>RS3_ICTPU (Q90YS2) 40S ribosomal protein S3|
          Length = 245

 Score = 89.4 bits (220), Expect = 5e-18
 Identities = 42/54 (77%), Positives = 45/54 (83%)
 Frame = -3

Query: 510 PVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLGPTTPLPDLVTIHPPKEE 349
           PVN Y+D AVRHVLLRQGVLGIKVKIML WDP GK+GP  PLPD V+I  PKEE
Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEE 216

>RS3_RAT (P62909) 40S ribosomal protein S3|
          Length = 243

 Score = 88.2 bits (217), Expect = 1e-17
 Identities = 41/54 (75%), Positives = 45/54 (83%)
 Frame = -3

Query: 510 PVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLGPTTPLPDLVTIHPPKEE 349
           PVN Y+D AVRHVLLRQGVLGIKVKIML WDP GK+GP  PLPD V+I  PK+E
Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216

>RS3_MOUSE (P62908) 40S ribosomal protein S3|
          Length = 243

 Score = 88.2 bits (217), Expect = 1e-17
 Identities = 41/54 (75%), Positives = 45/54 (83%)
 Frame = -3

Query: 510 PVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLGPTTPLPDLVTIHPPKEE 349
           PVN Y+D AVRHVLLRQGVLGIKVKIML WDP GK+GP  PLPD V+I  PK+E
Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216

>RS32_XENLA (P47835) 40S ribosomal protein S3-B (S1B)|
          Length = 246

 Score = 88.2 bits (217), Expect = 1e-17
 Identities = 41/54 (75%), Positives = 45/54 (83%)
 Frame = -3

Query: 510 PVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLGPTTPLPDLVTIHPPKEE 349
           PVN Y+D AVRHVLLRQGVLGIKVKIML WDP GK+GP  PLPD V+I  PK+E
Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216

>RS31_XENLA (P02350) 40S ribosomal protein S3-A (S1A)|
          Length = 246

 Score = 88.2 bits (217), Expect = 1e-17
 Identities = 41/54 (75%), Positives = 45/54 (83%)
 Frame = -3

Query: 510 PVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLGPTTPLPDLVTIHPPKEE 349
           PVN Y+D AVRHVLLRQGVLGIKVKIML WDP GK+GP  PLPD V+I  PK+E
Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216

>RS3_PONPY (Q5R465) 40S ribosomal protein S3|
          Length = 243

 Score = 87.8 bits (216), Expect = 2e-17
 Identities = 41/54 (75%), Positives = 45/54 (83%)
 Frame = -3

Query: 510 PVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLGPTTPLPDLVTIHPPKEE 349
           PVN Y+D AVRHVLLRQGVLGIKVKIML WDP GK+GP  PLPD V+I  PK+E
Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDE 216

>RS3_HUMAN (P23396) 40S ribosomal protein S3|
          Length = 243

 Score = 87.8 bits (216), Expect = 2e-17
 Identities = 41/54 (75%), Positives = 45/54 (83%)
 Frame = -3

Query: 510 PVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLGPTTPLPDLVTIHPPKEE 349
           PVN Y+D AVRHVLLRQGVLGIKVKIML WDP GK+GP  PLPD V+I  PK+E
Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDE 216

>RS3_BOVIN (Q3T169) 40S ribosomal protein S3|
          Length = 243

 Score = 87.8 bits (216), Expect = 2e-17
 Identities = 41/54 (75%), Positives = 45/54 (83%)
 Frame = -3

Query: 510 PVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLGPTTPLPDLVTIHPPKEE 349
           PVN Y+D AVRHVLLRQGVLGIKVKIML WDP GK+GP  PLPD V+I  PK+E
Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDE 216

>RS3_AMBME (P79891) 40S ribosomal protein S3|
          Length = 253

 Score = 87.8 bits (216), Expect = 2e-17
 Identities = 41/54 (75%), Positives = 45/54 (83%)
 Frame = -3

Query: 510 PVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLGPTTPLPDLVTIHPPKEE 349
           PVN Y+D AVRHVLLRQGVLGIKVKIML WDP GK+GP  PLPD V+I  PK+E
Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLAWDPSGKIGPKKPLPDHVSIVEPKDE 216

