Clone Name | rbart34h01 |
---|---|
Clone Library Name | barley_pub |
>emb|X58280.1|TAHSP26 T.aestivum mRNA for heat shock protein 26.6 Length = 940 Score = 414 bits (209), Expect = e-112 Identities = 269/289 (93%), Gaps = 10/289 (3%) Strand = Plus / Minus Query: 152 cacacctaggacagctgaaatcttcaagcctcagatgcagggttcagtcctcacgcgacc 211 ||||||| |||||||||||||||| |||||||||||||||||| ||||| |||| ||| | Sbjct: 869 cacacctcggacagctgaaatcttaaagcctcagatgcagggtacagtc-tcacacgaac 811 Query: 212 tcgtcactggacctgcacgtctatgaccttgcgctcggtctccctcttgggcacggacac 271 || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 810 tcatcactggacctgcacgtcgatgaccttgcgctcggtctccctcttgggcacggacac 751 Query: 272 gagcagcacgccgttcttgagctcggcgcgcacctggctcttgtcgcactcgtccggcag 331 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 750 gagcagcacgccgttcttgagctcggcccgcacctggctcttgtcgcactcgtccggcag 691 Query: 332 agcaaggcgcatgtcgtaggagctcacgctgcgctccttccaccacccgtcgccgcctcc 391 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 690 agcaaggcgcatgtcgtaggagctcacgctgcgctccttccaccacccgtcgccgcct-- 633 Query: 392 ggctgcctcgccctggccttccccggcctccttcttgtgctcgccgcgg 440 |||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 632 -------tcgccctgcccttcgccggcctccttcttgtgctcgccgcgg 591
>gb|AF097658.1|AF097658 Triticum aestivum heat shock protein HSP26 (hsp26.6) mRNA, hsp26.6-i allele, nuclear gene encoding chloroplast protein, complete cds Length = 1019 Score = 414 bits (209), Expect = e-112 Identities = 269/289 (93%), Gaps = 10/289 (3%) Strand = Plus / Minus Query: 152 cacacctaggacagctgaaatcttcaagcctcagatgcagggttcagtcctcacgcgacc 211 ||||||| |||||||||||||||| |||||||||||||||||| ||||| |||| ||| | Sbjct: 891 cacacctcggacagctgaaatcttaaagcctcagatgcagggtacagtc-tcacacgaac 833 Query: 212 tcgtcactggacctgcacgtctatgaccttgcgctcggtctccctcttgggcacggacac 271 || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 832 tcatcactggacctgcacgtcgatgaccttgcgctcggtctccctcttgggcacggacac 773 Query: 272 gagcagcacgccgttcttgagctcggcgcgcacctggctcttgtcgcactcgtccggcag 331 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 772 gagcagcacgccgttcttgagctcggcccgcacctggctcttgtcgcactcgtccggcag 713 Query: 332 agcaaggcgcatgtcgtaggagctcacgctgcgctccttccaccacccgtcgccgcctcc 391 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 agcaaggcgcatgtcgtaggagctcacgctgcgctccttccaccacccgtcgccgcct-- 655 Query: 392 ggctgcctcgccctggccttccccggcctccttcttgtgctcgccgcgg 440 |||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 654 -------tcgccctgcccttcgccggcctccttcttgtgctcgccgcgg 613
>gb|AF097657.1|AF097657 Triticum aestivum heat shock protein HSP26 (hsp26.6) mRNA, hsp26.6-g allele, nuclear gene encoding chloroplast protein, complete cds Length = 1080 Score = 385 bits (194), Expect = e-104 Identities = 218/226 (96%) Strand = Plus / Minus Query: 215 tcactggacctgcacgtctatgaccttgcgctcggtctccctcttgggcacggacacgag 274 ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 843 tcactggaccttcacgtcgatgaccttgcgctcggtctccctcttgggcacggacacgag 784 Query: 275 cagcacgccgttcttgagctcggcgcgcacctggctcttgtcgcactcgtccggcagagc 334 