Clone Name | rbart34h04 |
---|---|
Clone Library Name | barley_pub |
>gb|AF332175.1|AF332175 Zea mays beta-expansin 2 (expB2) mRNA, partial cds Length = 907 Score = 99.6 bits (50), Expect = 8e-18 Identities = 71/78 (91%) Strand = Plus / Minus Query: 413 ctagctgtactggacgatggagcggtagaaggtgttgggcctccagttcttggggatgac 472 ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 528 ctagctgtactggacgaaggagcggtagaaggtgttgggcctccagttggccgggatgac 469 Query: 473 gttgcgggcgacgagcgt 490 ||| | |||||||||||| Sbjct: 468 gttcctggcgacgagcgt 451
>ref|NM_197701.1| Oryza sativa (japonica cultivar-group) beta-expansin EXPB4 (OSJNBa0010C11.2), mRNA Length = 1340 Score = 87.7 bits (44), Expect = 3e-14 Identities = 68/76 (89%) Strand = Plus / Minus Query: 415 agctgtactggacgatggagcggtagaaggtgttgggcctccagttcttggggatgacgt 474 ||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||| Sbjct: 966 agctgtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatgacgt 907 Query: 475 tgcgggcgacgagcgt 490 || |||||||||||| Sbjct: 906 tgttggcgacgagcgt 891
>gb|AF261272.1| Oryza sativa beta-expansin (EXPB4) mRNA, complete cds Length = 1249 Score = 87.7 bits (44), Expect = 3e-14 Identities = 68/76 (89%) Strand = Plus / Minus Query: 415 agctgtactggacgatggagcggtagaaggtgttgggcctccagttcttggggatgacgt 474 ||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||| Sbjct: 922 agctgtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatgacgt 863 Query: 475 tgcgggcgacgagcgt 490 || |||||||||||| Sbjct: 862 tgttggcgacgagcgt 847
>gb|AC069300.7| Oryza sativa chromosome 10 BAC OSJNBa0010C11 genomic sequence, complete sequence Length = 147117 Score = 87.7 bits (44), Expect = 3e-14 Identities = 68/76 (89%) Strand = Plus / Minus Query: 415 agctgtactggacgatggagcggtagaaggtgttgggcctccagttcttggggatgacgt 474 ||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||| Sbjct: 16768 agctgtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatgacgt 16709 Query: 475 tgcgggcgacgagcgt 490 || |||||||||||| Sbjct: 16708 tgttggcgacgagcgt 16693
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 87.7 bits (44), Expect = 3e-14 Identities = 68/76 (89%) Strand = Plus / Minus Query: 415 agctgtactggacgatggagcggtagaaggtgttgggcctccagttcttggggatgacgt 474 ||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||| Sbjct: 21341755 agctgtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatgacgt 21341696 Query: 475 tgcgggcgacgagcgt 490 || |||||||||||| Sbjct: 21341695 tgttggcgacgagcgt 21341680 Score = 63.9 bits (32), Expect = 5e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 411 atctagctgtactggacgatggagcggtagaaggtgttgggcctccagttcttggggatg 470 ||||||||| |||||||||||||||||||| || |||||| ||||||| |||||| Sbjct: 21311299 atctagctgaactggacgatggagcggtagttggagttgggggaccagttcgccgggatg 21311358 Query: 471 acgttgcgggcgacgagcgt 490 |||||| |||||||||||| Sbjct: 21311359 acgttgttggcgacgagcgt 21311378
>dbj|AK105981.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-F12, full insert sequence Length = 1290 Score = 87.7 bits (44), Expect = 3e-14 Identities = 68/76 (89%) Strand = Plus / Minus Query: 415 agctgtactggacgatggagcggtagaaggtgttgggcctccagttcttggggatgacgt 474 ||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||| Sbjct: 979 agctgtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatgacgt 920 Query: 475 tgcgggcgacgagcgt 490 || |||||||||||| Sbjct: 919 tgttggcgacgagcgt 904
>dbj|AK103929.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D11, full insert sequence Length = 1266 Score = 87.7 bits (44), Expect = 3e-14 Identities = 68/76 (89%) Strand = Plus / Minus Query: 415 agctgtactggacgatggagcggtagaaggtgttgggcctccagttcttggggatgacgt 474 ||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||| Sbjct: 972 agctgtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatgacgt 913 Query: 475 tgcgggcgacgagcgt 490 || |||||||||||| Sbjct: 912 tgttggcgacgagcgt 897
>dbj|AK101806.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033066K12, full insert sequence Length = 1883 Score = 87.7 bits (44), Expect = 3e-14 Identities = 68/76 (89%) Strand = Plus / Minus Query: 415 agctgtactggacgatggagcggtagaaggtgttgggcctccagttcttggggatgacgt 474 ||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||| Sbjct: 1556 agctgtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatgacgt 1497 Query: 475 tgcgggcgacgagcgt 490 || |||||||||||| Sbjct: 1496 tgttggcgacgagcgt 1481
>dbj|AK101357.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033035B15, full insert sequence Length = 1475 Score = 87.7 bits (44), Expect = 3e-14 Identities = 68/76 (89%) Strand = Plus / Minus Query: 415 agctgtactggacgatggagcggtagaaggtgttgggcctccagttcttggggatgacgt 474 ||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||| Sbjct: 1160 agctgtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatgacgt 1101 Query: 475 tgcgggcgacgagcgt 490 || |||||||||||| Sbjct: 1100 tgttggcgacgagcgt 1085
>dbj|AK060096.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-G02, full insert sequence Length = 1293 Score = 87.7 bits (44), Expect = 3e-14 Identities = 68/76 (89%) Strand = Plus / Minus Query: 415 agctgtactggacgatggagcggtagaaggtgttgggcctccagttcttggggatgacgt 474 ||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||| Sbjct: 978 agctgtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatgacgt 919 Query: 475 tgcgggcgacgagcgt 490 || |||||||||||| Sbjct: 918 tgttggcgacgagcgt 903
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 87.7 bits (44), Expect = 3e-14 Identities = 68/76 (89%) Strand = Plus / Minus Query: 415 agctgtactggacgatggagcggtagaaggtgttgggcctccagttcttggggatgacgt 474 ||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||| Sbjct: 21353018 agctgtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatgacgt 21352959 Query: 475 tgcgggcgacgagcgt 490 || |||||||||||| Sbjct: 21352958 tgttggcgacgagcgt 21352943 Score = 63.9 bits (32), Expect = 5e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 411 atctagctgtactggacgatggagcggtagaaggtgttgggcctccagttcttggggatg 470 ||||||||| |||||||||||||||||||| || |||||| ||||||| |||||| Sbjct: 21322563 atctagctgaactggacgatggagcggtagttggagttgggggaccagttcgccgggatg 21322622 Query: 471 acgttgcgggcgacgagcgt 490 |||||| |||||||||||| Sbjct: 21322623 acgttgttggcgacgagcgt 21322642
>gb|AY543537.1| Triticum aestivum expansin EXPB2 mRNA, complete cds Length = 948 Score = 87.7 bits (44), Expect = 3e-14 Identities = 68/76 (89%) Strand = Plus / Minus Query: 415 agctgtactggacgatggagcggtagaaggtgttgggcctccagttcttggggatgacgt 474 ||||||||||||||| |||||||||||||||||||||||||||||| |||||||| | Sbjct: 879 agctgtactggacgaaggagcggtagaaggtgttgggcctccagttggccgggatgacct 820 Query: 475 tgcgggcgacgagcgt 490 || |||||||||||| Sbjct: 819 tgttggcgacgagcgt 804
>gb|BT019137.1| Zea mays clone Contig781.F mRNA sequence Length = 1044 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Minus Query: 414 tagctgtactggacgatggagcggtagaaggtgttgggcctccagttcttggggatgacg 473 |||||||||||||||| ||||||||||||||||||||| | |||||| ||||||||| Sbjct: 565 tagctgtactggacgaaggagcggtagaaggtgttggggcgccagttggccgggatgacg 506 Query: 474 ttgcgggcgacgagcgt 490 ||| |||||||||||| Sbjct: 505 ttgttggcgacgagcgt 489
>gb|BT017478.1| Zea mays clone EL01N0408G02.c mRNA sequence Length = 832 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Minus Query: 414 tagctgtactggacgatggagcggtagaaggtgttgggcctccagttcttggggatgacg 473 |||||||||||||||| ||||||||||||||||||||| | |||||| ||||||||| Sbjct: 304 tagctgtactggacgaaggagcggtagaaggtgttggggcgccagttggccgggatgacg 245 Query: 474 ttgcgggcgacgagcgt 490 ||| |||||||||||| Sbjct: 244 ttgttggcgacgagcgt 228
>gb|AF332181.1|AF332181 Zea mays beta-expansin 8 (expB8) mRNA, complete cds Length = 1479 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Minus Query: 414 tagctgtactggacgatggagcggtagaaggtgttgggcctccagttcttggggatgacg 473 |||||||||||||||| ||||||||||||||||||||| | |||||| ||||||||| Sbjct: 940 tagctgtactggacgaaggagcggtagaaggtgttggggcgccagttggccgggatgacg 881 Query: 474 ttgcgggcgacgagcgt 490 ||| |||||||||||| Sbjct: 880 ttgttggcgacgagcgt 864
>gb|AY589579.1| Triticum aestivum beta-expansin TaEXPB2 mRNA, complete cds Length = 897 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 415 agctgtactggacgatggagcggtagaaggtgttgggc 452 |||||||||||||||||||||||||||||||| ||||| Sbjct: 830 agctgtactggacgatggagcggtagaaggtgctgggc 793
>gb|AY543536.1| Triticum aestivum expansin EXPB1 mRNA, complete cds Length = 810 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 415 agctgtactggacgatggagcggtagaaggtgttgggc 452 |||||||||||||||||||||||||||||||| ||||| Sbjct: 803 agctgtactggacgatggagcggtagaaggtgctgggc 766
>ref|NM_197698.1| Oryza sativa (japonica cultivar-group) beta-expansin EXPB6 (OSJNBb0014I11.3), mRNA Length = 1240 Score = 63.9 bits (32), Expect = 5e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 411 atctagctgtactggacgatggagcggtagaaggtgttgggcctccagttcttggggatg 470 ||||||||| |||||||||||||||||||| || |||||| ||||||| |||||| Sbjct: 926 atctagctgaactggacgatggagcggtagttggagttgggggaccagttcgccgggatg 867 Query: 471 acgttgcgggcgacgagcgt 490 |||||| |||||||||||| Sbjct: 866 acgttgttggcgacgagcgt 847
>gb|AF261274.1| Oryza sativa beta-expansin (EXPB6) mRNA, complete cds Length = 1250 Score = 63.9 bits (32), Expect = 5e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 411 atctagctgtactggacgatggagcggtagaaggtgttgggcctccagttcttggggatg 470 ||||||||| |||||||||||||||||||| || |||||| ||||||| |||||| Sbjct: 919 atctagctgaactggacgatggagcggtagttggagttgggggaccagttcgccgggatg 860 Query: 471 acgttgcgggcgacgagcgt 490 |||||| |||||||||||| Sbjct: 859 acgttgttggcgacgagcgt 840
