ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart35a11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_475399.1| Oryza sativa (japonica cultivar-group), predic... 145 2e-31
2dbj|AK061873.1| Oryza sativa (japonica cultivar-group) cDNA clon... 145 2e-31
3dbj|AK098945.1| Oryza sativa (japonica cultivar-group) cDNA clon... 145 2e-31
4ref|NM_190451.1| Oryza sativa (japonica cultivar-group), predic... 117 4e-23
5dbj|AK120744.1| Oryza sativa (japonica cultivar-group) cDNA clon... 117 4e-23
6dbj|AK060017.1| Oryza sativa (japonica cultivar-group) cDNA clon... 117 4e-23
7dbj|AK068980.1| Oryza sativa (japonica cultivar-group) cDNA clon... 109 9e-21
8gb|AY596588.1| Saccharum officinarum clone SCUTLR2030F03, comple... 92 2e-15
9gb|AC121361.3| Oryza sativa (japonica cultivar-group) chromosome... 84 5e-13
10gb|AC108503.4| Oryza sativa (japonica cultivar-group) chromosome... 84 5e-13
11dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 84 5e-13
12gb|AY106423.1| Zea mays PCO101267 mRNA sequence 80 8e-12
13dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 68 3e-08
14dbj|AP003252.4| Oryza sativa (japonica cultivar-group) genomic D... 68 3e-08
15dbj|AP004366.3| Oryza sativa (japonica cultivar-group) genomic D... 68 3e-08
16ref|NM_114598.2| Arabidopsis thaliana unknown protein AT3G47300 ... 52 0.002
17gb|BT010507.1| Arabidopsis thaliana At3g47300 gene, complete cds 52 0.002
18emb|AL096860.1|ATT21L8 Arabidopsis thaliana DNA chromosome 3, BA... 52 0.002
19dbj|AK176362.1| Arabidopsis thaliana mRNA for putative protein, ... 52 0.002
20dbj|AK176038.1| Arabidopsis thaliana mRNA for putative protein, ... 52 0.002
21dbj|AK175455.1| Arabidopsis thaliana mRNA for putative protein, ... 52 0.002
22gb|BT016302.1| Zea mays clone Contig135 mRNA sequence 50 0.007
23gb|AY109230.1| Zea mays PCO070603 mRNA sequence 50 0.007
24emb|BX825283.1|CNS0A6EY Arabidopsis thaliana Full-length cDNA Co... 44 0.43
25emb|AL513342.7| Human DNA sequence from clone RP11-96F14 on chro... 42 1.7
26emb|BX323087.9| Zebrafish DNA sequence from clone CH211-212J22 i... 42 1.7
27gb|AC123031.4| Mus musculus BAC clone RP24-576D11 from chromosom... 40 6.7
28emb|BX294191.4| Zebrafish DNA sequence from clone DKEY-24K20 in ... 40 6.7
29dbj|AP004915.1| Lotus japonicus genomic DNA, chromosome 4, clone... 40 6.7
30emb|AL732507.6| Mouse DNA sequence from clone RP23-67E13 on chro... 40 6.7
31gb|DQ241776.1| Exidia uvapsassa isolate AFTOL-ID 461 internal tr... 40 6.7 
>ref|XM_475399.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 774

 Score =  145 bits (73), Expect = 2e-31
 Identities = 136/157 (86%)
 Strand = Plus / Minus

                                                                       
Query: 338 ctaagacaaggcgtttcccatgtttttcccgaatggagaagatggcagtctgctgccgat 397
           |||||||||||  |||||||  |||||||| |   |||||  ||| | |||||||  |||
Sbjct: 774 ctaagacaaggattttcccacatttttcccaaccagagaatctggtaatctgctgttgat 715

                                                                       
Query: 398 gagatcacgcagctcaaactcgctagggaacctctgttcggctaacttcgagaaaaccaa 457
           |||||| ||||| |||||||| |||||||||||||| || ||||| || |||||||||||
Sbjct: 714 gagatcccgcagttcaaactcactagggaacctctgctcagctaattttgagaaaaccaa 655