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 783 cagcacgccgttcttgagctcggcgcgcacctgactcttgtcgcactcgtccggcagagc 724 Query: 335 aaggcgcatgtcgtaggagctcacgctgcgctccttccaccacccgtcgccgcctccggc 394 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | || Sbjct: 723 caggcgcatgtcgtaggagctcacgctgcgctccttccaccacccgtcgccgccttccgc 664 Query: 395 tgcctcgccctggccttccccggcctccttcttgtgctcgccgcgg 440 ||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 663 tgcttcgccctggccttcgccggcctccttcttgtgctcgccgcgg 618 Score = 54.0 bits (27), Expect = 4e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 1 aatcgaaatgtatccagctgatcaagcagccggaaacttattccattgatctgccaagt 59 ||||||| ||| | |||||||||||||||||| | ||||||| ||||||| |||||||| Sbjct: 1066 aatcgaagtgtgtgcagctgatcaagcagccgaacacttatt-cattgatttgccaagt 1009 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 95 gagaggatcgaggaagaacggcacactac 123 |||||||||| ||||||||||||||||| Sbjct: 966 gagaggatcggagaagaacggcacactac 938
>emb|X67328.1|TAHSP266 T.aestivum mRNA for heat shock protein 26.6B Length = 1007 Score = 379 bits (191), Expect = e-102 Identities = 299/335 (89%), Gaps = 10/335 (2%) Strand = Plus / Minus Query: 107 gaagaacggcacactacatccacaaagaacaatcactagcaccgtcacacctaggacagc 166 |||||||||||| |||| || ||||||| || |||| |||| ||||| ||| ||||||| Sbjct: 905 gaagaacggcaccctacgtctacaaagagcacgcactcgcacggtcacgcctcggacagc 846 Query: 167 tgaaatcttcaagcctcagatgcagggttcagtc-ctcacgcgacctcgtcactggacct 225 |||||||| |||||||||||||||||| ||| ||| | | | ||| ||||||||||| Sbjct: 845 tgaaatctcaaagcctcagatgcagggtacagagtctcgcacaaactcatcactggacct 786 Query: 226 gcacgtctatgaccttgcgctcggtctccctcttgggcacggacacgagcagcacgccgt 285 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 785 gcacgtcgatgaccttgcgctcggtctccctcttgggcacggacacgagcagcacgccgt 726 Query: 286 tcttgagctcggcgcgcacctggctcttgtcgcactcgtccggcagagcaaggcgcatgt 345 ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 725 tcttgagctcggcgcgcacctggctcttgtcgcactcgtccggcagagccagtcgcatgt 666 Query: 346 cgtaggagctcacgctgcgctccttccaccacccgtcgccgcctccggctgcctcgccct 405 |||||||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 665 cgtaggagctcaagctgcgctccttccaccacccgtcgccgcct---------tcgccct 615 Query: 406 ggccttccccggcctccttcttgtgctcgccgcgg 440 | ||||| ||||||||||||||||||||||||||| Sbjct: 614 gcccttcgccggcctccttcttgtgctcgccgcgg 580 Score = 54.0 bits (27), Expect = 4e-04 Identities = 61/71 (85%), Gaps = 1/71 (1%) Strand = Plus / Minus Query: 27 cagccggaaacttattccattgatctgccaagtgtatttacatacagcactgcatatttc 86 |||||| | ||||||||||||||| |||||||| |||||| |||||||| ||| ||| Sbjct: 993 cagccgaacacttattccattgatttgccaagtacatttacgtacagcacgacat-gttc 935 Query: 87 tgcgcaacgag 97 ||||||||||| Sbjct: 934 tgcgcaacgag 924