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 419 gtactggacgatggagcggtagaaggtgttgggcctccagttcttggggatgacgt 474 ||||||||||| ||| |||||||||||||||||| ||||||| ||||||||||| Sbjct: 157666 gtactggacgaaggaacggtagaaggtgttgggcgtccagttgagggggatgacgt 157721 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Minus Query: 421 actggacgatggagcggtagaaggtgttgggc 452 ||||||||||||||| ||||| |||||||||| Sbjct: 169422 actggacgatggagctgtagacggtgttgggc 169391 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 aagacgaagacgaagaagacgacga 205 ||||||||||||||||||| ||||| Sbjct: 33179971 aagacgaagacgaagaagatgacga 33179995 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 ccaagacgaagacgaagaaga 199 ||||||||||||||||||||| Sbjct: 8183603 ccaagacgaagacgaagaaga 8183583 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 aattaattgattgattgatt 331 |||||||||||||||||||| Sbjct: 4215175 aattaattgattgattgatt 4215156
>gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAb0079B22, from chromosome 3, complete sequence Length = 156933 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 419 gtactggacgatggagcggtagaaggtgttgggcctccagttcttggggatgacgt 474 ||||||||||| ||| |||||||||||||||||| ||||||| ||||||||||| Sbjct: 91666 gtactggacgaaggaacggtagaaggtgttgggcgtccagttgagggggatgacgt 91721 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Minus Query: 421 actggacgatggagcggtagaaggtgttgggc 452 ||||||||||||||| ||||| |||||||||| Sbjct: 103422 actggacgatggagctgtagacggtgttgggc 103391
>gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 genomic sequence, complete sequence Length = 135510 Score = 63.9 bits (32), Expect = 5e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 411 atctagctgtactggacgatggagcggtagaaggtgttgggcctccagttcttggggatg 470 ||||||||| |||||||||||||||||||| || |||||| ||||||| |||||| Sbjct: 23060 atctagctgaactggacgatggagcggtagttggagttgggggaccagttcgccgggatg 23001 Query: 471 acgttgcgggcgacgagcgt 490 |||||| |||||||||||| Sbjct: 23000 acgttgttggcgacgagcgt 22981
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 419 gtactggacgatggagcggtagaaggtgttgggcctccagttcttggggatgacgt 474 ||||||||||| ||| |||||||||||||||||| ||||||| ||||||||||| Sbjct: 157666 gtactggacgaaggaacggtagaaggtgttgggcgtccagttgagggggatgacgt 157721 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Minus Query: 421 actggacgatggagcggtagaaggtgttgggc 452 ||||||||||||||| ||||| |||||||||| Sbjct: 169422 actggacgatggagctgtagacggtgttgggc 169391 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 aagacgaagacgaagaagacgacga 205 ||||||||||||||||||| ||||| Sbjct: 33270481 aagacgaagacgaagaagatgacga 33270505 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 ccaagacgaagacgaagaaga 199 ||||||||||||||||||||| Sbjct: 8181438 ccaagacgaagacgaagaaga 8181418 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 aattaattgattgattgatt 331 |||||||||||||||||||| Sbjct: 4215284 aattaattgattgattgatt 4215265
>gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence Length = 162241 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 419 gtactggacgatggagcggtagaaggtgttgggcctccagttcttggggatgacgt 474 ||||||||||| ||| |||||||||||||||||| ||||||| ||||||||||| Sbjct: 105000 gtactggacgaaggaacggtagaaggtgttgggcgtccagttgagggggatgacgt 104945 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Plus Query: 421 actggacgatggagcggtagaaggtgttgggc 452 ||||||||||||||| ||||| |||||||||| Sbjct: 93244 actggacgatggagctgtagacggtgttgggc 93275
>dbj|AK105799.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-A09, full insert sequence Length = 1257 Score = 63.9 bits (32), Expect = 5e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 411 atctagctgtactggacgatggagcggtagaaggtgttgggcctccagttcttggggatg 470 ||||||||| |||||||||||||||||||| || |||||| ||||||| |||||| Sbjct: 939 atctagctgaactggacgatggagcggtagttggagttgggggaccagttcgccgggatg 880 Query: 471 acgttgcgggcgacgagcgt 490 |||||| |||||||||||| Sbjct: 879 acgttgttggcgacgagcgt 860
>dbj|AK104197.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-A02, full insert sequence Length = 1257 Score = 63.9 bits (32), Expect = 5e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 411 atctagctgtactggacgatggagcggtagaaggtgttgggcctccagttcttggggatg 470 ||||||||| |||||||||||||||||||| || |||||| ||||||| |||||| Sbjct: 939 atctagctgaactggacgatggagcggtagttggagttgggggaccagttcgccgggatg 880 Query: 471 acgttgcgggcgacgagcgt 490 |||||| |||||||||||| Sbjct: 879 acgttgttggcgacgagcgt 860
>dbj|AK101728.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061F13, full insert sequence Length = 1263 Score = 63.9 bits (32), Expect = 5e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 411 atctagctgtactggacgatggagcggtagaaggtgttgggcctccagttcttggggatg 470 ||||||||| |||||||||||||||||||| || |||||| ||||||| |||||| Sbjct: 945 atctagctgaactggacgatggagcggtagttggagttgggggaccagttcgccgggatg 886 Query: 471 acgttgcgggcgacgagcgt 490 |||||| |||||||||||| Sbjct: 885 acgttgttggcgacgagcgt 866
>dbj|AK070972.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023069H18, full insert sequence Length = 1019 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 419 gtactggacgatggagcggtagaaggtgttgggcctccagttcttggggatgacgt 474 ||||||||||| ||| |||||||||||||||||| ||||||| ||||||||||| Sbjct: 889 gtactggacgaaggaacggtagaaggtgttgggcgtccagttgagggggatgacgt 834
>dbj|AK061498.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-D06, full insert sequence Length = 1259 Score = 63.9 bits (32), Expect = 5e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 411 atctagctgtactggacgatggagcggtagaaggtgttgggcctccagttcttggggatg 470 ||||||||| |||||||||||||||||||| || |||||| ||||||| |||||| Sbjct: 939 atctagctgaactggacgatggagcggtagttggagttgggggaccagttcgccgggatg 880 Query: 471 acgttgcgggcgacgagcgt 490 |||||| |||||||||||| Sbjct: 879 acgttgttggcgacgagcgt 860
>gb|AY112069.1| Zea mays CL35761_1 mRNA sequence Length = 631 Score = 63.9 bits (32), Expect = 5e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 419 gtactggacgatggagcggtagaaggtgttgggcctccagttcttggggatgacgttgcg 478 ||||||||||||||| | |||||| ||||| ||||||||||| |||||||||| ||| Sbjct: 100 gtactggacgatggatctgtagaatgtgtttggcctccagttgagtgggatgacgtcgcg 159 Query: 479 ggcgacgagcgt 490 ||||||||||| Sbjct: 160 tgcgacgagcgt 171
>gb|AY589580.1| Triticum aestivum beta-expansin TaEXPB3 mRNA, complete cds Length = 1013 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 415 agctgtactggacgatggagcggtagaaggtgttgggcctccagtt 460 ||||| ||||||||| |||||||||| |||||||||||||||||| Sbjct: 857 agctgaactggacgaaggagcggtagtcggtgttgggcctccagtt 812
>gb|AY543541.1| Triticum aestivum expansin EXPB7 mRNA, complete cds Length = 1056 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 415 agctgtactggacgatggagcggtagaaggtgttgggcctccagtt 460 ||||| ||||||||| |||||||||| |||||||||||||||||| Sbjct: 889 agctgaactggacgaaggagcggtagtcggtgttgggcctccagtt 844
>gb|AY543538.1| Triticum aestivum expansin EXPB3 mRNA, complete cds Length = 834 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 415 agctgtactggacgatggagcggtagaaggtgttgggc 452 ||||||||||||||||||| |||||||||||| ||||| Sbjct: 809 agctgtactggacgatggaacggtagaaggtgctgggc 772
>gb|AF261276.2| Oryza sativa beta-expansin (EXPB8) mRNA, partial cds Length = 933 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 419 gtactggacgatggagcggtagaaggtgttgggcctccagttcttggggatgacgt 474 ||||||||||| ||| ||||| |||||||||||| ||||||| ||||||||||| Sbjct: 807 gtactggacgaaggaacggtaaaaggtgttgggcgtccagttgagggggatgacgt 752
>emb|AJ295941.1|FPR295941 Festuca pratensis mRNA for beta expansin B2 (expB2 gene) Length = 1194 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 421 actggacgatggagcggtagaaggtgttgggcctccagtt 460 ||||||||| |||||||||| |||||||||||||||||| Sbjct: 884 actggacgaaggagcggtagtcggtgttgggcctccagtt 845
>gb|AC157931.11| Mus musculus chromosome 5, clone RP24-159I10, complete sequence Length = 147518 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 312 aattaattgattgattgattaaaact 337 |||||||||||||||||||||||||| Sbjct: 104727 aattaattgattgattgattaaaact 104752
>emb|CR377226.19| Zebrafish DNA sequence from clone DKEY-120I4 in linkage group 8, complete sequence Length = 173122 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Minus Query: 312 aattaattgattgattgattaaaa 335 |||||||||||||||||||||||| Sbjct: 22386 aattaattgattgattgattaaaa 22363
>gb|AC128862.4| Rattus norvegicus 4 BAC CH230-419L6 (Children's Hospital Oakland Research Institute) complete sequence Length = 184149 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Minus Query: 312 aattaattgattgattgattaaaa 335 |||||||||||||||||||||||| Sbjct: 170927 aattaattgattgattgattaaaa 170904
>gb|AC111321.8| Rattus norvegicus 4 BAC CH230-241A9 (Children's Hospital Oakland Research Institute) complete sequence Length = 227849 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Plus Query: 312 aattaattgattgattgattaaaa 335 |||||||||||||||||||||||| Sbjct: 154968 aattaattgattgattgattaaaa 154991
>gb|AC118673.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0080O10, from chromosome 3, complete sequence Length = 127917 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Minus Query: 421 actggacgatggagcggtagaaggtgttgggc 452 ||||||||||||||| ||||| |||||||||| Sbjct: 6489 actggacgatggagctgtagacggtgttgggc 6458