                                                
Query: 458 atctccattgcagtaaacttcaaaggcaccagaactt 494
           |||||||||||||||||||||||||||||||||||||
Sbjct: 654 atctccattgcagtaaacttcaaaggcaccagaactt 618
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>dbj|AK061873.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-A06, full
           insert sequence
          Length = 1123

 Score =  145 bits (73), Expect = 2e-31
 Identities = 136/157 (86%)
 Strand = Plus / Minus

                                                                       
Query: 338 ctaagacaaggcgtttcccatgtttttcccgaatggagaagatggcagtctgctgccgat 397
           |||||||||||  |||||||  |||||||| |   |||||  ||| | |||||||  |||
Sbjct: 853 ctaagacaaggattttcccacatttttcccaaccagagaatctggtaatctgctgttgat 794

                                                                       
Query: 398 gagatcacgcagctcaaactcgctagggaacctctgttcggctaacttcgagaaaaccaa 457
           |||||| ||||| |||||||| |||||||||||||| || ||||| || |||||||||||
Sbjct: 793 gagatcccgcagttcaaactcactagggaacctctgctcagctaattttgagaaaaccaa 734

                                                
Query: 458 atctccattgcagtaaacttcaaaggcaccagaactt 494
           |||||||||||||||||||||||||||||||||||||
Sbjct: 733 atctccattgcagtaaacttcaaaggcaccagaactt 697
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>dbj|AK098945.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050H09, full
           insert sequence
          Length = 1093

 Score =  145 bits (73), Expect = 2e-31
 Identities = 136/157 (86%)
 Strand = Plus / Minus

                                                                       
Query: 338 ctaagacaaggcgtttcccatgtttttcccgaatggagaagatggcagtctgctgccgat 397
           |||||||||||  |||||||  |||||||| |   |||||  ||| | |||||||  |||
Sbjct: 865 ctaagacaaggattttcccacatttttcccaaccagagaatctggtaatctgctgttgat 806

                                                                       
Query: 398 gagatcacgcagctcaaactcgctagggaacctctgttcggctaacttcgagaaaaccaa 457
           |||||| ||||| |||||||| |||||||||||||| || ||||| || |||||||||||
Sbjct: 805 gagatcccgcagttcaaactcactagggaacctctgctcagctaattttgagaaaaccaa 746

                                                
Query: 458 atctccattgcagtaaacttcaaaggcaccagaactt 494
           |||||||||||||||||||||||||||||||||||||
Sbjct: 745 atctccattgcagtaaacttcaaaggcaccagaactt 709
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>ref|NM_190451.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 699

 Score =  117 bits (59), Expect = 4e-23
 Identities = 116/135 (85%)
 Strand = Plus / Minus

                                                                       
Query: 360 tttttcccgaatggagaagatggcagtctgctgccgatgagatcacgcagctcaaactcg 419
           |||||||||||| |||||  ||| |  ||| |||| ||||| || || ||||||||||||
Sbjct: 677 tttttcccgaattgagaatctggtaacctgttgccaatgagctcccgtagctcaaactcg 618

                                                                       
Query: 420 ctagggaacctctgttcggctaacttcgagaaaaccaaatctccattgcagtaaacttca 479
           || || || |||||||||| ||| || ||||||||||| | |||||||||||||||||||
Sbjct: 617 ctgggaaatctctgttcggataattttgagaaaaccaattgtccattgcagtaaacttca 558

                          
Query: 480 aaggcaccagaactt 494
           |||||||||||||||
Sbjct: 557 aaggcaccagaactt 543
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>dbj|AK120744.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004G13, full
            insert sequence
          Length = 1951

 Score =  117 bits (59), Expect = 4e-23
 Identities = 116/135 (85%)
 Strand = Plus / Minus

