>gb|AF391808.2| Zea mays chromosome 9S bz genomic region strain McC
          Length = 226001

 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 131/158 (82%)
 Strand = Plus / Plus

                                                                          
Query: 185    ttgaagtgcgccagcgtgtgcgcccaccggatgtcctccttgagctggtgcacgccaatg 244
              ||||||||| |||| ||||| |||||||  | ||||| ||| ||||||||||| ||||||
Sbjct: 128236 ttgaagtgctccagtgtgtgtgcccacctcaggtcctgcttcagctggtgcaccccaatg 128295

                                                                          
Query: 245    gcgtcctccaggaaatccttggcctgggcgcccttgtagtcgtacatcctggggaagatg 304
              | || ||||| ||| ||||   | | ||| | ||||||||| ||||||||||||||||||
Sbjct: 128296 gtgttctccaagaagtcctcacctttggcactcttgtagtcatacatcctggggaagatg 128355

                                                    
Query: 305    ttaaccctgttcttggccttgccgccctcgttcagcca 342
              || |||| |||||||||||||  ||||  |||||||||
Sbjct: 128356 ttcacccggttcttggccttgtggcccatgttcagcca 128393



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                   
Query: 372    tggccttcctcctgaccatgtcggagtcggcgatcca 408
              |||||| |||||||||||||||||||  |||||||||
Sbjct: 128585 tggcctccctcctgaccatgtcggaggtggcgatcca 128621

>gb|AF448416.1| Zea mays B73 chromosome 9S bz genomic region
          Length = 106186

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 129/158 (81%)
 Strand = Plus / Plus

                                                                         
Query: 185   ttgaagtgcgccagcgtgtgcgcccaccggatgtcctccttgagctggtgcacgccaatg 244
             ||||||||| |||| ||||| |||||||  | ||||| ||| ||||||||||| || |||
Sbjct: 71186 ttgaagtgctccagtgtgtgtgcccacctcaggtcctgcttcagctggtgcaccccgatg 71245

                                                                         
Query: 245   gcgtcctccaggaaatccttggcctgggcgcccttgtagtcgtacatcctggggaagatg 304
             | || ||||| ||| || |   | | ||| | ||||||||| ||||||||||||||||||
Sbjct: 71246 gtgttctccaagaagtcttcacctttggcactcttgtagtcatacatcctggggaagatg 71305

                                                   
Query: 305   ttaaccctgttcttggccttgccgccctcgttcagcca 342
             || |||| |||||||||||||  ||||  |||||||||
Sbjct: 71306 ttcacccggttcttggccttgtggcccatgttcagcca 71343



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                  
Query: 372   tggccttcctcctgaccatgtcggagtcggcgatcca 408
             |||||| |||||||||||||||||||  |||||||||
Sbjct: 71536 tggcctccctcctgaccatgtcggaggtggcgatcca 71572

>gb|AY664416.1| Zea mays cultivar Mo17 locus bz, complete sequence
          Length = 203581

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 129/158 (81%)
 Strand = Plus / Plus

                                                                         
Query: 185   ttgaagtgcgccagcgtgtgcgcccaccggatgtcctccttgagctggtgcacgccaatg 244
             ||||||||| |||| ||||| |||||||  | ||||| ||| ||||||||||| || |||
Sbjct: 55216 ttgaagtgctccagtgtgtgtgcccacctcaggtcctgcttcagctggtgcaccccgatg 55275

                                                                         
Query: 245   gcgtcctccaggaaatccttggcctgggcgcccttgtagtcgtacatcctggggaagatg 304
             | || ||||| ||| || |   | | ||| | ||||||||| ||||||||||||||||||
Sbjct: 55276 gtgttctccaagaagtcttcacctttggcactcttgtagtcatacatcctggggaagatg 55335

                                                   
Query: 305   ttaaccctgttcttggccttgccgccctcgttcagcca 342
             || |||| |||||||||||||  ||||  |||||||||
Sbjct: 55336 ttcacccggttcttggccttgtggcccatgttcagcca 55373



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                  
Query: 372   tggccttcctcctgaccatgtcggagtcggcgatcca 408
             |||||| |||||||||||||||||||  |||||||||
Sbjct: 55566 tggcctccctcctgaccatgtcggaggtggcgatcca 55602

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 95/116 (81%)
 Strand = Plus / Plus

                                                                           
Query: 227     agctggtgcacgccaatggcgtcctccaggaaatccttggcctgggcgcccttgtagtcg 286
               ||||||||||| ||||| | |||||||| ||| ||||  | || | | |||||| |||| 
Sbjct: 4664485 agctggtgcacaccaatagtgtcctccaagaagtcctctggcttgacacccttgaagtca 4664544

