ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart35e06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF261275.1| Oryza sativa beta-expansin (EXPB7) mRNA, complete... 107 3e-20
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 107 3e-20
3gb|AC118673.2| Genomic sequence for Oryza sativa, Nipponbare str... 107 3e-20
4gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare str... 107 3e-20
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 107 3e-20
6gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence 107 3e-20
7dbj|AK061423.1| Oryza sativa (japonica cultivar-group) cDNA clon... 107 3e-20
8gb|AF332176.1|AF332176 Zea mays beta-expansin 3 (expB3) mRNA, pa... 86 1e-13
9gb|AY589578.1| Triticum aestivum beta-expansin TaEXPB1 mRNA, com... 86 1e-13
10gb|AY692478.1| Triticum aestivum beta-expansin EXPB6 mRNA, parti... 70 6e-09
11gb|AY543537.1| Triticum aestivum expansin EXPB2 mRNA, complete cds 52 0.001
12ref|NM_197700.1| Oryza sativa (japonica cultivar-group) beta-exp... 48 0.021
13gb|AF261271.1| Oryza sativa beta-expansin (EXPB3) mRNA, complete... 48 0.021
14gb|AC069300.7| Oryza sativa chromosome 10 BAC OSJNBa0010C11 geno... 48 0.021
15gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 gen... 48 0.021
16dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.021
17dbj|AK105318.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.021
18dbj|AK100959.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.021
19gb|AY111405.1| Zea mays CL5426_1 mRNA sequence 48 0.021
20gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 48 0.021
21emb|AJ890019.1| Triticum aestivum mRNA for expansin EXPB11 prote... 46 0.083
22gb|BT017478.1| Zea mays clone EL01N0408G02.c mRNA sequence 44 0.33
23emb|AJ295942.1|FPR295942 Festuca pratensis mRNA for beta expansi... 44 0.33
24gb|AF332181.1|AF332181 Zea mays beta-expansin 8 (expB8) mRNA, co... 44 0.33
25gb|AY533103.1| Triticum aestivum beta-expansin 1 (EXPB1) gene, c... 42 1.3
26gb|AY533101.1| Triticum aestivum beta-expansin 1 (EXPB1) mRNA, c... 42 1.3
27gb|AY533100.1| Triticum aestivum beta-expansin 1 (EXPB1) mRNA, p... 42 1.3
28gb|AF177030.1|AF177030 Cynodon dactylon acidic allergen Cyn d 1 ... 42 1.3
29gb|AF177380.1| Cynodon dactylon acidic Cyn d 1 isoallergen isofo... 42 1.3
30gb|AF177378.1| Cynodon dactylon acidic Cyn d 1 isoallergen isofo... 42 1.3
31gb|AF159703.2| Cynodon dactylon clone 009 acidic Cyn d 1 isoalle... 42 1.3
32gb|AY543540.1| Triticum aestivum expansin EXPB5 mRNA, complete cds 42 1.3
33emb|AL805936.8| Mouse DNA sequence from clone RP23-120K6 on chro... 42 1.3
34ref|XM_467144.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.1
35ref|NM_197701.1| Oryza sativa (japonica cultivar-group) beta-exp... 40 5.1
36gb|AF391107.1| Oryza sativa beta-expansin OsEXPB14 (EXPB14) gene... 40 5.1
37gb|AC156620.10| Mus musculus chromosome 5, clone RP23-80G18, com... 40 5.1
38gb|AF261272.1| Oryza sativa beta-expansin (EXPB4) mRNA, complete... 40 5.1
39gb|AY533104.1| Triticum aestivum beta-expansin 2 (EXPB2) gene, c... 40 5.1
40gb|AY533102.1| Triticum aestivum beta-expansin 2 (EXPB2) mRNA, c... 40 5.1
41emb|AL513128.11| Human DNA sequence from clone RP11-301N24 on ch... 40 5.1
42gb|CP000089.1| Dechloromonas aromatica RCB, complete genome 40 5.1
43emb|BX640438.1| Bordetella bronchiseptica strain RB50, complete ... 40 5.1
44ref|XM_624840.1| PREDICTED: Apis mellifera similar to ENSANGP000... 40 5.1
45dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
46ref|XM_624713.1| PREDICTED: Apis mellifera similar to ENSANGP000... 40 5.1
47dbj|AP005072.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
48dbj|AP005289.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
49dbj|AK105981.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.1
50dbj|AK103929.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.1
51dbj|AK101806.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.1
52dbj|AK101357.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.1
53dbj|AK064012.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.1
54dbj|AK060096.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.1
55emb|AL670256.6| Mouse DNA sequence from clone RP23-300H22 on chr... 40 5.1 
>gb|AF261275.1| Oryza sativa beta-expansin (EXPB7) mRNA, complete cds
          Length = 1210