                                                                        
Query: 360  tttttcccgaatggagaagatggcagtctgctgccgatgagatcacgcagctcaaactcg 419
            |||||||||||| |||||  ||| |  ||| |||| ||||| || || ||||||||||||
Sbjct: 1775 tttttcccgaattgagaatctggtaacctgttgccaatgagctcccgtagctcaaactcg 1716

                                                                        
Query: 420  ctagggaacctctgttcggctaacttcgagaaaaccaaatctccattgcagtaaacttca 479
            || || || |||||||||| ||| || ||||||||||| | |||||||||||||||||||
Sbjct: 1715 ctgggaaatctctgttcggataattttgagaaaaccaattgtccattgcagtaaacttca 1656

                           
Query: 480  aaggcaccagaactt 494
            |||||||||||||||
Sbjct: 1655 aaggcaccagaactt 1641
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>dbj|AK060017.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-G02, full
           insert sequence
          Length = 1076

 Score =  117 bits (59), Expect = 4e-23
 Identities = 116/135 (85%)
 Strand = Plus / Minus

                                                                       
Query: 360 tttttcccgaatggagaagatggcagtctgctgccgatgagatcacgcagctcaaactcg 419
           |||||||||||| |||||  ||| |  ||| |||| ||||| || || ||||||||||||
Sbjct: 760 tttttcccgaattgagaatctggtaacctgttgccaatgagctcccgtagctcaaactcg 701

                                                                       
Query: 420 ctagggaacctctgttcggctaacttcgagaaaaccaaatctccattgcagtaaacttca 479
           || || || |||||||||| ||| || ||||||||||| | |||||||||||||||||||
Sbjct: 700 ctgggaaatctctgttcggataattttgagaaaaccaattgtccattgcagtaaacttca 641

                          
Query: 480 aaggcaccagaactt 494
           |||||||||||||||
Sbjct: 640 aaggcaccagaactt 626
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>dbj|AK068980.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002I10, full
           insert sequence
          Length = 952

 Score =  109 bits (55), Expect = 9e-21
 Identities = 115/135 (85%)
 Strand = Plus / Minus

                                                                       
Query: 360 tttttcccgaatggagaagatggcagtctgctgccgatgagatcacgcagctcaaactcg 419
           |||||||||||| |||||  ||| |  ||| |||| ||||| || || ||||||||||||
Sbjct: 636 tttttcccgaattgagaatctggtaacctgttgccaatgagctcccgtagctcaaactcg 577

                                                                       
Query: 420 ctagggaacctctgttcggctaacttcgagaaaaccaaatctccattgcagtaaacttca 479
           || || || |||||||||| ||| || ||||||||||| | |||||||||||||||||||
Sbjct: 576 ctgggaaatctctgttcggataattttgagaaaaccaattgtccattgcagtaaacttca 517

                          
Query: 480 aaggcaccagaactt 494
           ||| |||||||||||
Sbjct: 516 aagacaccagaactt 502
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>gb|AY596588.1| Saccharum officinarum clone SCUTLR2030F03, complete sequence
          Length = 1185

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 94/110 (85%)
 Strand = Plus / Plus

                                                                       
Query: 381 ggcagtctgctgccgatgagatcacgcagctcaaactcgctagggaacctctgttcggct 440
           |||| ||||||||| || || || | || ||| ||||| |||||||||||||| || || 
Sbjct: 371 ggcaatctgctgccaataaggtccctcaactcgaactcactagggaacctctgctcagca 430

                                                             
Query: 441 aacttcgagaaaaccaaatctccattgcagtaaacttcaaaggcaccaga 490
           |  || ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 431 agttttgagaataccaaatctccattgcagtaaacttcaaaggcaccaga 480
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>gb|AC121361.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0009E21,
              complete sequence
          Length = 153214

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 42/42 (100%)
 Strand = Plus / Minus

                                                        
Query: 453    accaaatctccattgcagtaaacttcaaaggcaccagaactt 494
              ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145116 accaaatctccattgcagtaaacttcaaaggcaccagaactt 145075



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 97/118 (82%)
 Strand = Plus / Minus