>gb|AF097659.1|AF097659 Triticum aestivum heat shock protein HSP26 (hsp26.6) mRNA, hsp26.6-m allele, nuclear gene encoding chloroplast protein, complete cds Length = 1043 Score = 379 bits (191), Expect = e-102 Identities = 299/335 (89%), Gaps = 10/335 (2%) Strand = Plus / Minus Query: 107 gaagaacggcacactacatccacaaagaacaatcactagcaccgtcacacctaggacagc 166 |||||||||||| |||| || ||||||| || |||| |||| ||||| ||| ||||||| Sbjct: 911 gaagaacggcaccctacgtctacaaagagcacgcactcgcacggtcacgcctcggacagc 852 Query: 167 tgaaatcttcaagcctcagatgcagggttcagtc-ctcacgcgacctcgtcactggacct 225 |||||||| |||||||||||||||||| ||| ||| | | | ||| ||||||||||| Sbjct: 851 tgaaatctcaaagcctcagatgcagggtacagagtctcgcacaaactcatcactggacct 792 Query: 226 gcacgtctatgaccttgcgctcggtctccctcttgggcacggacacgagcagcacgccgt 285 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 791 gcacgtcgatgaccttgcgctcggtctccctcttgggcacggacacgagcagcacgccgt 732 Query: 286 tcttgagctcggcgcgcacctggctcttgtcgcactcgtccggcagagcaaggcgcatgt 345 ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 731 tcttgagctcggcgcgcacctggctcttgtcgcactcgtccggcagagccagtcgcatgt 672 Query: 346 cgtaggagctcacgctgcgctccttccaccacccgtcgccgcctccggctgcctcgccct 405 |||||||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 671 cgtaggagctcaagctgcgctccttccaccacccgtcgccgcct---------tcgccct 621 Query: 406 ggccttccccggcctccttcttgtgctcgccgcgg 440 | ||||| ||||||||||||||||||||||||||| Sbjct: 620 gcccttcgccggcctccttcttgtgctcgccgcgg 586 Score = 105 bits (53), Expect = 1e-19 Identities = 87/97 (89%), Gaps = 1/97 (1%) Strand = Plus / Minus Query: 1 aatcgaaatgtatccagctgatcaagcagccggaaacttattccattgatctgccaagtg 60 |||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||| Sbjct: 1025 aatcgaaatgtatccagctgatcaagcagccgaacacttattccattgatttgccaagta 966 Query: 61 tatttacatacagcactgcatatttctgcgcaacgag 97 |||||| |||||||| ||| |||||||||||||| Sbjct: 965 catttacgtacagcacgacat-gttctgcgcaacgag 930
>gb|AF097656.1|AF097656 Triticum aestivum heat shock protein HSP26 (hsp26.6) mRNA, hsp26.6-e allele, nuclear gene encoding chloroplast protein, complete cds Length = 1079 Score = 337 bits (170), Expect = 2e-89 Identities = 211/226 (93%), Gaps = 9/226 (3%) Strand = Plus / Minus Query: 215 tcactggacctgcacgtctatgaccttgcgctcggtctccctcttgggcacggacacgag 274 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 832 tcactggacctgcacgtcgatgaccttgcgctcggtctccctcttgggcacggacacgag 773 Query: 275 cagcacgccgttcttgagctcggcgcgcacctggctcttgtcgcactcgtccggcagagc 334 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 772 cagcacgccgttcttgagctcggcgcgcacctggctcttgtcgcactcgtctggcagagc 713 Query: 335 aaggcgcatgtcgtaggagctcacgctgcgctccttccaccacccgtcgccgcctccggc 394 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 caggcgcatgtcgtaggagctcacgctgcgctccttccaccacccgtcgccgcct----- 658 Query: 395 tgcctcgccctggccttccccggcctccttcttgtgctcgccgcgg 440 ||| |||| ||||| ||||||||||||||||||||||||||| Sbjct: 657 ----tcgacctgcccttcgccggcctccttcttgtgctcgccgcgg 616 Score = 125 bits (63), Expect = 1e-25 Identities = 169/203 (83%), Gaps = 11/203 (5%) Strand = Plus / Minus Query: 1 aatcgaaatgtatccagctgatcaagcagccggaaacttattccattgatctgccaagtg 60 ||||||| |||||||||||||||||||||||| | | |||||| || ||| |||||||| Sbjct: 1059 aatcgaagtgtatccagctgatcaagcagccgaacatttattc-atagatttgccaagta 1001 Query: 61 tatttacatacagcactgcatatttctgcgcaacg---------agaggatcgaggaaga 111 ||||||||||||||| ||| || |||||||||| ||||||||| ||||| Sbjct: 1000 catttacatacagcacgacatgtt-ctgcgcaacgtgcgcgcagagaggatcggagaaga 942 Query: 112 acggcacactacatccacaaagaacaatcactagcaccgtcacacctaggacagctgaaa 171 |||||||||||| | ||||||| || |||| |||| ||||||||| |||||||||||| Sbjct: 941 acggcacactacgcctacaaagagcacgcactcgcacggtcacacctcggacagctgaaa 882 Query: 172 tcttcaagcctcagatgcagggt 194 |||| |||||||||||||||||| Sbjct: 881 tcttaaagcctcagatgcagggt 859
