>FMT_ERWCT (Q6D001) Methionyl-tRNA formyltransferase (EC 2.1.2.9)|
          Length = 315

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = +3

Query: 366 HGEVELRGGHEEVHGLRRPEQPHHAAQRLQPQPVRHL--QHAL 488
           H +V L  GHE V    +P++P     +L P PV+ L  QH++
Sbjct: 19  HLDVLLSSGHEVVGVFTQPDRPAGRGNKLTPSPVKVLAEQHSI 61

>ILVD_BURPS (Q63WB9) Dihydroxy-acid dehydratase (EC 4.2.1.9) (DAD)|
          Length = 557

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +1

Query: 190 QTEDGQSLSRHLALTRQNEGSSELARRRALCGAEQPR-ARAPLQAHSAVAAPS 345
           Q  D  ++  H  L + N   +ELARRRA      PR  R  L  ++A+A P+
Sbjct: 498 QEGDSITIDAHKLLLQLNVDDAELARRRAAWKQPAPRYTRGVLAKYAALARPA 550

>ILVD_BURMA (Q62LG7) Dihydroxy-acid dehydratase (EC 4.2.1.9) (DAD)|
          Length = 557

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +1

Query: 190 QTEDGQSLSRHLALTRQNEGSSELARRRALCGAEQPR-ARAPLQAHSAVAAPS 345
           Q  D  ++  H  L + N   +ELARRRA      PR  R  L  ++A+A P+
Sbjct: 498 QEGDSITIDAHKLLLQLNVDDAELARRRAAWKQPAPRYTRGVLAKYAALARPA 550

>BACC_BACLI (O68008) Bacitracin synthetase 3 (BA3) [Includes: ATP-dependent|
            isoleucine adenylase (IleA) (Isoleucine activase);
            ATP-dependent D-phenylalanine adenylase (D-PheA)
            (D-phenylalanine activase); ATP-dependent histidine
            adenylase (HisA) (Histidine
          Length = 6359

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 16/62 (25%), Positives = 30/62 (48%)
 Frame = +1

Query: 118  VHKLLAHFVQVITDFTLWQNAHVDQTEDGQSLSRHLALTRQNEGSSELARRRALCGAEQP 297
            V ++ AHFV+V+ D +   +  +DQ E      ++  L R N+  ++    + +C     
Sbjct: 1445 VERMAAHFVRVLEDISKRTDKRLDQIEAMSEDEKNTLLYRFNDTKTDAPTDKTICQLFAE 1504

Query: 298  RA 303
            RA
Sbjct: 1505 RA 1506

>PPE13_MYCTU (Q10540) Hypothetical PPE-family protein PPE13|
          Length = 443

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 16/31 (51%), Positives = 17/31 (54%)
 Frame = +1

Query: 319 AHSAVAAPSLCWPNLCTARWSSAAATRKCTA 411
           A +A AAP L W N  TAR   AAA  K  A
Sbjct: 67  AMAAAAAPYLSWLNAATARAEGAAAGAKAAA 97

>RAD52_ASHGO (Q756F4) DNA repair and recombination protein RAD52|
          Length = 435

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = +1

Query: 193 TEDGQSLSRHLALTRQNEGSSELARRRALCGAEQPRARAPLQAHSAVA 336
           T++   LSR   +T  +EG +   R   L  A +P A  P  AH+A A
Sbjct: 170 TDENNELSRANTVTDHSEGPAPKKRNAPLPPAPRPGAMRPEAAHAAPA 217

>FMT_PHOLL (Q7MYI1) Methionyl-tRNA formyltransferase (EC 2.1.2.9)|
          Length = 315

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +3

Query: 366 HGEVELRGGHEEVHGLRRPEQPHHAAQRLQPQPVRHL 476
           H E  L   HE V  L RP++P    ++L P PV+ L
Sbjct: 19  HLEALLMSQHEVVGVLTRPDKPAGRGKKLTPSPVKVL 55

>KINL_LEICH (P46865) Kinesin-like protein K39 (Fragment)|
          Length = 955

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +1

Query: 199 DGQSLSRHLALTRQNEGSSELARRRALCGAEQPRAR 306
           D + L+R L   +   G +ELAR  ALC A++  AR
Sbjct: 610 DRERLTRDLQRIQYEYGETELARDVALCAAQEMEAR 645

>LON_AZOBR (P77810) ATP-dependent protease La (EC 3.4.21.53)|
          Length = 810

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 19/71 (26%), Positives = 32/71 (45%)
 Frame = +1

Query: 190 QTEDGQSLSRHLALTRQNEGSSELARRRALCGAEQPRARAPLQAHSAVAAPSLCWPNLCT 369
           +TEDG+  S  L         S+ AR +AL   ++ R+ +P+ A + V    L W  + +
Sbjct: 248 ETEDGRDESAELEEKINKTRFSKEARDKALAELKKLRSMSPMSAEATVVRNYLDW--MLS 305

Query: 370 ARWSSAAATRK 402
             W      +K
Sbjct: 306 IPWKKRTKVKK 316

>ILVD2_BURS3 (Q39DS9) Dihydroxy-acid dehydratase 2 (EC 4.2.1.9) (DAD 2)|
          Length = 557

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = +1

Query: 190 QTEDGQSLSRHLALTRQNEGSSELARRRALCGAEQPR-ARAPLQAHSAVAAPS 345
           Q  D  ++  H  L + N   +ELARRRA      PR  R  L   +A+A P+
Sbjct: 498 QEGDSITIDAHRLLLQLNVDDAELARRRAAWQQPAPRYTRGVLAKFAALARPA 550

>COLX_ARATH (Q9C9F4) Putative zinc finger protein At1g68190|
          Length = 356

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -2

Query: 182 CAFCHSVKSVITCTKWASNLC-TYDAQAH 99
           C FC + ++V+ C    +NLC T DA+ H
Sbjct: 14  CEFCKAYRAVVYCIADTANLCLTCDAKVH 42


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,749,180
Number of Sequences: 219361
Number of extensions: 1007962
Number of successful extensions: 2885
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2884
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3581144924
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)