ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart35b05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ASH1_YEAST (P34233) Daughter cells HO repressor protein ASH1 29 4.1

>ASH1_YEAST (P34233) Daughter cells HO repressor protein ASH1|
          Length = 588

 Score = 28.9 bits (63), Expect = 4.1
 Identities = 15/34 (44%), Positives = 17/34 (50%)
 Frame = +1

Query: 31  FHKIHTNLWHIIPWVFPPNATAPTNNKRERTNSR 132
           F  +  N W I P V PP  + PTN   ERT  R
Sbjct: 275 FKDLSNNAWSITPPVTPP-MSPPTNRTMERTTLR 307


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,758,427
Number of Sequences: 219361
Number of extensions: 392833
Number of successful extensions: 1442
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1403
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1442
length of database: 80,573,946
effective HSP length: 21
effective length of database: 75,967,365
effective search space used: 1823216760
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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