>gb|AY153760.1| Agrostis stolonifera var. palustris chloroplast low molecular weight heat shock protein HSP26.8 gene, complete cds; nuclear gene for chloroplast product Length = 3098 Score = 307 bits (155), Expect = 2e-80 Identities = 211/229 (92%), Gaps = 3/229 (1%) Strand = Plus / Minus Query: 215 tcactggacctgcacgtctatgaccttgcgctcggtctccctcttgggcacggacacgag 274 |||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||| Sbjct: 1663 tcactggacctgcacgtcgatgaccttgcgctcggtctcggtcttgggcacggtgacgag 1604 Query: 275 cagcacgccgttcttgagctcggcgcgcacctggctcttgtcgcactcgtccggcagagc 334 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 1603 cagcacgccgttcttgagctcggcgcgcacctggctcttgtcgcactcgtcgggcagcgt 1544 Query: 335 aaggcgcatgtcgtaggagctcacgctgcgctccttccaccacccgtcgcc---gcctcc 391 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 1543 caggcgcatgtcgtaggagctcacgctgcgctccttccaccacccgtcgccctgtccttc 1484 Query: 392 ggctgcctcgccctggccttccccggcctccttcttgtgctcgccgcgg 440 ||| | |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1483 ggcgccgtcgccctggccttcgccggcctccttcttgtgctcgccgcgg 1435
>gb|AY153762.1| Agrostis stolonifera var. palustris chloroplast low molecular weight heat shock protein HSP26.7b gene, complete cds; nuclear gene for chloroplast product Length = 3897 Score = 268 bits (135), Expect = 1e-68 Identities = 206/229 (89%), Gaps = 3/229 (1%) Strand = Plus / Minus Query: 215 tcactggacctgcacgtctatgaccttgcgctcggtctccctcttgggcacggacacgag 274 |||||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||| Sbjct: 2923 tcactggacctgcacgtcgatgaccttgcgctcggtctcggtcttgggcacggagacgag 2864 Query: 275 cagcacgccgttcttgagctcggcgcgcacctggctcttgtcgcactcgtccggcagagc 334 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || Sbjct: 2863 cagcacgccgttcttgagctcggcgcgcacctggctcttgtcgcactcgtcaggcagcgc 2804 Query: 335 aaggcgcatgtcgtaggagctcacgctgcgctccttccaccacccgtcgccg---cctcc 391 | ||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 2803 caaacgcatgtcgtaggagctcacgctgcgctccttccaccacccgtcgccctgtccttc 2744 Query: 392 ggctgcctcgccctggccttccccggcctccttcttgtgctcgccgcgg 440 || | || ||||||||||| | ||||||||||||||||||||||| Sbjct: 2743 cgcgccgtcaccctggccttcgcttacctccttcttgtgctcgccgcgg 2695
>gb|AY153761.1| Agrostis stolonifera var. palustris chloroplast low molecular weight heat shock protein HSP26.7a gene, complete cds; nuclear gene for chloroplast product Length = 4216 Score = 268 bits (135), Expect = 1e-68 Identities = 206/229 (89%), Gaps = 3/229 (1%) Strand = Plus / Minus Query: 215 tcactggacctgcacgtctatgaccttgcgctcggtctccctcttgggcacggacacgag 274 |||||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||| Sbjct: 3233 tcactggacctgcacgtcgatgaccttgcgctcggtctcggtcttgggcacggagacgag 3174 Query: 