ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart35c03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AC147462.2| Oryza sativa (japonica cultivar-group) chromosome... 165 2e-37
2dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 165 2e-37
3dbj|AK102786.1| Oryza sativa (japonica cultivar-group) cDNA clon... 165 2e-37
4dbj|AK072962.1| Oryza sativa (japonica cultivar-group) cDNA clon... 165 2e-37
5dbj|AK059585.1| Oryza sativa (japonica cultivar-group) cDNA clon... 165 2e-37
6gb|BT017572.1| Zea mays clone EL01N0426H04.c mRNA sequence 141 3e-30
7gb|AY111974.1| Zea mays CL5031_1 mRNA sequence 141 3e-30
8ref|XM_654728.1| Aspergillus nidulans FGSC A4 hypothetical prote... 46 0.11
9emb|CR759753.9| Zebrafish DNA sequence from clone DKEY-11G15 in ... 42 1.7
10emb|CR407581.9| Zebrafish DNA sequence from clone DKEY-17A16 in ... 42 1.7
11emb|CR790377.18| Zebrafish DNA sequence from clone CH211-260M3 i... 42 1.7
12emb|BX324005.11| Zebrafish DNA sequence from clone DKEY-115F6 in... 42 1.7
13emb|BX649536.8| Zebrafish DNA sequence from clone DKEY-21N8 in l... 42 1.7
14emb|CR933841.5| Zebrafish DNA sequence from clone CH211-178N14 i... 42 1.7
15emb|AL844883.15| Zebrafish DNA sequence from clone DKEY-3J22 in ... 42 1.7
16emb|BX072581.5| Zebrafish DNA sequence from clone DKEY-14K7 in l... 42 1.7
17ref|XM_482631.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.8
18emb|CR318593.15| Zebrafish DNA sequence from clone CH211-160O17 ... 40 6.8
19ref|XM_449846.1| Candida glabrata CBS138 hypothetical protein (C... 40 6.8
20gb|BC046839.1| Xenopus laevis polo-like kinase (Drosophila), mRN... 40 6.8
21emb|AL512654.9| Human DNA sequence from clone RP11-92P6 on chrom... 40 6.8
22emb|AL133331.27| Human DNA sequence from clone RP11-157E14 on ch... 40 6.8
23emb|CR380959.1| Candida glabrata strain CBS138 chromosome M comp... 40 6.8
24gb|AE012436.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 6.8
25gb|DQ377418.1| Uncultured ectomycorrhiza (Thelephoraceae) isolat... 40 6.8
26gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 40 6.8
27dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
28gb|AF208204.1| Gilia cana internal transcribed spacer 1, partial... 40 6.8
29dbj|AP004703.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
30dbj|AP004764.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
31dbj|AK073494.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.8
32dbj|AK066840.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.8
33emb|BX004834.13| Zebrafish DNA sequence from clone CH211-42E22 i... 40 6.8
34gb|U58205.1|XLU58205 Xenopus laevis Plx1 mRNA, complete cds 40 6.8
35dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 6.8
36gb|AC171205.1| Mus musculus BAC clone RP23-441H20 from chromosom... 40 6.8
37emb|AL671909.8| Mouse DNA sequence from clone RP23-446F20 on chr... 40 6.8

>gb|AC147462.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1110B01,
            complete sequence
          Length = 160142

 Score =  165 bits (83), Expect = 2e-37
 Identities = 188/223 (84%)
 Strand = Plus / Plus

                                                                        
Query: 275  gcacgaatccgtccgcttgcgagcccggccgtcagctcctccacctctaccttcagcacg 334
            ||||||||||  || || || ||||| || ||||| |||||||| || || |||||||| 
Sbjct: 5829 gcacgaatcctgccactcgccagcccagcagtcaggtcctccacttccactttcagcaca 5888

                                                                        
Query: 335  tctcggcggttgccaatgtcacctgcatacctgctaacacagtacaccccgacagccatc 394
            ||||| ||||||||||||||| |||| ||||||||  | || |||||||| || ||||||
Sbjct: 5889 tctcgccggttgccaatgtcagctgcgtacctgctggcgcaatacaccccaactgccatc 5948

                                                                        
Query: 395  actgccattccgtagatgttcgtggtgactaggcggaaaggcgtcgaaaccacagcagca 454
            || |||||||| ||||| |||||||| ||||||||||| || || |||| ||| ||||||
Sbjct: 5949 accgccattccatagatattcgtggttactaggcggaatggggttgaaatcaccgcagca 6008

