Clone Name | rbart34h03 |
---|---|
Clone Library Name | barley_pub |
>TRPD_CAUCR (Q9A728) Anthranilate phosphoribosyltransferase (EC 2.4.2.18)| Length = 341 Score = 29.6 bits (65), Expect = 3.6 Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Frame = -2 Query: 411 PRPAQGAIASDAVRSWRAQGATAAD-AVCSRCAGRAIVPCTSTIDGLDV 268 P PAQ A A A+R +G T + A C+R RA +P D +DV Sbjct: 35 PTPAQVAAAVTAIR---LRGETVGEIAACARAMRRAAIPLEHPYDVIDV 80
>ATS17_HUMAN (Q8TE56) ADAMTS-17 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 17) (ADAM-TS 17) (ADAM-TS17) Length = 1095 Score = 29.6 bits (65), Expect = 3.6 Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 2/55 (3%) Frame = -2 Query: 411 PRPA--QGAIASDAVRSWRAQGATAADAVCSRCAGRAIVPCTSTIDGLDVRTCPR 253 PRPA Q D + W A + A C + + V CT++ D T PR Sbjct: 908 PRPAAVQSCEGQDCLSIWEASEWSQCSASCGKGVWKRTVACTNSQGKCDASTRPR 962
>UBP6_HUMAN (P35125) Ubiquitin carboxyl-terminal hydrolase 6 (EC 3.1.2.15)| (Ubiquitin thioesterase 6) (Ubiquitin-specific-processing protease 6) (Deubiquitinating enzyme 6) (Proto-oncogene TRE-2) Length = 1406 Score = 29.3 bits (64), Expect = 4.7 Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 6/70 (8%) Frame = +2 Query: 260 HVRTSSPSMVEVQGTMARPAHREQTASA-AVAPWARQERTASEAM-----APWAGRGRTA 421 H+R S+ + QG + PA REQ + A P +R +T + P A R Sbjct: 341 HLRASTKKLTRKQGDLPPPAKREQGSLAPRPVPASRGGKTLCKGYRQAPPGPPAQFQRPI 400 Query: 422 SAAVAPWAGR 451 +A PWA R Sbjct: 401 CSASPPWASR 410
>SGO1_NEUCR (Q872U8) Shugoshin| Length = 774 Score = 29.3 bits (64), Expect = 4.7 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 4/61 (6%) Frame = +2 Query: 269 TSSPSM----VEVQGTMARPAHREQTASAAVAPWARQERTASEAMAPWAGRGRTASAAVA 436 T++P+M V+ Q T+ PA E +AAV ++E + S P G+GR + + Sbjct: 587 TAAPAMTIPSVQEQSTLNLPAADETDENAAVEAQIQKELSNSITTRPRGGKGRQSMSRSV 646 Query: 437 P 439 P Sbjct: 647 P 647
>CESA6_ARATH (Q94JQ6) Cellulose synthase A catalytic subunit 6 [UDP-forming] (EC| 2.4.1.12) (AtCesA-6) (Isoxaben resistant protein 2) (Protein PROCUSTE1) (Protein Quill) (AraxCelA) Length = 1084 Score = 28.9 bits (63), Expect = 6.2 Identities = 12/22 (54%), Positives = 13/22 (59%) Frame = -1 Query: 373 PFLACPRCHCRRRRLFPVCRPC 308 PF+AC C FPVCRPC Sbjct: 54 PFVACNEC------AFPVCRPC 69
>OS25_PLARE (P19455) 25 kDa ookinete surface antigen precursor (Prs25)| Length = 217 Score = 28.5 bits (62), Expect = 8.1 Identities = 25/106 (23%), Positives = 44/106 (41%), Gaps = 6/106 (5%) Frame = -2 Query: 339 DAVCSR-----CAGRAIVPCTSTIDGLDVRTCPRPCMHDSRV**NCKDPTMHKPYGYFNL 175 D VC + +G C + + ++ TC + C + T++KP G F+ Sbjct: 27 DTVCKKGFLIQMSGHLECKCENDLVLVNEETCEEKVL-------KCDETTVNKPCGDFSK 79 Query: 174 IVFV*AAPVS-ACK*KSTHLFTCVVSFRLVRVVWMCVLYACTFMWC 40 + + +P+S ACK C + +V V C+L C + C Sbjct: 80 CIKIDGSPISYACK--------CNPGYDMVNNV--CILNECKNVTC 115 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,271,915 Number of Sequences: 219361 Number of extensions: 1338172 Number of successful extensions: 3780 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 3610 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3772 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2735358828 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)