ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart35b07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|AJ628169.1| Hordeum vulgare bci3 gene for putative acid phos... 204 2e-49
2emb|AJ250282.2|HVU250282 Hordeum vulgare partial mRNA for putati... 204 2e-49
3gb|AY106317.1| Zea mays PCO101473 mRNA sequence 184 2e-43
4gb|AC145271.4| Oryza sativa (japonica cultivar-group) chromosome... 157 4e-35
5dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 157 4e-35
6dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
7dbj|AP005256.3| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
8dbj|AP005642.3| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
9dbj|AK059825.1| Oryza sativa (japonica cultivar-group) cDNA clon... 153 7e-34
10ref|XM_477966.1| Oryza sativa (japonica cultivar-group), mRNA 151 3e-33
11dbj|AK061404.1| Oryza sativa (japonica cultivar-group) cDNA clon... 121 2e-24
12dbj|AK119190.1| Oryza sativa (japonica cultivar-group) cDNA clon... 92 2e-15
13dbj|AK106112.1| Oryza sativa (japonica cultivar-group) cDNA clon... 92 2e-15
14dbj|AK104355.1| Oryza sativa (japonica cultivar-group) cDNA clon... 92 2e-15
15dbj|AK104267.1| Oryza sativa (japonica cultivar-group) cDNA clon... 92 2e-15
16dbj|AK104252.1| Oryza sativa (japonica cultivar-group) cDNA clon... 92 2e-15
17dbj|AK104180.1| Oryza sativa (japonica cultivar-group) cDNA clon... 92 2e-15
18dbj|AK061507.1| Oryza sativa (japonica cultivar-group) cDNA clon... 92 2e-15
19gb|AC152973.1| Oryza sativa (japonica cultivar-group) chromosome... 92 2e-15
20gb|AC152971.3| Oryza sativa (japonica cultivar-group) chromosome... 92 2e-15
21gb|AC148611.1| Oryza sativa (japonica cultivar-group) chromosome... 74 5e-10
22gb|AC093489.2| Oryza sativa (japonica cultivar-group) chromosome... 74 5e-10
23dbj|AK109335.2| Oryza sativa (japonica cultivar-group) cDNA clon... 68 3e-08
24dbj|AK104519.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 3e-08
25dbj|AK104460.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 3e-08
26dbj|AK104246.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 3e-08
27dbj|AK060968.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 3e-08
28dbj|AK104624.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
29dbj|AK104203.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
30dbj|AK067327.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
31dbj|AK060874.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
32ref|NM_189664.1| Oryza sativa (japonica cultivar-group), predic... 56 1e-04
33dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
34dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
35dbj|AK109404.2| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
36dbj|AK104471.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
37dbj|AK104183.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
38dbj|AK100363.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
39dbj|AK061466.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
40dbj|AK060964.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
41dbj|AK061489.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 5e-04
42emb|AL356107.21| Human DNA sequence from clone RP11-484D5 on chr... 44 0.44
43gb|AC009400.4|ATAC009400 Arabidopsis thaliana chromosome III BAC... 42 1.7
44emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete ... 42 1.7
45gb|AC134585.6| Mus musculus BAC clone RP23-302F9 from 8, complet... 42 1.7
46gb|AC167976.4| Mus musculus BAC clone RP23-167L5 from chromosome... 40 6.8
47ref|NM_193052.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.8
48ref|NM_193043.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.8
49gb|AC118201.8| Mus musculus chromosome 7, clone RP23-339M11, com... 40 6.8
50gb|AC132483.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.8
51ref|XM_425961.1| PREDICTED: Gallus gallus similar to multiple my... 40 6.8
52gb|DQ481666.1| Takifugu rubripes HoxBb gene cluster, complete se... 40 6.8
53gb|AC134932.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.8
54gb|AC147153.2| Mus musculus chromosome y clone RP24-373C15, comp... 40 6.8
55gb|AC159816.2| Mus musculus BAC clone RP23-321A19 from chromosom... 40 6.8
56gb|AC158213.4| Mus musculus chromosome 7, clone RP24-253H20, com... 40 6.8
57gb|AC090525.8| Homo sapiens 12 BAC RP11-73B8 (Roswell Park Cance... 40 6.8
58emb|AL645544.16| Mouse DNA sequence from clone RP23-327M13 on ch... 40 6.8
59emb|AL645946.6| Mouse DNA sequence from clone DN-276O13 on chrom... 40 6.8
60gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 6.8
61dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, compl... 40 6.8
62dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 40 6.8
63gb|AC021860.6| Homo sapiens BAC clone RP11-617D20 from 4, comple... 40 6.8
64dbj|AK157470.1| Mus musculus activated spleen cDNA, RIKEN full-l... 40 6.8
65emb|BX950605.2| Gallus gallus finished cDNA, clone ChEST529k5 40 6.8
66dbj|AK050953.1| Mus musculus 9 days embryo whole body cDNA, RIKE... 40 6.8
67dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
68emb|BX934717.1| Gallus gallus finished cDNA, clone ChEST114j14 40 6.8
69ref|XM_231590.3| PREDICTED: Rattus norvegicus plexin A4 (predict... 40 6.8
70gb|AC010656.7|AC010656 Homo sapiens clone RP11-275E24, complete ... 40 6.8
71dbj|AP004306.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
72dbj|AP004260.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
73emb|CR545466.9| Zebrafish DNA sequence from clone DKEYP-115A10 i... 40 6.8
74dbj|AP004009.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
75emb|AL163153.4|CNS01RIE Human chromosome 14 DNA sequence BAC R-1... 40 6.8
76emb|AJ871288.1| Gadus morhua immunoglobulin heavy chain locus, g... 40 6.8
77gb|AC174770.1| Gasterosteus aculeatus clone VMRC28-84C03, comple... 40 6.8
78gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.8
79emb|AL831807.7|CNS08CAK Oryza sativa chromosome 12, . BAC OSJNBa... 40 6.8
80gb|AC109165.11| Mus musculus chromosome 5, clone RP23-30B3, comp... 40 6.8
81emb|AL512359.2|CNS07EF8 Human chromosome 14 DNA sequence BAC R-2... 40 6.8

>emb|AJ628169.1| Hordeum vulgare bci3 gene for putative acid phosphatase
          Length = 2748

 Score =  204 bits (103), Expect = 2e-49
 Identities = 208/243 (85%)
 Strand = Plus / Minus

                                                                        
Query: 255  cctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgc 314
            ||||| ||||||||||||||||||| ||| |  |||||||||| || ||||| |||||||
Sbjct: 2618 cctaggcgatgtagtacatggggtcaggccggctgaaggtgcgagcgccctcgggcgcgc 2559

                                                                        
Query: 315  cgaggatgtcgccccactggtcgccgatgttaccgacgatgacatacccggcgtcctgca 374
            |||||||||||| |||||||||||||||||| ||||||||||| |||||||| |||| ||
Sbjct: 2558 cgaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcatcctcca 2499

                                                                        
Query: 375  gcttctgcctctcgccggacttgtaggtcaccgcagagcccttgaacccgggttgcttca 434
            |||||| ||||||| ||||||||||||  |  || ||||||||||||||  ||||||| |
Sbjct: 2498 gcttcttcctctcggcggacttgtaggatatggcggagcccttgaacccatgttgcttga 2439