 Score =  107 bits (54), Expect = 3e-20
 Identities = 84/94 (89%)
 Strand = Plus / Minus

                                                                        
Query: 289  tcgaactggacgtcggagctgtacacggtgtcgggctgccagtcggcggggatgacctgg 348
            ||||||||||||  ||||||||| ||||||| ||||||||||||||||||||||||||| 
Sbjct: 1030 tcgaactggacgatggagctgtaracggtgttgggctgccagtcggcggggatgacctga 971

                                              
Query: 349  tcggcgacgagcgacctgccggacccgttggtga 382
            ||||||| ||| | | |||||||| |||||||||
Sbjct: 970  tcggcgatgagggtcttgccggactcgttggtga 937
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  107 bits (54), Expect = 3e-20
 Identities = 84/94 (89%)
 Strand = Plus / Minus

                                                                          
Query: 289    tcgaactggacgtcggagctgtacacggtgtcgggctgccagtcggcggggatgacctgg 348
              ||||||||||||  ||||||||| ||||||| ||||||||||||||||||||||||||| 
Sbjct: 169426 tcgaactggacgatggagctgtagacggtgttgggctgccagtcggcggggatgacctga 169367

                                                
Query: 349    tcggcgacgagcgacctgccggacccgttggtga 382
              ||||||| ||| | | |||||||| |||||||||
Sbjct: 169366 tcggcgatgagggtcttgccggactcgttggtga 169333
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>gb|AC118673.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
            OSJNBb0080O10, from chromosome 3, complete sequence
          Length = 127917

 Score =  107 bits (54), Expect = 3e-20
 Identities = 84/94 (89%)
 Strand = Plus / Minus

                                                                        
Query: 289  tcgaactggacgtcggagctgtacacggtgtcgggctgccagtcggcggggatgacctgg 348
            ||||||||||||  ||||||||| ||||||| ||||||||||||||||||||||||||| 
Sbjct: 6493 tcgaactggacgatggagctgtagacggtgttgggctgccagtcggcggggatgacctga 6434

                                              
Query: 349  tcggcgacgagcgacctgccggacccgttggtga 382
            ||||||| ||| | | |||||||| |||||||||
Sbjct: 6433 tcggcgatgagggtcttgccggactcgttggtga 6400
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>gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNAb0079B22, from chromosome 3, complete sequence
          Length = 156933

 Score =  107 bits (54), Expect = 3e-20
 Identities = 84/94 (89%)
 Strand = Plus / Minus

                                                                          
Query: 289    tcgaactggacgtcggagctgtacacggtgtcgggctgccagtcggcggggatgacctgg 348
              ||||||||||||  ||||||||| ||||||| ||||||||||||||||||||||||||| 
Sbjct: 103426 tcgaactggacgatggagctgtagacggtgttgggctgccagtcggcggggatgacctga 103367

                                                
Query: 349    tcggcgacgagcgacctgccggacccgttggtga 382
              ||||||| ||| | | |||||||| |||||||||
Sbjct: 103366 tcggcgatgagggtcttgccggactcgttggtga 103333
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
              complete sequence
          Length = 36192742