                                                       
Query: 455  agaggaccgccaatgatggagacagcctgcccactctgcccga 497
            ||||| || || ||||||||||  |||||||||||||||||||
Sbjct: 6009 agaggtccaccgatgatggagatggcctgcccactctgcccga 6051



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  165 bits (83), Expect = 2e-37
 Identities = 188/223 (84%)
 Strand = Plus / Plus

                                                                            
Query: 275      gcacgaatccgtccgcttgcgagcccggccgtcagctcctccacctctaccttcagcacg 334
                ||||||||||  || || || ||||| || ||||| |||||||| || || |||||||| 
Sbjct: 21412746 gcacgaatcctgccactcgccagcccagcagtcaggtcctccacttccactttcagcaca 21412805

                                                                            
Query: 335      tctcggcggttgccaatgtcacctgcatacctgctaacacagtacaccccgacagccatc 394
                ||||| ||||||||||||||| |||| ||||||||  | || |||||||| || ||||||
Sbjct: 21412806 tctcgccggttgccaatgtcagctgcgtacctgctggcgcaatacaccccaactgccatc 21412865

                                                                            
Query: 395      actgccattccgtagatgttcgtggtgactaggcggaaaggcgtcgaaaccacagcagca 454
                || |||||||| ||||| |||||||| ||||||||||| || || |||| ||| ||||||
Sbjct: 21412866 accgccattccatagatattcgtggttactaggcggaatggggttgaaatcaccgcagca 21412925

                                                           
Query: 455      agaggaccgccaatgatggagacagcctgcccactctgcccga 497
                ||||| || || ||||||||||  |||||||||||||||||||
Sbjct: 21412926 agaggtccaccgatgatggagatggcctgcccactctgcccga 21412968



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>dbj|AK102786.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107M16, full
            insert sequence
          Length = 2802

 Score =  165 bits (83), Expect = 2e-37
 Identities = 188/223 (84%)
 Strand = Plus / Minus

                                                                        
Query: 275  gcacgaatccgtccgcttgcgagcccggccgtcagctcctccacctctaccttcagcacg 334
            ||||||||||  || || || ||||| || ||||| |||||||| || || |||||||| 
Sbjct: 2271 gcacgaatcctgccactcgccagcccagcagtcaggtcctccacttccactttcagcaca 2212

                                                                        
Query: 335  tctcggcggttgccaatgtcacctgcatacctgctaacacagtacaccccgacagccatc 394
            ||||| ||||||||||||||| |||| ||||||||  | || |||||||| || ||||||
Sbjct: 2211 tctcgccggttgccaatgtcagctgcgtacctgctggcgcaatacaccccaactgccatc 2152

                                                                        
Query: 395  actgccattccgtagatgttcgtggtgactaggcggaaaggcgtcgaaaccacagcagca 454
            || |||||||| ||||| |||||||| ||||||||||| || || |||| ||| ||||||
Sbjct: 2151 accgccattccatagatattcgtggttactaggcggaatggggttgaaatcaccgcagca 2092

                                                       
Query: 455  agaggaccgccaatgatggagacagcctgcccactctgcccga 497
            ||||| || || ||||||||||  |||||||||||||||||||
Sbjct: 2091 agaggtccaccgatgatggagatggcctgcccactctgcccga 2049



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>dbj|AK072962.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149P14, full
           insert sequence
          Length = 1352

 Score =  165 bits (83), Expect = 2e-37
 Identities = 188/223 (84%)
 Strand = Plus / Minus

                                                                       
Query: 275 gcacgaatccgtccgcttgcgagcccggccgtcagctcctccacctctaccttcagcacg 334
           ||||||||||  || || || ||||| || ||||| |||||||| || || |||||||| 
Sbjct: 826 gcacgaatcctgccactcgccagcccagcagtcaggtcctccacttccactttcagcaca 767

                                                                       
Query: 335 tctcggcggttgccaatgtcacctgcatacctgctaacacagtacaccccgacagccatc 394
           ||||| ||||||||||||||| |||| ||||||||  | || |||||||| || ||||||
Sbjct: 766 tctcgccggttgccaatgtcagctgcgtacctgctggcgcaatacaccccaactgccatc 707

                                                                       
Query: 395 actgccattccgtagatgttcgtggtgactaggcggaaaggcgtcgaaaccacagcagca 454
           || |||||||| ||||| |||||||| ||||||||||| || || |||| ||| ||||||
Sbjct: 706 accgccattccatagatattcgtggttactaggcggaatggggttgaaatcaccgcagca 647

