ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart35e07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF059490.1| Lycopersicon esculentum expansin (EXPA6) mRNA, pa... 54 4e-04
2gb|AF394550.1| Oryza sativa alpha-expansin OsEXPA14 (EXPA14) gen... 48 0.027
3gb|DQ061056.1| Oryza sativa (japonica cultivar-group) alpha-expa... 48 0.027
4dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.027
5dbj|AP005428.2| Oryza sativa (japonica cultivar-group) genomic D... 48 0.027
6gb|AC008365.4| Drosophila melanogaster clone BACR03N12, complete... 42 1.7
7gb|AF394558.1| Oryza sativa alpha-expansin OsEXPA23 (EXPA23) gen... 42 1.7
8gb|DQ061064.1| Oryza sativa (japonica cultivar-group) alpha-expa... 42 1.7
9gb|AY427571.1| Oryza sativa (japonica cultivar-group) seed stora... 42 1.7
10gb|AC010670.8|AC010670 Drosophila melanogaster, chromosome 3R, r... 42 1.7
11gb|AE003742.4| Drosophila melanogaster chromosome 3R, section 80... 42 1.7
12ref|NM_188790.1| Oryza sativa (japonica cultivar-group), predic... 40 6.5
13ref|XM_629393.1| Dictyostelium discoideum hypothetical protein (... 40 6.5
14ref|NM_196687.1| Oryza sativa (japonica cultivar-group) putative... 40 6.5
15gb|AC167120.2| Mus musculus chromosome 7, clone wi1-1755E18, com... 40 6.5
16gb|AF394551.1| Oryza sativa alpha-expansin OsEXPA15 (EXPA15) gen... 40 6.5
17gb|AY131158.1| Physcomitrella patens alpha expansin PpExpA6 (Exp... 40 6.5
18gb|AY131156.1| Physcomitrella patens alpha expansin PpExpA6 (Exp... 40 6.5
19gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.5
20gb|AC007789.1| Oryza sativa BAC OSJNBa0049B20 genomic sequence, ... 40 6.5
21gb|CP000001.1| Bacillus cereus E33L, complete genome 40 6.5
22emb|AL606826.4| Human DNA sequence from clone RP11-154G15 on chr... 40 6.5
23emb|Z97344.2|ATFCA9 Arabidopsis thaliana DNA chromosome 4, ESSA ... 40 6.5
24emb|AL161547.2|ATCHRIV47 Arabidopsis thaliana DNA chromosome 4, ... 40 6.5
25emb|AJ489609.1|CAR489609 Cicer arietinum mRNA for alpha-expansin... 40 6.5
26emb|AL627262.8| Zebrafish DNA sequence from clone RP71-1L7 in li... 40 6.5
27gb|AC087687.4| Homo sapiens chromosome 18, clone RP11-729L2, com... 40 6.5
28gb|AC105730.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
29gb|AC087550.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
30gb|AC079065.8| Homo sapiens chromosome 8, clone RP11-49F13, comp... 40 6.5
31gb|AC090341.9| Homo sapiens chromosome 8, clone RP11-734H6, comp... 40 6.5
32gb|AC134233.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
33gb|DQ061067.1| Oryza sativa (japonica cultivar-group) alpha-expa... 40 6.5
34gb|DQ061057.1| Oryza sativa (japonica cultivar-group) alpha-expa... 40 6.5
35emb|BX323984.7| Zebrafish DNA sequence from clone CH211-157H5 in... 40 6.5
36gb|AC091388.1|AC091388 Drosophila melanogaster, chromosome 2R, r... 40 6.5
37dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
38dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
39dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
40ref|XM_232818.3| PREDICTED: Rattus norvegicus similar to RIKEN c... 40 6.5
41dbj|AP002865.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
42dbj|AK111100.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
43gb|AE003837.3| Drosophila melanogaster chromosome 2R, section 13... 40 6.5
44gb|AC006421.1|AC006421 Drosophila melanogaster, chromosome 2R, r... 40 6.5
45emb|AL954677.8| Zebrafish DNA sequence from clone DKEY-13J14 in ... 40 6.5
46gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
47emb|BX005077.5| Zebrafish DNA sequence from clone CH211-113D11 i... 40 6.5
48emb|AL606969.26| Mouse DNA sequence from clone RP23-331P21 on ch... 40 6.5
49dbj|AB043547.1| Homo sapiens gene for SMAD4, partial cds 40 6.5 
>gb|AF059490.1| Lycopersicon esculentum expansin (EXPA6) mRNA, partial cds
          Length = 498