 Score =  107 bits (54), Expect = 3e-20
 Identities = 84/94 (89%)
 Strand = Plus / Minus

                                                                          
Query: 289    tcgaactggacgtcggagctgtacacggtgtcgggctgccagtcggcggggatgacctgg 348
              ||||||||||||  ||||||||| ||||||| ||||||||||||||||||||||||||| 
Sbjct: 169426 tcgaactggacgatggagctgtagacggtgttgggctgccagtcggcggggatgacctga 169367

                                                
Query: 349    tcggcgacgagcgacctgccggacccgttggtga 382
              ||||||| ||| | | |||||||| |||||||||
Sbjct: 169366 tcggcgatgagggtcttgccggactcgttggtga 169333
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>gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence
          Length = 162241

 Score =  107 bits (54), Expect = 3e-20
 Identities = 84/94 (89%)
 Strand = Plus / Plus

                                                                         
Query: 289   tcgaactggacgtcggagctgtacacggtgtcgggctgccagtcggcggggatgacctgg 348
             ||||||||||||  ||||||||| ||||||| ||||||||||||||||||||||||||| 
Sbjct: 93240 tcgaactggacgatggagctgtagacggtgttgggctgccagtcggcggggatgacctga 93299

                                               
Query: 349   tcggcgacgagcgacctgccggacccgttggtga 382
             ||||||| ||| | | |||||||| |||||||||
Sbjct: 93300 tcggcgatgagggtcttgccggactcgttggtga 93333
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>dbj|AK061423.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-G02, full
           insert sequence
          Length = 1027

 Score =  107 bits (54), Expect = 3e-20
 Identities = 84/94 (89%)
 Strand = Plus / Minus

                                                                       
Query: 289 tcgaactggacgtcggagctgtacacggtgtcgggctgccagtcggcggggatgacctgg 348
           ||||||||||||  ||||||||| ||||||| ||||||||||||||||||||||||||| 
Sbjct: 838 tcgaactggacgatggagctgtagacggtgttgggctgccagtcggcggggatgacctga 779

                                             
Query: 349 tcggcgacgagcgacctgccggacccgttggtga 382
           ||||||| ||| | | |||||||| |||||||||
Sbjct: 778 tcggcgatgagggtcttgccggactcgttggtga 745
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>gb|AF332176.1|AF332176 Zea mays beta-expansin 3 (expB3) mRNA, partial cds
          Length = 788

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 82/95 (86%)
 Strand = Plus / Minus

                                                                       
Query: 289 tcgaactggacgtcggagctgtacacggtgtcgggctgccagtcggcggggatgacctgg 348
           ||||||||||||  ||||||||| ||| |||||||||||||||| || || |||||||||
Sbjct: 648 tcgaactggacgatggagctgtagacgttgtcgggctgccagtctgccggaatgacctgg 589

                                              
Query: 349 tcggcgacgagcgacctgccggacccgttggtgac 383
           || || || |||| | |||||||| ||||||||||
Sbjct: 588 tccgccaccagcgtcttgccggactcgttggtgac 554
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>gb|AY589578.1| Triticum aestivum beta-expansin TaEXPB1 mRNA, complete cds
          Length = 1034

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 58/63 (92%)
 Strand = Plus / Minus

                                                                       
Query: 321 gggctgccagtcggcggggatgacctggtcggcgacgagcgacctgccggacccgttggt 380
           ||||||| ||| ||| |||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 916 gggctgctagtaggccgggatgacctggtcggcgacgagcgacctgccggactcgtcggt 857

              
Query: 381 gac 383
           |||
Sbjct: 856 gac 854
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>gb|AY692478.1| Triticum aestivum beta-expansin EXPB6 mRNA, partial cds
          Length = 671

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                      
Query: 322 ggctgccagtcggcggggatgacctggtcggcgacgagcgacctgccggacccgttggt 380
           |||| ||||||||||||||||||||| |||||| |||||| | |||||||| |||||||
Sbjct: 331 ggctcccagtcggcggggatgacctgttcggcggcgagcgtcttgccggactcgttggt 273



