ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart35e10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC093661.4| Homo sapiens BAC clone RP11-472K22 from 4, comple... 46 0.11
2gb|AC102749.10| Mus musculus chromosome 5, clone RP24-478I4, com... 44 0.45
3gb|AC102717.11| Mus musculus chromosome 5, clone RP24-576B5, com... 44 0.45
4gb|AC073886.4| Homo sapiens BAC clone RP11-101N13 from 7, comple... 44 0.45
5gb|AC016343.5| Homo sapiens chromosome 15, clone RP11-142M4, com... 44 0.45
6gb|AC146077.4| Pan troglodytes BAC clone RP43-45A15 from chromos... 44 0.45
7gb|AC018877.5| Homo sapiens BAC clone RP11-295K1 from 2, complet... 44 0.45
8gb|AC051643.5| Homo sapiens chromosome 15, clone RP11-615L8, com... 44 0.45
9gb|AC140301.3| Mus musculus BAC clone RP23-435M8 from 5, complet... 44 0.45
10gb|AC129580.14| Mus musculus chromosome 14, clone RP24-149P3, co... 42 1.8
11gb|AC073939.6| Mus musculus strain C57BL/6J chromosome 12 clone ... 42 1.8
12gb|AC025905.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.8
13gb|AC113559.3| Homo sapiens chromosome 18, clone RP11-114J15, co... 42 1.8
14gb|AC083760.5| Homo sapiens chromosome 18, clone CTD-388D15, com... 42 1.8
15emb|BX323448.7| Zebrafish DNA sequence from clone CH211-145B13 i... 42 1.8
16gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete g... 42 1.8
17dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
18gb|AY945934.1| Homo sapiens solute carrier organic anion transpo... 42 1.8
19tpe|BN000872.1| TPA: TPA_exp: Mus musculus immunoglobulin heavy ... 42 1.8
20gb|AC163348.5| Mus musculus BAC clone RP23-230L2 from chromosome... 42 1.8
21gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.8
22emb|AL683881.12| Mouse DNA sequence from clone RP23-10M6 on chro... 42 1.8
23gb|AC022335.8| Homo sapiens 12p BAC RP11-125O5 (Rosewell Park Ca... 42 1.8
24gb|AC154026.1| Mus musculus 6 NOVECTOR RP24-423A5 (Roswell Park ... 40 7.1
25gb|AC138680.7| Mus musculus chromosome 1, clone RP23-373D7, comp... 40 7.1
26ref|XM_630477.1| Dictyostelium discoideum hypothetical protein (... 40 7.1
27gb|AC166050.3| Mus musculus BAC clone RP24-138A17 from chromosom... 40 7.1
28gb|AE001430.2| Plasmodium falciparum 3D7 chromosome 2 section 67... 40 7.1
29gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-... 40 7.1
30gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete... 40 7.1
31gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome 40 7.1
32gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 7.1
33emb|CR628410.11| Zebrafish DNA sequence from clone CH211-198D23 ... 40 7.1
34gb|AC146047.2| Pan troglodytes BAC clone RP43-15P9 from 7, compl... 40 7.1
35gb|AC146213.2| Pan troglodytes BAC clone RP43-33O10 from 7, comp... 40 7.1
36gb|AC124006.4| Mus musculus BAC clone RP24-528C3 from chromosome... 40 7.1
37gb|AC123861.4| Mus musculus BAC clone RP23-351E20 from chromosom... 40 7.1
38gb|AC123555.4| Mus musculus BAC clone RP23-139L20 from 1, comple... 40 7.1
39gb|AC084384.1| Mus musculus BAC clone RP23-24F24 from 15, comple... 40 7.1
40gb|AC121854.2| Mus musculus BAC clone RP24-97A15 from 7, complet... 40 7.1
41gb|CP000001.1| Bacillus cereus E33L, complete genome 40 7.1
42emb|BX901893.12| Zebrafish DNA sequence from clone CH211-72G23 i... 40 7.1
43emb|AL136128.9| Human DNA sequence from clone RP1-84N20 on chrom... 40 7.1
44gb|AC099673.2| Homo sapiens chromosome 1 clone RP11-109H10, comp... 40 7.1
45gb|AC104569.7| Homo sapiens chromosome 15, clone RP11-147D1, com... 40 7.1
46gb|AC116350.2| Homo sapiens chromosome 5 clone RP11-357F12, comp... 40 7.1
47gb|AC097520.2| Homo sapiens BAC clone RP11-562F9 from 4, complet... 40 7.1
48gb|AC079633.9|AC079633 Genomic Sequence for Oryza sativa, Nippon... 40 7.1
49gb|AC132568.3| Mus musculus BAC clone RP24-484M20 from chromosom... 40 7.1
50emb|AL844567.22| Zebrafish DNA sequence from clone DKEY-77D17 in... 40 7.1
51dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
52gb|AC125471.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.1
53gb|AC135999.4| Homo sapiens chromosome 15, clone RP13-911E13, co... 40 7.1
54emb|AL929064.11| Mouse DNA sequence from clone RP23-442A7 on chr... 40 7.1
55emb|BX649419.6| Zebrafish DNA sequence from clone CH211-106J5 in... 40 7.1
56gb|AC110041.13| Mus musculus chromosome 8, clone RP23-276O15, co... 40 7.1
57gb|AC160539.11| Mus musculus chromosome 15, clone RP24-163H9, co... 40 7.1
58gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome 40 7.1
59gb|AE016879.1| Bacillus anthracis str. Ames, complete genome 40 7.1
60gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome 40 7.1
61emb|BX000993.6| Zebrafish DNA sequence from clone DKEY-88I22 in ... 40 7.1
62gb|AC144944.5| Mus musculus BAC clone RP23-328K6 from 8, complet... 40 7.1
63emb|CT025678.6| Mouse DNA sequence from clone RP24-153A6 on chro... 40 7.1
64gb|AC132241.3| Mus musculus BAC clone RP24-413I2 from chromosome... 40 7.1
65emb|AL806531.12| Mouse DNA sequence from clone RP23-188K22 on ch... 40 7.1
66emb|AL671991.5| Mouse DNA sequence from clone RP23-343L7 on chro... 40 7.1
67emb|AL929046.9| Mouse DNA sequence from clone RP23-308N4 on chro... 40 7.1
68dbj|AP003465.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 7.1 
>gb|AC093661.4| Homo sapiens BAC clone RP11-472K22 from 4, complete sequence
          Length = 152381