>gb|AC025726.2| Caenorhabditis elegans cosmid Y71G12B, complete sequence Length = 191954 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Minus Query: 179 ccaagacgaagacgaagaagacga 202 |||||||||||||||||||||||| Sbjct: 137050 ccaagacgaagacgaagaagacga 137027
>emb|BX296519.3| Zebrafish DNA sequence from clone CH211-278N7, complete sequence Length = 99968 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Minus Query: 312 aattaattgattgattgattaaaa 335 |||||||||||||||||||||||| Sbjct: 87151 aattaattgattgattgattaaaa 87128
>dbj|AK061423.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-G02, full insert sequence Length = 1027 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Minus Query: 421 actggacgatggagcggtagaaggtgttgggc 452 ||||||||||||||| ||||| |||||||||| Sbjct: 834 actggacgatggagctgtagacggtgttgggc 803
>ref|XM_467144.1| Oryza sativa (japonica cultivar-group), mRNA Length = 822 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 464 ggggatgacgttgcgggcgacgagcgt 490 |||||||||||||| |||||||||||| Sbjct: 762 ggggatgacgttgctggcgacgagcgt 736
>gb|AC130561.11| Rattus norvegicus BAC CH230-161F3 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 161423 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 311 aaattaattgattgattgattaa 333 ||||||||||||||||||||||| Sbjct: 46588 aaattaattgattgattgattaa 46610
>gb|AF391107.1| Oryza sativa beta-expansin OsEXPB14 (EXPB14) gene, partial cds Length = 1348 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 464 ggggatgacgttgcgggcgacgagcgt 490 |||||||||||||| |||||||||||| Sbjct: 422 ggggatgacgttgctggcgacgagcgt 396
>gb|AC084054.12| Mus Musculus Strain C57BL6/J chromosome 5 BAC, RP23-137N6, complete sequence Length = 231589 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 313 attaattgattgattgattaaaa 335 ||||||||||||||||||||||| Sbjct: 59800 attaattgattgattgattaaaa 59822
>gb|AC164570.3| Mus musculus BAC clone CH25-194I22 from chromosome 5, complete sequence Length = 103796 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 183 gacgaagacgaagaagacgacga 205 ||||||||||||||||||||||| Sbjct: 68509 gacgaagacgaagaagacgacga 68531 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 aagacgaagacgaagaagacgacga 205 |||||||||| |||||||||||||| Sbjct: 68471 aagacgaagaagaagaagacgacga 68495
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 464 ggggatgacgttgcgggcgacgagcgt 490 |||||||||||||| |||||||||||| Sbjct: 26658421 ggggatgacgttgctggcgacgagcgt 26658395 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 312 aattaattgattgattgatt 331 |||||||||||||||||||| Sbjct: 4350635 aattaattgattgattgatt 4350654
>gb|AF509328.1| Tetrahymena pigmentosa metallothionein MT-1 (MT-1) gene, complete cds Length = 1186 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 311 aaattaattgattgattgattaaaact 337 ||||||||| ||||||||||||||||| Sbjct: 923 aaattaattaattgattgattaaaact 949
>dbj|AP005072.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0708H12 Length = 162381 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 464 ggggatgacgttgcgggcgacgagcgt 490 |||||||||||||| |||||||||||| Sbjct: 20451 ggggatgacgttgctggcgacgagcgt 20425
>dbj|AP005289.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_F09 Length = 139371 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 464 ggggatgacgttgcgggcgacgagcgt 490 |||||||||||||| |||||||||||| Sbjct: 92582 ggggatgacgttgctggcgacgagcgt 92556
>gb|AC101703.11| Mus musculus chromosome 1, clone RP23-248B15, complete sequence Length = 208984 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 312 aattaattgattgattgattaaa 334 ||||||||||||||||||||||| Sbjct: 41333 aattaattgattgattgattaaa 41311
>emb|AM055942.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ia Length = 1923819 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 183 gacgaagacgaagaagacgacga 205 ||||||||||||||||||||||| Sbjct: 484935 gacgaagacgaagaagacgacga 484957
>emb|BX571899.9| Zebrafish DNA sequence from clone DKEY-256I3 in linkage group 22, complete sequence Length = 66445 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 311 aaattaattgattgattgattaa 333 ||||||||||||||||||||||| Sbjct: 54589 aaattaattgattgattgattaa 54567
>gb|AF479587.1| Tetrahymena sp. B7 metallothionein MT-1 gene, complete cds Length = 1111 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 311 aaattaattgattgattgattaaaact 337 ||||||||| ||||||||||||||||| Sbjct: 848 aaattaattaattgattgattaaaact 874
>emb|AL929312.4| Mouse DNA sequence from clone RP23-463G15 on chromosome 2, complete sequence Length = 165121 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 311 aaattaattgattgattgattaa 333 ||||||||||||||||||||||| Sbjct: 68521 aaattaattgattgattgattaa 68543
>emb|AJ005080.1|TPAJ5080 Tetrahymena pyriformis gene encoding cadmium-induced metallothionein Length = 1230 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 311 aaattaattgattgattgattaaaact 337 ||||||||| ||||||||||||||||| Sbjct: 923 aaattaattaattgattgattaaaact 949
>ref|NM_117871.3| Arabidopsis thaliana unknown protein AT4G17620 transcript variant AT4G17620.1 mRNA, complete cds Length = 1873 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 181 aagacgaagacgaagaagacga 202 |||||||||||||||||||||| Sbjct: 239 aagacgaagacgaagaagacga 218
>ref|NM_001036577.1| Arabidopsis thaliana unknown protein AT4G17620 transcript variant AT4G17620.2 mRNA, complete cds Length = 1873 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 181 aagacgaagacgaagaagacga 202 |||||||||||||||||||||| Sbjct: 239 aagacgaagacgaagaagacga 218
>gb|AC166487.6| Mus musculus chromosome 1, clone RP23-298A7, complete sequence Length = 187404 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 312 aattaattgattgattgattaa 333 |||||||||||||||||||||| Sbjct: 153406 aattaattgattgattgattaa 153427
>ref|XM_550471.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2113 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 aagacgaagacgaagaagacgacgac 206 |||||||||||||||| ||||||||| Sbjct: 80 aagacgaagacgaagacgacgacgac 105
>ref|XM_473433.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 795 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 465 gggatgacgttgcgggcgacgagcgt 490 ||||||||||||| |||||||||||| Sbjct: 746 gggatgacgttgctggcgacgagcgt 721
>gb|AC119290.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0037H06, complete sequence Length = 144457 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 465 gggatgacgttgcgggcgacgagcgt 490 ||||||||||||| |||||||||||| Sbjct: 102845 gggatgacgttgctggcgacgagcgt 102870
>gb|AF053356.1| Homo sapiens chromosome 7q22 sequence, complete sequence Length = 227968 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 312 aattaattgattgattgattaa 333 |||||||||||||||||||||| Sbjct: 111365 aattaattgattgattgattaa 111344
>gb|AC154871.13| Mus musculus chromosome 1, clone RP23-354B17, complete sequence Length = 211644 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 312 aattaattgattgattgattaa 333 |||||||||||||||||||||| Sbjct: 77887 aattaattgattgattgattaa 77908
>gb|AC124993.19| Mus musculus chromosome 15, clone RP23-150J21, complete sequence Length = 214304 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 312 aattaattgattgattgattaa 333 |||||||||||||||||||||| Sbjct: 193061 aattaattgattgattgattaa 193040
>gb|AF391108.1| Oryza sativa beta-expansin OsEXPB15 (EXPB15) gene, complete cds Length = 4080 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 465 gggatgacgttgcgggcgacgagcgt 490 ||||||||||||| |||||||||||| Sbjct: 3142 gggatgacgttgctggcgacgagcgt 3117
>gb|AC132140.3| Mus musculus BAC clone RP23-82C19 from chromosome 19, complete sequence Length = 278583 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 312 aattaattgattgattgattaa 333 |||||||||||||||||||||| Sbjct: 171472 aattaattgattgattgattaa 171493
>ref|XM_453330.1| Kluyveromyces lactis NRRL Y-1140, KLLA0D06017g predicted mRNA Length = 1779 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 181 aagacgaagacgaagaagacga 202 |||||||||||||||||||||| Sbjct: 1235 aagacgaagacgaagaagacga 1256
>gb|AF261275.1| Oryza sativa beta-expansin (EXPB7) mRNA, complete cds Length = 1210 Score = 44.1 bits (22), Expect = 0.42 Identities = 29/32 (90%) Strand = Plus / Minus Query: 421 actggacgatggagcggtagaaggtgttgggc 452 ||||||||||||||| ||| | |||||||||| Sbjct: 1026 actggacgatggagctgtaracggtgttgggc 995
>gb|AC133191.3| Mus musculus chromosome 18 clone RP23-390K15, complete sequence Length = 212060 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 312 aattaattgattgattgattaa 333 |||||||||||||||||||||| Sbjct: 156957 aattaattgattgattgattaa 156936
>gb|AC111085.11| Mus musculus chromosome 9, clone RP23-146C24, complete sequence Length = 220622 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 312 aattaattgattgattgattaa 333 |||||||||||||||||||||| Sbjct: 207338 aattaattgattgattgattaa 207359
>gb|DQ483705.1| Gymnogyps californianus clone 128F microsatellite sequence Length = 437 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 181 aagacgaagacgaagaagacga 202 |||||||||||||||||||||| Sbjct: 216 aagacgaagacgaagaagacga 237
>ref|XM_752296.1| Ustilago maydis 521 hypothetical protein (UM01242.1) partial mRNA Length = 2118 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 181 aagacgaagacgaagaagacga 202 |||||||||||||||||||||| Sbjct: 986 aagacgaagacgaagaagacga 1007
>emb|AJ295942.1|FPR295942 Festuca pratensis mRNA for beta expansin B3 (expB3 gene) Length = 1219 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 415 agctgtactggacgatggagcggtag 440 ||||| |||||||||||||||||||| Sbjct: 904 agctgaactggacgatggagcggtag 879