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                          
Query: 367 tgccagttcgcgccccagttacgagccattg 397
           ||||||||||||||||||||||||| |||||
Sbjct: 497 tgccagttcgcgccccagttacgagtcattg 467
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>gb|AF394550.1| Oryza sativa alpha-expansin OsEXPA14 (EXPA14) gene, complete cds
          Length = 2000

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 72/88 (81%)
 Strand = Plus / Minus

                                                                        
Query: 252  aaatgtctgaccaaacgtccatccagctggaacaatattgttgaacacaagcgtctgccc 311
            |||||| || |||||  ||||||||| ||| ||||| || ||||| ||||||||||| ||
Sbjct: 1512 aaatgtttgcccaaatttccatccagatggcacaatgttcttgaagacaagcgtctggcc 1453

                                        
Query: 312  atctgtgttggtcaatctgaacgagagc 339
            |||  |||| ||||  ||||| ||||||
Sbjct: 1452 atccatgttagtcaccctgaaggagagc 1425
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>gb|DQ061056.1| Oryza sativa (japonica cultivar-group) alpha-expansin 14 (EXPA14)
           mRNA, partial cds
          Length = 760

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 72/88 (81%)
 Strand = Plus / Minus

                                                                       
Query: 252 aaatgtctgaccaaacgtccatccagctggaacaatattgttgaacacaagcgtctgccc 311
           |||||| || |||||  ||||||||| ||| ||||| || ||||| ||||||||||| ||
Sbjct: 737 aaatgtttgcccaaatttccatccagatggcacaatgttcttgaagacaagcgtctggcc 678

                                       
Query: 312 atctgtgttggtcaatctgaacgagagc 339
           |||  |||| ||||  ||||| ||||||
Sbjct: 677 atccatgttagtcaccctgaaggagagc 650
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 72/88 (81%)
 Strand = Plus / Minus

                                                                           
Query: 252     aaatgtctgaccaaacgtccatccagctggaacaatattgttgaacacaagcgtctgccc 311
               |||||| || |||||  ||||||||| ||| ||||| || ||||| ||||||||||| ||
Sbjct: 9569648 aaatgtttgcccaaatttccatccagatggcacaatgttcttgaagacaagcgtctggcc 9569589

                                           
Query: 312     atctgtgttggtcaatctgaacgagagc 339
               |||  |||| ||||  ||||| ||||||
Sbjct: 9569588 atccatgttagtcaccctgaaggagagc 9569561



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                        
Query: 235     aactgcaatttgctcgcaaatgtctgaccaaacgtccatcc 275
               |||||||  ||||| ||||||||||| |||||| |||||||
Sbjct: 9588234 aactgcagcttgcttgcaaatgtctggccaaacttccatcc 9588274



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                        
Query: 235     aactgcaatttgctcgcaaatgtctgaccaaacgtccatcc 275
               |||||||  ||||| ||||||||||| |||||| |||||||
Sbjct: 9578460 aactgcagcttgcttgcaaatgtctggccaaacttccatcc 9578420
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>dbj|AP005428.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0693E08
          Length = 157969

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 72/88 (81%)
 Strand = Plus / Minus

                                                                         
Query: 252   aaatgtctgaccaaacgtccatccagctggaacaatattgttgaacacaagcgtctgccc 311
             |||||| || |||||  ||||||||| ||| ||||| || ||||| ||||||||||| ||
Sbjct: 33866 aaatgtttgcccaaatttccatccagatggcacaatgttcttgaagacaagcgtctggcc 33807

                                         
Query: 312   atctgtgttggtcaatctgaacgagagc 339
             |||  |||| ||||  ||||| ||||||
Sbjct: 33806 atccatgttagtcaccctgaaggagagc 33779



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 235   aactgcaatttgctcgcaaatgtctgaccaaacgtccatcc 275
             |||||||  ||||| ||||||||||| |||||| |||||||
Sbjct: 52452 aactgcagcttgcttgcaaatgtctggccaaacttccatcc 52492



