Clone Name | rbart35c09 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK119933.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-184-A09, full insert sequence Length = 1094 Score = 819 bits (413), Expect = 0.0 Identities = 416/417 (99%) Strand = Plus / Minus Query: 31 gcgcgaaattatattttcacgagcaaacatgtacacaaacaaacacaaggcttggattca 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1094 gcgcgaaattatattttcacgagcaaacatgtacacaaacaaacacaaggcttggattca 1035 Query: 91 aggctagctacgagctagccatacactaacaaatggattcgccaccaccaccaggaccag 150 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1034 aggctagctacgagctagccatacactaacaaatggattcgccaccaccaccaggaccag 975 Query: 151 gtacgcacaacgagctggagtgccctcgtagatagcaccgtagttgactacacgtagttt 210 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 974 gtacgcacaacgagctggagtgccctcgtagatagcaccgtagttgactacacgtagttt 915 Query: 211 gtactccacaaacaaatacatcacgcgttcaagacaatcttgtcgcactgtccgacctcg 270 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 914 gtactccacaaacaaatacatcacgcgttcaagacaatcttgtcgcactgtccgacctcg 855 Query: 271 tcggccgacttgtcggcgccgtcgagcgggaagaagaaggggtacacctcgtagcgcgcc 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 854 tcggccgacttgtcggcgccgtcgagcgggaagaagaaggggtacacctcgtagcgcgcc 795 Query: 331 atgcagctgctgtagatcacgcggcacccgcgccggtaccggcagtagttgggcagctcg 390 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 794 atgcagctgctgtagatctcgcggcacccgcgccggtaccggcagtagttgggcagctcg 735 Query: 391 gccacagcctgcgccacgcacagcccgcagtcggccgccgtgatgtccctggtgcac 447 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 734 gccacagcctgcgccacgcacagcccgcagtcggccgccgtgatgtccctggtgcac 678
>ref|XM_475074.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 819 Score = 188 bits (95), Expect = 1e-44 Identities = 137/151 (90%) Strand = Plus / Minus Query: 287 cgccgtcgagcgggaagaagaaggggtacacctcgtagcgcgccatgcagctgctgtaga 346 |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| | Sbjct: 754 cgccgtcgagcgggaagaagaatgggtaggtctcgtagcgcgccatgcagctgctgtaca 695 Query: 347 tcacgcggcacccgcgccggtaccggcagtagttgggcagctcggccacagcctgcgcca 406 ||||||||| || |||||| | |||||||||||||||| ||| ||||| |||||||||| Sbjct: 694 gcacgcggcatcctcgccggaatcggcagtagttgggcatctccgccaccgcctgcgcca 635 Query: 407 cgcacagcccgcagtcggccgccgtgatgtc 437 |||||||||||||||| |||||||||||||| Sbjct: 634 cgcacagcccgcagtccgccgccgtgatgtc 604
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 188 bits (95), Expect = 1e-44 Identities = 137/151 (90%) Strand = Plus / Plus Query: 287 cgccgtcgagcgggaagaagaaggggtacacctcgtagcgcgccatgcagctgctgtaga 346 |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| | Sbjct: 659635 cgccgtcgagcgggaagaagaatgggtaggtctcgtagcgcgccatgcagctgctgtaca 659694 Query: 347 tcacgcggcacccgcgccggtaccggcagtagttgggcagctcggccacagcctgcgcca 406 ||||||||| || |||||| | |||||||||||||||| ||| ||||| |||||||||| Sbjct: 659695 gcacgcggcatcctcgccggaatcggcagtagttgggcatctccgccaccgcctgcgcca 659754 Query: 407 cgcacagcccgcagtcggccgccgtgatgtc 437 |||||||||||||||| |||||||||||||| Sbjct: 659755 cgcacagcccgcagtccgccgccgtgatgtc 659785
>dbj|AK108350.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-B11, full insert sequence Length = 1008 Score = 188 bits (95), Expect = 1e-44 Identities = 137/151 (90%) Strand = Plus / Minus Query: 287 cgccgtcgagcgggaagaagaaggggtacacctcgtagcgcgccatgcagctgctgtaga 346 |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| | Sbjct: 793 cgccgtcgagcgggaagaagaatgggtaggtctcgtagcgcgccatgcagctgctgtaca 734 Query: 347 tcacgcggcacccgcgccggtaccggcagtagttgggcagctcggccacagcctgcgcca 406 ||||||||| || |||||| | |||||||||||||||| ||| ||||| |||||||||| Sbjct: 733 gcacgcggcatcctcgccggaatcggcagtagttgggcatctccgccaccgcctgcgcca 674 Query: 407 cgcacagcccgcagtcggccgccgtgatgtc 437 |||||||||||||||| |||||||||||||| Sbjct: 673 cgcacagcccgcagtccgccgccgtgatgtc 643
