No.
Definition
Score (bits)
E Value
1 ref|NM_186254.2| Oryza sativa (japonica cultivar-group), mRNA
48
0.025
2 dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...
48
0.025
3 dbj|AP004010.2| Oryza sativa (japonica cultivar-group) genomic D...
48
0.025
4 dbj|AK108897.1| Oryza sativa (japonica cultivar-group) cDNA clon...
48
0.025
5 ref|NM_186256.1| Oryza sativa (japonica cultivar-group), mRNA
44
0.39
6 ref|XM_476609.1| Oryza sativa (japonica cultivar-group), mRNA
44
0.39
7 dbj|AK108823.1| Oryza sativa (japonica cultivar-group) cDNA clon...
44
0.39
8 emb|BX914197.15| Zebrafish DNA sequence from clone DKEYP-81F11 i...
42
1.5
9 gb|AC091849.2| Homo sapiens chromosome 5 clone CTD-2245E15, comp...
42
1.5
10 gb|AC105352.2| Drosophila melanogaster X BAC RP98-45O17 (Roswell...
42
1.5
11 gb|BC089772.1| Rattus norvegicus mitogen activated protein kinas...
42
1.5
12 emb|Z16415.1|RNMAPKK R.norvegicus mRNA for MAP kinase kinase
42
1.5
13 gb|AE003430.4| Drosophila melanogaster chromosome X, section 14 ...
42
1.5
14 ref|NM_031643.3| Rattus norvegicus mitogen activated protein kin...
42
1.5
15 dbj|D13341.1|RATMAPKKA Rattus norvegicus mRNA for MAP kinase kin...
42
1.5
16 ref|NM_185007.1| Oryza sativa (japonica cultivar-group), mRNA
40
6.1
17 gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
40
6.1
18 gb|AC133098.7| Mus musculus BAC clone RP23-336L12 from chromosom...
40
6.1
19 gb|AC125076.4| Mus musculus BAC clone RP23-472F9 from chromosome...
40
6.1
20 gb|AC115298.6| Mus musculus BAC clone RP23-224G24 from X, comple...
40
6.1
21 emb|AL358785.10| Human DNA sequence from clone RP11-245E14 on ch...
40
6.1
22 emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete ...
40
6.1
23 gb|AC087894.15| Homo sapiens 12 BAC RP11-749H20 (Roswell Park Ca...
40
6.1
24 gb|AC084320.10| Oryza sativa chromosome 3 BAC OSJNBa0091J19 geno...
40
6.1
25 ref|XM_688200.1| PREDICTED: Danio rerio similar to parathyroid h...
40
6.1
26 gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple...
40
6.1
27 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...
40
6.1
28 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...
40
6.1
29 gb|AC108491.4| Homo sapiens BAC clone RP11-138I17 from 4, comple...
40
6.1
30 gb|AC113618.5| Homo sapiens BAC clone RP11-1367O10 from 2, compl...
40
6.1
31 gb|AC074224.3|AC074224 Mus musculus strain C57BL6/J chromosome 2...
40
6.1
32 gb|AC117376.3| Homo sapiens 12 BAC RP11-349K16 (Roswell Park Can...
40
6.1
33 gb|AC005678.1|AC005678 Homo sapiens PAC clone RP11-569I24 from 7...
40
6.1
34 dbj|AP002870.1| Oryza sativa (japonica cultivar-group) genomic D...
40
6.1
35 dbj|AK070713.1| Oryza sativa (japonica cultivar-group) cDNA clon...
40
6.1
36 emb|BX664720.7| Zebrafish DNA sequence from clone DKEYP-4H4 in l...
40
6.1
37 emb|AL928590.10| Mouse DNA sequence from clone RP23-26A12 on chr...
40
6.1
38 emb|AL845453.6| Mouse DNA sequence from clone RP23-296G5 on chro...