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 256   atatatgtaaataaacagaaatg 278
             |||||||||||||||||||||||
Sbjct: 63716 atatatgtaaataaacagaaatg 63694
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>gb|AC102749.10| Mus musculus chromosome 5, clone RP24-478I4, complete sequence
          Length = 173437

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 247    attattcatatatatgtaaata 268
              ||||||||||||||||||||||
Sbjct: 171800 attattcatatatatgtaaata 171779
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>gb|AC102717.11| Mus musculus chromosome 5, clone RP24-576B5, complete sequence
          Length = 161299

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 247    attattcatatatatgtaaata 268
              ||||||||||||||||||||||
Sbjct: 131954 attattcatatatatgtaaata 131975
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>gb|AC073886.4| Homo sapiens BAC clone RP11-101N13 from 7, complete sequence
          Length = 112568

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 249   tattcatatatatgtaaataaa 270
             ||||||||||||||||||||||
Sbjct: 97370 tattcatatatatgtaaataaa 97391
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>gb|AC016343.5| Homo sapiens chromosome 15, clone RP11-142M4, complete sequence
          Length = 177386

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 254   atatatatgtaaataaacagaa 275
             ||||||||||||||||||||||
Sbjct: 43715 atatatatgtaaataaacagaa 43694
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>gb|AC146077.4| Pan troglodytes BAC clone RP43-45A15 from chromosome 7, complete
            sequence
          Length = 188174

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 249  tattcatatatatgtaaataaa 270
            ||||||||||||||||||||||
Sbjct: 2213 tattcatatatatgtaaataaa 2192
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>gb|AC018877.5| Homo sapiens BAC clone RP11-295K1 from 2, complete sequence
          Length = 83556

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 226   aggacaaatatttacattcaca 247
             ||||||||||||||||||||||
Sbjct: 41665 aggacaaatatttacattcaca 41644
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>gb|AC051643.5| Homo sapiens chromosome 15, clone RP11-615L8, complete sequence
          Length = 158682