 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 181 caccggaagtcacaggcgacgtctca 206
           ||||||| ||||||||||||||||||
Sbjct: 563 caccggacgtcacaggcgacgtctca 538
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>gb|AY543537.1| Triticum aestivum expansin EXPB2 mRNA, complete cds
          Length = 948

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 71/86 (82%)
 Strand = Plus / Minus

                                                                       
Query: 293 actggacgtcggagctgtacacggtgtcgggctgccagtcggcggggatgacctggtcgg 352
           ||||||||  ||||| ||| | ||||| ||||  ||||| ||| |||||||||| || ||
Sbjct: 873 actggacgaaggagcggtagaaggtgttgggcctccagttggccgggatgaccttgttgg 814

                                     
Query: 353 cgacgagcgacctgccggacccgttg 378
           ||||||||| | |||||||| |||||
Sbjct: 813 cgacgagcgtcttgccggactcgttg 788
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>ref|NM_197700.1| Oryza sativa (japonica cultivar-group) beta-expansin EXPB3
           (OSJNBb0014I11.1), mRNA
          Length = 904

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                   
Query: 327 ccagtcggcggggatgacctggtcggcgacgagcgacctgccggacccgttggtga 382
           ||||| ||| ||||||||||||  ||||||||||  | |||||||| |||||||||
Sbjct: 859 ccagttggccgggatgacctggctggcgacgagctgcttgccggactcgttggtga 804
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>gb|AF261271.1| Oryza sativa beta-expansin (EXPB3) mRNA, complete cds
          Length = 1319

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                   
Query: 327 ccagtcggcggggatgacctggtcggcgacgagcgacctgccggacccgttggtga 382
           ||||| ||| ||||||||||||  ||||||||||  | |||||||| |||||||||
Sbjct: 858 ccagttggccgggatgacctggctggcgacgagctgcttgccggactcgttggtga 803
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>gb|AC069300.7| Oryza sativa chromosome 10 BAC OSJNBa0010C11 genomic sequence,
            complete sequence
          Length = 147117

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                    
Query: 327  ccagtcggcggggatgacctggtcggcgacgagcgacctgccggacccgttggtga 382
            ||||| ||| ||||||||||||  ||||||||||  | |||||||| |||||||||
Sbjct: 4107 ccagttggccgggatgacctggctggcgacgagctgcttgccggactcgttggtga 4162



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                 
Query: 327   ccagtcggcggggatgacctggtcggcgacgagcgacctgccggacccgttg 378
             ||||| ||| |||||||| | || ||||||||||| | |||||||| |||||
Sbjct: 16728 ccagttggccgggatgacgttgttggcgacgagcgtcttgccggactcgttg 16677
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>gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 genomic sequence,
            complete sequence
          Length = 135510

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                    
Query: 327  ccagtcggcggggatgacctggtcggcgacgagcgacctgccggacccgttggtga 382
            ||||| ||| ||||||||||||  ||||||||||  | |||||||| |||||||||
Sbjct: 5266 ccagttggccgggatgacctggctggcgacgagctgcttgccggactcgttggtga 5211
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                        
Query: 327      ccagtcggcggggatgacctggtcggcgacgagcgacctgccggacccgttggtga 382
                ||||| ||| ||||||||||||  ||||||||||  | |||||||| |||||||||
Sbjct: 21329093 ccagttggccgggatgacctggctggcgacgagctgcttgccggactcgttggtga 21329148



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                    
Query: 327      ccagtcggcggggatgacctggtcggcgacgagcgacctgccggacccgttg 378
                ||||| ||| |||||||| | || ||||||||||| | |||||||| |||||
Sbjct: 21341715 ccagttggccgggatgacgttgttggcgacgagcgtcttgccggactcgttg 21341664
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>dbj|AK105318.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-F11, full
           insert sequence
          Length = 1031