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 235   aactgcaatttgctcgcaaatgtctgaccaaacgtccatcc 275
             |||||||  ||||| ||||||||||| |||||| |||||||
Sbjct: 42678 aactgcagcttgcttgcaaatgtctggccaaacttccatcc 42638
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>gb|AC008365.4| Drosophila melanogaster clone BACR03N12, complete sequence
          Length = 166693

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 53     atatgtacattaagttaaaca 73
              |||||||||||||||||||||
Sbjct: 130335 atatgtacattaagttaaaca 130315
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>gb|AF394558.1| Oryza sativa alpha-expansin OsEXPA23 (EXPA23) gene, complete cds
          Length = 4759

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 235  aactgcaatttgctcgcaaatgtctgaccaaacgtccatcc 275
            |||||||  ||||| ||||||||||| |||||| |||||||
Sbjct: 2272 aactgcagcttgcttgcaaatgtctggccaaacttccatcc 2232
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>gb|DQ061064.1| Oryza sativa (japonica cultivar-group) alpha-expansin 23 (EXPA23)
           mRNA, partial cds
          Length = 850

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 235 aactgcaatttgctcgcaaatgtctgaccaaacgtccatcc 275
           |||||||  ||||| ||||||||||| |||||| |||||||
Sbjct: 780 aactgcagcttgcttgcaaatgtctggccaaacttccatcc 740
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>gb|AY427571.1| Oryza sativa (japonica cultivar-group) seed storage glutelin GluB-4
           gene, promoter region and 5' UTR
          Length = 1474

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 235 aactgcaatttgctcgcaaatgtctgaccaaacgtccatcc 275
           |||||||  ||||| ||||||||||| |||||| |||||||
Sbjct: 311 aactgcagcttgcttgcaaatgtctggccaaacttccatcc 271
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>gb|AC010670.8|AC010670 Drosophila melanogaster, chromosome 3R, region 94E-95A, BAC clone
             BACR01E13, complete sequence
          Length = 155957

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 53    atatgtacattaagttaaaca 73
             |||||||||||||||||||||
Sbjct: 37306 atatgtacattaagttaaaca 37286
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>gb|AE003742.4| Drosophila melanogaster chromosome 3R, section 80 of 118 of the complete
              sequence
          Length = 233746

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 53     atatgtacattaagttaaaca 73
              |||||||||||||||||||||
Sbjct: 147261 atatgtacattaagttaaaca 147241
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>ref|NM_188790.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 756

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 367 tgccagttcgcgccccagtt 386
           ||||||||||||||||||||
Sbjct: 617 tgccagttcgcgccccagtt 598
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>ref|XM_629393.1| Dictyostelium discoideum hypothetical protein (DDB0191654), partial
           mRNA
          Length = 1173

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 107 caatcaatcaatatatgtac 126
           ||||||||||||||||||||
Sbjct: 250 caatcaatcaatatatgtac 269
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>ref|NM_196687.1| Oryza sativa (japonica cultivar-group) putative expansin
           (OSJNBb0016G17.16), mRNA
          Length = 768

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 367 tgccagttcgcgccccagtt 386
           ||||||||||||||||||||
Sbjct: 626 tgccagttcgcgccccagtt 607
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>gb|AC167120.2| Mus musculus chromosome 7, clone wi1-1755E18, complete sequence
          Length = 40383

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 408   gtctgaatcagagctcttaacatccatc 435
             ||||| |||||||||||||| |||||||
Sbjct: 31938 gtctgcatcagagctcttaagatccatc 31965
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>gb|AF394551.1| Oryza sativa alpha-expansin OsEXPA15 (EXPA15) gene, complete cds
          Length = 4105

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 367  tgccagttcgcgccccagtt 386
            ||||||||||||||||||||
Sbjct: 2209 tgccagttcgcgccccagtt 2190
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>gb|AY131158.1| Physcomitrella patens alpha expansin PpExpA6 (ExpA6) mRNA, complete
           cds
          Length = 819

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 367 tgccagttcgcgccccagtt 386
           ||||||||||||||||||||
Sbjct: 689 tgccagttcgcgccccagtt 670
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>gb|AY131156.1| Physcomitrella patens alpha expansin PpExpA6 (ExpA6) gene, complete
            cds
          Length = 1313