>RS3_DROME (Q06559) 40S ribosomal protein S3|
          Length = 246

 Score = 81.6 bits (200), Expect = 1e-15
 Identities = 37/60 (61%), Positives = 45/60 (75%)
 Frame = -3

Query: 510 PVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLGPTTPLPDLVTIHPPKEEDELRPP 331
           P N+Y++ A RHVLLRQGVLGIKVK+ML +DPK K+GP  PLPD V++  PKEE     P
Sbjct: 165 PCNDYVETATRHVLLRQGVLGIKVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETP 224

>RS3_MANSE (P48153) 40S ribosomal protein S3|
          Length = 243

 Score = 77.8 bits (190), Expect = 2e-14
 Identities = 39/75 (52%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
 Frame = -3

Query: 510 PVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLGPTTPLPDLVTIHPPKEED-ELRP 334
           P N+Y++ A RHVLLRQGVLGIKVKIML WD +GK GP  P PD + +  PK+E   L P
Sbjct: 164 PCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPAPLEP 223

Query: 333 PALIEV*TPSSASRP 289
            + I    P+   +P
Sbjct: 224 TSDIRSLAPAPLPQP 238

>RS3_CAEEL (P48152) 40S ribosomal protein S3|
          Length = 247

 Score = 74.3 bits (181), Expect = 2e-13
 Identities = 36/54 (66%), Positives = 42/54 (77%)
 Frame = -3

Query: 510 PVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLGPTTPLPDLVTIHPPKEE 349
           PVN+YI  AVRHV LRQGV+GIKVKIML +DP+G+ GP   LPD V I  P+EE
Sbjct: 165 PVNDYIQQAVRHVQLRQGVIGIKVKIMLPYDPRGQNGPRNALPDHVQIVEPQEE 218

>RS3_YEAST (P05750) 40S ribosomal protein S3 (YS3) (RP13)|
          Length = 239

 Score = 69.3 bits (168), Expect = 6e-12
 Identities = 37/62 (59%), Positives = 45/62 (72%)
 Frame = -3

Query: 510 PVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLGPTTPLPDLVTIHPPKEEDELRPP 331
           PVN++ID A RHVL+RQGVLGIKVKIM D   K + GP   LPD VTI  PKEE+ +  P
Sbjct: 162 PVNDFIDTATRHVLMRQGVLGIKVKIMRD-PAKSRTGPKA-LPDAVTIIEPKEEEPILAP 219

Query: 330 AL 325
           ++
Sbjct: 220 SV 221

>RS3_SCHPO (O60128) 40S ribosomal protein S3|
          Length = 249

 Score = 62.8 bits (151), Expect = 5e-10
 Identities = 32/60 (53%), Positives = 41/60 (68%)
 Frame = -3

Query: 510 PVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLGPTTPLPDLVTIHPPKEEDELRPP 331
           P  ++ID+A RHVLLRQGVLG+KVKIML   P+ K      LPD+V +  PKEE+ +  P
Sbjct: 165 PAVDFIDSATRHVLLRQGVLGVKVKIML---PEPKTRQKKSLPDIVVVLDPKEEEPITKP 221

>RS3_ENCCU (Q8SQM3) 40S ribosomal protein S3|
          Length = 228

 Score = 58.2 bits (139), Expect = 1e-08
 Identities = 27/52 (51%), Positives = 36/52 (69%)
 Frame = -3

Query: 507 VNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLGPTTPLPDLVTIHPPKE 352
           V +YI+     V  +QGV+GI+V+IML +DP+G LGP  PLPD +TI  P E
Sbjct: 175 VKDYINTGYATVETKQGVIGIQVRIMLPYDPEGVLGPNYPLPDRITILEPSE 226

>IL2RB_PANTR (Q38J84) Interleukin-2 receptor beta chain precursor (IL-2|
           receptor) (P70-75) (High affinity IL-2 receptor beta
           subunit) (CD122 antigen)
          Length = 551

 Score = 33.5 bits (75), Expect = 0.35
 Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
 Frame = -3

Query: 447 IKVKIMLDWDPKGKLGPTTP-LPDLVTIHPPKE 352
           ++ ++  DWDP+  LGP TP +PDLV   PP E
Sbjct: 459 LQERVPRDWDPQ-PLGPPTPGVPDLVDFQPPPE 490