>gb|AC093921.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0041A22, complete sequence Length = 117919 Score = 188 bits (95), Expect = 1e-44 Identities = 137/151 (90%) Strand = Plus / Plus Query: 287 cgccgtcgagcgggaagaagaaggggtacacctcgtagcgcgccatgcagctgctgtaga 346 |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| | Sbjct: 4834 cgccgtcgagcgggaagaagaatgggtaggtctcgtagcgcgccatgcagctgctgtaca 4893 Query: 347 tcacgcggcacccgcgccggtaccggcagtagttgggcagctcggccacagcctgcgcca 406 ||||||||| || |||||| | |||||||||||||||| ||| ||||| |||||||||| Sbjct: 4894 gcacgcggcatcctcgccggaatcggcagtagttgggcatctccgccaccgcctgcgcca 4953 Query: 407 cgcacagcccgcagtcggccgccgtgatgtc 437 |||||||||||||||| |||||||||||||| Sbjct: 4954 cgcacagcccgcagtccgccgccgtgatgtc 4984
>gb|L14835.1|MZEWUSB Zea mays (clone wusl1032) mRNA sequence Length = 943 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 288 gccgtcgagcgggaagaagaaggggtacacctcgtagcgcgccatgcagctgctgtag 345 |||| ||||||||||| |||||||||| | |||||||||| || |||||||||||||| Sbjct: 197 gccggcgagcgggaagtagaaggggtagatctcgtagcgcaccctgcagctgctgtag 254
>ref|XM_479982.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1156 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Minus Query: 292 tcgagcgggaagaagaaggggtacacctcgtagcgcgccatgcagctgctgta 344 ||||| |||||| |||||||||| | ||||||||||||| ||||||||||| Sbjct: 833 tcgagtgggaagtagaaggggtagatctcgtagcgcgcccaacagctgctgta 781
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Plus Query: 293 cgagcgggaagaagaaggggtacacctcgtagcgcgccatgcagctgctgtag 345 ||||||||||| ||||||| || | |||||||||| || ||||||| |||||| Sbjct: 9393992 cgagcgggaagtagaagggatagatctcgtagcgcaccctgcagctactgtag 9394044
>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0002D01, from chromosome 3, complete sequence Length = 187589 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Plus Query: 293 cgagcgggaagaagaaggggtacacctcgtagcgcgccatgcagctgctgtag 345 ||||||||||| ||||||| || | |||||||||| || ||||||| |||||| Sbjct: 91392 cgagcgggaagtagaagggatagatctcgtagcgcaccctgcagctactgtag 91444
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Plus Query: 292 tcgagcgggaagaagaaggggtacacctcgtagcgcgccatgcagctgctgta 344 ||||| |||||| |||||||||| | ||||||||||||| ||||||||||| Sbjct: 2057194 tcgagtgggaagtagaaggggtagatctcgtagcgcgcccaacagctgctgta 2057246
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Plus Query: 293 cgagcgggaagaagaaggggtacacctcgtagcgcgccatgcagctgctgtag 345 ||||||||||| ||||||| || | |||||||||| || ||||||| |||||| Sbjct: 9392113 cgagcgggaagtagaagggatagatctcgtagcgcaccctgcagctactgtag 9392165
>dbj|AP003896.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1613_G04 Length = 135357 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Plus Query: 292 tcgagcgggaagaagaaggggtacacctcgtagcgcgccatgcagctgctgta 344 ||||| |||||| |||||||||| | ||||||||||||| ||||||||||| Sbjct: 50724 tcgagtgggaagtagaaggggtagatctcgtagcgcgcccaacagctgctgta 50776
>dbj|AP005620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0680F05 Length = 185495 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Plus Query: 292 tcgagcgggaagaagaaggggtacacctcgtagcgcgccatgcagctgctgta 344 ||||| |||||| |||||||||| | ||||||||||||| ||||||||||| Sbjct: 182392 tcgagtgggaagtagaaggggtagatctcgtagcgcgcccaacagctgctgta 182444
