgacgacg 14016258
to top
>gb|AC157482.2| Pan troglodytes BAC clone CH251-366D6 from chromosome unknown, complete
              sequence
          Length = 168325

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 121    tgatgtgcatggtggagttg 140
              ||||||||||||||||||||
Sbjct: 144384 tgatgtgcatggtggagttg 144365
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 370     cgcgccgccccggcgacgac 389
               ||||||||||||||||||||
Sbjct: 5820936 cgcgccgccccggcgacgac 5820955



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 476     gtcggggcagctgcactgcg 495
               ||||||||||||||||||||
Sbjct: 2413845 gtcggggcagctgcactgcg 2413864



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 385     acgacgaggagccgcacgccgtcg 408
               |||||||||||||||||| |||||
Sbjct: 1882236 acgacgaggagccgcacgacgtcg 1882213
to top
>gb|AE004729.1| Pseudomonas aeruginosa PAO1, section 290 of 529 of the complete genome
          Length = 12189

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 361   ggtgctgcgcgcgccgcccc 380
             ||||||||||||||||||||
Sbjct: 10160 ggtgctgcgcgcgccgcccc 10179
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>gb|AE004674.1| Pseudomonas aeruginosa PAO1, section 235 of 529 of the complete
            genome
          Length = 11021

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 389  cgaggagccgcacgccgtcggcgg 412
            ||||| ||||||||||||||||||
Sbjct: 6797 cgaggcgccgcacgccgtcggcgg 6820
to top
>dbj|AP004180.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1126_B05
          Length = 117057

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 367   gcgcgcgccgccccggcgacgacg 390
             |||||||||||| |||||||||||
Sbjct: 85873 gcgcgcgccgccgcggcgacgacg 85896
to top
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 360     cggtgctgcgcgcgccgccc 379
               ||||||||||||||||||||
Sbjct: 3267717 cggtgctgcgcgcgccgccc 3267736
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>emb|Z78016.1|CER186 Caenorhabditis elegans Cosmid R186, complete sequence
          Length = 29134

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 28   tcaactttggaatttcaaca 47
            ||||||||||||||||||||
Sbjct: 7681 tcaactttggaatttcaaca 7700
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 346     gcagcgacaccagccggtgctgcgcgcg 373
               |||||||||||||| ||||| |||||||
Sbjct: 4692153 gcagcgacaccagcaggtgcggcgcgcg 4692126
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 383     cgacgacgaggagccgcacg 402
               ||||||||||||||||||||
Sbjct: 1286626 cgacgacgaggagccgcacg 1286645
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 332     gtagcccgtgcccggcagcg 351
               ||||||||||||||||||||
Sbjct: 2308469 gtagcccgtgcccggcagcg 2308450
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 145     gcaccacctcgggccgcacc 164
               ||||||||||||||||||||
Sbjct: 2418982 gcaccacctcgggccgcacc 2419001
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 401     cgccgtcggcggtggactcg 420
               ||||||||||||||||||||
Sbjct: 2532167 cgccgtcggcggtggactcg 2532186
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>gb|AC164567.5| Mus musculus BAC clone RP23-64B8 from chromosome 10, complete sequence
          Length = 262262

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    tttggaatttcaacatatat 52
             ||||||||||||||||||||
Sbjct: 31693 tttggaatttcaacatatat 31674
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>gb|AC004511.1|AC004511 Homo sapiens chromosome 5, P1 clone 792C12 (LBNL H22), complete
             sequence
          Length = 45005

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 121   tgatgtgcatggtggagttg 140
             ||||||||||||||||||||
Sbjct: 12645 tgatgtgcatggtggagttg 12664
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>gb|AC158297.3| Mus musculus chromosome 7, clone RP24-336M17, complete sequence
          Length = 196548

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 40     tttcaacatatatgccatag 59
              ||||||||||||||||||||
Sbjct: 149406 tttcaacatatatgccatag 149425
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>gb|L37531.1|STMPGLYZ Streptomyces coelicolor bacteriophage (phiC31) resistance (pglY and
            pglZ) genes, complete cds's
          Length = 9461

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 370  cgcgccgccccggcgacgac 389
            ||||||||||||||||||||
Sbjct: 5088 cgcgccgccccggcgacgac 5107
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>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome
          Length = 2695903

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 349     gcgacaccagccggtgctgc 368
               ||||||||||||||||||||
Sbjct: 1900611 gcgacaccagccggtgctgc 1900592


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,579,253
Number of Sequences: 3902068
Number of extensions: 3579253
Number of successful extensions: 78899
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75359
Number of HSP's gapped (non-prelim): 3539
length of query: 507
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 485
effective length of database: 17,147,199,772
effective search space: 8316391889420
effective search space used: 8316391889420
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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