>gb|AF218627.1|AF218627 Hordeum vulgare plasma membrane associated protein (pm19) mRNA,
           complete cds
          Length = 1000

 Score =  684 bits (345), Expect = 0.0
 Identities = 385/398 (96%), Gaps = 2/398 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ccattcatttataaaacactagcaagaaccccggtagtacaacatgcatgtacgtgcgta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 970 ccattcatttataaaacactagcaagaaccccggtagtacaacatgcatgtacgtgcgta 911

                                                                       
Query: 61  tgtaataccaggtccccctnnnnnnn-gaagggaaccatgagtagtacatgcgtgccatg 119
           |||||||||||||||||||        |||||||||||||||||||||||||||||||||
Sbjct: 910 tgtaataccaggtccccctaaaaaaaagaagggaaccatgagtagtacatgcgtgccatg 851

                                                                       
Query: 120 ctcacacacataccccactgccatgccatgggtcgacgatgcatacaacctactcttctg 179
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 850 ctcacacacataccccactgccatgccatggatcgacgatgcatacaacctactcttctg 791

                                                                       
Query: 180 ctctctaaccgtacgtgacacaactaacacaaatacgtactagtacagtacaacgtatta 239
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 790 ctctctaaccgtacgtgacacaactaacacaaatacgtactagtacagtacaacttatta 731

                                                                       
Query: 240 tccacccgtcgcttgccacggccaagtcttatcctatttagacccttgcgacgccgccgg 299
           |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 730 tccacccgtcgcttgccacggccaagtc-tatcctatttagacccttgccacgccgccgg 672

                                                                       
Query: 300 tgcccatgcccttgttgtggtggtcaccgacgccggcgccgtaagcgtgctccgccggat 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 tgcccatgcccttgttgtggtggtcaccgacgccggcgccgtaagcgtgctccgccggat 612

                                                 
Query: 360 acccaccattgttattaccaaactggttcccgaagagc 397
           |||||||||||||||||||||||||||| |||||||||
Sbjct: 611 acccaccattgttattaccaaactggtttccgaagagc 574

>gb|U80037.1|TAU80037 Triticum aestivum ABA induced plasma membrane protein PM-19
           (WTABAPM) mRNA, complete cds
          Length = 1094

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 281 acccttgcgacgccgccggtgcccatgcccttgttgtg 318
           ||||| ||||||||||||||||||||||||||||||||
Sbjct: 684 accctcgcgacgccgccggtgcccatgcccttgttgtg 647



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 377 ccaaactggttcccgaagag 396
           ||||||||||||||||||||
Sbjct: 585 ccaaactggttcccgaagag 566

>gb|AC090155.10| Homo sapiens chromosome 8, clone RP11-738G5, complete sequence
          Length = 192053

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 8     tttataaaacactagcaagaa 28
             |||||||||||||||||||||
Sbjct: 99015 tttataaaacactagcaagaa 99035

>gb|AC125093.4| Mus musculus BAC clone RP24-176F8 from chromosome 19, complete sequence
          Length = 158027

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 119    gctcacacacataccccact 138
              ||||||||||||||||||||
Sbjct: 113098 gctcacacacataccccact 113117

>gb|AC124169.3| Mus musculus BAC clone RP23-151G15 from 19, complete sequence
          Length = 201188

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 119  gctcacacacataccccact 138
            ||||||||||||||||||||
Sbjct: 5740 gctcacacacataccccact 5759

>ref|XM_970550.1| PREDICTED: Tribolium castaneum similar to CG32796-PB, isoform B
            (LOC664554), mRNA
          Length = 2484

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 301  gcccatgcccttgttgtggtggtc 324
            |||| |||||||||||||||||||
Sbjct: 1479 gcccttgcccttgttgtggtggtc 1456

>gb|AC158313.7| Mus musculus chromosome 8, clone RP23-246H16, complete sequence
          Length = 168864

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 119   gctcacacacataccccact 138
             ||||||||||||||||||||
Sbjct: 64380 gctcacacacataccccact 64399

>gb|AE004673.1| Pseudomonas aeruginosa PAO1, section 234 of 529 of the complete genome
          Length = 24397

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 318   ggtggtcaccgacgccggcgccgt 341
             |||||||||||||||||| |||||
Sbjct: 18564 ggtggtcaccgacgccggtgccgt 18541

>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 315     tgtggtggtcaccgacgccggcgc 338
               |||||||||||||||| |||||||
Sbjct: 1929221 tgtggtggtcaccgactccggcgc 1929244

>emb|AJ132503.1|MXA132503 Myxococcus xanthus taB, taC, taD, taE and taF genes
          Length = 4513

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 287  gcgacgccgccggtgcccat 306
            ||||||||||||||||||||
Sbjct: 3700 gcgacgccgccggtgcccat 3681

>emb|AJ937741.1| Streptomyces ambofaciens ATCC 23877 right terminal inverted repeat
          Length = 243019

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 320    tggtcaccgacgccggcgcc 339
              ||||||||||||||||||||
Sbjct: 154337 tggtcaccgacgccggcgcc 154318

>emb|AJ937740.1| Streptomyces ambofaciens ATCC 23877 left terminal inverted repeat
          Length = 273746

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 320    tggtcaccgacgccggcgcc 339
              ||||||||||||||||||||
Sbjct: 154337 tggtcaccgacgccggcgcc 154318


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,906,458
Number of Sequences: 3902068
Number of extensions: 2906458
Number of successful extensions: 53059
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53010
Number of HSP's gapped (non-prelim): 48
length of query: 397
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 375
effective length of database: 17,147,199,772
effective search space: 6430199914500
effective search space used: 6430199914500
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)