>dbj|AK073888.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075I11, full insert sequence Length = 1156 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Minus Query: 292 tcgagcgggaagaagaaggggtacacctcgtagcgcgccatgcagctgctgta 344 ||||| |||||| |||||||||| | ||||||||||||| ||||||||||| Sbjct: 833 tcgagtgggaagtagaaggggtagatctcgtagcgcgcccaacagctgctgta 781
>dbj|AK061425.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-G05, full insert sequence Length = 1133 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Minus Query: 293 cgagcgggaagaagaaggggtacacctcgtagcgcgccatgcagctgctgtag 345 ||||||||||| ||||||| || | |||||||||| || ||||||| |||||| Sbjct: 825 cgagcgggaagtagaagggatagatctcgtagcgcaccctgcagctactgtag 773
>gb|AF097724.1|AF097724 Oryza sativa 33-kDa secretory protein mRNA, complete cds Length = 1179 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Minus Query: 292 tcgagcgggaagaagaaggggtacacctcgtagcgcgccatgcagctgctgta 344 ||||| |||||| |||||||||| | ||||||||||||| ||||||||||| Sbjct: 814 tcgagtgggaagtagaaggggtagatctcgtagcgcgcccaacagctgctgta 762
>gb|AF093570.1|AF093570 Oryza sativa 33 kDa secretory protein mRNA, complete cds Length = 1106 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Minus Query: 292 tcgagcgggaagaagaaggggtacacctcgtagcgcgccatgcagctgctgta 344 ||||| |||||| |||||||||| | ||||||||||||| ||||||||||| Sbjct: 828 tcgagtgggaagtagaaggggtagatctcgtagcgcgcccaacagctgctgta 776
>gb|AF090872.1|AF090872 Oryza sativa 33 kDa secretory protein mRNA, complete cds Length = 1025 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Minus Query: 292 tcgagcgggaagaagaaggggtacacctcgtagcgcgccatgcagctgctgta 344 ||||| |||||| |||||||||| | ||||||||||||| ||||||||||| Sbjct: 824 tcgagtgggaagtagaaggggtagatctcgtagcgcgcccaacagctgctgta 772
>gb|AC164300.3| Mus musculus BAC clone RP23-310J6 from chromosome 8, complete sequence Length = 200605 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Plus Query: 55 aaacatgtacacaaacaaacaca 77 ||||||||||||||||||||||| Sbjct: 87422 aaacatgtacacaaacaaacaca 87444
>emb|BX088709.6| Zebrafish DNA sequence from clone CH211-15J21 in linkage group 15, complete sequence Length = 156236 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Plus Query: 55 aaacatgtacacaaacaaacaca 77 ||||||||||||||||||||||| Sbjct: 99303 aaacatgtacacaaacaaacaca 99325
>gb|AC132449.4| Mus musculus BAC clone RP23-183J18 from 8, complete sequence Length = 206312 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Minus Query: 55 aaacatgtacacaaacaaacaca 77 ||||||||||||||||||||||| Sbjct: 42393 aaacatgtacacaaacaaacaca 42371
>gb|AC129942.7| Mus musculus chromosome 8, clone RP23-267A22, complete sequence Length = 175030 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 52 agcaaacatgtacacaaacaaacaca 77 |||| ||||||||||||||||||||| Sbjct: 83431 agcatacatgtacacaaacaaacaca 83456
>gb|AC157789.5| Mus musculus chromosome 8, clone RP24-95E2, complete sequence Length = 203403 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 52 agcaaacatgtacacaaacaaacaca 77 |||| ||||||||||||||||||||| Sbjct: 201634 agcatacatgtacacaaacaaacaca 201609
>gb|AC091861.3| Homo sapiens chromosome 5 clone CTD-2339B8, complete sequence Length = 39248 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 56 aacatgtacacaaacaaacaca 77 |||||||||||||||||||||| Sbjct: 17617 aacatgtacacaaacaaacaca 17596
>gb|AC026698.6| Homo sapiens chromosome 5 clone CTC-457H17, complete sequence Length = 192731 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 56 aacatgtacacaaacaaacaca 77 |||||||||||||||||||||| Sbjct: 186935 aacatgtacacaaacaaacaca 186914