40
6.1
>dbj|AP008213.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
sequence
Length = 29644043
Score = 48.1 bits (24), Expect = 0.025
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 418 ggcatcggcggcagtggcaccttgggca 445
|||||||||||||||| |||||||||||
Sbjct: 2209301 ggcatcggcggcagtgccaccttgggca 2209274
Score = 44.1 bits (22), Expect = 0.39
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 412 acggacggcatcggcggcagtggcaccttgggca 445
||||| |||||||||||||| | |||||||||||
Sbjct: 2214519 acggatggcatcggcggcagcgtcaccttgggca 2214486
Score = 44.1 bits (22), Expect = 0.39
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 412 acggacggcatcggcggcagtggcaccttgggca 445
||||| |||||||||||||| | |||||||||||
Sbjct: 2212384 acggatggcatcggcggcagcgtcaccttgggca 2212351
Score = 44.1 bits (22), Expect = 0.39
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 412 acggacggcatcggcggcagtggcaccttgggca 445
||||| |||||||||||||| | |||||||||||
Sbjct: 2209517 acggatggcatcggcggcagcgtcaccttgggca 2209484
Score = 44.1 bits (22), Expect = 0.39
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 338 tcggcggcagtggcaccttgggcacg 363
|||||||||||| |||||||||||||
Sbjct: 2209297 tcggcggcagtgccaccttgggcacg 2209272
Score = 40.1 bits (20), Expect = 6.1
Identities = 62/76 (81%)
Strand = Plus / Minus
Query: 370 acggacggcatcggaggcaatggcaccttgggcaggtcggggacggacggcatcggcggc 429
||||| |||||||| |||| | ||||||||||| | | || | |||||||||||||||
Sbjct: 2214519 acggatggcatcggcggcagcgtcaccttgggcacggccggcatcgacggcatcggcggc 2214460
Query: 430 agtggcaccttgggca 445
|| | |||||| ||||
Sbjct: 2214459 agcgtcaccttcggca 2214444
Score = 40.1 bits (20), Expect = 6.1
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 418 ggcatcggcggcagtggcaccttgggca 445
|||||||||||||| | |||||||||||
Sbjct: 2214327 ggcatcggcggcagcgccaccttgggca 2214300
Score = 40.1 bits (20), Expect = 6.1
Identities = 62/76 (81%)
Strand = Plus / Minus
Query: 370 acggacggcatcggaggcaatggcaccttgggcaggtcggggacggacggcatcggcggc 429
||||| |||||||| |||| | ||||||||||| | | || | |||||||||||||||
Sbjct: 2212384 acggatggcatcggcggcagcgtcaccttgggcacggccggcatcgacggcatcggcggc 2212325
Query: 430 agtggcaccttgggca 445
|| | |||||| ||||
Sbjct: 2212324 agcgtcaccttcggca 2212309
>dbj|AP004010.2 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:OJ1351_C05
Length = 112465
Score = 48.1 bits (24), Expect = 0.025
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 418 ggcatcggcggcagtggcaccttgggca 445
|||||||||||||||| |||||||||||
Sbjct: 77203 ggcatcggcggcagtgccaccttgggca 77176
Score = 44.1 bits (22), Expect = 0.39
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 412 acggacggcatcggcggcagtggcaccttgggca 445
||||| |||||||||||||| | |||||||||||
Sbjct: 82421 acggatggcatcggcggcagcgtcaccttgggca 82388
Score = 44.1 bits (22), Expect = 0.39
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 412 acggacggcatcggcggcagtggcaccttgggca 445
||||| |||||||||||||| | |||||||||||
Sbjct: 80286 acggatggcatcggcggcagcgtcaccttgggca 80253
Score = 44.1 bits (22), Expect = 0.39
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 412 acggacggcatcggcggcagtggcaccttgggca 445
||||| |||||||||||||| | |||||||||||
Sbjct: 77419 acggatggcatcggcggcagcgtcaccttgggca 77386
Score = 44.1 bits (22), Expect = 0.39
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 338 tcggcggcagtggcaccttgggcacg 363
|||||||||||| |||||||||||||
Sbjct: 77199 tcggcggcagtgccaccttgggcacg 77174
Score = 40.1 bits (20), Expect = 6.1
Identities = 62/76 (81%)
Strand = Plus / Minus
Query: 370 acggacggcatcggaggcaatggcaccttgggcaggtcggggacggacggcatcggcggc 429
||||| |||||||| |||| | ||||||||||| | | || | |||||||||||||||
Sbjct: 82421 acggatggcatcggcggcagcgtcaccttgggcacggccggcatcgacggcatcggcggc 82362
Query: 430 agtggcaccttgggca 445
|| | |||||| ||||
Sbjct: 82361 agcgtcaccttcggca 82346
Score = 40.1 bits (20), Expect = 6.1
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 418 ggcatcggcggcagtggcaccttgggca 445
|||||||||||||| | |||||||||||
Sbjct: 82229 ggcatcggcggcagcgccaccttgggca 82202
Score = 40.1 bits (20), Expect = 6.1
Identities = 62/76 (81%)
Strand = Plus / Minus
Query: 370 acggacggcatcggaggcaatggcaccttgggcaggtcggggacggacggcatcggcggc 429
||||| |||||||| |||| | ||||||||||| | | || | |||||||||||||||
Sbjct: 80286 acggatggcatcggcggcagcgtcaccttgggcacggccggcatcgacggcatcggcggc 80227
Query: 430 agtggcaccttgggca 445
|| | |||||| ||||
Sbjct: 80226 agcgtcaccttcggca 80211
>emb|AL358785.10 | Human DNA sequence from clone RP11-245E14 on chromosome 6 Contains
the 3' end of the gene for a novel protein similar to
zinc finger protein 306 (ZNF306, ZFP47), the 3' end of
gene KIAA0426, ESTs, STSs and GSSs, complete sequence
Length = 17464
Score = 40.1 bits (20), Expect = 6.1
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 181 aaagtaaccatatggtttat 200
||||||||||||||||||||
Sbjct: 5195 aaagtaaccatatggtttat 5176
>emb|AL845453.6 | Mouse DNA sequence from clone RP23-296G5 on chromosome 2, complete
sequence
Length = 159565
Score = 40.1 bits (20), Expect = 6.1
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 78 acaccacacgcaccaatcga 97
||||||||||||||||||||
Sbjct: 15940 acaccacacgcaccaatcga 15921
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,998,662
Number of Sequences: 3902068
Number of extensions: 2998662
Number of successful extensions: 66552
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66244
Number of HSP's gapped (non-prelim): 301
length of query: 451
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 429
effective length of database: 17,147,199,772
effective search space: 7356148702188
effective search space used: 7356148702188
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)