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                   
Query: 327 ccagtcggcggggatgacctggtcggcgacgagcgacctgccggacccgttggtga 382
           ||||| ||| ||||||||||||  ||||||||||  | |||||||| |||||||||
Sbjct: 614 ccagttggccgggatgacctggctggcgacgagctgcttgccggactcgttggtga 559
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>dbj|AK100959.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023140O05, full
           insert sequence
          Length = 1313

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                   
Query: 327 ccagtcggcggggatgacctggtcggcgacgagcgacctgccggacccgttggtga 382
           ||||| ||| ||||||||||||  ||||||||||  | |||||||| |||||||||
Sbjct: 870 ccagttggccgggatgacctggctggcgacgagctgcttgccggactcgttggtga 815
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>gb|AY111405.1| Zea mays CL5426_1 mRNA sequence
          Length = 528

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 327 ccagtcggcggggatgacctggtcggcgacgagcgacctgccggacccgttggtga 382
           ||||| ||| ||||||||||||| ||| || |||| | |||||||| |||||||||
Sbjct: 299 ccagttggccgggatgacctggttggccaccagcgtcttgccggactcgttggtga 354
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                        
Query: 327      ccagtcggcggggatgacctggtcggcgacgagcgacctgccggacccgttggtga 382
                ||||| ||| ||||||||||||  ||||||||||  | |||||||| |||||||||
Sbjct: 21340357 ccagttggccgggatgacctggctggcgacgagctgcttgccggactcgttggtga 21340412



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                    
Query: 327      ccagtcggcggggatgacctggtcggcgacgagcgacctgccggacccgttg 378
                ||||| ||| |||||||| | || ||||||||||| | |||||||| |||||
Sbjct: 21352978 ccagttggccgggatgacgttgttggcgacgagcgtcttgccggactcgttg 21352927
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>emb|AJ890019.1| Triticum aestivum mRNA for expansin EXPB11 protein precursor
           (expb11 gene), cultivar Wyuna, from endosperm tissue
          Length = 1032

 Score = 46.1 bits (23), Expect = 0.083
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                          
Query: 336 ggggatgacctggtcggcgacgagcgacctgccggacccgttggtga 382
           |||||||||||| |||||||| || | | |||||||| |||||||||
Sbjct: 774 ggggatgacctgttcggcgacaagtgtcttgccggactcgttggtga 728
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>gb|BT017478.1| Zea mays clone EL01N0408G02.c mRNA sequence
          Length = 832

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 70/86 (81%)
 Strand = Plus / Minus

                                                                       
Query: 293 actggacgtcggagctgtacacggtgtcgggctgccagtcggcggggatgacctggtcgg 352
           ||||||||  ||||| ||| | ||||| |||  |||||| ||| |||||||| | || ||
Sbjct: 297 actggacgaaggagcggtagaaggtgttggggcgccagttggccgggatgacgttgttgg 238

                                     
Query: 353 cgacgagcgacctgccggacccgttg 378
           ||||||||| | |||||||| |||||
Sbjct: 237 cgacgagcgtcttgccggactcgttg 212
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>emb|AJ295942.1|FPR295942 Festuca pratensis mRNA for beta expansin B3 (expB3 gene)
          Length = 1219

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 337 gggatgacctggtcggcgacgagcgacctgccggacccgttggtga 382
           ||||||| || |||||||||||||  | |||||||| |||||||||
Sbjct: 854 gggatgatcttgtcggcgacgagctgcttgccggactcgttggtga 809
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>gb|AF332181.1|AF332181 Zea mays beta-expansin 8 (expB8) mRNA, complete cds
          Length = 1479

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 70/86 (81%)
 Strand = Plus / Minus

                                                                       
Query: 293 actggacgtcggagctgtacacggtgtcgggctgccagtcggcggggatgacctggtcgg 352
           ||||||||  ||||| ||| | ||||| |||  |||||| ||| |||||||| | || ||
Sbjct: 933 actggacgaaggagcggtagaaggtgttggggcgccagttggccgggatgacgttgttgg 874