>gb|AC155814.6| Mus musculus BAC clone RP24-137M22 from chromosome 8, complete sequence Length = 191336 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 52 agcaaacatgtacacaaacaaacaca 77 |||| ||||||||||||||||||||| Sbjct: 181507 agcatacatgtacacaaacaaacaca 181532
>gb|AY728087.1| Taricha granulosa ORL1-like opioid receptor mRNA, complete cds Length = 1120 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 130 cgccaccaccaccaggaccagg 151 |||||||||||||||||||||| Sbjct: 810 cgccaccaccaccaggaccagg 789
>gb|AC005406.2| Homo sapiens clone b128f11, complete sequence Length = 226345 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 56 aacatgtacacaaacaaacaca 77 |||||||||||||||||||||| Sbjct: 5791 aacatgtacacaaacaaacaca 5812
>gb|AC153872.2| Mus musculus 6 BAC RP23-226O20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 203418 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 57 acatgtacacaaacaaacacaa 78 |||||||||||||||||||||| Sbjct: 65927 acatgtacacaaacaaacacaa 65906
>ref|XM_528133.1| PREDICTED: Pan troglodytes similar to opioid receptor, kappa 1; Opiate receptor, kappa-1 (LOC472761), mRNA Length = 2559 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 130 cgccaccaccaccaggaccag 150 ||||||||||||||||||||| Sbjct: 2259 cgccaccaccaccaggaccag 2239
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 289 ccgtcgagcgggaagaagaag 309 ||||||||||||||||||||| Sbjct: 2617991 ccgtcgagcgggaagaagaag 2618011
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 289 ccgtcgagcgggaagaagaag 309 ||||||||||||||||||||| Sbjct: 3830329 ccgtcgagcgggaagaagaag 3830349
>gb|AC004907.3| Homo sapiens PAC clone RP5-853H20 from 7, complete sequence Length = 130117 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 gtacacaaacaaacacaaggc 81 ||||||||||||||||||||| Sbjct: 44784 gtacacaaacaaacacaaggc 44804
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 289 ccgtcgagcgggaagaagaag 309 ||||||||||||||||||||| Sbjct: 3570676 ccgtcgagcgggaagaagaag 3570696
>emb|AL954251.1| Pan troglodytes chromosome 22 clone PTB-044H21 map 22q22.3, complete sequence Length = 149587 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 123 atggattcgccaccaccacca 143 ||||||||||||||||||||| Sbjct: 91235 atggattcgccaccaccacca 91215
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 236 cgttcaagacaatcttgtcgc 256 ||||||||||||||||||||| Sbjct: 1884242 cgttcaagacaatcttgtcgc 1884262
>gb|AY664419.1| Zea mays cultivar Mo17 locus 9009, complete sequence Length = 405672 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 291 gtcgagcgggaagaagaaggg 311 ||||||||||||||||||||| Sbjct: 337203 gtcgagcgggaagaagaaggg 337183
>emb|AL929204.7| Zebrafish DNA sequence from clone CH211-138E4, complete sequence Length = 157519 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 57 acatgtacacaaacaaacaca 77 ||||||||||||||||||||| Sbjct: 25675 acatgtacacaaacaaacaca 25655
>emb|AL845499.9| Mouse DNA sequence from clone RP23-232A21 on chromosome 2, complete sequence Length = 151923 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 aaacatgtacacaaacaaaca 75 ||||||||||||||||||||| Sbjct: 123420 aaacatgtacacaaacaaaca 123440
>gb|U11053.1|HSU11053 Human kappa opioid receptor (hKOR) mRNA, complete cds Length = 1182 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 130 cgccaccaccaccaggaccag 150 ||||||||||||||||||||| Sbjct: 856 cgccaccaccaccaggaccag 836
>gb|AC160127.2| Mus musculus BAC clone RP23-295O2 from chromosome 9, complete sequence Length = 205289 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 54 caaacatgtacacaaacaaacaca 77 |||||||||||||| ||||||||| Sbjct: 3678 caaacatgtacacacacaaacaca 3701