                                                                        
Query: 435  gcaagaggttcatccacccagagatcccctggcggcggaggttggtgacggtgatggccc 494
            ||   ||| |||||||||| ||||  ||||||| |||||||||   |||||||| |||||
Sbjct: 2438 gcgtcaggctcatccacccggagaagccctggctgcggaggttcccgacggtgacggccc 2379

               
Query: 495  tct 497
            |||
Sbjct: 2378 tct 2376



to top

>emb|AJ250282.2|HVU250282 Hordeum vulgare partial mRNA for putative acid phosphatase (bci-3
            gene)
          Length = 1152

 Score =  204 bits (103), Expect = 2e-49
 Identities = 208/243 (85%)
 Strand = Plus / Minus

                                                                        
Query: 255  cctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgc 314
            ||||| ||||||||||||||||||| ||| |  |||||||||| || ||||| |||||||
Sbjct: 1022 cctaggcgatgtagtacatggggtcaggccggctgaaggtgcgagcgccctcgggcgcgc 963

                                                                        
Query: 315  cgaggatgtcgccccactggtcgccgatgttaccgacgatgacatacccggcgtcctgca 374
            |||||||||||| |||||||||||||||||| ||||||||||| |||||||| |||| ||
Sbjct: 962  cgaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcatcctcca 903

                                                                        
Query: 375  gcttctgcctctcgccggacttgtaggtcaccgcagagcccttgaacccgggttgcttca 434
            |||||| ||||||| ||||||||||||  |  || ||||||||||||||  ||||||| |
Sbjct: 902  gcttcttcctctcggcggacttgtaggatatggcggagcccttgaacccatgttgcttga 843

                                                                        
Query: 435  gcaagaggttcatccacccagagatcccctggcggcggaggttggtgacggtgatggccc 494
            ||   ||| |||||||||| ||||  ||||||| |||||||||   |||||||| |||||
Sbjct: 842  gcgtcaggctcatccacccggagaagccctggctgcggaggttcccgacggtgacggccc 783

               
Query: 495  tct 497
            |||
Sbjct: 782  tct 780



to top

>gb|AY106317.1| Zea mays PCO101473 mRNA sequence
          Length = 827

 Score =  184 bits (93), Expect = 2e-43
 Identities = 132/145 (91%)
 Strand = Plus / Minus

                                                                       
Query: 257 tagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccg 316
           ||||| |||||||| | |||||| ||||||||||||||||| || ||||| |||||||||
Sbjct: 541 tagccaatgtagtagagggggtcaggcagcttgaaggtgcgcgcgccctccggcgcgccg 482

                                                                       
Query: 317 aggatgtcgccccactggtcgccgatgttaccgacgatgacatacccggcgtcctgcagc 376
           |||||||||| |||||||||||||||||| ||||||||||| |||||||||||||| |||
Sbjct: 481 aggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcgtcctggagc 422

                                    
Query: 377 ttctgcctctcgccggacttgtagg 401
           ||||| | |||||||||||||||||
Sbjct: 421 ttctggcgctcgccggacttgtagg 397



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 45/45 (100%)
 Strand = Plus / Minus

                                                        
Query: 460 cccctggcggcggaggttggtgacggtgatggccctctggtcctc 504
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 cccctggcggcggaggttggtgacggtgatggccctctggtcctc 294



to top

>gb|AC145271.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1140B01,
             complete sequence
          Length = 135184

 Score =  157 bits (79), Expect = 4e-35
 Identities = 127/143 (88%)
 Strand = Plus / Plus

                                                                         
Query: 255   cctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgc 314
             |||||||||||||||||| |||||| |||| ||||||||||||||| ||||| ||||| |
Sbjct: 89814 cctagccgatgtagtacagggggtcaggcaacttgaaggtgcgggcgccctccggcgcac 89873

                                                                         
Query: 315   cgaggatgtcgccccactggtcgccgatgttaccgacgatgacatacccggcgtcctgca 374
             |||||||||||| ||||||||| ||||||||||||||||||    | ||||| |||| ||
Sbjct: 89874 cgaggatgtcgctccactggtcaccgatgttaccgacgatggtgaaaccggcatcctcca 89933

                                    
Query: 375   gcttctgcctctcgccggacttg 397
             ||||||||| |||||||||||||
Sbjct: 89934 gcttctgccgctcgccggacttg 89956



 Score =  153 bits (77), Expect = 7e-34
 Identities = 122/137 (89%)
 Strand = Plus / Plus

                                                                         
Query: 263   atgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatg 322
             |||||||| | |||||| |||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 80220 atgtagtataaggggtcaggcagcttgaaggtgcgggcgccctccggcgcgccgaggatg 80279

                                                                         
Query: 323   tcgccccactggtcgccgatgttaccgacgatgacatacccggcgtcctgcagcttctgc 382
             || | ||||||||| |||||||| ||||||||||   | || ||||||||||||||||||
Sbjct: 80280 tcactccactggtcaccgatgttcccgacgatgatgaagccagcgtcctgcagcttctgc 80339

                              
Query: 383   ctctcgccggacttgta 399
             | |||||||||||||||
Sbjct: 80340 cgctcgccggacttgta 80356



 Score =  149 bits (75), Expect = 1e-32
 Identities = 126/143 (88%)
 Strand = Plus / Plus

                                                                         
Query: 255   cctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgc 314
             |||||||||||||||||| |||||| |||| ||||||||||||||| ||||| ||||| |
Sbjct: 90313 cctagccgatgtagtacagggggtcaggcaacttgaaggtgcgggcgccctccggcgcac 90372

                                                                         
Query: 315   cgaggatgtcgccccactggtcgccgatgttaccgacgatgacatacccggcgtcctgca 374
             |||||||||||| ||||||||| |||||||||||||| |||    | ||||| |||| ||
Sbjct: 90373 cgaggatgtcgctccactggtcaccgatgttaccgacaatggtgaaaccggcatcctcca 90432

                                    
Query: 375   gcttctgcctctcgccggacttg 397
             ||||||||| |||||||||||||
Sbjct: 90433 gcttctgccgctcgccggacttg 90455



 Score =  121 bits (61), Expect = 2e-24
 Identities = 124/145 (85%)
 Strand = Plus / Plus

                                                                          
Query: 255    cctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgc 314
              ||||||||||||||||||||||||| |||||||||||||||||||| ||||| || |  |
Sbjct: 104198 cctagccgatgtagtacatggggtccggcagcttgaaggtgcgggcgccctccggtgtac 104257

                                                                          
Query: 315    cgaggatgtcgccccactggtcgccgatgttaccgacgatgacatacccggcgtcctgca 374
              |||||||||| | ||| ||||| || |||||||||| ||||    | ||||| |||| ||
Sbjct: 104258 cgaggatgtcactccattggtcaccaatgttaccgaggatggtgaaaccggcatcctcca 104317

                                       
Query: 375    gcttctgcctctcgccggacttgta 399
              |||| |||| |||||||||||||||
Sbjct: 104318 gcttttgccgctcgccggacttgta 104342



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                  
Query: 314  ccgaggatgtcgccccactggtcgccgatgttaccgacgatgacatacccggcg 367
            |||||||| |||| ||| ||||| ||||||||||||||||||||||| ||||||
Sbjct: 5307 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 5360



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                          
Query: 461    ccctggcggcggaggttggtgacggtgatggccctctggtcctc 504
              ||||| ||||||||||| ||||||||||||  ||| ||||||||
Sbjct: 104419 ccctgccggcggaggtttgtgacggtgatgttcctttggtcctc 104462



