Clone Name | rbart35c12 |
---|---|
Clone Library Name | barley_pub |
>KSG7_ARATH (Q39011) Shaggy-related protein kinase eta (EC 2.7.11.1) (ASK-eta)| (BRASSINOSTEROID-INSENSITIVE 2) (ULTRACURVATA1) Length = 380 Score = 38.5 bits (88), Expect = 0.011 Identities = 14/28 (50%), Positives = 24/28 (85%) Frame = -3 Query: 515 ELANVSQDLINRLVPEHVRRQAGLAFLH 432 E+A S +L+N+L+P+H++RQ GL+FL+ Sbjct: 349 EVAGSSPELVNKLIPDHIKRQLGLSFLN 376
>KSG6_ARATH (Q39010) Shaggy-related protein kinase dzeta (EC 2.7.11.1)| (ASK-dzeta) Length = 412 Score = 35.8 bits (81), Expect = 0.071 Identities = 16/26 (61%), Positives = 19/26 (73%) Frame = -3 Query: 515 ELANVSQDLINRLVPEHVRRQAGLAF 438 EL+ S +LINRL+PEHVRRQ F Sbjct: 381 ELSGASPELINRLIPEHVRRQMNGGF 406
>KSG9_ARATH (Q39012) Shaggy-related protein kinase iota (EC 2.7.11.1)| (ASK-iota) Length = 407 Score = 35.4 bits (80), Expect = 0.093 Identities = 15/21 (71%), Positives = 17/21 (80%) Frame = -3 Query: 515 ELANVSQDLINRLVPEHVRRQ 453 EL S +LINRL+PEHVRRQ Sbjct: 379 ELGGASMELINRLIPEHVRRQ 399
>CGAT2_HUMAN (Q8N6G5) Chondroitin beta-1,4-N-acetylgalactosaminyltransferase 2| (EC 2.4.1.174) (GalNAcT-2) (beta4GalNAcT-2) Length = 542 Score = 32.7 bits (73), Expect = 0.60 Identities = 20/75 (26%), Positives = 38/75 (50%) Frame = -3 Query: 515 ELANVSQDLINRLVPEHVRRQAGLAFLHAGS*ICTRVPSTLHLVVLPWAKGGGLRWRQVR 336 E+ ++++ +IN +VP R +A + F+ +C +HL V+ + K G +V+ Sbjct: 263 EMIDITRSIINIIVPLAERTEAFVQFMQNFRDVCIHQDKKIHLTVVYFGKEG---LSKVK 319 Query: 335 *SLE*YMPDSNYQKY 291 LE +SN+ Y Sbjct: 320 SILESVTSESNFHNY 334
>KSG10_ARATH (Q39019) Shaggy-related protein kinase kappa (EC 2.7.11.1)| (ASK-kappa) (AtK-1) Length = 421 Score = 32.7 bits (73), Expect = 0.60 Identities = 13/29 (44%), Positives = 20/29 (68%) Frame = -3 Query: 515 ELANVSQDLINRLVPEHVRRQAGLAFLHA 429 EL+ + +++NRLVPEH R+Q LH+ Sbjct: 393 ELSGIPPEIVNRLVPEHARKQNLFMALHS 421
>UBR1_CAEEL (P91133) Ubiquitin-protein ligase E3 component N-recognin (EC| 6.-.-.-) (Ubiquitin-protein ligase E3-alpha) Length = 1927 Score = 31.6 bits (70), Expect = 1.3 Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 5/67 (7%) Frame = +2 Query: 44 HQEWRTRQLTTYELVQYIKKLLTLTIGQKLKENSVHG-LRLCCFHLLNR----YTNPNDI 208 HQ W + T + ++ +K +++ IG VH L + C L+NR YT + Sbjct: 547 HQVWESEWETAFNILLRLKDAISMIIGWAETNEEVHNRLMIMCLELMNRMPPVYTKSEED 606 Query: 209 TTSLLNT 229 T L T Sbjct: 607 TYELTVT 613
>KSG4_ARATH (Q9FVS6) Shaggy-related protein kinase delta (EC 2.7.11.1)| (ASK-delta) Length = 420 Score = 30.4 bits (67), Expect = 3.0 Identities = 12/29 (41%), Positives = 19/29 (65%) Frame = -3 Query: 515 ELANVSQDLINRLVPEHVRRQAGLAFLHA 429 EL+ + + ++RLVPEH R+Q LH+ Sbjct: 392 ELSGIPPETVDRLVPEHARKQNHFMALHS 420
>YG41_SCHPO (O60176) Hypothetical RNA-binding protein C23E6.01c in chromosome| II Length = 473 Score = 30.4 bits (67), Expect = 3.0 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = -3 Query: 407 VPSTLHLVVLPWAKGGGLRWRQV 339 +P T HL L WA GGGLR + + Sbjct: 158 IPGTNHLFKLNWASGGGLREKSI 180
>CGAT2_MOUSE (Q8C1F4) Chondroitin beta-1,4-N-acetylgalactosaminyltransferase 2| (EC 2.4.1.174) (GalNAcT-2) (beta4GalNAcT-2) Length = 542 Score = 30.0 bits (66), Expect = 3.9 Identities = 20/75 (26%), Positives = 37/75 (49%) Frame = -3 Query: 515 ELANVSQDLINRLVPEHVRRQAGLAFLHAGS*ICTRVPSTLHLVVLPWAKGGGLRWRQVR 336 EL ++++ +IN +VP R +A F+ +C +HL V+ + K G +V+ Sbjct: 263 ELIDITRSVINIIVPLAERTEAFSQFMQNFRDVCIHQDKRIHLTVVYFGKEG---LSKVK 319 Query: 335 *SLE*YMPDSNYQKY 291 LE +S++ Y Sbjct: 320 SILESVSSESDFHNY 334
>CHIT_CAEEL (Q11174) Probable endochitinase (EC 3.2.1.14)| Length = 617 Score = 30.0 bits (66), Expect = 3.9 Identities = 16/75 (21%), Positives = 31/75 (41%) Frame = -1 Query: 502 FHKTSSTGLYLNMFADKLVSLSCMQGAKYAHGCPQPCTLLFCHXXXXXXXXXXXXXDPWS 323 + +++ GL++ + K S+SC G +Y+ +L +C P + Sbjct: 489 YPNSNNCGLFVLCLSSKSYSMSCPSGLQYS------ASLKYCTTSTASGCSVTTTRAPTT 542 Query: 322 DICQIPIIRSTGRAP 278 P + +T RAP Sbjct: 543 TTKSAPTVTTTTRAP 557
>GLMM_BARQU (Q6FYQ7) Phosphoglucosamine mutase (EC 5.4.2.10)| Length = 459 Score = 29.6 bits (65), Expect = 5.1 Identities = 12/26 (46%), Positives = 20/26 (76%) Frame = +3 Query: 429 CMQESETSLSANMFRYKPVDEVL*NI 506 CMQES++S+S R++PV ++L N+ Sbjct: 354 CMQESQSSMSHLCKRFEPVPQILKNV 379
>MOBB_BPT4 (P13329) Probable mobile endonuclease B| Length = 264 Score = 28.9 bits (63), Expect = 8.7 Identities = 11/20 (55%), Positives = 13/20 (65%) Frame = +2 Query: 269 VIPRCSTGTSDNWNLAYITP 328 +IPRC GT D NL +TP Sbjct: 33 IIPRCMGGTDDKTNLVLLTP 52 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 78,200,146 Number of Sequences: 219361 Number of extensions: 1716992 Number of successful extensions: 4253 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 4105 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4251 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3869946934 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)