>ref|NM_187099.1| Oryza sativa (japonica cultivar-group), mRNA Length = 789 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 cgccgtcgagcgggaagaag 306 |||||||||||||||||||| Sbjct: 265 cgccgtcgagcgggaagaag 246
>ref|XM_476361.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1618 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 407 cgcacagcccgcagtcggcc 426 |||||||||||||||||||| Sbjct: 1209 cgcacagcccgcagtcggcc 1228
>ref|XM_506132.1| PREDICTED Oryza sativa (japonica cultivar-group), B1026C12.35 mRNA Length = 1642 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 407 cgcacagcccgcagtcggcc 426 |||||||||||||||||||| Sbjct: 1209 cgcacagcccgcagtcggcc 1228
>gb|BC099912.1| Homo sapiens opioid receptor, kappa 1, mRNA (cDNA clone MGC:104656 IMAGE:30531690), complete cds Length = 4943 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 gccaccaccaccaggaccag 150 |||||||||||||||||||| Sbjct: 1053 gccaccaccaccaggaccag 1034
>ref|NM_000912.3| Homo sapiens opioid receptor, kappa 1 (OPRK1), mRNA Length = 4959 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 gccaccaccaccaggaccag 150 |||||||||||||||||||| Sbjct: 1077 gccaccaccaccaggaccag 1058
>gb|AC113095.14| Mus musculus chromosome 9, clone RP23-311A1, complete sequence Length = 205429 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 54 caaacatgtacacaaacaaacaca 77 |||||||||||||| ||||||||| Sbjct: 170438 caaacatgtacacacacaaacaca 170461
>emb|Z68338.1|CET24B8 Caenorhabditis elegans Cosmid T24B8, complete sequence Length = 38779 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 ccaccaccaccaggaccagg 151 |||||||||||||||||||| Sbjct: 19675 ccaccaccaccaggaccagg 19656
>emb|Y10124.2|TTNARZYWV Thermus thermophilus nar operon (narCGHIJK genes) Length = 10622 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 accaccaccaggaccaggta 153 |||||||||||||||||||| Sbjct: 7564 accaccaccaggaccaggta 7545
>emb|AL591979.1| Listeria monocytogenes strain EGD, complete genome, segment 7/12 Length = 240050 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 cgccaccaccaccaggacca 149 |||||||||||||||||||| Sbjct: 126352 cgccaccaccaccaggacca 126371
>emb|AJ132396.1|KPN132396 Klebsiella pneumoniae D partial gmhD, waaF and waaC genes and partial ORFX, strain 889/50 Length = 2928 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 agctcggccacagcctgcgc 404 |||||||||||||||||||| Sbjct: 696 agctcggccacagcctgcgc 715
>emb|BX323467.8| Zebrafish DNA sequence from clone DKEY-48N15, complete sequence Length = 116326 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 ttgtactccacaaacaaata 228 |||||||||||||||||||| Sbjct: 107057 ttgtactccacaaacaaata 107076
>gb|AC009646.12| Homo sapiens chromosome 8, clone RP11-162D9, complete sequence Length = 183519 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 gccaccaccaccaggaccag 150 |||||||||||||||||||| Sbjct: 110957 gccaccaccaccaggaccag 110976
>gb|AF498922.1| Homo sapiens opioid receptor kappa (OPRK1) mRNA, complete cds Length = 1143 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 gccaccaccaccaggaccag 150 |||||||||||||||||||| Sbjct: 842 gccaccaccaccaggaccag 823
>ref|NM_134474.4| Drosophila melanogaster CG32532-RA (CG32532), mRNA Length = 4422 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 ccaccaccaccaggaccagg 151 |||||||||||||||||||| Sbjct: 1325 ccaccaccaccaggaccagg 1306
>gb|AC011071.12|AC011071 Drosophila melanogaster, chromosome X, region 18C-18D, BAC clone BACR27L16, complete sequence Length = 182623 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 ccaccaccaccaggaccagg 151 |||||||||||||||||||| Sbjct: 147511 ccaccaccaccaggaccagg 147530
