>ALR_FUSNN (Q8RGA2) Alanine racemase (EC 5.1.1.1)|
          Length = 354

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 16/35 (45%), Positives = 21/35 (60%)
 Frame = +2

Query: 86  DHNTVATKNITLDQMTDTPIIQRQLNCEPKNISSS 190
           D NT+ TKN TL+Q+     I   LN E  +IS+S
Sbjct: 160 DGNTIETKNFTLEQIEKFKKIVNSLNLEYIHISNS 194

>TOP1_XENLA (P41512) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)|
          Length = 829

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 18/57 (31%), Positives = 24/57 (42%)
 Frame = +1

Query: 19  HSTVHPNLLHHRNSWDTTKHNARPQHSSNEKHNARPDDGHADNSKTAKL*AQKHKQL 189
           H   H N   HR   D  KH  R      EKH  +  + H D  K  +   +KHK++
Sbjct: 59  HKDKHKNNDKHREK-DGEKHRER----DGEKHRDKNGEKHRDGEKHKEKDIEKHKEV 110

>CYTSA_CHICK (Q2KN97) Cytospin-A|
          Length = 1118

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 15/66 (22%), Positives = 29/66 (43%)
 Frame = +2

Query: 41  CCTTEIHGTQPNITLDHNTVATKNITLDQMTDTPIIQRQLNCEPKNISSSMAKHLQATTE 220
           C T  IH  + N    H+T      TL ++ D   I ++LN E + +       +++  +
Sbjct: 396 CLTERIHQMEEN---QHSTAEELQATLQELADLQQITQELNSENERLGEEKVILMESLCQ 452

Query: 221 AEHQVE 238
              ++E
Sbjct: 453 QSDKLE 458

>CSF1_YEAST (Q12150) Protein CSF1 (Cold sensitive for fermentation protein 1)|
          Length = 2958

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 16/72 (22%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
 Frame = +2

Query: 44  CTTEIHGTQPNI--TLDHNTVATKNITLDQMTDTPIIQRQLNCEPKNISSSMAKHLQATT 217
           C   +HG + +I  T+   ++      +     TP+ +  LN  P N  +   KH +   
Sbjct: 661 CYLSLHGDKLSIDVTVPRESILGTYTDMSYEISTPMFRMMLNTPPWNTLNEFMKHKEVGR 720

Query: 218 EAEHQVEGRLLL 253
             +  ++G  LL
Sbjct: 721 AYDFTIKGSYLL 732

>HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor|
          Length = 351

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = +1

Query: 10  LFIHSTVHPNLLHHRNSWDTTKHNARPQHSSNEKHNARPDDGH 138
           + +  TVHP  LH  +     + +  P H   E H+  P++ H
Sbjct: 46  VLVEDTVHPEHLHEEHHHHHPEEHHEPHH--EEHHHHHPEEHH 86


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,513,851
Number of Sequences: 219361
Number of extensions: 392654
Number of successful extensions: 1422
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1412
length of database: 80,573,946
effective HSP length: 63
effective length of database: 66,754,203
effective search space used: 1602100872
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)