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 254    atatatatgtaaataaacagaa 275
              ||||||||||||||||||||||
Sbjct: 148735 atatatatgtaaataaacagaa 148714
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>gb|AC140301.3| Mus musculus BAC clone RP23-435M8 from 5, complete sequence
          Length = 197633

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 249    tattcatatatatgtaaataaa 270
              ||||||||||||||||||||||
Sbjct: 155975 tattcatatatatgtaaataaa 155996
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>gb|AC129580.14| Mus musculus chromosome 14, clone RP24-149P3, complete sequence
          Length = 185100

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 248   ttattcatatatatgtaaata 268
             |||||||||||||||||||||
Sbjct: 97404 ttattcatatatatgtaaata 97384
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>gb|AC073939.6| Mus musculus strain C57BL/6J chromosome 12 clone RP23-218B2, complete
             sequence
          Length = 195281

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 241   attcacattattcatatatat 261
             |||||||||||||||||||||
Sbjct: 55212 attcacattattcatatatat 55192
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>gb|AC025905.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0018F16,
             complete sequence
          Length = 179157

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 250   attcatatatatgtaaataaa 270
             |||||||||||||||||||||
Sbjct: 48235 attcatatatatgtaaataaa 48215
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>gb|AC113559.3| Homo sapiens chromosome 18, clone RP11-114J15, complete sequence
          Length = 145274

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 249   tattcatatatatgtaaataaacag 273
             |||| ||||||||||||||||||||
Sbjct: 55402 tatttatatatatgtaaataaacag 55426



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 254   atatatatgtaaataaacag 273
             ||||||||||||||||||||
Sbjct: 55435 atatatatgtaaataaacag 55454
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>gb|AC083760.5| Homo sapiens chromosome 18, clone CTD-388D15, complete sequence
          Length = 109851

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 249  tattcatatatatgtaaataaacag 273
            |||| ||||||||||||||||||||
Sbjct: 7424 tatttatatatatgtaaataaacag 7400



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 254  atatatatgtaaataaacag 273
            ||||||||||||||||||||
Sbjct: 7391 atatatatgtaaataaacag 7372
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>emb|BX323448.7| Zebrafish DNA sequence from clone CH211-145B13 in linkage group 1,
            complete sequence
          Length = 150073

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 46   tattattttactctgacagtg 66
            |||||||||||||||||||||
Sbjct: 8246 tattattttactctgacagtg 8226
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>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome
          Length = 6260361

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 486     atcaccattgaggaatataaa 506
               |||||||||||||||||||||
Sbjct: 4827307 atcaccattgaggaatataaa 4827287
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 250      attcatatatatgtaaataaa 270
                |||||||||||||||||||||
Sbjct: 16169346 attcatatatatgtaaataaa 16169326
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>gb|AY945934.1| Homo sapiens solute carrier organic anion transporter family, member
             1B1 (SLCO1B1) gene, complete cds
          Length = 112510

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 247   attattcatatatatgtaaat 267
             |||||||||||||||||||||
Sbjct: 29787 attattcatatatatgtaaat 29767
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>tpe|BN000872.1| TPA: TPA_exp: Mus musculus immunoglobulin heavy chain variable region
              locus, strain C57BL/6
          Length = 2500000

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 241    attcacattattcatatatat 261
              |||||||||||||||||||||
Sbjct: 465035 attcacattattcatatatat 465015
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>gb|AC163348.5| Mus musculus BAC clone RP23-230L2 from chromosome 12, complete sequence
          Length = 233932

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 241    attcacattattcatatatat 261
              |||||||||||||||||||||
Sbjct: 167043 attcacattattcatatatat 167023
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 250      attcatatatatgtaaataaa 270
                |||||||||||||||||||||
Sbjct: 16177587 attcatatatatgtaaataaa 16177567
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>emb|AL683881.12| Mouse DNA sequence from clone RP23-10M6 on chromosome 2, complete
             sequence
          Length = 155168

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 217   atgctgttaaggacaaatatt 237
             |||||||||||||||||||||
Sbjct: 51394 atgctgttaaggacaaatatt 51414
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>gb|AC022335.8| Homo sapiens 12p BAC RP11-125O5 (Rosewell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 151886