275 cagcacgccgttcttgagctcggcgcgcacctggctcttgtcgcactcgtccggcagagc 334 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || Sbjct: 3173 cagcacgccgttcttgagctcggcgcgcacctggctcttgtcgcactcgtcaggcagcgc 3114 Query: 335 aaggcgcatgtcgtaggagctcacgctgcgctccttccaccacccgtcgccg---cctcc 391 | ||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 3113 caaacgcatgtcgtaggagctcacgctgcgctccttccaccacccgtcgccctgtccttc 3054 Query: 392 ggctgcctcgccctggccttccccggcctccttcttgtgctcgccgcgg 440 || | || ||||||||||| | ||||||||||||||||||||||| Sbjct: 3053 cgcgccgtcaccctggccttcgcttacctccttcttgtgctcgccgcgg 3005
>gb|AY153759.1| Agrostis stolonifera var. palustris chloroplast low molecular weight heat shock protein HSP26.2m gene, complete cds; nuclear gene for chloroplast product Length = 2922 Score = 268 bits (135), Expect = 1e-68 Identities = 162/171 (94%) Strand = Plus / Minus Query: 215 tcactggacctgcacgtctatgaccttgcgctcggtctccctcttgggcacggacacgag 274 |||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||| Sbjct: 1636 tcactggacctgcacgtcgatgaccttgcgctcggtctcggtcttgggcacggtgacgag 1577 Query: 275 cagcacgccgttcttgagctcggcgcgcacctggctcttgtcgcactcgtccggcagagc 334 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1576 cagcacgccgttcttgagctcggcgcgcacctggctcttgtcgcactcgtcgggcagact 1517 Query: 335 aaggcgcatgtcgtaggagctcacgctgcgctccttccaccacccgtcgcc 385 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1516 caggcgcatgtcgtaggagctcacgctgcgctccttccaccacccgtcgcc 1466 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 399 tcgccctggccttccccggcctccttcttgtgctcgccgcgg 440 |||||||||||||| || |||||||||||||||||||||||| Sbjct: 1470 tcgccctggccttcgccagcctccttcttgtgctcgccgcgg 1429
>gb|AY153758.1| Agrostis stolonifera var. palustris chloroplast low molecular weight heat shock protein HSP26.2 gene, complete cds; nuclear gene for chloroplast product Length = 3064 Score = 268 bits (135), Expect = 1e-68 Identities = 162/171 (94%) Strand = Plus / Minus Query: 215 tcactggacctgcacgtctatgaccttgcgctcggtctccctcttgggcacggacacgag 274 |||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||| Sbjct: 1633 tcactggacctgcacgtcgatgaccttgcgctcggtctcggtcttgggcacggtgacgag 1574 Query: 275 cagcacgccgttcttgagctcggcgcgcacctggctcttgtcgcactcgtccggcagagc 334 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1573 cagcacgccgttcttgagctcggcgcgcacctggctcttgtcgcactcgtcgggcagact 1514 Query: 335 aaggcgcatgtcgtaggagctcacgctgcgctccttccaccacccgtcgcc 385 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1513 caggcgcatgtcgtaggagctcacgctgcgctccttccaccacccgtcgcc 1463 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 399 tcgccctggccttccccggcctccttcttgtgctcgccgcgg 440 |||||||||||||| || |||||||||||||||||||||||| Sbjct: 1467 tcgccctggccttcgccagcctccttcttgtgctcgccgcgg 1426