                                                                       
Query: 287     tacatcctggggaagatgttaaccctgttcttggccttgccgccctcgttcagcca 342
               |||||||| ||||| ||||| ||||| ||||||||||||  ||||  |||||||||
Sbjct: 4664545 tacatcctagggaaaatgttcaccctattcttggccttgttgcccatgttcagcca 4664600

>dbj|AP004738.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0090D06
          Length = 174500

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 95/116 (81%)
 Strand = Plus / Plus

                                                                          
Query: 227    agctggtgcacgccaatggcgtcctccaggaaatccttggcctgggcgcccttgtagtcg 286
              ||||||||||| ||||| | |||||||| ||| ||||  | || | | |||||| |||| 
Sbjct: 151849 agctggtgcacaccaatagtgtcctccaagaagtcctctggcttgacacccttgaagtca 151908

                                                                      
Query: 287    tacatcctggggaagatgttaaccctgttcttggccttgccgccctcgttcagcca 342
              |||||||| ||||| ||||| ||||| ||||||||||||  ||||  |||||||||
Sbjct: 151909 tacatcctagggaaaatgttcaccctattcttggccttgttgcccatgttcagcca 151964

>dbj|AP003514.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0698A06
          Length = 156514

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 95/116 (81%)
 Strand = Plus / Plus

                                                                         
Query: 227   agctggtgcacgccaatggcgtcctccaggaaatccttggcctgggcgcccttgtagtcg 286
             ||||||||||| ||||| | |||||||| ||| ||||  | || | | |||||| |||| 
Sbjct: 27084 agctggtgcacaccaatagtgtcctccaagaagtcctctggcttgacacccttgaagtca 27143

                                                                     
Query: 287   tacatcctggggaagatgttaaccctgttcttggccttgccgccctcgttcagcca 342
             |||||||| ||||| ||||| ||||| ||||||||||||  ||||  |||||||||
Sbjct: 27144 tacatcctagggaaaatgttcaccctattcttggccttgttgcccatgttcagcca 27199

>dbj|AK108798.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-151-C05, full
           insert sequence
          Length = 1204

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 95/116 (81%)
 Strand = Plus / Minus

                                                                       
Query: 227 agctggtgcacgccaatggcgtcctccaggaaatccttggcctgggcgcccttgtagtcg 286
           ||||||||||| ||||| | |||||||| ||| ||||  | || | | |||||| |||| 
Sbjct: 996 agctggtgcacaccaatagtgtcctccaagaagtcctctggcttgacacccttgaagtca 937

                                                                   
Query: 287 tacatcctggggaagatgttaaccctgttcttggccttgccgccctcgttcagcca 342
           |||||||| ||||| ||||| ||||| ||||||||||||  ||||  |||||||||
Sbjct: 936 tacatcctagggaaaatgttcaccctattcttggccttgttgcccatgttcagcca 881

>gb|AC105068.19| Mus musculus chromosome 5, clone RP23-445H19, complete sequence
          Length = 199878

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 375    ccttcctcctgaccatgtcggagtc 399
              |||||||||||||||||| ||||||
Sbjct: 100789 ccttcctcctgaccatgtgggagtc 100765

>gb|AC116118.16| Mus musculus chromosome 16, clone RP23-73P19, complete sequence
          Length = 128851

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 129   acatatgaatctatgagctcc 149
             |||||||||||||||||||||
Sbjct: 16987 acatatgaatctatgagctcc 17007

>emb|CT010490.10| Mouse DNA sequence from clone RP23-148P12 on chromosome 16, complete
             sequence
          Length = 206348

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 129   acatatgaatctatgagctcc 149
             |||||||||||||||||||||
Sbjct: 94271 acatatgaatctatgagctcc 94291

>ref|NM_117347.3| Arabidopsis thaliana unknown protein AT4G12780 mRNA, complete cds
          Length = 1878

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 21   tttaattaatgccaaatgtatcat 44
            |||||| |||||||||||||||||
Sbjct: 1604 tttaatgaatgccaaatgtatcat 1581

>gb|AC133214.3| Mus musculus BAC clone RP23-72A15 from chromosome 10, complete sequence
          Length = 157067

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 125   ttccacatatgaatctatga 144
             ||||||||||||||||||||
Sbjct: 96370 ttccacatatgaatctatga 96351

>gb|AC133604.3| Mus musculus BAC clone RP23-416F12 from chromosome 8, complete sequence
          Length = 221603

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     gtgaaactgctggatttcta 75
              ||||||||||||||||||||
Sbjct: 139897 gtgaaactgctggatttcta 139916

>gb|AC124415.4| Mus musculus BAC clone RP24-298J2 from chromosome 10, complete sequence
          Length = 160137

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 125    ttccacatatgaatctatga 144
              ||||||||||||||||||||
Sbjct: 125295 ttccacatatgaatctatga 125314