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 247    attattcatatatatgtaaat 267
              |||||||||||||||||||||
Sbjct: 100387 attattcatatatatgtaaat 100407
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>gb|AC154026.1| Mus musculus 6 NOVECTOR RP24-423A5 (Roswell Park Cancer Institute
              (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 172016

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 32     caccacacccggcatattatttta 55
              |||||||||||||||||| |||||
Sbjct: 146875 caccacacccggcatattttttta 146898
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>gb|AC138680.7| Mus musculus chromosome 1, clone RP23-373D7, complete sequence
          Length = 175790

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 264   aaataaacagaaatgcacct 283
             ||||||||||||||||||||
Sbjct: 26601 aaataaacagaaatgcacct 26582
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>ref|XM_630477.1| Dictyostelium discoideum hypothetical protein (DDB0189069), partial
            mRNA
          Length = 2334

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 251  ttcatatatatgtaaataaa 270
            ||||||||||||||||||||
Sbjct: 1244 ttcatatatatgtaaataaa 1225
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>gb|AC166050.3| Mus musculus BAC clone RP24-138A17 from chromosome 9, complete sequence
          Length = 142457

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 476   aagcatcatcatcaccattg 495
             ||||||||||||||||||||
Sbjct: 57541 aagcatcatcatcaccattg 57560
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>gb|AE001430.2| Plasmodium falciparum 3D7 chromosome 2 section 67 of 73 of the complete
             sequence
          Length = 12129

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 249   tattcatatatatgtaaata 268
             ||||||||||||||||||||
Sbjct: 10662 tattcatatatatgtaaata 10643
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>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome
          Length = 5237682

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 251    ttcatatatatgtaaataaacaga 274
              |||||||||||||| |||||||||
Sbjct: 707349 ttcatatatatgtatataaacaga 707326
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>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome
          Length = 5227419

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 251    ttcatatatatgtaaataaacaga 274
              |||||||||||||| |||||||||
Sbjct: 716460 ttcatatatatgtatataaacaga 716437
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>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome
          Length = 5228663

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 251    ttcatatatatgtaaataaacaga 274
              |||||||||||||| |||||||||
Sbjct: 716355 ttcatatatatgtatataaacaga 716332
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 241     attcacattattcatatata 260
               ||||||||||||||||||||
Sbjct: 4419880 attcacattattcatatata 4419899
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>emb|CR628410.11| Zebrafish DNA sequence from clone CH211-198D23 in linkage group 23,
             complete sequence
          Length = 172610

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 242   ttcacattattcatatatat 261
             ||||||||||||||||||||
Sbjct: 78124 ttcacattattcatatatat 78143
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>gb|AC146047.2| Pan troglodytes BAC clone RP43-15P9 from 7, complete sequence
          Length = 142847

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 7     atctgcatcaccctcaacag 26
             ||||||||||||||||||||
Sbjct: 40472 atctgcatcaccctcaacag 40491
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>gb|AC146213.2| Pan troglodytes BAC clone RP43-33O10 from 7, complete sequence
          Length = 187649

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 7      atctgcatcaccctcaacag 26
              ||||||||||||||||||||
Sbjct: 166960 atctgcatcaccctcaacag 166979
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>gb|AC124006.4| Mus musculus BAC clone RP24-528C3 from chromosome 6, complete sequence
          Length = 146418

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 32    caccacacccggcatattatttta 55
             |||||||||||||||||| |||||
Sbjct: 37741 caccacacccggcatattttttta 37764
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>gb|AC123861.4| Mus musculus BAC clone RP23-351E20 from chromosome 2, complete sequence
          Length = 198454

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 253    catatatatgtaaataaaca 272
              ||||||||||||||||||||
Sbjct: 120473 catatatatgtaaataaaca 120454
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>gb|AC123555.4| Mus musculus BAC clone RP23-139L20 from 1, complete sequence
          Length = 205623

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 264    aaataaacagaaatgcacct 283
              ||||||||||||||||||||
Sbjct: 178430 aaataaacagaaatgcacct 178411
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>gb|AC084384.1| Mus musculus BAC clone RP23-24F24 from 15, complete sequence
          Length = 208833