                                                      
Query: 455 agaggaccgccaatgatggagacagcctgcccactctgcccga 497
           ||||| || || ||||||||||  |||||||||||||||||||
Sbjct: 646 agaggtccaccgatgatggagatggcctgcccactctgcccga 604



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>dbj|AK059585.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-B09, full
           insert sequence
          Length = 1209

 Score =  165 bits (83), Expect = 2e-37
 Identities = 188/223 (84%)
 Strand = Plus / Minus

                                                                       
Query: 275 gcacgaatccgtccgcttgcgagcccggccgtcagctcctccacctctaccttcagcacg 334
           ||||||||||  || || || ||||| || ||||| |||||||| || || |||||||| 
Sbjct: 897 gcacgaatcctgccactcgccagcccagcagtcaggtcctccacttccactttcagcaca 838

                                                                       
Query: 335 tctcggcggttgccaatgtcacctgcatacctgctaacacagtacaccccgacagccatc 394
           ||||| ||||||||||||||| |||| ||||||||  | || |||||||| || ||||||
Sbjct: 837 tctcgccggttgccaatgtcagctgcgtacctgctggcgcaatacaccccaactgccatc 778

                                                                       
Query: 395 actgccattccgtagatgttcgtggtgactaggcggaaaggcgtcgaaaccacagcagca 454
           || |||||||| ||||| |||||||| ||||||||||| || || |||| ||| ||||||
Sbjct: 777 accgccattccatagatattcgtggttactaggcggaatggggttgaaatcaccgcagca 718

                                                      
Query: 455 agaggaccgccaatgatggagacagcctgcccactctgcccga 497
           ||||| || || ||||||||||  |||||||||||||||||||
Sbjct: 717 agaggtccaccgatgatggagatggcctgcccactctgcccga 675



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>gb|BT017572.1| Zea mays clone EL01N0426H04.c mRNA sequence
          Length = 1092

 Score =  141 bits (71), Expect = 3e-30
 Identities = 167/199 (83%)
 Strand = Plus / Plus

                                                                       
Query: 299 ccggccgtcagctcctccacctctaccttcagcacgtctcggcggttgccaatgtcacct 358
           ||||||||||| ||||| || || |  |||| ||| || |||||||||||||| ||| ||
Sbjct: 359 ccggccgtcaggtcctcgacttccattttcaccacatcacggcggttgccaatatcagct 418

                                                                       
Query: 359 gcatacctgctaacacagtacaccccgacagccatcactgccattccgtagatgttcgtg 418
           |||||||||||  | |||||||||||||| |||||||| ||||| || ||||||||||||
Sbjct: 419 gcatacctgctcgcgcagtacaccccgacggccatcaccgccatcccatagatgttcgtg 478

                                                                       
Query: 419 gtgactaggcggaaaggcgtcgaaaccacagcagcaagaggaccgccaatgatggagaca 478
           || || | |||||| || ||||| ||||| || || ||||| || || |||||||||| |
Sbjct: 479 gtaaccaagcggaatggggtcgagaccaccgcggcgagaggtccaccgatgatggagata 538

                              
Query: 479 gcctgcccactctgcccga 497
           |||||||| ||||||||||
Sbjct: 539 gcctgcccgctctgcccga 557



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>gb|AY111974.1| Zea mays CL5031_1 mRNA sequence
          Length = 1143

 Score =  141 bits (71), Expect = 3e-30
 Identities = 167/199 (83%)
 Strand = Plus / Minus

                                                                       
Query: 299 ccggccgtcagctcctccacctctaccttcagcacgtctcggcggttgccaatgtcacct 358
           ||||||||||| ||||| || || |  |||| ||| || |||||||||||||| ||| ||
Sbjct: 796 ccggccgtcaggtcctcgacttccattttcaccacatcacggcggttgccaatatcagct 737

                                                                       
Query: 359 gcatacctgctaacacagtacaccccgacagccatcactgccattccgtagatgttcgtg 418
           |||||||||||  | |||||||||||||| |||||||| ||||| || ||||||||||||
Sbjct: 736 gcatacctgctcgcgcagtacaccccgacggccatcaccgccatcccatagatgttcgtg 677

                                                                       
Query: 419 gtgactaggcggaaaggcgtcgaaaccacagcagcaagaggaccgccaatgatggagaca 478
           || || | |||||| || ||||| ||||| || || ||||| || || |||||||||| |
Sbjct: 676 gtaaccaagcggaatggggtcgagaccaccgcggcgagaggtccaccgatgatggagata 617