                                     
Query: 353 cgacgagcgacctgccggacccgttg 378
           ||||||||| | |||||||| |||||
Sbjct: 873 cgacgagcgtcttgccggactcgttg 848
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>gb|AY533103.1| Triticum aestivum beta-expansin 1 (EXPB1) gene, complete cds
          Length = 1149

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 308  tgtacacggtgtcgggctgccagtcggcggggatgac 344
            |||| |||||||||| || ||||| ||||||||||||
Sbjct: 1115 tgtagacggtgtcggccttccagttggcggggatgac 1079
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>gb|AY533101.1| Triticum aestivum beta-expansin 1 (EXPB1) mRNA, complete cds
          Length = 1111

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 308 tgtacacggtgtcgggctgccagtcggcggggatgac 344
           |||| |||||||||| || ||||| ||||||||||||
Sbjct: 831 tgtagacggtgtcggccttccagttggcggggatgac 795
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>gb|AY533100.1| Triticum aestivum beta-expansin 1 (EXPB1) mRNA, partial cds
          Length = 496

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 308 tgtacacggtgtcgggctgccagtcggcggggatgac 344
           |||| |||||||||| || ||||| ||||||||||||
Sbjct: 291 tgtagacggtgtcggccttccagttggcggggatgac 255
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>gb|AF177030.1|AF177030 Cynodon dactylon acidic allergen Cyn d 1 precursor, mRNA, partial
           cds
          Length = 735

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 308 tgtacacggtgtcgggctgccagtcggcggggatgac 344
           |||| ||||||||||||| ||||||  ||||||||||
Sbjct: 715 tgtagacggtgtcgggcttccagtcttcggggatgac 679
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>gb|AF177380.1| Cynodon dactylon acidic Cyn d 1 isoallergen isoform 4 precursor,
           mRNA, complete cds
          Length = 789

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 308 tgtacacggtgtcgggctgccagtcggcggggatgac 344
           |||| ||||||||||||| ||||||  ||||||||||
Sbjct: 769 tgtagacggtgtcgggcttccagtcttcggggatgac 733
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>gb|AF177378.1| Cynodon dactylon acidic Cyn d 1 isoallergen isoform 2 precursor,
           mRNA, complete cds
          Length = 789

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 308 tgtacacggtgtcgggctgccagtcggcggggatgac 344
           |||| ||||||||||||| ||||||  ||||||||||
Sbjct: 769 tgtagacggtgtcgggcttccagtcttcggggatgac 733
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>gb|AF159703.2| Cynodon dactylon clone 009 acidic Cyn d 1 isoallergen isoform 1
           precursor, mRNA, partial cds
          Length = 735

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 308 tgtacacggtgtcgggctgccagtcggcggggatgac 344
           |||| ||||||||||||| ||||||  ||||||||||
Sbjct: 715 tgtagacggtgtcgggcttccagtcttcggggatgac 679
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>gb|AY543540.1| Triticum aestivum expansin EXPB5 mRNA, complete cds
          Length = 960

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 308 tgtacacggtgtcgggctgccagtcggcggggatgac 344
           |||| |||||||||| || ||||| ||||||||||||
Sbjct: 784 tgtagacggtgtcggccttccagttggcggggatgac 748
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>emb|AL805936.8| Mouse DNA sequence from clone RP23-120K6 on chromosome X, complete
             sequence
          Length = 151030

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 115   aggctgccacgtatgttatgt 135
             |||||||||||||||||||||
Sbjct: 25800 aggctgccacgtatgttatgt 25780
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>ref|XM_467144.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 822

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                               
Query: 320 cgggctgccagtcggcggggatgacctggtcggcgacgagcgacctgccgga 371
           ||||||||||  ||||||||||||| | |  ||||||||||| || ||||||
Sbjct: 778 cgggctgccacccggcggggatgacgttgctggcgacgagcgtccggccgga 727
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>ref|NM_197701.1| Oryza sativa (japonica cultivar-group) beta-expansin EXPB4
           (OSJNBa0010C11.2), mRNA
          Length = 1340