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                         
Query: 429   gcttcagcaagaggttcatccacccagagatcccctggcggcggaggttggtgacggtga 488
             |||| ||||| || ||||||||||| |||   ||||| ||||| ||||| ||||||||||
Sbjct: 90502 gcttgagcaacagcttcatccacccggagtatccctgccggcgaaggtttgtgacggtga 90561

               
Query: 489   tg 490
             ||
Sbjct: 90562 tg 90563



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                   
Query: 448   ccacccagagatcccctggcggcggaggttggtgacggtgatggccctctggtc 501
             |||||| ||||  ||||| ||| ||||||| ||||||||||||| ||| |||||
Sbjct: 80420 ccacccggagaatccctgtcggtggaggttcgtgacggtgatggtcctttggtc 80473



to top

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  157 bits (79), Expect = 4e-35
 Identities = 127/143 (88%)
 Strand = Plus / Plus

                                                                           
Query: 255     cctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgc 314
               |||||||||||||||||| |||||| |||| ||||||||||||||| ||||| ||||| |
Sbjct: 5556605 cctagccgatgtagtacagggggtcaggcaacttgaaggtgcgggcgccctccggcgcac 5556664

                                                                           
Query: 315     cgaggatgtcgccccactggtcgccgatgttaccgacgatgacatacccggcgtcctgca 374
               |||||||||||| ||||||||| ||||||||||||||||||    | ||||| |||| ||
Sbjct: 5556665 cgaggatgtcgctccactggtcaccgatgttaccgacgatggtgaaaccggcatcctcca 5556724

                                      
Query: 375     gcttctgcctctcgccggacttg 397
               ||||||||| |||||||||||||
Sbjct: 5556725 gcttctgccgctcgccggacttg 5556747



 Score =  153 bits (77), Expect = 7e-34
 Identities = 122/137 (89%)
 Strand = Plus / Plus

                                                                           
Query: 263     atgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatg 322
               |||||||| | |||||| |||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 5547011 atgtagtataaggggtcaggcagcttgaaggtgcgggcgccctccggcgcgccgaggatg 5547070

                                                                           
Query: 323     tcgccccactggtcgccgatgttaccgacgatgacatacccggcgtcctgcagcttctgc 382
               || | ||||||||| |||||||| ||||||||||   | || ||||||||||||||||||
Sbjct: 5547071 tcactccactggtcaccgatgttcccgacgatgatgaagccagcgtcctgcagcttctgc 5547130

                                
Query: 383     ctctcgccggacttgta 399
               | |||||||||||||||
Sbjct: 5547131 cgctcgccggacttgta 5547147



 Score =  149 bits (75), Expect = 1e-32
 Identities = 126/143 (88%)
 Strand = Plus / Plus

                                                                           
Query: 255     cctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgc 314
               |||||||||||||||||| |||||| |||| ||||||||||||||| ||||| ||||| |
Sbjct: 5557104 cctagccgatgtagtacagggggtcaggcaacttgaaggtgcgggcgccctccggcgcac 5557163

                                                                           
Query: 315     cgaggatgtcgccccactggtcgccgatgttaccgacgatgacatacccggcgtcctgca 374
               |||||||||||| ||||||||| |||||||||||||| |||    | ||||| |||| ||
Sbjct: 5557164 cgaggatgtcgctccactggtcaccgatgttaccgacaatggtgaaaccggcatcctcca 5557223

                                      
Query: 375     gcttctgcctctcgccggacttg 397
               ||||||||| |||||||||||||
Sbjct: 5557224 gcttctgccgctcgccggacttg 5557246



 Score =  121 bits (61), Expect = 2e-24
 Identities = 124/145 (85%)
 Strand = Plus / Plus

                                                                           
Query: 255     cctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgc 314
               ||||||||||||||||||||||||| |||||||||||||||||||| ||||| || |  |
Sbjct: 5570989 cctagccgatgtagtacatggggtccggcagcttgaaggtgcgggcgccctccggtgtac 5571048

                                                                           
Query: 315     cgaggatgtcgccccactggtcgccgatgttaccgacgatgacatacccggcgtcctgca 374
               |||||||||| | ||| ||||| || |||||||||| ||||    | ||||| |||| ||
Sbjct: 5571049 cgaggatgtcactccattggtcaccaatgttaccgaggatggtgaaaccggcatcctcca 5571108

                                        
Query: 375     gcttctgcctctcgccggacttgta 399
               |||| |||| |||||||||||||||
Sbjct: 5571109 gcttttgccgctcgccggacttgta 5571133



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                           
Query: 284     agcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgccccactggtcgccgatg 343
               ||||||||||||||||| ||| | | || |||||||| ||||| ||||||||| ||||||
Sbjct: 5399395 agcttgaaggtgcgggctcccgccgccgggccgaggaggtcgctccactggtcaccgatg 5399454

                                
Query: 344     ttaccgacgatgacata 360
               |||||||| ||| ||||
Sbjct: 5399455 ttaccgacaatggcata 5399471



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                     
Query: 314     ccgaggatgtcgccccactggtcgccgatgttaccgacgatgacatacccggcg 367
               |||||||| |||| ||| ||||| ||||||||||||||||||||||| ||||||
Sbjct: 5472098 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 5472151



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 76/91 (83%)
 Strand = Plus / Plus

                                                                           
Query: 266     tagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcg 325
               ||||||||||||| ||| | ||| |||||||||  ||| || |||| || | ||||||||
Sbjct: 5416590 tagtacatggggttggggaacttaaaggtgcggcaaccatccggcgagcggcggatgtcg 5416649

                                              
Query: 326     ccccactggtcgccgatgttaccgacgatga 356
                 |||||||||||| ||||| ||||||||||
Sbjct: 5416650 ttccactggtcgccaatgttgccgacgatga 5416680



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                                  
Query: 316     gaggatgtcgccccactggtcgccgatgttaccgacgatgacatacccggc 366
               ||||||||||| ||||||||| |||||||| ||||  |||||||| |||||
Sbjct: 5452349 gaggatgtcgctccactggtcaccgatgttgccgataatgacatagccggc 5452399



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                           
Query: 461     ccctggcggcggaggttggtgacggtgatggccctctggtcctc 504
               ||||| ||||||||||| ||||||||||||  ||| ||||||||
Sbjct: 5571210 ccctgccggcggaggtttgtgacggtgatgttcctttggtcctc 5571253



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                           
Query: 429     gcttcagcaagaggttcatccacccagagatcccctggcggcggaggttggtgacggtga 488
               |||| ||||| || ||||||||||| |||   ||||| ||||| ||||| ||||||||||
Sbjct: 5557293 gcttgagcaacagcttcatccacccggagtatccctgccggcgaaggtttgtgacggtga 5557352

                 
Query: 489     tg 490
               ||
Sbjct: 5557353 tg 5557354



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                     
Query: 448     ccacccagagatcccctggcggcggaggttggtgacggtgatggccctctggtc 501
               |||||| ||||  ||||| ||| ||||||| ||||||||||||| ||| |||||
Sbjct: 5547211 ccacccggagaatccctgtcggtggaggttcgtgacggtgatggtcctttggtc 5547264



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 34       caaaaagaaaaacagcataa 53
                ||||||||||||||||||||
Sbjct: 19093896 caaaaagaaaaacagcataa 19093877



to top

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  155 bits (78), Expect = 2e-34
 Identities = 132/150 (88%)
 Strand = Plus / Minus