                                                                          
Query: 338    ctaagacaaggcgtttcccatgtttttcccgaatggagaagatggcagtctgctgccgat 397
              |||||||||||  |||||||  |||||||| |   |||||  ||| | |||||||  |||
Sbjct: 145522 ctaagacaaggattttcccacatttttcccaaccagagaatctggtaatctgctgttgat 145463

                                                                        
Query: 398    gagatcacgcagctcaaactcgctagggaacctctgttcggctaacttcgagaaaacc 455
              |||||| ||||| |||||||| |||||||||||||| || ||||| || |||||||||
Sbjct: 145462 gagatcccgcagttcaaactcactagggaacctctgctcagctaattttgagaaaacc 145405
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>gb|AC108503.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1387_F08,
             complete sequence
          Length = 141535

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 42/42 (100%)
 Strand = Plus / Minus

                                                       
Query: 453   accaaatctccattgcagtaaacttcaaaggcaccagaactt 494
             ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99367 accaaatctccattgcagtaaacttcaaaggcaccagaactt 99326



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 97/118 (82%)
 Strand = Plus / Minus

                                                                         
Query: 338   ctaagacaaggcgtttcccatgtttttcccgaatggagaagatggcagtctgctgccgat 397
             |||||||||||  |||||||  |||||||| |   |||||  ||| | |||||||  |||
Sbjct: 99773 ctaagacaaggattttcccacatttttcccaaccagagaatctggtaatctgctgttgat 99714

                                                                       
Query: 398   gagatcacgcagctcaaactcgctagggaacctctgttcggctaacttcgagaaaacc 455
             |||||| ||||| |||||||| |||||||||||||| || ||||| || |||||||||
Sbjct: 99713 gagatcccgcagttcaaactcactagggaacctctgctcagctaattttgagaaaacc 99656
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 42/42 (100%)
 Strand = Plus / Minus

                                                          
Query: 453      accaaatctccattgcagtaaacttcaaaggcaccagaactt 494
                ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22789917 accaaatctccattgcagtaaacttcaaaggcaccagaactt 22789876



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 97/118 (82%)
 Strand = Plus / Minus

                                                                            
Query: 338      ctaagacaaggcgtttcccatgtttttcccgaatggagaagatggcagtctgctgccgat 397
                |||||||||||  |||||||  |||||||| |   |||||  ||| | |||||||  |||
Sbjct: 22790323 ctaagacaaggattttcccacatttttcccaaccagagaatctggtaatctgctgttgat 22790264

                                                                          
Query: 398      gagatcacgcagctcaaactcgctagggaacctctgttcggctaacttcgagaaaacc 455
                |||||| ||||| |||||||| |||||||||||||| || ||||| || |||||||||
Sbjct: 22790263 gagatcccgcagttcaaactcactagggaacctctgctcagctaattttgagaaaacc 22790206
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>gb|AY106423.1| Zea mays PCO101267 mRNA sequence
          Length = 791

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 43/44 (97%)
 Strand = Plus / Minus

                                                       
Query: 447 gagaaaaccaaatctccattgcagtaaacttcaaaggcaccaga 490
           ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 768 gagaataccaaatctccattgcagtaaacttcaaaggcaccaga 725
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 34/34 (100%)
 Strand = Plus / Plus

                                                  
Query: 461      tccattgcagtaaacttcaaaggcaccagaactt 494
                ||||||||||||||||||||||||||||||||||
Sbjct: 35604280 tccattgcagtaaacttcaaaggcaccagaactt 35604313



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 79/96 (82%)
 Strand = Plus / Plus

                                                                            
Query: 360      tttttcccgaatggagaagatggcagtctgctgccgatgagatcacgcagctcaaactcg 419
                |||||||||||| |||||  ||| |  ||| |||| ||||| || || ||||||||||||
Sbjct: 35603196 tttttcccgaattgagaatctggtaacctgttgccaatgagctcccgtagctcaaactcg 35603255