>gb|AF019144.1|AF019144 Agrostis stolonifera var. palustris low molecular weight heat shock protein mRNA, complete cds Length = 1022 Score = 268 bits (135), Expect = 1e-68 Identities = 162/171 (94%) Strand = Plus / Minus Query: 215 tcactggacctgcacgtctatgaccttgcgctcggtctccctcttgggcacggacacgag 274 |||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||| Sbjct: 833 tcactggacctgcacgtcgatgaccttgcgctcggtctcggtcttgggcacggtgacgag 774 Query: 275 cagcacgccgttcttgagctcggcgcgcacctggctcttgtcgcactcgtccggcagagc 334 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 773 cagcacgccgttcttgagctcggcgcgcacctggctcttgtcgcactcgtcgggcagact 714 Query: 335 aaggcgcatgtcgtaggagctcacgctgcgctccttccaccacccgtcgcc 385 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 caggcgcatgtcgtaggagctcacgctgcgctccttccaccacccgtcgcc 663 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 399 tcgccctggccttccccggcctccttcttgtgctcgccgcgg 440 |||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 667 tcgccctggccttcgccgacctccttcttgtgctcgccgcgg 626
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 226 bits (114), Expect = 5e-56 Identities = 156/170 (91%) Strand = Plus / Minus Query: 217 actggacctgcacgtctatgaccttgcgctcggtctccctcttgggcacggacacgagca 276 |||||||||||||||| |||||||||||||| |||| |||||||||||| ||||||| Sbjct: 7667449 actggacctgcacgtcgatgaccttgcgctccacctccgtcttgggcacggtgacgagca 7667390 Query: 277 gcacgccgttcttgagctcggcgcgcacctggctcttgtcgcactcgtccggcagagcaa 336 ||||||||||||||||||||||||| |||| |||||||||||||||||| || || || | Sbjct: 7667389 gcacgccgttcttgagctcggcgcggaccttgctcttgtcgcactcgtcggggagcgcga 7667330 Query: 337 ggcgcatgtcgtaggagctcacgctgcgctccttccaccacccgtcgccg 386 | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7667329 gccgcatgtcgtaggagctcacgctgcgctccttccaccacccgtcgccg 7667280 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 276 agcacgccgttcttgagctcggcgcgcacctggctcttgtcgcactcgtccggcagagca 335 ||||| || ||||| ||||||||||| |||| ||||||||||| | | | || || | Sbjct: 34809796 agcacaccattctttagctcggcgcggaccttgctcttgtcgcccacattggggagcacg 34809855 Query: 336 aggcgcatgtcgtaggagctcacgctgcgctccttccaccaccc 379 || ||||||| ||||||||||| ||||||||||||||||||||| Sbjct: 34809856 agccgcatgttgtaggagctcatgctgcgctccttccaccaccc 34809899
>gb|AC129008.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0096L14, from chromosome 3, complete sequence Length = 131142 Score = 226 bits (114), Expect = 5e-56 Identities = 156/170 (91%) Strand = Plus / Plus Query: 217 actggacctgcacgtctatgaccttgcgctcggtctccctcttgggcacggacacgagca 276 |||||||||||||||| |||||||||||||| |||| |||||||||||| ||||||| Sbjct: 47841 actggacctgcacgtcgatgaccttgcgctccacctccgtcttgggcacggtgacgagca 47900 Query: 277 gcacgccgttcttgagctcggcgcgcacctggctcttgtcgcactcgtccggcagagcaa 336 ||||||||||||||||||||||||| |||| |||||||||||||||||| || || || | Sbjct: 47901 gcacgccgttcttgagctcggcgcggaccttgctcttgtcgcactcgtcggggagcgcga 47960 Query: 337 ggcgcatgtcgtaggagctcacgctgcgctccttccaccacccgtcgccg 386 | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47961 gccgcatgtcgtaggagctcacgctgcgctccttccaccacccgtcgccg 48010
