ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart35e10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1RGS19_RAT (O70521) Regulator of G-protein signaling 19 (RGS19) (... 29 6.9
2RGS19_MOUSE (Q9CX84) Regulator of G-protein signaling 19 (RGS19) 29 6.9
3YIJF_ECOLI (P32668) Hypothetical protein yijF precursor 29 9.0
4SCR11_ARATH (P82630) Hypothetical protein SCRL11 precursor 29 9.0

>RGS19_RAT (O70521) Regulator of G-protein signaling 19 (RGS19)|
           (G-alpha-interacting protein) (GAIP protein)
          Length = 216

 Score = 29.3 bits (64), Expect = 6.9
 Identities = 14/44 (31%), Positives = 18/44 (40%)
 Frame = -3

Query: 418 ADEPPWTNTTNPCPSEGPSTGHCTELATPSRAV*CWCLCGNIHW 287
           AD PP  ++ +  PS  PS   C           CWC C +  W
Sbjct: 17  ADRPPSMSSHDAAPSGPPSRNPCCL---------CWCCCCSCSW 51



to top

>RGS19_MOUSE (Q9CX84) Regulator of G-protein signaling 19 (RGS19)|
          Length = 216

 Score = 29.3 bits (64), Expect = 6.9
 Identities = 14/44 (31%), Positives = 18/44 (40%)
 Frame = -3

Query: 418 ADEPPWTNTTNPCPSEGPSTGHCTELATPSRAV*CWCLCGNIHW 287
           AD PP  ++ +  PS  PS   C           CWC C +  W
Sbjct: 17  ADRPPSMSSHDAAPSGPPSRNPCCL---------CWCCCCSCSW 51



to top

>YIJF_ECOLI (P32668) Hypothetical protein yijF precursor|
          Length = 205

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = -1

Query: 411 NRLGQTPPTHVRPKGHQRAIAPSWRRLQGLYNVGVCVATFIGTGAFLFIY 262
           +R  +T PT   P  +Q     SWR   GL ++GV    F   G  L I+
Sbjct: 130 SRHDKTRPTSKNPSDYQAGDIVSWRLDNGLAHIGVVSDGFARDGTPLVIH 179



to top

>SCR11_ARATH (P82630) Hypothetical protein SCRL11 precursor|
          Length = 86

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 17/51 (33%), Positives = 23/51 (45%)
 Frame = -3

Query: 481 MLGPSGLLQNCVSTILLGVYFADEPPWTNTTNPCPSEGPSTGHCTELATPS 329
           M G + LL +C+    L    A E  W      CPS+    G CT+  +PS
Sbjct: 1   MKGIAMLLVSCLLFSFLSTNLAKELKW------CPSKDVFNGSCTDTGSPS 45


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,410,709
Number of Sequences: 219361
Number of extensions: 1757656
Number of successful extensions: 4065
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4065
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3985467738
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top