Clone Name | rbart35a11 |
---|---|
Clone Library Name | barley_pub |
>SELT_ARATH (Q9STZ2) SelT-like protein precursor| Length = 209 Score = 57.4 bits (137), Expect = 2e-08 Identities = 29/42 (69%), Positives = 32/42 (76%) Frame = -2 Query: 493 SSGAFEVYCNGDLVFSKLAEQRFPSEFELRDLIGSRLPSSPF 368 SSGAFEV CNG+LVFSKL E RFP E ELRDLI + + PF Sbjct: 164 SSGAFEVSCNGELVFSKLKEGRFPGEIELRDLISGTM-TKPF 204
>SELT1_CAEEL (Q9U3N5) Putative selT-like protein C35C5.3 precursor| Length = 247 Score = 33.9 bits (76), Expect = 0.24 Identities = 16/37 (43%), Positives = 23/37 (62%) Frame = -2 Query: 493 SSGAFEVYCNGDLVFSKLAEQRFPSEFELRDLIGSRL 383 S+GAFEVY + ++SK+ R PS E LI ++L Sbjct: 191 STGAFEVYLGNEQIWSKIESGRVPSPQEFMQLIDAQL 227
>HSP6_HETGL (Q9BN19) Putative esophageal gland cell secretory protein 6| precursor Length = 244 Score = 33.5 bits (75), Expect = 0.32 Identities = 17/37 (45%), Positives = 22/37 (59%) Frame = -2 Query: 493 SSGAFEVYCNGDLVFSKLAEQRFPSEFELRDLIGSRL 383 S+GAFE+Y + ++SKL R PS EL I S L Sbjct: 187 STGAFEIYIESERIWSKLESGRVPSPPELFQAIDSHL 223
>SELT_DROME (Q9VMV6) SelT-like protein precursor| Length = 198 Score = 31.2 bits (69), Expect = 1.6 Identities = 18/37 (48%), Positives = 22/37 (59%) Frame = -2 Query: 493 SSGAFEVYCNGDLVFSKLAEQRFPSEFELRDLIGSRL 383 SSGAFE+ N V+SKL RFPS L +I + L Sbjct: 148 SSGAFEITLNDVPVWSKLQTGRFPSPEVLFQIIDNHL 184
>LEU3_HANAN (Q9HDQ1) 3-isopropylmalate dehydrogenase (EC 1.1.1.85) (Beta-IPM| dehydrogenase) (IMDH) (3-IPM-DH) Length = 364 Score = 30.0 bits (66), Expect = 3.5 Identities = 13/39 (33%), Positives = 22/39 (56%) Frame = -2 Query: 190 WHETVTDSVTLLYEHLTPVWS*LPDTAMLLVKSPESSRG 74 W +TVT+++ + LT + AM+L+KSP + G Sbjct: 201 WRKTVTETIEKEFPQLTVQHQLIDSAAMILIKSPTTLNG 239
>LEU3_SCHPO (P18869) 3-isopropylmalate dehydrogenase (EC 1.1.1.85) (Beta-IPM| dehydrogenase) (IMDH) (3-IPM-DH) Length = 371 Score = 29.6 bits (65), Expect = 4.6 Identities = 19/50 (38%), Positives = 24/50 (48%) Frame = -2 Query: 190 WHETVTDSVTLLYEHLTPVWS*LPDTAMLLVKSPESSRGSLSPFFCENLF 41 W +TV Y HLT + AMLLVKSP + G + +NLF Sbjct: 201 WRKTVAKIFKEEYPHLTLKNQLIDSAAMLLVKSPRTLNGVV---LTDNLF 247
>LEU3_SORMA (Q6TWC4) 3-isopropylmalate dehydrogenase (EC 1.1.1.85) (Beta-IPM| dehydrogenase) (IMDH) (3-IPM-DH) Length = 368 Score = 28.9 bits (63), Expect = 7.8 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = -2 Query: 190 WHETVTDSVTLLYEHLTPVWS*LPDTAMLLVKSPESSRG 74 W +TVTD ++ + L + AMLLVK+P + G Sbjct: 203 WRKTVTDVISKEFPQLQLEHQLIDSAAMLLVKNPRALNG 241
>LEU3_NEUCR (P34738) 3-isopropylmalate dehydrogenase (EC 1.1.1.85) (Beta-IPM| dehydrogenase) (IMDH) (3-IPM-DH) Length = 368 Score = 28.9 bits (63), Expect = 7.8 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = -2 Query: 190 WHETVTDSVTLLYEHLTPVWS*LPDTAMLLVKSPESSRG 74 W +TVTD ++ + L + AMLLVK+P + G Sbjct: 203 WRKTVTDVISKEFPQLQLEHQLIDSAAMLLVKNPRALNG 241 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 67,462,212 Number of Sequences: 219361 Number of extensions: 1267664 Number of successful extensions: 2527 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 2481 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2527 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3465624120 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)