>gb|AY823268.1| Klebsiella pneumoniae strain 52145 waa gene cluster, partial sequence Length = 14397 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 agctcggccacagcctgcgc 404 |||||||||||||||||||| Sbjct: 1301 agctcggccacagcctgcgc 1320
>ref|NM_063535.1| Caenorhabditis elegans T24B8.4 (T24B8.4) mRNA, complete cds Length = 2745 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 ccaccaccaccaggaccagg 151 |||||||||||||||||||| Sbjct: 286 ccaccaccaccaggaccagg 305
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 gtcgagcgggaagaagaagg 310 |||||||||||||||||||| Sbjct: 13469827 gtcgagcgggaagaagaagg 13469808
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 cgccgtcgagcgggaagaag 306 |||||||||||||||||||| Sbjct: 15383126 cgccgtcgagcgggaagaag 15383107 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 aacatgtacacaaacaaaca 75 |||||||||||||||||||| Sbjct: 13385155 aacatgtacacaaacaaaca 13385174 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 407 cgcacagcccgcagtcggcc 426 |||||||||||||||||||| Sbjct: 154315 cgcacagcccgcagtcggcc 154296
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 gtcgagcgggaagaagaagg 310 |||||||||||||||||||| Sbjct: 19810707 gtcgagcgggaagaagaagg 19810726
>gb|AC010847.11|AC010847 Drosophila melanogaster, chromosome X, region 18D-18D, BAC clone BACR10M08, complete sequence Length = 180213 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 ccaccaccaccaggaccagg 151 |||||||||||||||||||| Sbjct: 85991 ccaccaccaccaggaccagg 86010
>gb|AC092964.8| Homo sapiens 3 BAC RP11-423E7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 114995 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 atgtacacaaacaaacacaa 78 |||||||||||||||||||| Sbjct: 48454 atgtacacaaacaaacacaa 48435
>dbj|AP003516.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0047D12 Length = 145981 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 gtcgagcgggaagaagaagg 310 |||||||||||||||||||| Sbjct: 33665 gtcgagcgggaagaagaagg 33684
>gb|AY168006.1| Homo sapiens DRG kappa 1 splice variant KOR 1A mRNA, complete cds, alternatively spliced Length = 1396 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 gccaccaccaccaggaccag 150 |||||||||||||||||||| Sbjct: 1036 gccaccaccaccaggaccag 1017
>dbj|AP003802.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1047_A06 Length = 111673 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 cgccgtcgagcgggaagaag 306 |||||||||||||||||||| Sbjct: 90125 cgccgtcgagcgggaagaag 90106
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ctgtccgacctcgtcggccg 277 |||||||||||||||||||| Sbjct: 6086637 ctgtccgacctcgtcggccg 6086618
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 gtcggcgccgtcgagcggga 301 |||||||||||||||||||| Sbjct: 3192722 gtcggcgccgtcgagcggga 3192741
>dbj|AP003745.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1123_B01 Length = 105736 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 aacatgtacacaaacaaaca 75 |||||||||||||||||||| Sbjct: 99593 aacatgtacacaaacaaaca 99612
>dbj|AP005869.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1026C12 Length = 170240 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 407 cgcacagcccgcagtcggcc 426 |||||||||||||||||||| Sbjct: 153614 cgcacagcccgcagtcggcc 153595
>emb|Y10904.1|CCMUOPI C.commersoni mRNA for mu opioid receptor Length = 1231 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 cgccaccaccaccaggacca 149 |||||||||||||||||||| Sbjct: 888 cgccaccaccaccaggacca 869