                              
Query: 479 gcctgcccactctgcccga 497
           |||||||| ||||||||||
Sbjct: 616 gcctgcccgctctgcccga 598



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>ref|XM_654728.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN2216.2), mRNA
          Length = 1626

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 313  ctccacctctaccttcagcacgtctcg 339
            ||||||||||||| |||||||||||||
Sbjct: 1504 ctccacctctaccctcagcacgtctcg 1478



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>emb|CR759753.9| Zebrafish DNA sequence from clone DKEY-11G15 in linkage group 7, complete
              sequence
          Length = 203801

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 156    atggtgatgtatacatctcca 176
              |||||||||||||||||||||
Sbjct: 166586 atggtgatgtatacatctcca 166606



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>emb|CR407581.9| Zebrafish DNA sequence from clone DKEY-17A16 in linkage group 8,
             complete sequence
          Length = 154966

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 156   atggtgatgtatacatctcca 176
             |||||||||||||||||||||
Sbjct: 20666 atggtgatgtatacatctcca 20686



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>emb|CR790377.18| Zebrafish DNA sequence from clone CH211-260M3 in linkage group 3,
             complete sequence
          Length = 147590

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 156   atggtgatgtatacatctcca 176
             |||||||||||||||||||||
Sbjct: 21378 atggtgatgtatacatctcca 21358



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>emb|BX324005.11| Zebrafish DNA sequence from clone DKEY-115F6 in linkage group 13,
             complete sequence
          Length = 66154

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 156   atggtgatgtatacatctcca 176
             |||||||||||||||||||||
Sbjct: 44995 atggtgatgtatacatctcca 44975



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>emb|BX649536.8| Zebrafish DNA sequence from clone DKEY-21N8 in linkage group 3,
             complete sequence
          Length = 203180

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 156   atggtgatgtatacatctcca 176
             |||||||||||||||||||||
Sbjct: 12019 atggtgatgtatacatctcca 12039



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>emb|CR933841.5| Zebrafish DNA sequence from clone CH211-178N14 in linkage group 19,
             complete sequence
          Length = 44619

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 156   atggtgatgtatacatctcca 176
             |||||||||||||||||||||
Sbjct: 33834 atggtgatgtatacatctcca 33854



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>emb|AL844883.15| Zebrafish DNA sequence from clone DKEY-3J22 in linkage group 18,
             complete sequence
          Length = 189984

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 156   atggtgatgtatacatctcca 176
             |||||||||||||||||||||
Sbjct: 16570 atggtgatgtatacatctcca 16590



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>emb|BX072581.5| Zebrafish DNA sequence from clone DKEY-14K7 in linkage group 7, complete
              sequence
          Length = 239497

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 156    atggtgatgtatacatctcca 176
              |||||||||||||||||||||
Sbjct: 202591 atggtgatgtatacatctcca 202611



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>ref|XM_482631.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1284

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 302  gccgtcagctcctccacctc 321
            ||||||||||||||||||||
Sbjct: 1027 gccgtcagctcctccacctc 1008



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>emb|CR318593.15| Zebrafish DNA sequence from clone CH211-160O17 in linkage group 11,
             complete sequence
          Length = 166807

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 354   cacctgcatacctgctaaca 373
             ||||||||||||||||||||
Sbjct: 76634 cacctgcatacctgctaaca 76653



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>ref|XM_449846.1| Candida glabrata CBS138 hypothetical protein (CAGL0M11616g) partial
            mRNA
          Length = 14643

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 113  cagttttagaaggtttgaac 132
            ||||||||||||||||||||
Sbjct: 5474 cagttttagaaggtttgaac 5493



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>gb|BC046839.1| Xenopus laevis polo-like kinase (Drosophila), mRNA (cDNA clone
            MGC:52566 IMAGE:4930653), complete cds
          Length = 2360

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 465  caatgatggagacagcctgc 484
            ||||||||||||||||||||
Sbjct: 1480 caatgatggagacagcctgc 1499



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>emb|AL512654.9| Human DNA sequence from clone RP11-92P6 on chromosome 10 Contains the
             3' end of the HNRPF gene for heterogeneous nuclear
             ribonucleoprotein F, a novel gene and two CpG islands,
             complete sequence
          Length = 45276

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 476   acagcctgcccactctgccc 495
             ||||||||||||||||||||
Sbjct: 15362 acagcctgcccactctgccc 15381



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>emb|AL133331.27| Human DNA sequence from clone RP11-157E14 on chromosome 20 Contains the
             3' end of a novel gene, the 5' end of a novel gene, a
             novel gene and the 5' end of  the SPTLC2L gene for serine
             palmitoyltransferase long chain base subunit 2-like
             (aminotransferase 2), complete sequence
          Length = 85110