>gb|AC125174.3| Mus musculus BAC clone RP24-544G11 from chromosome 16, complete sequence Length = 196646 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 181 aagacgaagacgaagaagacgacgac 206 ||||||||||||| |||||||||||| Sbjct: 168651 aagacgaagacgacgaagacgacgac 168626
>gb|AC129319.4| Mus musculus BAC clone RP24-127J16 from chromosome 8, complete sequence Length = 169835 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 181 aagacgaagacgaagaagacgacgac 206 |||| ||||||||||||||||||||| Sbjct: 11159 aagaagaagacgaagaagacgacgac 11134
>gb|AC122817.3| Mus musculus BAC clone RP23-241M6 from 16, complete sequence Length = 185702 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 aagacgaagacgaagaagacgacgac 206 ||||||||||||| |||||||||||| Sbjct: 182212 aagacgaagacgacgaagacgacgac 182237
>gb|AC116582.3| Mus musculus BAC clone RP23-340C13 from 9, complete sequence Length = 214625 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 312 aattaattgattgattgattaa 333 |||||||||||||||||||||| Sbjct: 176728 aattaattgattgattgattaa 176707
>gb|AC098732.3| Mus musculus BAC clone RP23-3L20 from 3, complete sequence Length = 274210 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 181 aagacgaagacgaagaagacgacgac 206 |||||||||| ||||||||||||||| Sbjct: 73714 aagacgaagaagaagaagacgacgac 73689
>ref|XM_723171.1| Plasmodium yoelii yoelii str. 17XNL retinitis pigmentosa GTPase regulator protein (PY01014) partial mRNA Length = 2025 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 aagacgaagacgaagaagacgacgac 206 |||||||||||||||| ||||||||| Sbjct: 443 aagacgaagacgaagatgacgacgac 468
>gb|AC113528.8| Mus musculus chromosome 18, clone RP23-419F17, complete sequence Length = 217309 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 312 aattaattgattgattgattaa 333 |||||||||||||||||||||| Sbjct: 206217 aattaattgattgattgattaa 206196
>gb|AC102510.5| Mus musculus chromosome 5, clone RP24-346C14, complete sequence Length = 180051 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 aagacgaagacgaagaagacgacgac 206 |||||||||||||||| ||||||||| Sbjct: 5134 aagacgaagacgaagacgacgacgac 5159
>gb|AC162282.6| Mus musculus chromosome 8, clone RP23-154H18, complete sequence Length = 217566 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 aagacgaagacgaagaagacgacgac 206 |||| ||||||||||||||||||||| Sbjct: 25816 aagaagaagacgaagaagacgacgac 25841
>emb|AL844222.19| Mouse DNA sequence from clone RP23-44P13 on chromosome 4, complete sequence Length = 238429 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 312 aattaattgattgattgattaa 333 |||||||||||||||||||||| Sbjct: 233376 aattaattgattgattgattaa 233397
>emb|AL109941.17|HSJ435K13 Human DNA sequence from clone RP3-435K13 on chromosome 6q14.1-16.1 Contains a novel pseudogene, complete sequence Length = 151301 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 313 attaattgattgattgattaaa 334 |||||||||||||||||||||| Sbjct: 58210 attaattgattgattgattaaa 58189
>emb|Z97343.1|ATFCA8 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 8 Length = 207674 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 181 aagacgaagacgaagaagacga 202 |||||||||||||||||||||| Sbjct: 186924 aagacgaagacgaagaagacga 186903
>gb|AY133815.1| Arabidopsis thaliana clone U18774 unknown protein (At4g17620) mRNA, complete cds Length = 1666 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 181 aagacgaagacgaagaagacga 202 |||||||||||||||||||||| Sbjct: 148 aagacgaagacgaagaagacga 127
>gb|AY074548.1| Arabidopsis thaliana unknown protein (At4g17620) mRNA, complete cds Length = 1782 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 181 aagacgaagacgaagaagacga 202 |||||||||||||||||||||| Sbjct: 184 aagacgaagacgaagaagacga 163
>emb|CR382124.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1715506 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 181 aagacgaagacgaagaagacga 202 |||||||||||||||||||||| Sbjct: 517272 aagacgaagacgaagaagacga 517293
>emb|AL606633.3|OSJN00060 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0010H02, complete sequence Length = 173522 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 465 gggatgacgttgcgggcgacgagcgt 490 ||||||||||||| |||||||||||| Sbjct: 51045 gggatgacgttgctggcgacgagcgt 51020
>emb|AL161546.2|ATCHRIV46 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 46 Length = 198788 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 181 aagacgaagacgaagaagacga 202 |||||||||||||||||||||| Sbjct: 176289 aagacgaagacgaagaagacga 176268
>emb|AL161494.2|ATCHRIV6 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 6 Length = 194892 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 181 aagacgaagacgaagaagacgacgac 206 |||||||||||||||| ||||||||| Sbjct: 11990 aagacgaagacgaagacgacgacgac 11965
>emb|BX928755.10| Zebrafish DNA sequence from clone DKEY-199C16 in linkage group 21, complete sequence Length = 174423 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 313 attaattgattgattgattaaa 334 |||||||||||||||||||||| Sbjct: 21742 attaattgattgattgattaaa 21763
>emb|BX537344.8| Zebrafish DNA sequence from clone RP71-34B6 in linkage group 2, complete sequence Length = 174019 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 312 aattaattgattgattgattaa 333 |||||||||||||||||||||| Sbjct: 56627 aattaattgattgattgattaa 56606
>gb|AC004680.3| Arabidopsis thaliana chromosome 2 clone F23F1 map m283, complete sequence Length = 88543 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 181 aagacgaagacgaagaagacga 202 |||||||||||||||||||||| Sbjct: 45237 aagacgaagacgaagaagacga 45258
>gb|AC009488.5| Homo sapiens BAC clone RP11-336D7 from 7, complete sequence Length = 98876 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 312 aattaattgattgattgattaa 333 |||||||||||||||||||||| Sbjct: 5124 aattaattgattgattgattaa 5145
>gb|AC102528.20| Mus musculus chromosome 5, clone RP23-30D20, complete sequence Length = 241925 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 aagacgaagacgaagaagacgacgac 206 |||||||||||||||| ||||||||| Sbjct: 220196 aagacgaagacgaagacgacgacgac 220221
>gb|AF332178.1|AF332178 Zea mays beta-expansin 5 (expB5) mRNA, partial cds Length = 650 Score = 44.1 bits (22), Expect = 0.42 Identities = 31/34 (91%) Strand = Plus / Minus Query: 419 gtactggacgatggagcggtagaaggtgttgggc 452 |||||| | ||||||||||||| ||||||||||| Sbjct: 529 gtactgaatgatggagcggtagtaggtgttgggc 496
>gb|AC102625.8| Mus musculus chromosome 8, clone RP23-453E3, complete sequence Length = 167288 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 181 aagacgaagacgaagaagacgacgac 206 |||| ||||||||||||||||||||| Sbjct: 96683 aagaagaagacgaagaagacgacgac 96658
>gb|AF317727.1|AF317727 Mus musculus killer cell lectin-like receptor G1 (Klrg1) gene, complete cds Length = 13297 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 181 aagacgaagacgaagaagacga 202 |||||||||||||||||||||| Sbjct: 11174 aagacgaagacgaagaagacga 11153
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 465 gggatgacgttgcgggcgacgagcgt 490 ||||||||||||| |||||||||||| Sbjct: 27620416 gggatgacgttgctggcgacgagcgt 27620391
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 312 aattaattgattgattgattaa 333 |||||||||||||||||||||| Sbjct: 243944 aattaattgattgattgattaa 243923
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 178 accaagacgaagacgaagaaga 199 |||||||||||||||||||||| Sbjct: 26209629 accaagacgaagacgaagaaga 26209608 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 aagacgaagacgaagaagacgacgac 206 |||||||||||||||| ||||||||| Sbjct: 522137 aagacgaagacgaagacgacgacgac 522162 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 312 aattaattgattgattgatta 332 ||||||||||||||||||||| Sbjct: 2380381 aattaattgattgattgatta 2380361
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 465 gggatgacgttgcgggcgacgagcgt 490 ||||||||||||| |||||||||||| Sbjct: 8770403 gggatgacgttgctggcgacgagcgt 8770428
>gb|AC154613.3| Mus musculus BAC clone RP23-338M12 from chromosome 13, complete sequence Length = 200093 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 aagacgaagacgaagaagacgacgac 206 ||||||||||||||| |||||||||| Sbjct: 101159 aagacgaagacgaaggagacgacgac 101184
>gb|AC037424.10|AC037424 Arabidopsis thaliana chromosome 1 BAC F19K6 genomic sequence, complete sequence Length = 75948 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 181 aagacgaagacgaagaagacga 202 |||||||||||||||||||||| Sbjct: 60634 aagacgaagacgaagaagacga 60613
>emb|AL935065.7| Zebrafish DNA sequence from clone CH211-69I14 in linkage group 5, complete sequence Length = 167740 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 312 aattaattgattgattgattaa 333 |||||||||||||||||||||| Sbjct: 79428 aattaattgattgattgattaa 79449
>gb|AF075597.1|T2H3 Arabidopsis thaliana BAC T2H3 Length = 48689 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 aagacgaagacgaagaagacgacgac 206 |||||||||||||||| ||||||||| Sbjct: 40288 aagacgaagacgaagacgacgacgac 40313
>dbj|AP000616.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0514G12 Length = 138929 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 aagacgaagacgaagaagacgacgac 206 |||||||||||||||| ||||||||| Sbjct: 67645 aagacgaagacgaagacgacgacgac 67670
>dbj|AP005453.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0453H04 Length = 175047 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 178 accaagacgaagacgaagaaga 199 |||||||||||||||||||||| Sbjct: 74169 accaagacgaagacgaagaaga 74148