                                                    
Query: 420      ctagggaacctctgttcggctaacttcgagaaaacc 455
                || || || |||||||||| ||| || |||||||||
Sbjct: 35603256 ctgggaaatctctgttcggataattttgagaaaacc 35603291
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>dbj|AP003252.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0446G04
          Length = 143515

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 34/34 (100%)
 Strand = Plus / Plus

                                                
Query: 461    tccattgcagtaaacttcaaaggcaccagaactt 494
              ||||||||||||||||||||||||||||||||||
Sbjct: 134467 tccattgcagtaaacttcaaaggcaccagaactt 134500



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 79/96 (82%)
 Strand = Plus / Plus

                                                                          
Query: 360    tttttcccgaatggagaagatggcagtctgctgccgatgagatcacgcagctcaaactcg 419
              |||||||||||| |||||  ||| |  ||| |||| ||||| || || ||||||||||||
Sbjct: 133383 tttttcccgaattgagaatctggtaacctgttgccaatgagctcccgtagctcaaactcg 133442

                                                  
Query: 420    ctagggaacctctgttcggctaacttcgagaaaacc 455
              || || || |||||||||| ||| || |||||||||
Sbjct: 133443 ctgggaaatctctgttcggataattttgagaaaacc 133478
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>dbj|AP004366.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0460C04
          Length = 189043

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 34/34 (100%)
 Strand = Plus / Plus

                                              
Query: 461  tccattgcagtaaacttcaaaggcaccagaactt 494
            ||||||||||||||||||||||||||||||||||
Sbjct: 7617 tccattgcagtaaacttcaaaggcaccagaactt 7650



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 79/96 (82%)
 Strand = Plus / Plus

                                                                        
Query: 360  tttttcccgaatggagaagatggcagtctgctgccgatgagatcacgcagctcaaactcg 419
            |||||||||||| |||||  ||| |  ||| |||| ||||| || || ||||||||||||
Sbjct: 6533 tttttcccgaattgagaatctggtaacctgttgccaatgagctcccgtagctcaaactcg 6592

                                                
Query: 420  ctagggaacctctgttcggctaacttcgagaaaacc 455
            || || || |||||||||| ||| || |||||||||
Sbjct: 6593 ctgggaaatctctgttcggataattttgagaaaacc 6628
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>ref|NM_114598.2| Arabidopsis thaliana unknown protein AT3G47300 mRNA, complete cds
          Length = 804

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 453 accaaatctccattgcagtaaacttcaaaggcaccagaactt 494
           ||||| ||||||||||||  ||||||||| ||||||||||||
Sbjct: 530 accaattctccattgcagctaacttcaaaagcaccagaactt 489
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>gb|BT010507.1| Arabidopsis thaliana At3g47300 gene, complete cds
          Length = 630

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 453 accaaatctccattgcagtaaacttcaaaggcaccagaactt 494
           ||||| ||||||||||||  ||||||||| ||||||||||||
Sbjct: 530 accaattctccattgcagctaacttcaaaagcaccagaactt 489
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>emb|AL096860.1|ATT21L8 Arabidopsis thaliana DNA chromosome 3, BAC clone T21L8
          Length = 87224

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                       
Query: 453   accaaatctccattgcagtaaacttcaaaggcaccagaactt 494
             ||||| ||||||||||||  ||||||||| ||||||||||||
Sbjct: 28294 accaattctccattgcagctaacttcaaaagcaccagaactt 28335
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>dbj|AK176362.1| Arabidopsis thaliana mRNA for putative protein, complete cds,
           clone: RAFL24-06-L15
          Length = 945

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 453 accaaatctccattgcagtaaacttcaaaggcaccagaactt 494
           ||||| ||||||||||||  ||||||||| ||||||||||||
Sbjct: 593 accaattctccattgcagctaacttcaaaagcaccagaactt 552
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>dbj|AK176038.1| Arabidopsis thaliana mRNA for putative protein, complete cds,
           clone: RAFL22-76-I04
          Length = 884