                                                                            
Query: 250      ggcggcctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctgg 309
                |||| ||||||||||||||||||||||||| ||||||||||||||||| || ||||| ||
Sbjct: 16055858 ggcgacctagccgatgtagtacatggggtcaggcagcttgaaggtgcgagcgccctccgg 16055799

                                                                            
Query: 310      cgcgccgaggatgtcgccccactggtcgccgatgttaccgacgatgacatacccggcgtc 369
                 || || | |||||| | ||||||||| |||||||||||||||||||   | ||||||||
Sbjct: 16055798 tgcacccaagatgtcactccactggtctccgatgttaccgacgatgatgaagccggcgtc 16055739

                                              
Query: 370      ctgcagcttctgcctctcgccggacttgta 399
                |||||||||||| | |||||||||||||||
Sbjct: 16055738 ctgcagcttctgacgctcgccggacttgta 16055709



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                            
Query: 461      ccctggcggcggaggttggtgacggtgatggccctctggtcctc 504
                ||||| ||||||||||| | ||||||||||||||||||||||||
Sbjct: 16055632 ccctgccggcggaggttcgcgacggtgatggccctctggtcctc 16055589



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 377      ttctgcctctcgccggactt 396
                ||||||||||||||||||||
Sbjct: 25973349 ttctgcctctcgccggactt 25973330



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 377      ttctgcctctcgccggactt 396
                ||||||||||||||||||||
Sbjct: 25938072 ttctgcctctcgccggactt 25938091



to top

>dbj|AP005256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0038F09
          Length = 166568

 Score =  155 bits (78), Expect = 2e-34
 Identities = 132/150 (88%)
 Strand = Plus / Minus

                                                                         
Query: 250   ggcggcctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctgg 309
             |||| ||||||||||||||||||||||||| ||||||||||||||||| || ||||| ||
Sbjct: 26191 ggcgacctagccgatgtagtacatggggtcaggcagcttgaaggtgcgagcgccctccgg 26132

                                                                         
Query: 310   cgcgccgaggatgtcgccccactggtcgccgatgttaccgacgatgacatacccggcgtc 369
              || || | |||||| | ||||||||| |||||||||||||||||||   | ||||||||
Sbjct: 26131 tgcacccaagatgtcactccactggtctccgatgttaccgacgatgatgaagccggcgtc 26072

                                           
Query: 370   ctgcagcttctgcctctcgccggacttgta 399
             |||||||||||| | |||||||||||||||
Sbjct: 26071 ctgcagcttctgacgctcgccggacttgta 26042



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                         
Query: 461   ccctggcggcggaggttggtgacggtgatggccctctggtcctc 504
             ||||| ||||||||||| | ||||||||||||||||||||||||
Sbjct: 25965 ccctgccggcggaggttcgcgacggtgatggccctctggtcctc 25922



to top

>dbj|AP005642.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0040K22
          Length = 155832

 Score =  155 bits (78), Expect = 2e-34
 Identities = 132/150 (88%)
 Strand = Plus / Minus

                                                                          
Query: 250    ggcggcctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctgg 309
              |||| ||||||||||||||||||||||||| ||||||||||||||||| || ||||| ||
Sbjct: 137260 ggcgacctagccgatgtagtacatggggtcaggcagcttgaaggtgcgagcgccctccgg 137201

                                                                          
Query: 310    cgcgccgaggatgtcgccccactggtcgccgatgttaccgacgatgacatacccggcgtc 369
               || || | |||||| | ||||||||| |||||||||||||||||||   | ||||||||
Sbjct: 137200 tgcacccaagatgtcactccactggtctccgatgttaccgacgatgatgaagccggcgtc 137141

                                            
Query: 370    ctgcagcttctgcctctcgccggacttgta 399
              |||||||||||| | |||||||||||||||
Sbjct: 137140 ctgcagcttctgacgctcgccggacttgta 137111



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                          
Query: 461    ccctggcggcggaggttggtgacggtgatggccctctggtcctc 504
              ||||| ||||||||||| | ||||||||||||||||||||||||
Sbjct: 137034 ccctgccggcggaggttcgcgacggtgatggccctctggtcctc 136991



to top

>dbj|AK059825.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-F04, full
           insert sequence
          Length = 1076

 Score =  153 bits (77), Expect = 7e-34
 Identities = 122/137 (89%)
 Strand = Plus / Minus

                                                                       
Query: 263 atgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatg 322
           |||||||| | |||||| |||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 903 atgtagtataaggggtcaggcagcttgaaggtgcgggcgccctccggcgcgccgaggatg 844

                                                                       
Query: 323 tcgccccactggtcgccgatgttaccgacgatgacatacccggcgtcctgcagcttctgc 382
           || | ||||||||| |||||||| ||||||||||   | || ||||||||||||||||||
Sbjct: 843 tcactccactggtcaccgatgttcccgacgatgatgaagccagcgtcctgcagcttctgc 784

                            
Query: 383 ctctcgccggacttgta 399
           | |||||||||||||||
Sbjct: 783 cgctcgccggacttgta 767



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                 
Query: 448 ccacccagagatcccctggcggcggaggttggtgacggtgatggccctctggtc 501
           |||||| ||||  ||||| ||| ||||||| ||||||||||||| ||| |||||
Sbjct: 703 ccacccggagaatccctgtcggtggaggttcgtgacggtgatggtcctttggtc 650



to top

>ref|XM_477966.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 411

 Score =  151 bits (76), Expect = 3e-33
 Identities = 127/144 (88%)
 Strand = Plus / Minus

                                                                       
Query: 256 ctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgcc 315
           |||||||||||||||||||||||| ||||||||||||||||| || ||||| || || ||
Sbjct: 411 ctagccgatgtagtacatggggtcaggcagcttgaaggtgcgagcgccctccggtgcacc 352

                                                                       
Query: 316 gaggatgtcgccccactggtcgccgatgttaccgacgatgacatacccggcgtcctgcag 375
            | |||||| | ||||||||| |||||||||||||||||||   | ||||||||||||||
Sbjct: 351 caagatgtcactccactggtctccgatgttaccgacgatgatgaagccggcgtcctgcag 292

                                   
Query: 376 cttctgcctctcgccggacttgta 399
           |||||| | |||||||||||||||
Sbjct: 291 cttctgacgctcgccggacttgta 268



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                       
Query: 461 ccctggcggcggaggttggtgacggtgatggccctctggtcctc 504
           ||||| ||||||||||| | ||||||||||||||||||||||||
Sbjct: 191 ccctgccggcggaggttcgcgacggtgatggccctctggtcctc 148



to top

>dbj|AK061404.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-A01, full
           insert sequence
          Length = 1131

 Score =  121 bits (61), Expect = 2e-24
 Identities = 124/145 (85%)
 Strand = Plus / Minus

                                                                       
Query: 255 cctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgc 314
           ||||||||||||||||||||||||| |||||||||||||||||||| ||||| || |  |
Sbjct: 885 cctagccgatgtagtacatggggtccggcagcttgaaggtgcgggcgccctccggtgtac 826

                                                                       
Query: 315 cgaggatgtcgccccactggtcgccgatgttaccgacgatgacatacccggcgtcctgca 374
           |||||||||| | ||| ||||| || |||||||||| ||||    | ||||| |||| ||
Sbjct: 825 cgaggatgtcactccattggtcaccaatgttaccgaggatggtgaaaccggcatcctcca 766