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 367  tgccagttcgcgccccagtt 386
            ||||||||||||||||||||
Sbjct: 1086 tgccagttcgcgccccagtt 1067
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 367     tgccagttcgcgccccagtt 386
               ||||||||||||||||||||
Sbjct: 2988169 tgccagttcgcgccccagtt 2988188
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>gb|AC007789.1| Oryza sativa BAC OSJNBa0049B20 genomic sequence, complete sequence
          Length = 182756

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 367    tgccagttcgcgccccagtt 386
              ||||||||||||||||||||
Sbjct: 159471 tgccagttcgcgccccagtt 159490
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>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 143    attaatatatatacagcaat 162
              ||||||||||||||||||||
Sbjct: 973932 attaatatatatacagcaat 973951
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>emb|AL606826.4| Human DNA sequence from clone RP11-154G15 on chromosome 13, complete
             sequence
          Length = 98677

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 136   gcttacaattaatatatata 155
             ||||||||||||||||||||
Sbjct: 90939 gcttacaattaatatatata 90920
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>emb|Z97344.2|ATFCA9 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 9
          Length = 81835

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 143   attaatatatatacagcaatcact 166
             ||||||||||||||||| ||||||
Sbjct: 59786 attaatatatatacagctatcact 59809
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>emb|AL161547.2|ATCHRIV47 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 47
          Length = 198067

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 143   attaatatatatacagcaatcact 166
             ||||||||||||||||| ||||||
Sbjct: 54798 attaatatatatacagctatcact 54821
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>emb|AJ489609.1|CAR489609 Cicer arietinum mRNA for alpha-expansin 4 (expa4 gene)
          Length = 1270

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 259 tgaccaaacgtccatccagctggaacaatattgttg 294
           |||||||| | ||||||||||||| ||| |||||||
Sbjct: 767 tgaccaaaagaccatccagctggagcaacattgttg 732
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>emb|AL627262.8| Zebrafish DNA sequence from clone RP71-1L7 in linkage group 15 Contains
             part of a novel gene similar to human GRID2 (ionotropic
             glutamate receptor delta 2) and a CpG island, complete
             sequence
          Length = 145079

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 142   aattaatatatatacagcaa 161
             ||||||||||||||||||||
Sbjct: 80890 aattaatatatatacagcaa 80871
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>gb|AC087687.4| Homo sapiens chromosome 18, clone RP11-729L2, complete sequence
          Length = 127562

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 22    atatacaccatgcgtataaataaa 45
             |||||||||||| |||||||||||
Sbjct: 54611 atatacaccatgtgtataaataaa 54588
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>gb|AC105730.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0011L14,
              complete sequence
          Length = 117974

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 367    tgccagttcgcgccccagtt 386
              ||||||||||||||||||||
Sbjct: 108092 tgccagttcgcgccccagtt 108073
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>gb|AC087550.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0016G17,
             complete sequence
          Length = 141041

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 367   tgccagttcgcgccccagtt 386
             ||||||||||||||||||||
Sbjct: 94548 tgccagttcgcgccccagtt 94567
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>gb|AC079065.8| Homo sapiens chromosome 8, clone RP11-49F13, complete sequence
          Length = 187837

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 105    accaatcaatcaatatatgt 124
              ||||||||||||||||||||
Sbjct: 112395 accaatcaatcaatatatgt 112414
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>gb|AC090341.9| Homo sapiens chromosome 8, clone RP11-734H6, complete sequence
          Length = 186540

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 105   accaatcaatcaatatatgt 124
             ||||||||||||||||||||
Sbjct: 27550 accaatcaatcaatatatgt 27531
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>gb|AC134233.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0016I15,
              complete sequence
          Length = 166282

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 367    tgccagttcgcgccccagtt 386
              ||||||||||||||||||||
Sbjct: 125635 tgccagttcgcgccccagtt 125654
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>gb|DQ061067.1| Oryza sativa (japonica cultivar-group) alpha-expansin 28 (EXPA28)
           mRNA, partial cds
          Length = 737

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 367 tgccagttcgcgccccagtt 386
           ||||||||||||||||||||
Sbjct: 615 tgccagttcgcgccccagtt 596
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>gb|DQ061057.1| Oryza sativa (japonica cultivar-group) alpha-expansin 15 (EXPA15)
           mRNA, partial cds
          Length = 666