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 251    ttcatatatatgtaaataaa 270
              ||||||||||||||||||||
Sbjct: 198412 ttcatatatatgtaaataaa 198393
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>gb|AC121854.2| Mus musculus BAC clone RP24-97A15 from 7, complete sequence
          Length = 185164

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 253   catatatatgtaaataaaca 272
             ||||||||||||||||||||
Sbjct: 65523 catatatatgtaaataaaca 65504
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>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 251    ttcatatatatgtaaataaacaga 274
              |||||||||||||| |||||||||
Sbjct: 706363 ttcatatatatgtatataaacaga 706340
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>emb|BX901893.12| Zebrafish DNA sequence from clone CH211-72G23 in linkage group 1,
             complete sequence
          Length = 103132

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 263   taaataaacagaaatgcacc 282
             ||||||||||||||||||||
Sbjct: 34792 taaataaacagaaatgcacc 34773
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>emb|AL136128.9| Human DNA sequence from clone RP1-84N20 on chromosome 6 Contains a novel
              gene, the 5' end of the TPD52L1 gene encoding two variants
              of tumor protein D52-like 1 protein and two CpG islands,
              complete sequence
          Length = 151875

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 253    catatatatgtaaataaaca 272
              ||||||||||||||||||||
Sbjct: 148492 catatatatgtaaataaaca 148473
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>gb|AC099673.2| Homo sapiens chromosome 1 clone RP11-109H10, complete sequence
          Length = 193749

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 243   tcacattattcatatatatgtaaa 266
             ||||||| ||||||||||||||||
Sbjct: 66379 tcacatttttcatatatatgtaaa 66402
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>gb|AC104569.7| Homo sapiens chromosome 15, clone RP11-147D1, complete sequence
          Length = 152001

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 173    aacctgccaagccttgagca 192
              ||||||||||||||||||||
Sbjct: 149917 aacctgccaagccttgagca 149936
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>gb|AC116350.2| Homo sapiens chromosome 5 clone RP11-357F12, complete sequence
          Length = 183009

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 245    acattattcatatatatgtaaata 268
              ||||||| ||||||||||||||||
Sbjct: 104431 acattatacatatatatgtaaata 104454
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>gb|AC097520.2| Homo sapiens BAC clone RP11-562F9 from 4, complete sequence
          Length = 173479

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 245   acattattcatatatatgta 264
             ||||||||||||||||||||
Sbjct: 60515 acattattcatatatatgta 60534
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>gb|AC079633.9|AC079633 Genomic Sequence for Oryza sativa, Nipponbare strain, clone
            OSJNBa0032G08, from Chromosome 3, complete sequence
          Length = 122052

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 241  attcacattattcatatata 260
            ||||||||||||||||||||
Sbjct: 6617 attcacattattcatatata 6598
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>gb|AC132568.3| Mus musculus BAC clone RP24-484M20 from chromosome 1, complete sequence
          Length = 133079

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 249   tattcatatatatgtaaata 268
             ||||||||||||||||||||
Sbjct: 27241 tattcatatatatgtaaata 27222
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>emb|AL844567.22| Zebrafish DNA sequence from clone DKEY-77D17 in linkage group 16,
             complete sequence
          Length = 174845

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 257   tatatgtaaataaacagaaa 276
             ||||||||||||||||||||
Sbjct: 92668 tatatgtaaataaacagaaa 92649
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 241     attcacattattcatatata 260
               ||||||||||||||||||||
Sbjct: 4419995 attcacattattcatatata 4420014
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>gb|AC125471.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0042J17, complete sequence
          Length = 171442

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 241   attcacattattcatatata 260
             ||||||||||||||||||||
Sbjct: 25172 attcacattattcatatata 25191
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>gb|AC135999.4| Homo sapiens chromosome 15, clone RP13-911E13, complete sequence
          Length = 101277

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 173   aacctgccaagccttgagca 192
             ||||||||||||||||||||
Sbjct: 49014 aacctgccaagccttgagca 48995
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>emb|AL929064.11| Mouse DNA sequence from clone RP23-442A7 on chromosome 2, complete
             sequence
          Length = 121402