                                    
Query: 375 gcttctgcctctcgccggacttgta 399
           |||| |||| |||||||||||||||
Sbjct: 765 gcttttgccgctcgccggacttgta 741



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 461 ccctggcggcggaggttggtgacggtgatggccctctggtcctc 504
           ||||| ||||||||||| ||||||||||||  ||| ||||||||
Sbjct: 664 ccctgccggcggaggtttgtgacggtgatgttcctttggtcctc 621



to top

>dbj|AK119190.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-H02, full
           insert sequence
          Length = 1112

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 73/82 (89%)
 Strand = Plus / Minus

                                                                       
Query: 302 ccctctggcgcgccgaggatgtcgccccactggtcgccgatgttaccgacgatgacatac 361
           ||||| |||| |||||||||||||  |||||||||||||||||| |||||||||||||| 
Sbjct: 750 ccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacatag 691

                                 
Query: 362 ccggcgtcctgcagcttctgcc 383
           |||||||||   ||||||||||
Sbjct: 690 ccggcgtccacaagcttctgcc 669



to top

>dbj|AK106112.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-D12, full
           insert sequence
          Length = 1105

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 73/82 (89%)
 Strand = Plus / Minus

                                                                       
Query: 302 ccctctggcgcgccgaggatgtcgccccactggtcgccgatgttaccgacgatgacatac 361
           ||||| |||| |||||||||||||  |||||||||||||||||| |||||||||||||| 
Sbjct: 750 ccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacatag 691

                                 
Query: 362 ccggcgtcctgcagcttctgcc 383
           |||||||||   ||||||||||
Sbjct: 690 ccggcgtccacaagcttctgcc 669



to top

>dbj|AK104355.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H04, full
           insert sequence
          Length = 1012

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 73/82 (89%)
 Strand = Plus / Minus

                                                                       
Query: 302 ccctctggcgcgccgaggatgtcgccccactggtcgccgatgttaccgacgatgacatac 361
           ||||| |||| |||||||||||||  |||||||||||||||||| |||||||||||||| 
Sbjct: 750 ccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacatag 691

                                 
Query: 362 ccggcgtcctgcagcttctgcc 383
           |||||||||   ||||||||||
Sbjct: 690 ccggcgtccacaagcttctgcc 669



to top

>dbj|AK104267.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-H12, full
           insert sequence
          Length = 1040

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 73/82 (89%)
 Strand = Plus / Minus

                                                                       
Query: 302 ccctctggcgcgccgaggatgtcgccccactggtcgccgatgttaccgacgatgacatac 361
           ||||| |||| |||||||||||||  |||||||||||||||||| |||||||||||||| 
Sbjct: 750 ccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacatag 691

                                 
Query: 362 ccggcgtcctgcagcttctgcc 383
           |||||||||   ||||||||||
Sbjct: 690 ccggcgtccacaagcttctgcc 669



to top

>dbj|AK104252.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-A07, full
           insert sequence
          Length = 1040

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 73/82 (89%)
 Strand = Plus / Minus

                                                                       
Query: 302 ccctctggcgcgccgaggatgtcgccccactggtcgccgatgttaccgacgatgacatac 361
           ||||| |||| |||||||||||||  |||||||||||||||||| |||||||||||||| 
Sbjct: 750 ccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacatag 691

                                 
Query: 362 ccggcgtcctgcagcttctgcc 383
           |||||||||   ||||||||||
Sbjct: 690 ccggcgtccacaagcttctgcc 669



to top

>dbj|AK104180.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H06, full
           insert sequence
          Length = 1012

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 73/82 (89%)
 Strand = Plus / Minus

                                                                       
Query: 302 ccctctggcgcgccgaggatgtcgccccactggtcgccgatgttaccgacgatgacatac 361
           ||||| |||| |||||||||||||  |||||||||||||||||| |||||||||||||| 
Sbjct: 750 ccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacatag 691

                                 
Query: 362 ccggcgtcctgcagcttctgcc 383
           |||||||||   ||||||||||
Sbjct: 690 ccggcgtccacaagcttctgcc 669



to top

>dbj|AK061507.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-F05, full
           insert sequence
          Length = 1105

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 73/82 (89%)
 Strand = Plus / Minus

                                                                       
Query: 302 ccctctggcgcgccgaggatgtcgccccactggtcgccgatgttaccgacgatgacatac 361
           ||||| |||| |||||||||||||  |||||||||||||||||| |||||||||||||| 
Sbjct: 750 ccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacatag 691

                                 
Query: 362 ccggcgtcctgcagcttctgcc 383
           |||||||||   ||||||||||
Sbjct: 690 ccggcgtccacaagcttctgcc 669



to top

>gb|AC152973.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNOa0076M01, complete sequence
          Length = 36050

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 73/82 (89%)
 Strand = Plus / Plus

                                                                         
Query: 302   ccctctggcgcgccgaggatgtcgccccactggtcgccgatgttaccgacgatgacatac 361
             ||||| |||| |||||||||||||  |||||||||||||||||| |||||||||||||| 
Sbjct: 32795 ccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacatag 32854

                                   
Query: 362   ccggcgtcctgcagcttctgcc 383
             |||||||||   ||||||||||
Sbjct: 32855 ccggcgtccacaagcttctgcc 32876



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                               
Query: 316  gaggatgtcgccccactggtcgccgatgttaccgacgatgacatacccggc 366
            ||||||||||| ||||||||| |||||||| ||||  |||||||| |||||
Sbjct: 6680 gaggatgtcgctccactggtcaccgatgttgccgataatgacatagccggc 6730



to top

>gb|AC152971.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
            OSJNOa0023G10, complete sequence
          Length = 36253

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 73/82 (89%)
 Strand = Plus / Plus

                                                                        
Query: 302  ccctctggcgcgccgaggatgtcgccccactggtcgccgatgttaccgacgatgacatac 361
            ||||| |||| |||||||||||||  |||||||||||||||||| |||||||||||||| 
Sbjct: 6415 ccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacatag 6474

                                  
Query: 362  ccggcgtcctgcagcttctgcc 383
            |||||||||   ||||||||||
Sbjct: 6475 ccggcgtccacaagcttctgcc 6496



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                   
Query: 314   ccgaggatgtcgccccactggtcgccgatgttaccgacgatgacatacccggcg 367
             |||||||| |||| ||| ||||| ||||||||||||||||||||||| ||||||
Sbjct: 25538 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 25591



to top

>gb|AC148611.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1007D10,
             complete sequence
          Length = 153366

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                         
Query: 284   agcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgccccactggtcgccgatg 343
             ||||||||||||||||| ||| | | || |||||||| ||||| ||||||||| ||||||
Sbjct: 86069 agcttgaaggtgcgggctcccgccgccgggccgaggaggtcgctccactggtcaccgatg 86128

                              
Query: 344   ttaccgacgatgacata 360
             |||||||| ||| ||||
Sbjct: 86129 ttaccgacaatggcata 86145



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 76/91 (83%)
 Strand = Plus / Plus

                                                                          
Query: 266    tagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcg 325
              ||||||||||||| ||| | ||| |||||||||  ||| || |||| || | ||||||||
Sbjct: 103264 tagtacatggggttggggaacttaaaggtgcggcaaccatccggcgagcggcggatgtcg 103323