>gb|AY603595.1| Culicoides sonorensis clone Cssg00331 D7-related protein mRNA, complete cds Length = 530 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 312 aattaattgattgattgattaa 333 |||||||||||||||||||||| Sbjct: 476 aattaattgattgattgattaa 497
>emb|AL928824.13| Zebrafish DNA sequence from clone CH211-105D18 in linkage group 6, complete sequence Length = 189742 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 312 aattaattgattgattgattaa 333 |||||||||||||||||||||| Sbjct: 161773 aattaattgattgattgattaa 161752
>dbj|AP003909.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1300_E01 Length = 103022 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 312 aattaattgattgattgattaa 333 |||||||||||||||||||||| Sbjct: 10370 aattaattgattgattgattaa 10349
>dbj|AK111490.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000A19, full insert sequence Length = 4823 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 aagacgaagacgaagaagacgacgac 206 |||||||||||||||| ||||||||| Sbjct: 85 aagacgaagacgaagacgacgacgac 110
>dbj|AK101313.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034A12, full insert sequence Length = 1250 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 465 gggatgacgttgcgggcgacgagcgt 490 ||||||||||||| |||||||||||| Sbjct: 845 gggatgacgttgctggcgacgagcgt 820
>dbj|AK101029.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150H24, full insert sequence Length = 2112 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 aagacgaagacgaagaagacgacgac 206 |||||||||||||||| ||||||||| Sbjct: 79 aagacgaagacgaagacgacgacgac 104
>emb|CR847569.14| Zebrafish DNA sequence from clone CH211-195I21 in linkage group 22, complete sequence Length = 120175 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 312 aattaattgattgattgattaa 333 |||||||||||||||||||||| Sbjct: 6343 aattaattgattgattgattaa 6322
>emb|BX510342.7| Zebrafish DNA sequence from clone DKEY-15I15 in linkage group 2, complete sequence Length = 186711 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 312 aattaattgattgattgattaa 333 |||||||||||||||||||||| Sbjct: 57838 aattaattgattgattgattaa 57817
>emb|CR854915.21| Zebrafish DNA sequence from clone DKEY-4G13 in linkage group 13, complete sequence Length = 158798 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 312 aattaattgattgattgattaa 333 |||||||||||||||||||||| Sbjct: 15265 aattaattgattgattgattaa 15244
>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica Length = 2303261 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 311 aaattaattgattgattgatta 332 |||||||||||||||||||||| Sbjct: 381141 aaattaattgattgattgatta 381120
>gb|AF001308.1|ATAF001308 Arabidopsis thaliana BAC T10M13 from chromosome IV, from 10.8 cM to 11.6 cM, complete sequence Length = 105654 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 181 aagacgaagacgaagaagacgacgac 206 |||||||||||||||| ||||||||| Sbjct: 102605 aagacgaagacgaagacgacgacgac 102580
>gb|AC172750.1| Mus musculus BAC clone RP24-177J9 from chromosome 7, complete sequence Length = 145766 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 181 aagacgaagacgaagaagacga 202 |||||||||||||||||||||| Sbjct: 103666 aagacgaagacgaagaagacga 103687 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 181 aagacgaagacgaagaagacga 202 |||||||||||||||||||||| Sbjct: 103642 aagacgaagacgaagaagacga 103663
>emb|AL844211.6| Mouse DNA sequence from clone RP23-394O8 on chromosome 4, complete sequence Length = 18325 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 312 aattaattgattgattgattaa 333 |||||||||||||||||||||| Sbjct: 18127 aattaattgattgattgattaa 18106
>emb|AL683876.5| Mouse DNA sequence from clone RP23-100E6 on chromosome 2, complete sequence Length = 207486 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 312 aattaattgattgattgattaa 333 |||||||||||||||||||||| Sbjct: 174449 aattaattgattgattgattaa 174470
>emb|AL805910.7| Mouse DNA sequence from clone RP23-144K17 on chromosome 4, complete sequence Length = 200933 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 312 aattaattgattgattgattaa 333 |||||||||||||||||||||| Sbjct: 122031 aattaattgattgattgattaa 122010
>gb|AC167813.4| Mus musculus BAC clone RP24-233L18 from chromosome 7, complete sequence Length = 172485 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 181 aagacgaagacgaagaagacga 202 |||||||||||||||||||||| Sbjct: 42865 aagacgaagacgaagaagacga 42886 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 181 aagacgaagacgaagaagacga 202 |||||||||||||||||||||| Sbjct: 42841 aagacgaagacgaagaagacga 42862
>dbj|AB020860.1| Homo sapiens genomic DNA of 8p21.3-p22 anti-oncogene of hepatocellular colorectal and non-small cell lung cancer , segment 3/11 Length = 100000 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 181 aagacgaagacgaagaagacga 202 |||||||||||||||||||||| Sbjct: 13798 aagacgaagacgaagaagacga 13777
>emb|AL807817.7| Mouse DNA sequence from clone RP23-209B15 on chromosome 4, complete sequence Length = 101563 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 312 aattaattgattgattgattaa 333 |||||||||||||||||||||| Sbjct: 1802 aattaattgattgattgattaa 1781
>dbj|AP004782.3| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-103B16, complete sequence Length = 119191 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 aagacgaagacgaagaagacgacgac 206 ||||||| |||||||||||||||||| Sbjct: 102665 aagacgacgacgaagaagacgacgac 102690 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 183 gacgaagacgaagaagacgacgac 206 |||||||| ||||||||||||||| Sbjct: 102748 gacgaagaagaagaagacgacgac 102771 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 183 gacgaagacgaagaagacgacgac 206 ||||| |||||||||||||||||| Sbjct: 102706 gacgacgacgaagaagacgacgac 102729 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 183 gacgaagacgaagaagacgacgac 206 ||||| |||||||||||||||||| Sbjct: 102688 gacgacgacgaagaagacgacgac 102711
>gb|AC151760.1| Ornithorhynchus anatinus chromosome UNK clone OABb-456A1, complete sequence Length = 142934 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 attaattgattgattgattaa 333 ||||||||||||||||||||| Sbjct: 8350 attaattgattgattgattaa 8370
>ref|XM_469982.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1800 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 aagacgaagacgaagaagacgacga 205 ||||||||||||||||||| ||||| Sbjct: 1580 aagacgaagacgaagaagatgacga 1604
>ref|XM_477211.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2359 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 401 tggccatcttatctagctgta 421 ||||||||||||||||||||| Sbjct: 415 tggccatcttatctagctgta 395
>gb|AF442376.1| Pinus taeda clone PtTX4186 microsatellite sequence Length = 147 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 182 agacgaagacgaagaagacgacgac 206 ||||||||||||||| ||||||||| Sbjct: 62 agacgaagacgaagacgacgacgac 86
>gb|AC119671.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0084F23, complete sequence Length = 89829 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 aagacgaagacgaagaagacg 201 ||||||||||||||||||||| Sbjct: 43510 aagacgaagacgaagaagacg 43530
>gb|AC110895.14| Mus musculus chromosome 1, clone RP24-159G18, complete sequence Length = 186137 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 311 aaattaattgattgattgatt 331 ||||||||||||||||||||| Sbjct: 27008 aaattaattgattgattgatt 27028
>gb|AC115933.7| Mus musculus chromosome 3, clone RP24-539I8, complete sequence Length = 187920 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 311 aaattaattgattgattgatt 331 ||||||||||||||||||||| Sbjct: 90044 aaattaattgattgattgatt 90064
>gb|AC128859.4| Rattus norvegicus 10 BAC CH230-436I22 (Children's Hospital Oakland Research Institute) complete sequence Length = 156078 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 312 aattaattgattgattgatta 332 ||||||||||||||||||||| Sbjct: 28391 aattaattgattgattgatta 28371
>gb|AC117994.12| Mus musculus chromosome 6, clone RP23-25K2, complete sequence Length = 237945 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 attaattgattgattgattaa 333 ||||||||||||||||||||| Sbjct: 225112 attaattgattgattgattaa 225132
>gb|AC116798.11| Mus musculus chromosome 1, clone RP24-329K22, complete sequence Length = 173479 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 312 aattaattgattgattgatta 332 ||||||||||||||||||||| Sbjct: 18530 aattaattgattgattgatta 18510
>gb|AY057390.1| Serratia plymuthica RNA polymerase sigma-70 subunit (rpoD) gene, complete cds Length = 2367 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 186 gaagacgaagaagacgacgac 206 ||||||||||||||||||||| Sbjct: 964 gaagacgaagaagacgacgac 984
>gb|AC138109.3| Mus musculus BAC clone RP24-444I15 from chromosome 1, complete sequence Length = 209820 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 312 aattaattgattgattgatta 332 ||||||||||||||||||||| Sbjct: 169375 aattaattgattgattgatta 169355
>gb|AC147234.3| Mus musculus BAC clone RP24-500F11 from chromosome 18, complete sequence Length = 189846 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 315 taattgattgattgattaaaa 335 ||||||||||||||||||||| Sbjct: 56665 taattgattgattgattaaaa 56645
>gb|AC146602.3| Mus musculus BAC clone RP23-309L12 from chromosome 14, complete sequence Length = 198097 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 311 aaattaattgattgattgattaaaa 335 ||||||||| ||||||||||||||| Sbjct: 113816 aaattaattaattgattgattaaaa 113792
>gb|AC104241.7| Homo sapiens chromosome 11, clone RP11-45A12, complete sequence Length = 147821 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 311 aaattaattgattgattgatt 331 ||||||||||||||||||||| Sbjct: 22164 aaattaattgattgattgatt 22184