>ref|XM_648642.1| Entamoeba histolytica HM-1:IMSS WD repeat protein (74.t00033)
           partial mRNA
          Length = 1818

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 45  atcatatgcatgtgaaactgctgg 68
           ||||||||||| ||||||||||||
Sbjct: 351 atcatatgcatatgaaactgctgg 328

>gb|AC161054.3| Mus musculus BAC clone RP23-381H23 from chromosome 10, complete sequence
          Length = 202932

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 125    ttccacatatgaatctatga 144
              ||||||||||||||||||||
Sbjct: 193079 ttccacatatgaatctatga 193060

>emb|AL138767.15| Human DNA sequence from clone RP11-57C13 on chromosome 10 Contains the
             3' end of the MINPP gene for multiple inositol
             polyphosphate histidine phosphatase 1, three novel genes,
             a ribosomal protein S26 (RPS26) pseudogene, the 5' end of
             the PAPSS2 gene for 3'-phosphoadenosine 5'-phosphosulfate
             synthase 2 and a CpG island, complete sequence
          Length = 111645

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 86    ccttgagtgaggcagtttaa 105
             ||||||||||||||||||||
Sbjct: 39743 ccttgagtgaggcagtttaa 39762

>emb|AL939132.1|SCO939132 Streptomyces coelicolor A3(2) complete genome; segment 29/29
          Length = 302007

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 316    cttggccttgccgccctcgt 335
              ||||||||||||||||||||
Sbjct: 118598 cttggccttgccgccctcgt 118579

>emb|AL161534.2|ATCHRIV34 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 34
          Length = 196107

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 21     tttaattaatgccaaatgtatcat 44
              |||||| |||||||||||||||||
Sbjct: 188859 tttaatgaatgccaaatgtatcat 188836

>emb|AL049640.1|ATT20K18 Arabidopsis thaliana DNA chromosome 4, BAC clone  T20K18 (ESSA project)
          Length = 79375

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 21    tttaattaatgccaaatgtatcat 44
             |||||| |||||||||||||||||
Sbjct: 47247 tttaatgaatgccaaatgtatcat 47224

>gb|AC161579.4| Mus musculus chromosome 19, clone RP23-298M4, complete sequence
          Length = 188366

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 32    ccaaatgtatcatatcatat 51
             ||||||||||||||||||||
Sbjct: 44698 ccaaatgtatcatatcatat 44679

>gb|AC025105.10| Homo sapiens chromosome 18, clone RP11-695P1, complete sequence
          Length = 201027

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 119    caggtcttccacatatgaat 138
              ||||||||||||||||||||
Sbjct: 164828 caggtcttccacatatgaat 164809

>emb|AJ698386.1| Euplotes vannus macronuclear dynein light chain type 1, clone
           96(1).B4
          Length = 489

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 18  gtgtttaattaatgccaaat 37
           ||||||||||||||||||||
Sbjct: 372 gtgtttaattaatgccaaat 353

>gb|AY081334.1| Arabidopsis thaliana auxilin-like protein (At4g12780) mRNA, complete
            cds
          Length = 1876

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 21   tttaattaatgccaaatgtatcat 44
            |||||| |||||||||||||||||
Sbjct: 1603 tttaatgaatgccaaatgtatcat 1580

>gb|AC091602.6| Homo sapiens BAC clone RP11-655M19 from 4, complete sequence
          Length = 189458

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 107    tctggaaatttacaggtctt 126
              ||||||||||||||||||||
Sbjct: 128856 tctggaaatttacaggtctt 128837

>gb|AC017047.4|AC017047 Homo sapiens BAC clone RP11-323F10 from X, complete sequence
          Length = 180322

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     gaaactctggaatccagtgt 21
             ||||||||||||||||||||
Sbjct: 57586 gaaactctggaatccagtgt 57605

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 385      gaccatgtcggagtcggcga 404
                ||||||||||||||||||||
Sbjct: 20391004 gaccatgtcggagtcggcga 20390985

>gb|AC116003.7| Homo sapiens chromosome 18, clone RP11-321M21, complete sequence
          Length = 189167

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 119   caggtcttccacatatgaat 138
             ||||||||||||||||||||
Sbjct: 27241 caggtcttccacatatgaat 27222

>dbj|AP005682.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1531_B07
          Length = 115245

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 385   gaccatgtcggagtcggcga 404
             ||||||||||||||||||||
Sbjct: 19143 gaccatgtcggagtcggcga 19124


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,512,644
Number of Sequences: 3902068
Number of extensions: 3512644
Number of successful extensions: 68144
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 68049
Number of HSP's gapped (non-prelim): 90
length of query: 421
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 399
effective length of database: 17,147,199,772
effective search space: 6841732709028
effective search space used: 6841732709028
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)