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                               
Query: 327 ccagtcggcggggatgacctggtcggcgacgagcgacctgccggacccgttg 378
           ||||| ||| |||||||| | || ||||||||||| | |||||||| |||||
Sbjct: 926 ccagttggccgggatgacgttgttggcgacgagcgtcttgccggactcgttg 875
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>gb|AF391107.1| Oryza sativa beta-expansin OsEXPB14 (EXPB14) gene, partial cds
          Length = 1348

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                               
Query: 320 cgggctgccagtcggcggggatgacctggtcggcgacgagcgacctgccgga 371
           ||||||||||  ||||||||||||| | |  ||||||||||| || ||||||
Sbjct: 438 cgggctgccacccggcggggatgacgttgctggcgacgagcgtccggccgga 387
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>gb|AC156620.10| Mus musculus chromosome 5, clone RP23-80G18, complete sequence
          Length = 248320

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 224   aaaaaatccatgcaggcatg 243
             ||||||||||||||||||||
Sbjct: 95710 aaaaaatccatgcaggcatg 95691
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>gb|AF261272.1| Oryza sativa beta-expansin (EXPB4) mRNA, complete cds
          Length = 1249

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                               
Query: 327 ccagtcggcggggatgacctggtcggcgacgagcgacctgccggacccgttg 378
           ||||| ||| |||||||| | || ||||||||||| | |||||||| |||||
Sbjct: 882 ccagttggccgggatgacgttgttggcgacgagcgtcttgccggactcgttg 831
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>gb|AY533104.1| Triticum aestivum beta-expansin 2 (EXPB2) gene, complete cds
          Length = 1216

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 313  acggtgtcgggctgccagtcggcggggatgac 344
            |||||||||| || ||||| ||||||||||||
Sbjct: 1031 acggtgtcggccttccagttggcggggatgac 1000
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>gb|AY533102.1| Triticum aestivum beta-expansin 2 (EXPB2) mRNA, complete cds
          Length = 1068

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 313 acggtgtcgggctgccagtcggcggggatgac 344
           |||||||||| || ||||| ||||||||||||
Sbjct: 796 acggtgtcggccttccagttggcggggatgac 765
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>emb|AL513128.11| Human DNA sequence from clone RP11-301N24 on chromosome 10 Contains the
              3' end of the SPAG6 gene for sperm associated antigen 6
              (pf16, MGC26276, Repro-SA-1,DKFZp434I153), the 3' end of a
              novel gene, the 3' end of the PIP5K2A gene for
              phosphatidylinositol-4-phosphate 5-kinase type II alpha and
              two CpG islands, complete sequence
          Length = 184685

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 20     aacttgggtaatacaggaga 39
              ||||||||||||||||||||
Sbjct: 137785 aacttgggtaatacaggaga 137804
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>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 78      ctactcgctgcctactccag 97
               ||||||||||||||||||||
Sbjct: 3654467 ctactcgctgcctactccag 3654486
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>emb|BX640438.1| Bordetella bronchiseptica strain RB50, complete genome; segment 2/16
          Length = 347786

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 332    cggcggggatgacctggtcg 351
              ||||||||||||||||||||
Sbjct: 213593 cggcggggatgacctggtcg 213612
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>ref|XM_624840.1| PREDICTED: Apis mellifera similar to ENSANGP00000003616 (LOC552466),
            mRNA
          Length = 2804

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 138  tacgtgtacatatgtagctt 157
            ||||||||||||||||||||
Sbjct: 2673 tacgtgtacatatgtagctt 2692
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                    
Query: 320      cgggctgccagtcggcggggatgacctggtcggcgacgagcgacctgccgga 371
                ||||||||||  ||||||||||||| | |  ||||||||||| || ||||||
Sbjct: 26658437 cgggctgccacccggcggggatgacgttgctggcgacgagcgtccggccgga 26658386
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>ref|XM_624713.1| PREDICTED: Apis mellifera similar to ENSANGP00000003616 (LOC552337),
            mRNA
          Length = 2987