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 453 accaaatctccattgcagtaaacttcaaaggcaccagaactt 494
           ||||| ||||||||||||  ||||||||| ||||||||||||
Sbjct: 598 accaattctccattgcagctaacttcaaaagcaccagaactt 557
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>dbj|AK175455.1| Arabidopsis thaliana mRNA for putative protein, complete cds,
           clone: RAFL21-88-D05
          Length = 836

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 453 accaaatctccattgcagtaaacttcaaaggcaccagaactt 494
           ||||| ||||||||||||  ||||||||| ||||||||||||
Sbjct: 567 accaattctccattgcagctaacttcaaaagcaccagaactt 526
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>gb|BT016302.1| Zea mays clone Contig135 mRNA sequence
          Length = 902

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 465 ttgcagtaaacttcaaaggcaccagaact 493
           ||||| |||||||||||||||||||||||
Sbjct: 538 ttgcaataaacttcaaaggcaccagaact 510
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>gb|AY109230.1| Zea mays PCO070603 mRNA sequence
          Length = 1134

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 465 ttgcagtaaacttcaaaggcaccagaact 493
           ||||| |||||||||||||||||||||||
Sbjct: 722 ttgcaataaacttcaaaggcaccagaact 694
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>emb|BX825283.1|CNS0A6EY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL26ZE04 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 759

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 453 accaaatctccattgcagtaaacttcaaaggcaccagaactt 494
           ||||| ||||||||||||   |||||||| ||||||||||||
Sbjct: 499 accaattctccattgcagctcacttcaaaagcaccagaactt 458
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>emb|AL513342.7| Human DNA sequence from clone RP11-96F14 on chromosome 1 Contains part
             of the FMN2 gene for formin 2, complete sequence
          Length = 127208

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 370   atggagaagatggcagtctgc 390
             |||||||||||||||||||||
Sbjct: 32329 atggagaagatggcagtctgc 32309
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>emb|BX323087.9| Zebrafish DNA sequence from clone CH211-212J22 in linkage group 23,
             complete sequence
          Length = 192603

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 30    actcattgagagaataagttc 50
             |||||||||||||||||||||
Sbjct: 99240 actcattgagagaataagttc 99220
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>gb|AC123031.4| Mus musculus BAC clone RP24-576D11 from chromosome 6, complete sequence
          Length = 143926

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 458   atctccattgcagtaaactt 477
             ||||||||||||||||||||
Sbjct: 49789 atctccattgcagtaaactt 49808
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>emb|BX294191.4| Zebrafish DNA sequence from clone DKEY-24K20 in linkage group 5, complete
              sequence
          Length = 185868

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 29     gactcattgagagaataagt 48
              ||||||||||||||||||||
Sbjct: 148682 gactcattgagagaataagt 148663
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>dbj|AP004915.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT16G15, TM0073,
             complete sequence
          Length = 90077

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 28    ggactcattgagagaataag 47
             ||||||||||||||||||||
Sbjct: 13293 ggactcattgagagaataag 13274
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>emb|AL732507.6| Mouse DNA sequence from clone RP23-67E13 on chromosome 2, complete
              sequence
          Length = 197132

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 32     tcattgagagaataagttct 51
              ||||||||||||||||||||
Sbjct: 141763 tcattgagagaataagttct 141782
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>gb|DQ241776.1| Exidia uvapsassa isolate AFTOL-ID 461 internal transcribed spacer
           1, 5.8S ribosomal RNA gene, and internal transcribed
           spacer 2, complete sequence
          Length = 506

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 135 acaggtgtgaggtgttcatacagc 158
           ||||||||||||||||||| ||||
Sbjct: 72  acaggtgtgaggtgttcatgcagc 49


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,715,709
Number of Sequences: 3902068
Number of extensions: 4715709
Number of successful extensions: 60112
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60020
Number of HSP's gapped (non-prelim): 92
length of query: 494
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 472
effective length of database: 17,147,199,772
effective search space: 8093478292384
effective search space used: 8093478292384
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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