                                             
Query: 326    ccccactggtcgccgatgttaccgacgatga 356
                |||||||||||| ||||| ||||||||||
Sbjct: 103324 ttccactggtcgccaatgttgccgacgatga 103354



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                                 
Query: 316    gaggatgtcgccccactggtcgccgatgttaccgacgatgacatacccggc 366
              ||||||||||| ||||||||| |||||||| ||||  |||||||| |||||
Sbjct: 139023 gaggatgtcgctccactggtcaccgatgttgccgataatgacatagccggc 139073



to top

>gb|AC093489.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1116_A10,
             complete sequence
          Length = 102275

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                         
Query: 284   agcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgccccactggtcgccgatg 343
             ||||||||||||||||| ||| | | || |||||||| ||||| ||||||||| ||||||
Sbjct: 84909 agcttgaaggtgcgggctcccgccgccgggccgaggaggtcgctccactggtcaccgatg 84968

                              
Query: 344   ttaccgacgatgacata 360
             |||||||| ||| ||||
Sbjct: 84969 ttaccgacaatggcata 84985



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 76/91 (83%)
 Strand = Plus / Plus

                                                                          
Query: 266    tagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcg 325
              ||||||||||||| ||| | ||| |||||||||  ||| || |||| || | ||||||||
Sbjct: 102104 tagtacatggggttggggaacttaaaggtgcggcaaccatccggcgagcggcggatgtcg 102163

                                             
Query: 326    ccccactggtcgccgatgttaccgacgatga 356
                |||||||||||| ||||| ||||||||||
Sbjct: 102164 ttccactggtcgccaatgttgccgacgatga 102194



to top

>dbj|AK109335.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-C11, full
           insert sequence
          Length = 1168

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                 
Query: 314 ccgaggatgtcgccccactggtcgccgatgttaccgacgatgacatacccggcg 367
           |||||||| |||| ||| ||||| ||||||||||||||||||||||| ||||||
Sbjct: 786 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 733



to top

>dbj|AK104519.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-D05, full
           insert sequence
          Length = 1081

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                 
Query: 314 ccgaggatgtcgccccactggtcgccgatgttaccgacgatgacatacccggcg 367
           |||||||| |||| ||| ||||| ||||||||||||||||||||||| ||||||
Sbjct: 786 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 733



to top

>dbj|AK104460.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-B10, full
           insert sequence
          Length = 1081

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                 
Query: 314 ccgaggatgtcgccccactggtcgccgatgttaccgacgatgacatacccggcg 367
           |||||||| |||| ||| ||||| ||||||||||||||||||||||| ||||||
Sbjct: 786 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 733



to top

>dbj|AK104246.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-E04, full
           insert sequence
          Length = 1081

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                 
Query: 314 ccgaggatgtcgccccactggtcgccgatgttaccgacgatgacatacccggcg 367
           |||||||| |||| ||| ||||| ||||||||||||||||||||||| ||||||
Sbjct: 786 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 733



to top

>dbj|AK060968.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-C05, full
           insert sequence
          Length = 1096

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                 
Query: 314 ccgaggatgtcgccccactggtcgccgatgttaccgacgatgacatacccggcg 367
           |||||||| |||| ||| ||||| ||||||||||||||||||||||| ||||||
Sbjct: 786 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 733



to top

>dbj|AK104624.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-A08, full
           insert sequence
          Length = 1051

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 76/91 (83%)
 Strand = Plus / Minus

                                                                       
Query: 266 tagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcg 325
           ||||||||||||| ||| | ||| |||||||||  ||| || |||| || | ||||||||
Sbjct: 794 tagtacatggggttggggaacttaaaggtgcggcaaccatccggcgagcggcggatgtcg 735

                                          
Query: 326 ccccactggtcgccgatgttaccgacgatga 356
             |||||||||||| ||||| ||||||||||
Sbjct: 734 ttccactggtcgccaatgttgccgacgatga 704



to top

>dbj|AK104203.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-C10, full
           insert sequence
          Length = 1053

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 76/91 (83%)
 Strand = Plus / Minus

                                                                       
Query: 266 tagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcg 325
           ||||||||||||| ||| | ||| |||||||||  ||| || |||| || | ||||||||
Sbjct: 796 tagtacatggggttggggaacttaaaggtgcggcaaccatccggcgagcggcggatgtcg 737

                                          
Query: 326 ccccactggtcgccgatgttaccgacgatga 356
             |||||||||||| ||||| ||||||||||
Sbjct: 736 ttccactggtcgccaatgttgccgacgatga 706



to top

>dbj|AK067327.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099D13, full
           insert sequence
          Length = 1059

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 76/91 (83%)
 Strand = Plus / Minus

                                                                       
Query: 266 tagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcg 325
           ||||||||||||| ||| | ||| |||||||||  ||| || |||| || | ||||||||
Sbjct: 802 tagtacatggggttggggaacttaaaggtgcggcaaccatccggcgagcggcggatgtcg 743

                                          
Query: 326 ccccactggtcgccgatgttaccgacgatga 356
             |||||||||||| ||||| ||||||||||
Sbjct: 742 ttccactggtcgccaatgttgccgacgatga 712



to top

>dbj|AK060874.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-A01, full
           insert sequence
          Length = 1074

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 76/91 (83%)
 Strand = Plus / Minus

                                                                       
Query: 266 tagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcg 325
           ||||||||||||| ||| | ||| |||||||||  ||| || |||| || | ||||||||
Sbjct: 795 tagtacatggggttggggaacttaaaggtgcggcaaccatccggcgagcggcggatgtcg 736

                                          
Query: 326 ccccactggtcgccgatgttaccgacgatga 356
             |||||||||||| ||||| ||||||||||
Sbjct: 735 ttccactggtcgccaatgttgccgacgatga 705



to top

>ref|NM_189664.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 912

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 64/76 (84%)
 Strand = Plus / Minus

                                                                       
Query: 275 gggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgccccactgg 334
           |||| ||||||||||||||| |||   ||||| |||| ||| || | ||||| |||||||
Sbjct: 821 gggttgggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactgg 762

                           
Query: 335 tcgccgatgttaccga 350
           ||||||||||| ||||
Sbjct: 761 tcgccgatgttgccga 746



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 64/76 (84%)
 Strand = Plus / Plus

                                                                           
Query: 275     gggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgccccactgg 334
               |||| ||||||||||||||| |||   ||||| |||| ||| || | ||||| |||||||
Sbjct: 4871431 gggttgggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactgg 4871490

                               
Query: 335     tcgccgatgttaccga 350
               ||||||||||| ||||
Sbjct: 4871491 tcgccgatgttgccga 4871506



to top

>dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0710E05
          Length = 179714

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 64/76 (84%)
 Strand = Plus / Plus

                                                                          
Query: 275    gggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgccccactgg 334
              |||| ||||||||||||||| |||   ||||| |||| ||| || | ||||| |||||||
Sbjct: 116080 gggttgggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactgg 116139

                              
Query: 335    tcgccgatgttaccga 350
              ||||||||||| ||||
Sbjct: 116140 tcgccgatgttgccga 116155



to top

>dbj|AK109404.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-E06, full
           insert sequence
          Length = 1095

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 64/76 (84%)
 Strand = Plus / Minus

                                                                       
Query: 275 gggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgccccactgg 334
           |||| ||||||||||||||| |||   ||||| |||| ||| || | ||||| |||||||
Sbjct: 844 gggttgggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactgg 785