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 138  tacgtgtacatatgtagctt 157
            ||||||||||||||||||||
Sbjct: 2856 tacgtgtacatatgtagctt 2875
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>dbj|AP005072.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0708H12
          Length = 162381

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                 
Query: 320   cgggctgccagtcggcggggatgacctggtcggcgacgagcgacctgccgga 371
             ||||||||||  ||||||||||||| | |  ||||||||||| || ||||||
Sbjct: 20467 cgggctgccacccggcggggatgacgttgctggcgacgagcgtccggccgga 20416
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>dbj|AP005289.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1112_F09
          Length = 139371

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                 
Query: 320   cgggctgccagtcggcggggatgacctggtcggcgacgagcgacctgccgga 371
             ||||||||||  ||||||||||||| | |  ||||||||||| || ||||||
Sbjct: 92598 cgggctgccacccggcggggatgacgttgctggcgacgagcgtccggccgga 92547
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>dbj|AK105981.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-F12, full
           insert sequence
          Length = 1290

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                               
Query: 327 ccagtcggcggggatgacctggtcggcgacgagcgacctgccggacccgttg 378
           ||||| ||| |||||||| | || ||||||||||| | |||||||| |||||
Sbjct: 939 ccagttggccgggatgacgttgttggcgacgagcgtcttgccggactcgttg 888
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>dbj|AK103929.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D11, full
           insert sequence
          Length = 1266

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                               
Query: 327 ccagtcggcggggatgacctggtcggcgacgagcgacctgccggacccgttg 378
           ||||| ||| |||||||| | || ||||||||||| | |||||||| |||||
Sbjct: 932 ccagttggccgggatgacgttgttggcgacgagcgtcttgccggactcgttg 881
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>dbj|AK101806.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033066K12, full
            insert sequence
          Length = 1883

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                
Query: 327  ccagtcggcggggatgacctggtcggcgacgagcgacctgccggacccgttg 378
            ||||| ||| |||||||| | || ||||||||||| | |||||||| |||||
Sbjct: 1516 ccagttggccgggatgacgttgttggcgacgagcgtcttgccggactcgttg 1465
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>dbj|AK101357.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033035B15, full
            insert sequence
          Length = 1475

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                
Query: 327  ccagtcggcggggatgacctggtcggcgacgagcgacctgccggacccgttg 378
            ||||| ||| |||||||| | || ||||||||||| | |||||||| |||||
Sbjct: 1120 ccagttggccgggatgacgttgttggcgacgagcgtcttgccggactcgttg 1069
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>dbj|AK064012.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-H01, full
           insert sequence
          Length = 1794

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                               
Query: 327 ccagtcggcggggatgacctggtcggcgacgagcgacctgccggacccgttg 378
           ||||| ||| |||||||| | || ||||||||||| | |||||||| |||||
Sbjct: 938 ccagtaggccgggatgacgttgttggcgacgagcgtcttgccggactcgttg 887
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>dbj|AK060096.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-G02, full
           insert sequence
          Length = 1293

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                               
Query: 327 ccagtcggcggggatgacctggtcggcgacgagcgacctgccggacccgttg 378
           ||||| ||| |||||||| | || ||||||||||| | |||||||| |||||
Sbjct: 938 ccagttggccgggatgacgttgttggcgacgagcgtcttgccggactcgttg 887
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>emb|AL670256.6| Mouse DNA sequence from clone RP23-300H22 on chromosome 4, complete
              sequence
          Length = 237318

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 28     taatacaggagaaattacaa 47
              ||||||||||||||||||||
Sbjct: 146275 taatacaggagaaattacaa 146256


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,407,704
Number of Sequences: 3902068
Number of extensions: 2407704
Number of successful extensions: 36090
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 35931
Number of HSP's gapped (non-prelim): 159
length of query: 385
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 363
effective length of database: 17,147,199,772
effective search space: 6224433517236
effective search space used: 6224433517236
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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