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 367 tgccagttcgcgccccagtt 386
           ||||||||||||||||||||
Sbjct: 613 tgccagttcgcgccccagtt 594
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>emb|BX323984.7| Zebrafish DNA sequence from clone CH211-157H5 in linkage group 1,
            complete sequence
          Length = 177080

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 37   ataaataaacacgcaaatat 56
            ||||||||||||||||||||
Sbjct: 4567 ataaataaacacgcaaatat 4548
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>gb|AC091388.1|AC091388 Drosophila melanogaster, chromosome 2R, region 44C-44D, BAC clone
              BACR14B02, complete sequence
          Length = 194036

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 428    catccatcactttgattgat 447
              ||||||||||||||||||||
Sbjct: 173296 catccatcactttgattgat 173315
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 367      tgccagttcgcgccccagtt 386
                ||||||||||||||||||||
Sbjct: 15240849 tgccagttcgcgccccagtt 15240868
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 367     tgccagttcgcgccccagtt 386
               ||||||||||||||||||||
Sbjct: 2988259 tgccagttcgcgccccagtt 2988278
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 367     tgccagttcgcgccccagtt 386
               ||||||||||||||||||||
Sbjct: 8195350 tgccagttcgcgccccagtt 8195369
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>ref|XM_232818.3| PREDICTED: Rattus norvegicus similar to RIKEN cDNA 5330408M12
            (LOC313067), mRNA
          Length = 3018

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 303  cgtctgcccatctgtgttgg 322
            ||||||||||||||||||||
Sbjct: 2517 cgtctgcccatctgtgttgg 2498
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>dbj|AP002865.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0034C11
          Length = 139399

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 367    tgccagttcgcgccccagtt 386
              ||||||||||||||||||||
Sbjct: 113068 tgccagttcgcgccccagtt 113087
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>dbj|AK111100.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-175-G12, full
           insert sequence
          Length = 893

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 367 tgccagttcgcgccccagtt 386
           ||||||||||||||||||||
Sbjct: 626 tgccagttcgcgccccagtt 607
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>gb|AE003837.3| Drosophila melanogaster chromosome 2R, section 13 of 73 of the complete
              sequence
          Length = 265215

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 428    catccatcactttgattgat 447
              ||||||||||||||||||||
Sbjct: 138853 catccatcactttgattgat 138872
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>gb|AC006421.1|AC006421 Drosophila melanogaster, chromosome 2R, region 44C1-44C5, P1 clones
             DS08614 and DS00667, complete sequence
          Length = 100575

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 428   catccatcactttgattgat 447
             ||||||||||||||||||||
Sbjct: 83513 catccatcactttgattgat 83532
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>emb|AL954677.8| Zebrafish DNA sequence from clone DKEY-13J14 in linkage group 8,
             complete sequence
          Length = 186836

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 142   aattaatatatatacagcaa 161
             ||||||||||||||||||||
Sbjct: 39099 aattaatatatatacagcaa 39080
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 367      tgccagttcgcgccccagtt 386
                ||||||||||||||||||||
Sbjct: 15249090 tgccagttcgcgccccagtt 15249109
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>emb|BX005077.5| Zebrafish DNA sequence from clone CH211-113D11 in linkage group 1,
             complete sequence
          Length = 127560

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 37    ataaataaacacgcaaatat 56
             ||||||||||||||||||||
Sbjct: 15926 ataaataaacacgcaaatat 15945
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>emb|AL606969.26| Mouse DNA sequence from clone RP23-331P21 on chromosome 4, complete
             sequence
          Length = 224344

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 138   ttacaattaatatatataca 157
             ||||||||||||||||||||
Sbjct: 54928 ttacaattaatatatataca 54909
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>dbj|AB043547.1| Homo sapiens gene for SMAD4, partial cds
          Length = 160820

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 22    atatacaccatgcgtataaataaa 45
             |||||||||||| |||||||||||
Sbjct: 23390 atatacaccatgtgtataaataaa 23367


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,540,482
Number of Sequences: 3902068
Number of extensions: 4540482
Number of successful extensions: 79708
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79403
Number of HSP's gapped (non-prelim): 305
length of query: 484
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 462
effective length of database: 17,147,199,772
effective search space: 7922006294664
effective search space used: 7922006294664
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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