>STK39_RAT (O88506) STE20/SPS1-related proline-alanine-rich protein kinase (EC|
           2.7.11.1) (Ste-20-related kinase)
           (Serine/threonine-protein kinase 39) (Pancreatic
           serine/threonine-protein kinase) (PS/TK) (PSTK1)
          Length = 553

 Score = 31.2 bits (69), Expect = 0.62
 Identities = 19/59 (32%), Positives = 24/59 (40%)
 Frame = +2

Query: 188 PYVTQLTQIRTSTVQRIIHPSLATAKSYPI*TLATPPVPMPLLWWSPTPAP*ACSAGYP 364
           P   QL Q           P+ AT+   P    A P  P P    +P PAP A + G+P
Sbjct: 8   PVHVQLPQQAAPVTAAAAAPAAATSAPAPAPAPAAPAAPAPAPAAAPAPAPAAQAVGWP 66

>PCDAB_HUMAN (Q9Y5I1) Protocadherin alpha 11 precursor (PCDH-alpha11)|
          Length = 949

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +2

Query: 314 LWWSPTPAP*ACSAGYPPLL 373
           LWWS TP   AC+ G P L+
Sbjct: 720 LWWSATPTEGACAPGKPTLV 739

>BCL9_MOUSE (Q9D219) B-cell lymphoma 9 protein (Bcl-9)|
          Length = 1425

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +2

Query: 245  PSLATAKSYPI*TLATPPVPMPLLWWSPTPAP*ACSAGYPP 367
            P L +A + P+  L +P +P P   W+ +P P   S G PP
Sbjct: 908  PVLGSAAASPV-HLKSPSLPAPSPGWTSSPKPPLQSPGIPP 947

>BCL9_HUMAN (O00512) B-cell lymphoma 9 protein (Bcl-9) (Legless homolog)|
          Length = 1426

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +2

Query: 245  PSLATAKSYPI*TLATPPVPMPLLWWSPTPAP*ACSAGYPP 367
            P L +A + P+  L +P +P P   W+ +P P   S G PP
Sbjct: 909  PVLGSAAASPV-HLKSPSLPAPSPGWTSSPKPPLQSPGIPP 948

>AMOT_HUMAN (Q4VCS5) Angiomotin|
          Length = 1084

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 17/42 (40%), Positives = 20/42 (47%)
 Frame = +2

Query: 239  IHPSLATAKSYPI*TLATPPVPMPLLWWSPTPAP*ACSAGYP 364
            + PS A A +  +   A  PVP P L   P PAP A  A  P
Sbjct: 959  VAPSAAAAAAVQVAPAAPAPVPAPAL--VPVPAPAAAQASAP 998

>FANCJ_CHICK (Q3YK19) Fanconi anemia group J protein homolog (EC 3.6.1.-)|
           (ATP-dependent RNA helicase BRIP1) (Protein FACJ)
          Length = 1252

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +1

Query: 25  RTPVVQHACTCVCNTRSP*KKKGTMSSTCVPCSHTYPT 138
           R P     C CVC++RS   +    +S    CS+ Y T
Sbjct: 82  REPAASLPCRCVCHSRSESSEATAGASHGAACSNNYET 119

>CC022_MOUSE (Q8C5S3) Protein C3orf22 homolog|
          Length = 137

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +2

Query: 239 IHPSLATAKSYPI*TLATPPVPMPLLWWSPTPAP*ACS 352
           +  +L   +S PI  L  P V  P  ++SP P P  C+
Sbjct: 58  LQKNLVPTRSIPIPGLGAPQVAWPFSFYSPPPHPPLCN 95

>UHPT_CHLPN (Q9Z7N9) Probable hexose phosphate transport protein|
          Length = 455

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 7/48 (14%)
 Frame = -1

Query: 142 WQWGMCVSMARMYYSWFPSFFRGTWYYIRTYMH-------VVLPGFLL 20
           W W  C   AR+   W+    RGTW+ + +  H        +L GF++
Sbjct: 137 WGWPPC---ARLLTHWYAKSERGTWWSVWSTSHNIGGALIPILTGFII 181