>ref|XM_756935.1| Ustilago maydis 521 hypothetical protein (UM05881.1) partial mRNA Length = 564 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 aagacgaagacgaagaagacgacga 205 ||||||||||||||||||| ||||| Sbjct: 266 aagacgaagacgaagaagaagacga 290
>emb|BX936442.10| Zebrafish DNA sequence from clone DKEY-101D4 in linkage group 21, complete sequence Length = 229721 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 311 aaattaattgattgattgatt 331 ||||||||||||||||||||| Sbjct: 69700 aaattaattgattgattgatt 69680
>gb|AC122211.4| Mus musculus BAC clone RP23-97F18 from chromosome 18, complete sequence Length = 186451 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 315 taattgattgattgattaaaa 335 ||||||||||||||||||||| Sbjct: 60792 taattgattgattgattaaaa 60812
>ref|XM_806144.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053503733.30) partial mRNA Length = 1599 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 186 gaagacgaagaagacgacgac 206 ||||||||||||||||||||| Sbjct: 110 gaagacgaagaagacgacgac 90
>gb|AC126555.3| Mus musculus BAC clone RP23-474A17 from chromosome 13, complete sequence Length = 187704 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 311 aaattaattgattgattgatt 331 ||||||||||||||||||||| Sbjct: 10918 aaattaattgattgattgatt 10938
>gb|AC124183.4| Mus musculus BAC clone RP23-213I18 from 13, complete sequence Length = 215251 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 311 aaattaattgattgattgatt 331 ||||||||||||||||||||| Sbjct: 49901 aaattaattgattgattgatt 49881
>gb|AC125056.3| Mus musculus BAC clone RP23-398G2 from chromosome 14, complete sequence Length = 204350 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 311 aaattaattgattgattgattaaaa 335 ||||||||| ||||||||||||||| Sbjct: 22874 aaattaattaattgattgattaaaa 22850
>gb|AC125206.3| Mus musculus BAC clone RP23-240G3 from 10, complete sequence Length = 184252 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 attaattgattgattgattaa 333 ||||||||||||||||||||| Sbjct: 157004 attaattgattgattgattaa 157024
>emb|CR751544.12| Zebrafish DNA sequence from clone DKEYP-21D8 in linkage group 8, complete sequence Length = 72504 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 attaattgattgattgattaa 333 ||||||||||||||||||||| Sbjct: 34570 attaattgattgattgattaa 34590
>emb|BX927285.6| Zebrafish DNA sequence from clone CH211-65M8, complete sequence Length = 188393 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 313 attaattgattgattgattaa 333 ||||||||||||||||||||| Sbjct: 106967 attaattgattgattgattaa 106947
>emb|AL672294.10| Human DNA sequence from clone XX-53 on chromosome 1 Contains the 3' end of a novel gene and a CpG island, complete sequence Length = 37457 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 314 ttaattgattgattgattaaa 334 ||||||||||||||||||||| Sbjct: 32977 ttaattgattgattgattaaa 32997
>emb|AL359757.21| Human DNA sequence from clone RP11-165I9 on chromosome 13q12.11-12.3 Contains the PABPC3 gene for poly(A) binding protein, cytoplasmic 3, the gene for a novel protein (FLJ30487), a pseudogene similar to part of 60S ribosomal protein L23a (RPL23A), 4 novel genes and 4 CpG islands, complete sequence Length = 187066 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 313 attaattgattgattgattaa 333 ||||||||||||||||||||| Sbjct: 177239 attaattgattgattgattaa 177219
>emb|AL132825.35|HSDJ756N5 Human DNA sequence from clone RP4-756N5 on chromosome 20q11.21-12 Contains the MYH7B gene for myosin heavy polypeptide 7B (cardiac muscle) beta, the C20orf188 gene for a novel protein similar to Trp4-associated protein TAP1 (ABCB2) and two CpG islands, complete sequence Length = 123782 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 aagacgaagacgaagaagacgacga 205 |||| |||||||||||||||||||| Sbjct: 80193 aagaagaagacgaagaagacgacga 80217 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 aagacgaagacgaagaagac 200 |||||||||||||||||||| Sbjct: 80347 aagacgaagacgaagaagac 80366
>gb|AC118772.5| Rattus norvegicus 10 BAC CH230-404C20 (Children's Hospital Oakland Research Institute) complete sequence Length = 178272 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 312 aattaattgattgattgatta 332 ||||||||||||||||||||| Sbjct: 145263 aattaattgattgattgatta 145243
>gb|AC158773.6| Mus musculus chromosome 1, clone RP23-324F10, complete sequence Length = 230988 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 311 aaattaattgattgattgatt 331 ||||||||||||||||||||| Sbjct: 69542 aaattaattgattgattgatt 69522
>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29 Length = 295150 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 462 ttggggatgacgttgcgggcg 482 ||||||||||||||||||||| Sbjct: 165443 ttggggatgacgttgcgggcg 165423
>emb|BX470105.10| Zebrafish DNA sequence from clone CH211-252D21 in linkage group 8, complete sequence Length = 155300 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 317 attgattgattgattaaaact 337 ||||||||||||||||||||| Sbjct: 50537 attgattgattgattaaaact 50557
>emb|AL645598.14| Mouse DNA sequence from clone RP23-259J23 on chromosome 11 Contains a ribosomal protein S17 (Rps17) pseudogene, complete sequence Length = 141141 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 32 gatgatgcatgattcacagat 52 ||||||||||||||||||||| Sbjct: 31215 gatgatgcatgattcacagat 31235
>emb|BX511225.7| Zebrafish DNA sequence from clone DKEY-28J24 in linkage group 21, complete sequence Length = 256675 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 317 attgattgattgattaaaact 337 ||||||||||||||||||||| Sbjct: 237219 attgattgattgattaaaact 237239
>emb|AL844600.3| Mouse DNA sequence from clone RP24-92D2 on chromosome 4, complete sequence Length = 149318 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 311 aaattaattgattgattgatt 331 ||||||||||||||||||||| Sbjct: 80585 aaattaattgattgattgatt 80605
>gb|AC093462.11| Homo sapiens chromosome 18, clone RP11-850A17, complete sequence Length = 203485 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 317 attgattgattgattaaaact 337 ||||||||||||||||||||| Sbjct: 177488 attgattgattgattaaaact 177508
>emb|CR392340.11| Zebrafish DNA sequence from clone DKEY-23G12 in linkage group 20, complete sequence Length = 247887 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 178 accaagacgaagacgaagaagacga 202 ||||||| ||||||||||||||||| Sbjct: 10503 accaagaagaagacgaagaagacga 10479
>gb|DQ229145.1| Phycomyces blakesleeanus MAP kinase and white collar one A (wcoA) genes, complete cds Length = 8564 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 attaattgattgattgattaa 333 ||||||||||||||||||||| Sbjct: 730 attaattgattgattgattaa 750
>gb|AC105299.44| Mus musculus strain C57BL/6J clone rp23-27h12 map 17, complete sequence Length = 221749 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 181 aagacgaagacgaagaagacgacga 205 ||||||||||||| ||||||||||| Sbjct: 13227 aagacgaagacgacgaagacgacga 13203
>gb|AC090666.6| Homo sapiens chromosome 18, clone RP11-116K4, complete sequence Length = 185255 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 317 attgattgattgattaaaact 337 ||||||||||||||||||||| Sbjct: 591 attgattgattgattaaaact 611
>gb|AC175205.2| Sporobolomyces roseus clone JGIBAIF-5L1, complete sequence Length = 36144 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 aagacgaagacgaagaagacgacga 205 ||||||||||||| ||||||||||| Sbjct: 33424 aagacgaagacgaggaagacgacga 33448
>emb|BX510333.14| Zebrafish DNA sequence from clone DKEYP-82D1 in linkage group 2, complete sequence Length = 198845 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 attaattgattgattgattaa 333 ||||||||||||||||||||| Sbjct: 154373 attaattgattgattgattaa 154393
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence Length = 1519138 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 aagacgaagacgaagaagacgacga 205 ||||||||||||||||||| ||||| Sbjct: 6620 aagacgaagacgaagaagaagacga 6644
>gb|AC159809.2| Mus musculus BAC clone RP24-216P6 from chromosome 9, complete sequence Length = 160712 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 attaattgattgattgattaa 333 ||||||||||||||||||||| Sbjct: 84184 attaattgattgattgattaa 84204
>gb|AF332180.1|AF332180 Zea mays beta-expansin 7 (expB7) mRNA, complete cds Length = 1173 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 420 tactggacgatggagcggtagaaggtgttgggc 452 ||||||||||| || |||||| ||||||||||| Sbjct: 867 tactggacgatagaacggtagtaggtgttgggc 835
>emb|BX470136.8| Zebrafish DNA sequence from clone CH211-113J6 in linkage group 1, complete sequence Length = 105837 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 attaattgattgattgattaa 333 ||||||||||||||||||||| Sbjct: 2579 attaattgattgattgattaa 2599
>gb|AC021325.5|AC021325 Homo sapiens chromosome , clone RP11-23N15, complete sequence Length = 180568 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 317 attgattgattgattaaaact 337 ||||||||||||||||||||| Sbjct: 107183 attgattgattgattaaaact 107203
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 181 aagacgaagacgaagaagacg 201 ||||||||||||||||||||| Sbjct: 7514591 aagacgaagacgaagaagacg 7514571 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 attaattgattgattgatta 332 |||||||||||||||||||| Sbjct: 21601177 attaattgattgattgatta 21601196