                           
Query: 335 tcgccgatgttaccga 350
           ||||||||||| ||||
Sbjct: 784 tcgccgatgttgccga 769



to top

>dbj|AK104471.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D10, full
           insert sequence
          Length = 1094

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 64/76 (84%)
 Strand = Plus / Minus

                                                                       
Query: 275 gggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgccccactgg 334
           |||| ||||||||||||||| |||   ||||| |||| ||| || | ||||| |||||||
Sbjct: 843 gggttgggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactgg 784

                           
Query: 335 tcgccgatgttaccga 350
           ||||||||||| ||||
Sbjct: 783 tcgccgatgttgccga 768



to top

>dbj|AK104183.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C11, full
           insert sequence
          Length = 1095

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 64/76 (84%)
 Strand = Plus / Minus

                                                                       
Query: 275 gggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgccccactgg 334
           |||| ||||||||||||||| |||   ||||| |||| ||| || | ||||| |||||||
Sbjct: 844 gggttgggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactgg 785

                           
Query: 335 tcgccgatgttaccga 350
           ||||||||||| ||||
Sbjct: 784 tcgccgatgttgccga 769



to top

>dbj|AK100363.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083N07, full
            insert sequence
          Length = 1308

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 64/76 (84%)
 Strand = Plus / Minus

                                                                        
Query: 275  gggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgccccactgg 334
            |||| ||||||||||||||| |||   ||||| |||| ||| || | ||||| |||||||
Sbjct: 1057 gggttgggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactgg 998

                            
Query: 335  tcgccgatgttaccga 350
            ||||||||||| ||||
Sbjct: 997  tcgccgatgttgccga 982



to top

>dbj|AK061466.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-C05, full
           insert sequence
          Length = 1095

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 64/76 (84%)
 Strand = Plus / Minus

                                                                       
Query: 275 gggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgccccactgg 334
           |||| ||||||||||||||| |||   ||||| |||| ||| || | ||||| |||||||
Sbjct: 844 gggttgggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactgg 785

                           
Query: 335 tcgccgatgttaccga 350
           ||||||||||| ||||
Sbjct: 784 tcgccgatgttgccga 769



to top

>dbj|AK060964.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-B05, full
           insert sequence
          Length = 1114

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 64/76 (84%)
 Strand = Plus / Minus

                                                                       
Query: 275 gggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgccccactgg 334
           |||| ||||||||||||||| |||   ||||| |||| ||| || | ||||| |||||||
Sbjct: 844 gggttgggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactgg 785

                           
Query: 335 tcgccgatgttaccga 350
           ||||||||||| ||||
Sbjct: 784 tcgccgatgttgccga 769



to top

>dbj|AK061489.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-B02, full
           insert sequence
          Length = 1100

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                              
Query: 316 gaggatgtcgccccactggtcgccgatgttaccgacgatgacatacccggc 366
           ||||||||||| ||||||||| |||||||| ||||  |||||||| |||||
Sbjct: 760 gaggatgtcgctccactggtcaccgatgttgccgataatgacatagccggc 710



to top

>emb|AL356107.21| Human DNA sequence from clone RP11-484D5 on chromosome 13 Contains the
             gene for a novel protein similar to transforming growth
             factor beta-stimulated protein (TSC-22),  SMARCE1 (SWI/SNF
             related, matrix associated, actin dependent regulator of
             chromatin, subfamily e, member 1 ) pseudogene and a CpG
             island, complete sequence
          Length = 140499

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 27    aatagagcaaaaagaaaaacag 48
             ||||||||||||||||||||||
Sbjct: 57015 aatagagcaaaaagaaaaacag 57036



to top

>gb|AC009400.4|ATAC009400 Arabidopsis thaliana chromosome III BAC F14P13 genomic sequence,
             complete sequence
          Length = 87937

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 28    atagagcaaaaagaaaaacag 48
             |||||||||||||||||||||
Sbjct: 76846 atagagcaaaaagaaaaacag 76826



to top

>emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete genome; segment 5/29
          Length = 339650

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 311    gcgccgaggatgtcgccccac 331
              |||||||||||||||||||||
Sbjct: 291850 gcgccgaggatgtcgccccac 291870



to top

>gb|AC134585.6| Mus musculus BAC clone RP23-302F9 from 8, complete sequence
          Length = 249251

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 481    gacggtgatggccctctggtc 501
              |||||||||||||||||||||
Sbjct: 208833 gacggtgatggccctctggtc 208813



to top

>gb|AC167976.4| Mus musculus BAC clone RP23-167L5 from chromosome 3, complete sequence
          Length = 211791

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 23     ttgtaatagagcaaaaagaa 42
              ||||||||||||||||||||
Sbjct: 117796 ttgtaatagagcaaaaagaa 117777



to top

>ref|NM_193052.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1491

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 377 ttctgcctctcgccggactt 396
           ||||||||||||||||||||
Sbjct: 739 ttctgcctctcgccggactt 758



to top

>ref|NM_193043.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1374

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 377  ttctgcctctcgccggactt 396
            ||||||||||||||||||||
Sbjct: 1204 ttctgcctctcgccggactt 1223



to top

>gb|AC118201.8| Mus musculus chromosome 7, clone RP23-339M11, complete sequence
          Length = 194241

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 124    caagctctcaacaatggaaa 143
              ||||||||||||||||||||
Sbjct: 189390 caagctctcaacaatggaaa 189371



to top

>gb|AC132483.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0014C03,
              complete sequence
          Length = 143739

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 34     caaaaagaaaaacagcataa 53
              ||||||||||||||||||||
Sbjct: 106539 caaaaagaaaaacagcataa 106520



to top

>ref|XM_425961.1| PREDICTED: Gallus gallus similar to multiple myeloma transforming
           gene 2 (LOC428400), mRNA
          Length = 828

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 462 cctggcggcggaggttggtgacgg 485
           ||||||||||||||| ||||||||
Sbjct: 109 cctggcggcggaggtgggtgacgg 86



to top

>gb|DQ481666.1| Takifugu rubripes HoxBb gene cluster, complete sequence
          Length = 130146

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 368    tcctgcagcttctgcctctc 387
              ||||||||||||||||||||
Sbjct: 108648 tcctgcagcttctgcctctc 108629



to top

>gb|AC134932.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0092G21, complete sequence
          Length = 151267

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    caaaaagaaaaacagcataa 53
             ||||||||||||||||||||
Sbjct: 15794 caaaaagaaaaacagcataa 15775



to top

>gb|AC147153.2| Mus musculus chromosome y clone RP24-373C15, complete sequence
          Length = 147194

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 32    agcaaaaagaaaaacagcat 51
             ||||||||||||||||||||
Sbjct: 97467 agcaaaaagaaaaacagcat 97448



to top

>gb|AC159816.2| Mus musculus BAC clone RP23-321A19 from chromosome 9, complete sequence
          Length = 191274

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    caaaaagaaaaacagcataa 53
             ||||||||||||||||||||
Sbjct: 89419 caaaaagaaaaacagcataa 89400



to top

>gb|AC158213.4| Mus musculus chromosome 7, clone RP24-253H20, complete sequence
          Length = 175873

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 124   caagctctcaacaatggaaa 143
             ||||||||||||||||||||
Sbjct: 27587 caagctctcaacaatggaaa 27568



to top

>gb|AC090525.8| Homo sapiens 12 BAC RP11-73B8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 174576