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 231   aaatatttacattcacattattcatata 258
             ||||||||||||| ||||||| ||||||
Sbjct: 52023 aaatatttacatttacattatgcatata 52050
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>emb|BX649419.6| Zebrafish DNA sequence from clone CH211-106J5 in linkage group 22,
              complete sequence
          Length = 172908

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 268    aaacagaaatgcacctgtac 287
              ||||||||||||||||||||
Sbjct: 134622 aaacagaaatgcacctgtac 134641
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>gb|AC110041.13| Mus musculus chromosome 8, clone RP23-276O15, complete sequence
          Length = 190535

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 249   tattcatatatatgtaaata 268
             ||||||||||||||||||||
Sbjct: 75496 tattcatatatatgtaaata 75515
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>gb|AC160539.11| Mus musculus chromosome 15, clone RP24-163H9, complete sequence
          Length = 151529

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 251   ttcatatatatgtaaataaa 270
             ||||||||||||||||||||
Sbjct: 41085 ttcatatatatgtaaataaa 41066
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>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome
          Length = 5411809

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 251    ttcatatatatgtaaataaacaga 274
              |||||||||||||| |||||||||
Sbjct: 691790 ttcatatatatgtatataaacaga 691767
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>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome
          Length = 5227293

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 251    ttcatatatatgtaaataaacaga 274
              |||||||||||||| |||||||||
Sbjct: 716459 ttcatatatatgtatataaacaga 716436
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>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome
          Length = 5224283

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 251    ttcatatatatgtaaataaacaga 274
              |||||||||||||| |||||||||
Sbjct: 791514 ttcatatatatgtatataaacaga 791491
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>emb|BX000993.6| Zebrafish DNA sequence from clone DKEY-88I22 in linkage group 1,
             complete sequence
          Length = 203257

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 233   atatttacattcacattatt 252
             ||||||||||||||||||||
Sbjct: 37929 atatttacattcacattatt 37910
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>gb|AC144944.5| Mus musculus BAC clone RP23-328K6 from 8, complete sequence
          Length = 185319

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 224   taaggacaaatatttacatt 243
             ||||||||||||||||||||
Sbjct: 61842 taaggacaaatatttacatt 61861
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>emb|CT025678.6| Mouse DNA sequence from clone RP24-153A6 on chromosome 9, complete
             sequence
          Length = 175790

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 476   aagcatcatcatcaccattg 495
             ||||||||||||||||||||
Sbjct: 50612 aagcatcatcatcaccattg 50631
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>gb|AC132241.3| Mus musculus BAC clone RP24-413I2 from chromosome 1, complete sequence
          Length = 138670

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 249    tattcatatatatgtaaata 268
              ||||||||||||||||||||
Sbjct: 100548 tattcatatatatgtaaata 100529
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>emb|AL806531.12| Mouse DNA sequence from clone RP23-188K22 on chromosome X, complete
             sequence
          Length = 70515

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 448   cacaattctgaagtaaacct 467
             ||||||||||||||||||||
Sbjct: 26470 cacaattctgaagtaaacct 26489
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>emb|AL671991.5| Mouse DNA sequence from clone RP23-343L7 on chromosome X, complete
              sequence
          Length = 211866

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 251    ttcatatatatgtaaataaa 270
              ||||||||||||||||||||
Sbjct: 167683 ttcatatatatgtaaataaa 167702
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>emb|AL929046.9| Mouse DNA sequence from clone RP23-308N4 on chromosome 2, complete
              sequence
          Length = 181337

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 253    catatatatgtaaataaaca 272
              ||||||||||||||||||||
Sbjct: 169847 catatatatgtaaataaaca 169866
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>dbj|AP003465.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1043D8
          Length = 230879

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 9      ctgcatcaccctcaacagac 28
              ||||||||||||||||||||
Sbjct: 109825 ctgcatcaccctcaacagac 109844


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,865,328
Number of Sequences: 3902068
Number of extensions: 5865328
Number of successful extensions: 132936
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 132268
Number of HSP's gapped (non-prelim): 668
length of query: 522
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 499
effective length of database: 17,143,297,704
effective search space: 8554505554296
effective search space used: 8554505554296
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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