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 401 tggccatcttatctagctgta 421 ||||||||||||||||||||| Sbjct: 7753750 tggccatcttatctagctgta 7753730 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 aagacgaagacgaagaagacgacg 204 ||||||||||||||||||| |||| Sbjct: 21672889 aagacgaagacgaagaagaagacg 21672912 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 aattaattgattgattgatt 331 |||||||||||||||||||| Sbjct: 2107868 aattaattgattgattgatt 2107849
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 312 aattaattgattgattgatta 332 ||||||||||||||||||||| Sbjct: 2816651 aattaattgattgattgatta 2816631
>gb|AC108906.9| Oryza sativa chromosome 3 BAC OSJNBa0087C10 genomic sequence, complete sequence Length = 144487 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 181 aagacgaagacgaagaagacgacga 205 ||||||||||||||||||| ||||| Sbjct: 64584 aagacgaagacgaagaagatgacga 64560
>gb|AC156397.5| Mus musculus 6 BAC RP24-279P24 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 166910 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 attaattgattgattgattaa 333 ||||||||||||||||||||| Sbjct: 41509 attaattgattgattgattaa 41529
>gb|AC134234.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0019J12, complete sequence Length = 195583 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 ccaagacgaagacgaagaaga 199 ||||||||||||||||||||| Sbjct: 115033 ccaagacgaagacgaagaaga 115013
>gb|AC015969.9| Homo sapiens BAC clone RP11-218N6 from 2, complete sequence Length = 123576 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 313 attaattgattgattgattaa 333 ||||||||||||||||||||| Sbjct: 117505 attaattgattgattgattaa 117485
>dbj|AP003767.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0036F10 Length = 149415 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 312 aattaattgattgattgatta 332 ||||||||||||||||||||| Sbjct: 11839 aattaattgattgattgatta 11819
>dbj|AP003487.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0007O20 Length = 147363 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 312 aattaattgattgattgatta 332 ||||||||||||||||||||| Sbjct: 102182 aattaattgattgattgatta 102162
>dbj|AP003045.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0030H07 Length = 168253 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 312 aattaattgattgattgatta 332 ||||||||||||||||||||| Sbjct: 23649 aattaattgattgattgatta 23629
>dbj|AP002522.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0009G03 Length = 163526 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 312 aattaattgattgattgatta 332 ||||||||||||||||||||| Sbjct: 122328 aattaattgattgattgatta 122308
>dbj|AP004340.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0523A04 Length = 149049 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 401 tggccatcttatctagctgta 421 ||||||||||||||||||||| Sbjct: 2748 tggccatcttatctagctgta 2728
>dbj|AP005194.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0565A07 Length = 152191 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 401 tggccatcttatctagctgta 421 ||||||||||||||||||||| Sbjct: 97839 tggccatcttatctagctgta 97819
>emb|BX072534.9| Zebrafish DNA sequence from clone DKEY-16C1, complete sequence Length = 205800 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 attaattgattgattgattaa 333 ||||||||||||||||||||| Sbjct: 145880 attaattgattgattgattaa 145900
>emb|BX322631.8| Zebrafish DNA sequence from clone DKEY-173L11, complete sequence Length = 161710 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 317 attgattgattgattaaaact 337 ||||||||||||||||||||| Sbjct: 54392 attgattgattgattaaaact 54372
>emb|AL935041.4| Zebrafish DNA sequence from clone CH211-172J16, complete sequence Length = 155853 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 313 attaattgattgattgattaa 333 ||||||||||||||||||||| Sbjct: 87464 attaattgattgattgattaa 87444
>emb|AL929128.4| Zebrafish DNA sequence from clone CH211-203P17 in linkage group 17, complete sequence Length = 100859 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 311 aaattaattgattgattgatt 331 ||||||||||||||||||||| Sbjct: 48728 aaattaattgattgattgatt 48708
>dbj|AK106355.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-A05, full insert sequence Length = 2359 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 401 tggccatcttatctagctgta 421 ||||||||||||||||||||| Sbjct: 415 tggccatcttatctagctgta 395
>gb|AC105300.24| Mus musculus strain C57BL/6J clone rp23-291e5 map 17, complete sequence Length = 168882 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 aagacgaagacgaagaagacgacga 205 ||||||||||||| ||||||||||| Sbjct: 110130 aagacgaagacgacgaagacgacga 110154
>dbj|AK104696.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-A09, full insert sequence Length = 1821 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 aagacgaagacgaagaagacgacga 205 ||||||||||||||||||| ||||| Sbjct: 1605 aagacgaagacgaagaagatgacga 1629
>dbj|AK099212.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013070J17, full insert sequence Length = 1772 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 aagacgaagacgaagaagacgacga 205 ||||||||||||||||||| ||||| Sbjct: 1603 aagacgaagacgaagaagatgacga 1627
>dbj|AK070731.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061A01, full insert sequence Length = 1851 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 aagacgaagacgaagaagacgacga 205 ||||||||||||||||||| ||||| Sbjct: 1603 aagacgaagacgaagaagatgacga 1627
>ref|NM_209869.1| Eremothecium gossypii AEL344Wp (AEL344W), mRNA Length = 1623 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 aagacgaagacgaagaagacgacga 205 ||||||||||||||||||| ||||| Sbjct: 743 aagacgaagacgaagaagaagacga 767
>dbj|AK069387.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023016D17, full insert sequence Length = 3250 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 181 aagacgaagacgaagaagacg 201 ||||||||||||||||||||| Sbjct: 50 aagacgaagacgaagaagacg 30
>dbj|AK066641.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072M14, full insert sequence Length = 2798 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 ccaagacgaagacgaagaaga 199 ||||||||||||||||||||| Sbjct: 172 ccaagacgaagacgaagaaga 152
>emb|BX255893.5| Zebrafish DNA sequence from clone CH211-272H10 in linkage group 4, complete sequence Length = 99176 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 attaattgattgattgattaa 333 ||||||||||||||||||||| Sbjct: 27287 attaattgattgattgattaa 27307 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 attaattgattgattgattaa 333 ||||||||||||||||||||| Sbjct: 27223 attaattgattgattgattaa 27243
>emb|BX842240.3| Zebrafish DNA sequence from clone DKEY-13I15 in linkage group 20, complete sequence Length = 168556 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 313 attaattgattgattgattaa 333 ||||||||||||||||||||| Sbjct: 63873 attaattgattgattgattaa 63853
>emb|AL713869.6| Zebrafish DNA sequence from clone BUSM1-75P05 in linkage group 1 Contains a novel gene similar to GCP3 (spindle pole body protein), a novel gene and a CpG island, complete sequence Length = 104577 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 attaattgattgattgattaa 333 ||||||||||||||||||||| Sbjct: 13284 attaattgattgattgattaa 13304
>emb|CR388007.7| Zebrafish DNA sequence from clone DKEY-22G9 in linkage group 6, complete sequence Length = 221983 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 attaattgattgattgattaa 333 ||||||||||||||||||||| Sbjct: 77752 attaattgattgattgattaa 77772
>emb|CR391953.15| Zebrafish DNA sequence from clone DKEY-197M24 in linkage group 1, complete sequence Length = 134716 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 attaattgattgattgattaa 333 ||||||||||||||||||||| Sbjct: 125315 attaattgattgattgattaa 125335
>emb|BX294103.11| Zebrafish DNA sequence from clone CH211-257A8 in linkage group 9, complete sequence Length = 193969 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 311 aaattaattgattgattgatt 331 ||||||||||||||||||||| Sbjct: 171608 aaattaattgattgattgatt 171628
>emb|BX005274.11| Zebrafish DNA sequence from clone DKEY-77B9 in linkage group 19, complete sequence Length = 165012 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 311 aaattaattgattgattgatt 331 ||||||||||||||||||||| Sbjct: 85997 aaattaattgattgattgatt 85977
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 181 aagacgaagacgaagaagacg 201 ||||||||||||||||||||| Sbjct: 7584677 aagacgaagacgaagaagacg 7584657 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 attaattgattgattgatta 332 |||||||||||||||||||| Sbjct: 21911376 attaattgattgattgatta 21911395
>gb|AC151286.4| Mus musculus BAC clone RP23-368B8 from chromosome 17, complete sequence Length = 178835 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 307 acagaaattaattgattgattgatt 331 ||||||||| ||||||||||||||| Sbjct: 5629 acagaaattgattgattgattgatt 5605
>emb|AL935269.7| Zebrafish DNA sequence from clone DKEY-46J18, complete sequence Length = 177658 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 313 attaattgattgattgattaa 333 ||||||||||||||||||||| Sbjct: 7476 attaattgattgattgattaa 7456
>gb|AC132435.3| Mus musculus BAC clone RP23-223L12 from 10, complete sequence Length = 198383 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 311 aaattaattgattgattgatt 331 ||||||||||||||||||||| Sbjct: 114911 aaattaattgattgattgatt 114891
>emb|AL772353.9| Mouse DNA sequence from clone RP23-390I8 on chromosome 4, complete sequence Length = 115141 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 312 aattaattgattgattgatta 332 ||||||||||||||||||||| Sbjct: 1811 aattaattgattgattgatta 1791