>LDB3_HUMAN (O75112) LIM domain-binding protein 3 (Z-band alternatively spliced|
           PDZ-motif protein) (Protein cypher)
          Length = 727

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 5/82 (6%)
 Frame = +2

Query: 161 HTTYSS-----AL*PYVTQLTQIRTSTVQRIIHPSLATAKSYPI*TLATPPVPMPLLWWS 325
           HT+YS      A  P V     IR S  Q +  P+   + S       TP  P P   ++
Sbjct: 381 HTSYSEGPAAPAPKPRVVTTASIRPSVYQPV--PASTYSPSPGANYSPTPYTPSPAPAYT 438

Query: 326 PTPAP*ACSAGYPPLLLPNWFP 391
           P+PAP      Y P  +P + P
Sbjct: 439 PSPAP-----AYTPSPVPTYTP 455

>RTBDN_MOUSE (Q8QZY4) Retbindin precursor|
          Length = 247

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
 Frame = +2

Query: 209 QIRTSTVQRIIHPSLATAKSYP---I*TLATPPVPMP 310
           ++RT  +Q   HP  +   SYP   +    TPPVP+P
Sbjct: 47  KVRTGQLQPAGHPQSSVLPSYPRIQVPGSQTPPVPVP 83

>LIMK2_HUMAN (P53671) LIM domain kinase 2 (EC 2.7.11.1) (LIMK-2)|
          Length = 638

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 15/53 (28%), Positives = 23/53 (43%)
 Frame = -3

Query: 182 EQKSRLYASSTHGMAVGYVCEHGTHVLLMVPFFF*GDLVLHTHVHACCTTGVL 24
           E+  +LY    +    G  C HG  +L+  PF   G+   H    AC +  V+
Sbjct: 53  EKDGKLYCPKDYWGKFGEFC-HGCSLLMTGPFMVAGEFKYHPECFACMSCKVI 104

>UHPT_CHLTR (O84548) Probable hexose phosphate transport protein|
          Length = 456

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = -1

Query: 142 WQWGMCVSMARMYYSWFPSFFRGTWYYIRTYMH 44
           W W  C   AR+   W+    RGTW+ + +  H
Sbjct: 137 WGWPPC---ARLLTHWYSKSERGTWWSVWSTSH 166

>UHPT_CHLMU (Q9PJJ8) Probable hexose phosphate transport protein|
          Length = 456

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = -1

Query: 142 WQWGMCVSMARMYYSWFPSFFRGTWYYIRTYMH 44
           W W  C   AR+   W+    RGTW+ + +  H
Sbjct: 137 WGWPPC---ARLLTHWYSKSERGTWWSVWSTSH 166

>GBF2_ARATH (P42775) G-box-binding factor 2 (AtbZIP54)|
          Length = 360

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +2

Query: 284 LATPPVPMPLLWWSPTPAP*ACSAGYPPLLLP 379
           LA    P P +W SP+P      A YPP   P
Sbjct: 55  LAPGHAPPPYMWASPSPMMAPYGAPYPPFCPP 86

>ACA12_ARATH (Q9LY77) Putative calcium-transporting ATPase 12, plasma|
            membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 12)
          Length = 1033

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -1

Query: 142  WQWGMCVSMARMYYSWFPSFF 80
            WQWG C+++A +  SW   FF
Sbjct: 982  WQWGTCIALASL--SWPIGFF 1000

>XYND_CELFI (P54865) Endo-1,4-beta-xylanase D precursor (EC 3.2.1.8) (Xylanase|
           D) (XYLD)
          Length = 644

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +2

Query: 296 PVPMPLLWWSPTPAP*ACSAGY 361
           P P P    +PTP P +CSAGY
Sbjct: 340 PTPTP----TPTPTPQSCSAGY 357


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,125,918
Number of Sequences: 219361
Number of extensions: 1012034
Number of successful extensions: 2615
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2601
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 1370455656
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)