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 126   agctctcaacaatggaaatg 145
             ||||||||||||||||||||
Sbjct: 45528 agctctcaacaatggaaatg 45547



to top

>emb|AL645544.16| Mouse DNA sequence from clone RP23-327M13 on chromosome 1 Contains the
              gene for an ortholog of human amyotrophic lateral sclerosis
              2 (juvenile) chromosome region, candidate 19 (ALS2CR19),
              the 3' end of a novel gene and two CpG islands, complete
              sequence
          Length = 216046

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 32     agcaaaaagaaaaacagcat 51
              ||||||||||||||||||||
Sbjct: 159754 agcaaaaagaaaaacagcat 159735



to top

>emb|AL645946.6| Mouse DNA sequence from clone DN-276O13 on chromosome 1 Contains part
             of the ortholog of human amyotrophic lateral sclerosis 2
             (juvenile) chromosome region candidate 19 ALS2CR19
             (2810455B10RIK 6030439I24RIK 2010002N16RIK), and the 3'
             end of a novel gene (4930448K12RIK 4930412B09RIK),
             complete sequence
          Length = 140936

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 32    agcaaaaagaaaaacagcat 51
             ||||||||||||||||||||
Sbjct: 86874 agcaaaaagaaaaacagcat 86855



to top

>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 278     tcgggcagcttgaaggtgcgggcaccct 305
               |||||||||||||||| |||||| ||||
Sbjct: 1551158 tcgggcagcttgaaggcgcgggcgccct 1551185



to top

>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome
          Length = 4171146

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 473     aggttggtgacggtgatggc 492
               ||||||||||||||||||||
Sbjct: 1566505 aggttggtgacggtgatggc 1566486



to top

>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012
          Length = 2668010

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 47      agcataacaaagatccattg 66
               ||||||||||||||||||||
Sbjct: 1378777 agcataacaaagatccattg 1378796



to top

>gb|AC021860.6| Homo sapiens BAC clone RP11-617D20 from 4, complete sequence
          Length = 148045

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 28    atagagcaaaaagaaaaaca 47
             ||||||||||||||||||||
Sbjct: 54741 atagagcaaaaagaaaaaca 54722



to top

>dbj|AK157470.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
            library, clone:F830218A04 product:hypothetical protein,
            full insert sequence
          Length = 3588

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 32   agcaaaaagaaaaacagcat 51
            ||||||||||||||||||||
Sbjct: 1751 agcaaaaagaaaaacagcat 1732



to top

>emb|BX950605.2| Gallus gallus finished cDNA, clone ChEST529k5
          Length = 536

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 462 cctggcggcggaggttggtgacgg 485
           ||||||||||||||| ||||||||
Sbjct: 195 cctggcggcggaggtgggtgacgg 172



to top

>dbj|AK050953.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:D030043H03
           product:unclassifiable, full insert sequence
          Length = 2047

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 32  agcaaaaagaaaaacagcat 51
           ||||||||||||||||||||
Sbjct: 211 agcaaaaagaaaaacagcat 192



to top

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 101      taattcatagtagcaattaa 120
                ||||||||||||||||||||
Sbjct: 22025728 taattcatagtagcaattaa 22025709



to top

>emb|BX934717.1| Gallus gallus finished cDNA, clone ChEST114j14
          Length = 532

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 462 cctggcggcggaggttggtgacgg 485
           ||||||||||||||| ||||||||
Sbjct: 191 cctggcggcggaggtgggtgacgg 168



to top

>ref|XM_231590.3| PREDICTED: Rattus norvegicus plexin A4 (predicted)
           (Plxna4_predicted), mRNA
          Length = 7451

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 237 cggccgagccagaggcggcc 256
           ||||||||||||||||||||
Sbjct: 42  cggccgagccagaggcggcc 61



to top

>gb|AC010656.7|AC010656 Homo sapiens clone RP11-275E24, complete sequence
          Length = 139032

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 41    aaaaacagcataacaaagat 60
             ||||||||||||||||||||
Sbjct: 28510 aaaaacagcataacaaagat 28529



to top

>dbj|AP004306.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0506F02
          Length = 151612

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 377   ttctgcctctcgccggactt 396
             ||||||||||||||||||||
Sbjct: 50361 ttctgcctctcgccggactt 50342



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 377   ttctgcctctcgccggactt 396
             ||||||||||||||||||||
Sbjct: 15084 ttctgcctctcgccggactt 15103



to top

>dbj|AP004260.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
            clone:P0011H09
          Length = 147992

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 377  ttctgcctctcgccggactt 396
            ||||||||||||||||||||
Sbjct: 6911 ttctgcctctcgccggactt 6892



to top

>emb|CR545466.9| Zebrafish DNA sequence from clone DKEYP-115A10 in linkage group 20,
            complete sequence
          Length = 84525

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 67   attaagcagcatgcaacatc 86
            ||||||||||||||||||||
Sbjct: 6109 attaagcagcatgcaacatc 6090



to top

>dbj|AP004009.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1339_F05
          Length = 132708

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 377    ttctgcctctcgccggactt 396
              ||||||||||||||||||||
Sbjct: 108520 ttctgcctctcgccggactt 108539



to top

>emb|AL163153.4|CNS01RIE Human chromosome 14 DNA sequence BAC R-16O13 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 166562

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 26     taatagagcaaaaagaaaaa 45
              ||||||||||||||||||||
Sbjct: 119461 taatagagcaaaaagaaaaa 119480



to top

>emb|AJ871288.1| Gadus morhua immunoglobulin heavy chain locus, germline DNA
          Length = 11836

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 317  aggatgtcgccccactggtc 336
            ||||||||||||||||||||
Sbjct: 1560 aggatgtcgccccactggtc 1541



to top

>gb|AC174770.1| Gasterosteus aculeatus clone VMRC28-84C03, complete sequence
          Length = 124367

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 363   cggcgtcctgcagcttctgcctct 386
             ||||||||||||||| ||||||||
Sbjct: 10487 cggcgtcctgcagctgctgcctct 10464



to top

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 101      taattcatagtagcaattaa 120
                ||||||||||||||||||||
Sbjct: 21954073 taattcatagtagcaattaa 21954054



to top

>emb|AL831807.7|CNS08CAK Oryza sativa chromosome 12, . BAC OSJNBa0062E22 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 138308

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 101    taattcatagtagcaattaa 120
              ||||||||||||||||||||
Sbjct: 131856 taattcatagtagcaattaa 131837



to top

>gb|AC109165.11| Mus musculus chromosome 5, clone RP23-30B3, complete sequence
          Length = 202377

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 26     taatagagcaaaaagaaaaa 45
              ||||||||||||||||||||
Sbjct: 105164 taatagagcaaaaagaaaaa 105183



to top

>emb|AL512359.2|CNS07EF8 Human chromosome 14 DNA sequence BAC R-286B5 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 157395

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 29     tagagcaaaaagaaaaacag 48
              ||||||||||||||||||||
Sbjct: 132388 tagagcaaaaagaaaaacag 132369


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,042,751
Number of Sequences: 3902068
Number of extensions: 5042751
Number of successful extensions: 94980
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94437
Number of HSP's gapped (non-prelim): 531
length of query: 504
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 482
effective length of database: 17,147,199,772
effective search space: 8264950290104
effective search space used: 8264950290104
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top