>emb|BX323452.15| Zebrafish DNA sequence from clone DKEYP-56C5 in linkage group 25, complete sequence Length = 162709 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 311 aaattaattgattgattgatt 331 ||||||||||||||||||||| Sbjct: 7273 aaattaattgattgattgatt 7293
>gb|AC165087.4| Mus musculus BAC clone RP23-198K7 from chromosome 17, complete sequence Length = 211272 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 307 acagaaattaattgattgattgatt 331 ||||||||| ||||||||||||||| Sbjct: 97562 acagaaattgattgattgattgatt 97586
>emb|AL928795.6| Mouse DNA sequence from clone RP23-38B1 on chromosome 2, complete sequence Length = 28716 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 181 aagacgaagacgaagaagacgacga 205 ||||||||||||||||||| ||||| Sbjct: 20795 aagacgaagacgaagaagaagacga 20771
>emb|AL845293.5| Mouse DNA sequence from clone RP23-328P7 on chromosome 2, complete sequence Length = 212001 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 313 attaattgattgattgattaa 333 ||||||||||||||||||||| Sbjct: 30242 attaattgattgattgattaa 30222
>emb|AL772349.5| Mouse DNA sequence from clone RP23-466A17 on chromosome 4, complete sequence Length = 196489 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 312 aattaattgattgattgatta 332 ||||||||||||||||||||| Sbjct: 196300 aattaattgattgattgatta 196280
>emb|AL808119.6| Mouse DNA sequence from clone RP23-70J9 on chromosome 2, complete sequence Length = 228870 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 181 aagacgaagacgaagaagacgacgactaa 209 |||| ||||| |||||||||||||||||| Sbjct: 140294 aagaagaagaagaagaagacgacgactaa 140266
>emb|AL732593.7| Mouse DNA sequence from clone RP23-231L24 on chromosome 4, complete sequence Length = 227155 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 311 aaattaattgattgattgatt 331 ||||||||||||||||||||| Sbjct: 98822 aaattaattgattgattgatt 98802
>dbj|D88767.1| Nematode mRNA for EMB-5, complete cds Length = 4566 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 aagacgaagacgaagaagacgacga 205 ||||||||||||| ||||||||||| Sbjct: 140 aagacgaagacgatgaagacgacga 164
>dbj|D89822.1| Streptomyces sp. xyoA gene for xylitol oxidase, complete cds Length = 2794 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 462 ttggggatgacgttgcgggcg 482 ||||||||||||||||||||| Sbjct: 52 ttggggatgacgttgcgggcg 72
>ref|NM_119690.1| Arabidopsis thaliana unknown protein AT4G35240 mRNA, complete cds Length = 2487 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 183 gacgaagacgaagaagacgacgac 206 |||||||| ||||||||||||||| Sbjct: 379 gacgaagatgaagaagacgacgac 402
>ref|NM_102219.2| Arabidopsis thaliana unknown protein AT1G23710 mRNA, complete cds Length = 1176 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 182 agacgaagacgaagaagacgacgactaa 209 ||||||||| ||||| |||||||||||| Sbjct: 837 agacgaagaagaagacgacgacgactaa 864
>ref|NM_122200.3| Arabidopsis thaliana catalytic AT5G22940 mRNA, complete cds Length = 1956 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 caccaagacgaagacgaagaagac 200 |||||||||||||| ||||||||| Sbjct: 289 caccaagacgaagaagaagaagac 312
>ref|NM_121718.1| Arabidopsis thaliana unknown protein AT5G17120 mRNA, complete cds Length = 624 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 175 agcaccaagacgaagacgaagaagacgacgac 206 ||||| ||| |||||| ||||||||||||||| Sbjct: 80 agcacaaagtcgaagaggaagaagacgacgac 111
>gb|AC153156.1| Ornithorhynchus anatinus chromosome UNK clone OABb-289A1, complete sequence Length = 109794 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 312 aattaattgattgattgatt 331 |||||||||||||||||||| Sbjct: 94332 aattaattgattgattgatt 94351
>gb|AC110525.10| Mus musculus chromosome 8, clone RP23-82N11, complete sequence Length = 153281 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 312 aattaattgattgattgatt 331 |||||||||||||||||||| Sbjct: 105497 aattaattgattgattgatt 105516
>gb|AC161192.12| Mus musculus chromosome 5, clone RP23-382I10, complete sequence Length = 214985 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 312 aattaattgattgattgatt 331 |||||||||||||||||||| Sbjct: 99470 aattaattgattgattgatt 99489
>gb|AC102756.8| Mus musculus chromosome 3, clone RP24-167K1, complete sequence Length = 175712 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 312 aattaattgattgattgatt 331 |||||||||||||||||||| Sbjct: 50369 aattaattgattgattgatt 50388
>gb|BT019004.1| Zea mays clone Contig494.F mRNA sequence Length = 1412 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 464 ggggatgacgttgcgggcgacgag 487 |||||||||||||| ||||||||| Sbjct: 825 ggggatgacgttgctggcgacgag 802
>gb|AC116146.14| Mus musculus chromosome 7, clone RP24-168I21, complete sequence Length = 130931 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 aattaattgattgattgatt 331 |||||||||||||||||||| Sbjct: 2844 aattaattgattgattgatt 2825
>gb|AC121142.12| Mus musculus chromosome 10, clone RP23-479G23, complete sequence Length = 203838 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 ctctatttcccacagaaatt 315 |||||||||||||||||||| Sbjct: 23253 ctctatttcccacagaaatt 23272
>gb|AC119875.7| Mus musculus chromosome 1, clone RP24-291C20, complete sequence Length = 162379 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 312 aattaattgattgattgattaaaa 335 |||||||| ||||||||||||||| Sbjct: 101618 aattaattaattgattgattaaaa 101595
>gb|AC111023.12| Mus musculus chromosome 19, clone RP23-221A9, complete sequence Length = 228107 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 312 aattaattgattgattgatt 331 |||||||||||||||||||| Sbjct: 134270 aattaattgattgattgatt 134289
>gb|AC102595.9| Mus musculus chromosome 10, clone RP23-360M11, complete sequence Length = 223843 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 aattaattgattgattgatt 331 |||||||||||||||||||| Sbjct: 210186 aattaattgattgattgatt 210167
>gb|AC159614.7| Mus musculus chromosome 1, clone RP24-305O23, complete sequence Length = 156924 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 312 aattaattgattgattgatt 331 |||||||||||||||||||| Sbjct: 77635 aattaattgattgattgatt 77654
>gb|AC008194.9| Drosophila melanogaster clone BACR49A05, complete sequence Length = 181437 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 183 gacgaagacgaagaagacgacgac 206 ||||||||||| |||||||||||| Sbjct: 108126 gacgaagacgaggaagacgacgac 108103
>gb|AC091452.2| Mus musculus chromosome X clone RP23-124C16, complete sequence Length = 137750 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 312 aattaattgattgattgatt 331 |||||||||||||||||||| Sbjct: 131379 aattaattgattgattgatt 131398
>ref|XM_954754.1| Neurospora crassa OR74A hypothetical protein (NCU05856.1) partial mRNA Length = 3468 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 183 gacgaagacgaagaagacgacgac 206 ||||| |||||||||||||||||| Sbjct: 688 gacgatgacgaagaagacgacgac 711
>ref|XM_958236.1| Neurospora crassa OR74A hypothetical protein (NCU06855.1) partial mRNA Length = 1503 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 183 gacgaagacgaagaagacgacgac 206 |||||||||||||| ||||||||| Sbjct: 619 gacgaagacgaagacgacgacgac 642
>ref|XM_325710.1| Neurospora crassa OR74A hypothetical protein (NCU05856.1) partial mRNA Length = 3468 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 183 gacgaagacgaagaagacgacgac 206 ||||| |||||||||||||||||| Sbjct: 688 gacgatgacgaagaagacgacgac 711
>ref|XM_327140.1| Neurospora crassa OR74A hypothetical protein (NCU06855.1) partial mRNA Length = 1503 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 183 gacgaagacgaagaagacgacgac 206 |||||||||||||| ||||||||| Sbjct: 619 gacgaagacgaagacgacgacgac 642
>gb|BT014962.1| Arabidopsis thaliana At5g22940 gene, complete cds Length = 1410 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 caccaagacgaagacgaagaagac 200 |||||||||||||| ||||||||| Sbjct: 30 caccaagacgaagaagaagaagac 53
>gb|AC129040.5| Rattus norvegicus 6 BAC CH230-372A13 (Children's Hospital Oakland Research Institute) complete sequence Length = 176067 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 312 aattaattgattgattgatt 331 |||||||||||||||||||| Sbjct: 175929 aattaattgattgattgatt 175948
>gb|AC119954.12| Mus musculus chromosome 1, clone RP24-450P2, complete sequence Length = 179212 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 ttgcatgcggcagatgcatc 152 |||||||||||||||||||| Sbjct: 114699 ttgcatgcggcagatgcatc 114680
>gb|AC132248.3| Mus musculus BAC clone RP24-425H24 from chromosome 7, complete sequence Length = 195294 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 attgattgattgattaaaac 336 |||||||||||||||||||| Sbjct: 146681 attgattgattgattaaaac 146662
>ref|XM_707081.1| Candida albicans SC5314 vacuolar ATPase V1 domain subunit B (CaO19.13955), mRNA Length = 1539 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 aagacgaagacgaagaagac 200 |||||||||||||||||||| Sbjct: 1484 aagacgaagacgaagaagac 1503 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,102,762 Number of Sequences: 3902068 Number of extensions: 4102762 Number of successful extensions: 156381 Number of sequences better than 10.0: 453 Number of HSP's better than 10.0 without gapping: 463 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 151352 Number of HSP's gapped (non-prelim): 4962 length of query: 490 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 468 effective length of database: 17,147,199,772 effective search space: 8024889493296 effective search space used: 8024889493296 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)