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 159   gtgatgtatacatctccatattttacaa 186
             ||||||||||||| |||||| |||||||
Sbjct: 70958 gtgatgtatacatttccataatttacaa 70931



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>emb|CR380959.1| Candida glabrata strain CBS138 chromosome M complete sequence
          Length = 1400893

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 113     cagttttagaaggtttgaac 132
               ||||||||||||||||||||
Sbjct: 1150710 cagttttagaaggtttgaac 1150691



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>gb|AE012436.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 344
            of 460 of the complete genome
          Length = 11689

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 339  ggcggttgccaatgtcacctgcat 362
            |||||||||||||| |||||||||
Sbjct: 2764 ggcggttgccaatgccacctgcat 2741



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>gb|DQ377418.1| Uncultured ectomycorrhiza (Thelephoraceae) isolate JLP2443 internal
           transcribed spacer 1, partial sequence; 5.8S ribosomal
           RNA gene, complete sequence; and internal transcribed
           spacer 2, partial sequence
          Length = 582

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 442 aaccacagcagcaagaggac 461
           ||||||||||||||||||||
Sbjct: 133 aaccacagcagcaagaggac 114



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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 339     ggcggttgccaatgtcacctgcat 362
               |||||||||||||| |||||||||
Sbjct: 1168327 ggcggttgccaatgccacctgcat 1168350



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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 302      gccgtcagctcctccacctc 321
                ||||||||||||||||||||
Sbjct: 21542737 gccgtcagctcctccacctc 21542756



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>gb|AF208204.1| Gilia cana internal transcribed spacer 1, partial sequence; 5.8S
          ribosomal RNA gene, complete sequence; and internal
          transcribed spacer 2, partial sequence
          Length = 626

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 60 agatacaacactcgtcccac 79
          ||||||||||||||||||||
Sbjct: 69 agatacaacactcgtcccac 50



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>dbj|AP004703.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0528B09
          Length = 156897

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 302    gccgtcagctcctccacctc 321
              ||||||||||||||||||||
Sbjct: 146732 gccgtcagctcctccacctc 146751



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>dbj|AP004764.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
            clone:P0708B04
          Length = 170523

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 302  gccgtcagctcctccacctc 321
            ||||||||||||||||||||
Sbjct: 2911 gccgtcagctcctccacctc 2930



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>dbj|AK073494.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044F17, full
            insert sequence
          Length = 1285

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 302  gccgtcagctcctccacctc 321
            ||||||||||||||||||||
Sbjct: 1028 gccgtcagctcctccacctc 1009



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>dbj|AK066840.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088M11, full
           insert sequence
          Length = 865

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 302 gccgtcagctcctccacctc 321
           ||||||||||||||||||||
Sbjct: 643 gccgtcagctcctccacctc 624



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>emb|BX004834.13| Zebrafish DNA sequence from clone CH211-42E22 in linkage group 18,
              complete sequence
          Length = 188895

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 150    atggtgatggtgatgtatac 169
              ||||||||||||||||||||
Sbjct: 129271 atggtgatggtgatgtatac 129252



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>gb|U58205.1|XLU58205 Xenopus laevis Plx1 mRNA, complete cds
          Length = 2381

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 465  caatgatggagacagcctgc 484
            ||||||||||||||||||||
Sbjct: 1481 caatgatggagacagcctgc 1500



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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 300    cggccgtcagctcctccacc 319
              ||||||||||||||||||||
Sbjct: 744832 cggccgtcagctcctccacc 744813



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>gb|AC171205.1| Mus musculus BAC clone RP23-441H20 from chromosome 16, complete
             sequence
          Length = 212822

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 303   ccgtcagctcctccacctct 322
             ||||||||||||||||||||
Sbjct: 66225 ccgtcagctcctccacctct 66206



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>emb|AL671909.8| Mouse DNA sequence from clone RP23-446F20 on chromosome 4, complete
             sequence
          Length = 85802

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 167   tacatctccatattttacaa 186
             ||||||||||||||||||||
Sbjct: 83800 tacatctccatattttacaa 83781


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,711,576
Number of Sequences: 3902068
Number of extensions: 3711576
Number of successful extensions: 79845
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79679
Number of HSP's gapped (non-prelim): 166
length of query: 504
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 482
effective length of database: 17,147,199,772
effective search space: 8264950290104
effective search space used: 8264950290104
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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