>IL2RB_HUMAN (P14784) Interleukin-2 receptor beta chain precursor (IL-2|
           receptor) (P70-75) (p75) (High affinity IL-2 receptor
           beta subunit) (CD122 antigen)
          Length = 551

 Score = 33.5 bits (75), Expect = 0.35
 Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
 Frame = -3

Query: 447 IKVKIMLDWDPKGKLGPTTP-LPDLVTIHPPKE 352
           ++ ++  DWDP+  LGP TP +PDLV   PP E
Sbjct: 459 LQERVPRDWDPQ-PLGPPTPGVPDLVDFQPPPE 490

>RS3_METKA (Q8TX35) 30S ribosomal protein S3P|
          Length = 227

 Score = 32.7 bits (73), Expect = 0.60
 Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
 Frame = -3

Query: 510 PVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLGPTTPLPDLVTIHPPKE-EDELR 337
           P +EY+       + + G +G+ V+IM          P   LPD + I PP+E EDEL+
Sbjct: 165 PGDEYMIEGYVQAVTKPGAIGVTVRIM---------PPDVELPDELEIRPPEEVEDELK 214

>IL2RB_MACFA (Q38J85) Interleukin-2 receptor beta chain precursor (IL-2|
           receptor) (P70-75) (High affinity IL-2 receptor beta
           subunit) (CD122 antigen)
          Length = 551

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = -3

Query: 447 IKVKIMLDWDPKGKLGPTTP-LPDLVTIHPPKE 352
           ++ ++  DWDP+  LGP TP +PDLV   P  E
Sbjct: 459 LQERVPRDWDPQP-LGPPTPGVPDLVDFQPRPE 490

>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2|
           (ALL1-related protein)
          Length = 5262

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -3

Query: 417 PKGKLGPTTPLPDLVTIHPPKEEDELRPPAL 325
           P  ++   +PLP +  + PP EE  L PPAL
Sbjct: 646 PPPEVSRLSPLPVVSRLSPPPEESPLSPPAL 676

>CBID_CHRVO (Q7NXR0) Putative cobalt-precorrin-6A synthase [deacetylating] (EC|
           2.1.1.-)
          Length = 377

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 23/56 (41%), Positives = 27/56 (48%)
 Frame = +1

Query: 301 TTGSLDLNQSRGAQLVLLLRGVDGDEVRQGGGRAKFALGVPVKHNLHLDTKNALSE 468
           TTGS      + A L+LLL GVD DEV        F L VPV+    LD     +E
Sbjct: 23  TTGSCATAAVKAA-LMLLLDGVDADEVFISLPDPDFYLAVPVESVAWLDENTVRAE 77

>RT03_ORYSA (P46773) Mitochondrial ribosomal protein S3|
          Length = 538

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -3

Query: 504 NEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGK 406
           N+ ID A+  V  R G+ G+KV+I    + KG+
Sbjct: 498 NQKIDYALAEVSTRNGISGVKVRISYSQNKKGR 530

>HEMA_CVP67 (Q8BB26) Hemagglutinin-esterase precursor (EC 3.1.1.53) (HE) (E3|
           glycoprotein)
          Length = 424

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = +1

Query: 58  RCHKQNKLDSLIQSKQWFFG-IHKKYLVSANLV*TKLKWQHNIEALHINFCKEGNQTLHS 234
           +C      D  +Q+K  F+  ++KK  V  +L    + + +N  A    FCK G+  L++
Sbjct: 112 KCTSAGNNDIWMQNKGLFYTQVYKKMAVYRSLTLVNVPYVYNGSAQPTAFCKSGSLILNN 171

Query: 235 P 237
           P
Sbjct: 172 P 172

>TBX6_MOUSE (P70327) T-box transcription factor TBX6 (T-box protein 6)|
          Length = 540

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = -3

Query: 426 DWDPKGKLGPTTPLPDLVTIHP 361
           DW+P GK  P   LPD V IHP
Sbjct: 157 DWEPSGKAEPR--LPDRVYIHP 176


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,829,602
Number of Sequences: 219361
Number of extensions: 1335835
Number of successful extensions: 3718
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 3596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3715
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3812186532
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)