>dbj|AP004349.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0684A03 Length = 64705 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 aacatgtacacaaacaaaca 75 |||||||||||||||||||| Sbjct: 10914 aacatgtacacaaacaaaca 10933
>dbj|AK100796.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121F13, full insert sequence Length = 1641 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 407 cgcacagcccgcagtcggcc 426 |||||||||||||||||||| Sbjct: 1208 cgcacagcccgcagtcggcc 1227
>dbj|AK100327.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079N22, full insert sequence Length = 1617 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 407 cgcacagcccgcagtcggcc 426 |||||||||||||||||||| Sbjct: 1208 cgcacagcccgcagtcggcc 1227
>emb|CR954167.21| Zebrafish DNA sequence from clone CH211-122N14 in linkage group 8, complete sequence Length = 160594 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 atgtacacaaacaaacacaa 78 |||||||||||||||||||| Sbjct: 50940 atgtacacaaacaaacacaa 50921
>gb|AE003512.3| Drosophila melanogaster chromosome X, section 64 of 74 of the complete sequence Length = 346474 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 ccaccaccaccaggaccagg 151 |||||||||||||||||||| Sbjct: 191757 ccaccaccaccaggaccagg 191776
>gb|U17298.1|HSU17298 Human kappa opioid receptor (hKOR) mRNA, complete cds Length = 1154 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 gccaccaccaccaggaccag 150 |||||||||||||||||||| Sbjct: 842 gccaccaccaccaggaccag 823
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 gtcgagcgggaagaagaagg 310 |||||||||||||||||||| Sbjct: 13424101 gtcgagcgggaagaagaagg 13424082
>emb|AL731758.4|CNS08C87 Oryza sativa chromosome 12, . BAC OSJNBa0029K06 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 154442 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 gtcgagcgggaagaagaagg 310 |||||||||||||||||||| Sbjct: 115412 gtcgagcgggaagaagaagg 115431
>gb|AC124711.3| Mus musculus BAC clone RP24-100M12 from 12, complete sequence Length = 225134 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 atgtacacaaacaaacacaa 78 |||||||||||||||||||| Sbjct: 198967 atgtacacaaacaaacacaa 198986
>emb|AL683800.9| Mouse DNA sequence from clone RP23-405B8 on chromosome X, complete sequence Length = 198175 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 54 caaacatgtacacaaacaaacaca 77 |||||||| ||||||||||||||| Sbjct: 110773 caaacatgcacacaaacaaacaca 110796
>gb|U04092.1|CPU04092 Cavia porcellus Hartley kappa opioid receptor mRNA, complete cds Length = 1733 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 gccaccaccaccaggaccag 150 |||||||||||||||||||| Sbjct: 1081 gccaccaccaccaggaccag 1062
>gb|L37362.1|HUMOPRK1B Homo sapiens (clone d2-115) kappa opioid receptor (OPRK1) mRNA, complete cds Length = 1604 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 gccaccaccaccaggaccag 150 |||||||||||||||||||| Sbjct: 1219 gccaccaccaccaggaccag 1200 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,714,853 Number of Sequences: 3902068 Number of extensions: 4714853 Number of successful extensions: 100405 Number of sequences better than 10.0: 83 Number of HSP's better than 10.0 without gapping: 85 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 99584 Number of HSP's gapped (non-prelim): 821 length of query: 447 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 425 effective length of database: 17,147,199,772 effective search space: 7287559903100 effective search space used: 7287559903100 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)