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 226 bits (114), Expect = 5e-56 Identities = 156/170 (91%) Strand = Plus / Minus Query: 217 actggacctgcacgtctatgaccttgcgctcggtctccctcttgggcacggacacgagca 276 |||||||||||||||| |||||||||||||| |||| |||||||||||| ||||||| Sbjct: 7665284 actggacctgcacgtcgatgaccttgcgctccacctccgtcttgggcacggtgacgagca 7665225 Query: 277 gcacgccgttcttgagctcggcgcgcacctggctcttgtcgcactcgtccggcagagcaa 336 ||||||||||||||||||||||||| |||| |||||||||||||||||| || || || | Sbjct: 7665224 gcacgccgttcttgagctcggcgcggaccttgctcttgtcgcactcgtcggggagcgcga 7665165 Query: 337 ggcgcatgtcgtaggagctcacgctgcgctccttccaccacccgtcgccg 386 | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7665164 gccgcatgtcgtaggagctcacgctgcgctccttccaccacccgtcgccg 7665115 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 276 agcacgccgttcttgagctcggcgcgcacctggctcttgtcgcactcgtccggcagagca 335 ||||| || ||||| ||||||||||| |||| ||||||||||| | | | || || | Sbjct: 34899868 agcacaccattctttagctcggcgcggaccttgctcttgtcgcccacattggggagcacg 34899927 Query: 336 aggcgcatgtcgtaggagctcacgctgcgctccttccaccaccc 379 || ||||||| ||||||||||| ||||||||||||||||||||| Sbjct: 34899928 agccgcatgttgtaggagctcatgctgcgctccttccaccaccc 34899971
>dbj|AK120048.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-H09, full insert sequence Length = 1013 Score = 226 bits (114), Expect = 5e-56 Identities = 156/170 (91%) Strand = Plus / Minus Query: 217 actggacctgcacgtctatgaccttgcgctcggtctccctcttgggcacggacacgagca 276 |||||||||||||||| |||||||||||||| |||| |||||||||||| ||||||| Sbjct: 838 actggacctgcacgtcgatgaccttgcgctccacctccgtcttgggcacggtgacgagca 779 Query: 277 gcacgccgttcttgagctcggcgcgcacctggctcttgtcgcactcgtccggcagagcaa 336 ||||||||||||||||||||||||| |||| |||||||||||||||||| || || || | Sbjct: 778 gcacgccgttcttgagctcggcgcggaccttgctcttgtcgcactcgtcggggagcgcga 719 Query: 337 ggcgcatgtcgtaggagctcacgctgcgctccttccaccacccgtcgccg 386 | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 718 gccgcatgtcgtaggagctcacgctgcgctccttccaccacccgtcgccg 669
>dbj|AK120045.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-F09, full insert sequence Length = 1013 Score = 226 bits (114), Expect = 5e-56 Identities = 156/170 (91%) Strand = Plus / Minus Query: 217 actggacctgcacgtctatgaccttgcgctcggtctccctcttgggcacggacacgagca 276 |||||||||||||||| |||||||||||||| |||| |||||||||||| ||||||| Sbjct: 838 actggacctgcacgtcgatgaccttgcgctccacctccgtcttgggcacggtgacgagca 779 Query: 277 gcacgccgttcttgagctcggcgcgcacctggctcttgtcgcactcgtccggcagagcaa 336 ||||||||||||||||||||||||| |||| |||||||||||||||||| || || || | Sbjct: 778 gcacgccgttcttgagctcggcgcggaccttgctcttgtcgcactcgtcggggagcgcga 719 Query: 337 ggcgcatgtcgtaggagctcacgctgcgctccttccaccacccgtcgccg 386 | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 718 gccgcatgtcgtaggagctcacgctgcgctccttccaccacccgtcgccg 669
>dbj|AK063618.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-E01, full insert sequence Length = 995 Score = 226 bits (114), Expect = 5e-56 Identities = 156/170 (91%) Strand = Plus / Minus Query: 217 actggacctgcacgtctatgaccttgcgctcggtctccctcttgggcacggacacgagca 276 |||||||||||||||| |||||||||||||| |||| |||||||||||| ||||||| Sbjct: 838 actggacctgcacgtcgatgaccttgcgctccacctccgtcttgggcacggtgacgagca 779 Query: 277 gcacgccgttcttgagctcggcgcgcacctggctcttgtcgcactcgtccggcagagcaa 336 ||||||||||||||||||||||||| |||| |||||||||||||||||| || || || | Sbjct: 778 gcacgccgttcttgagctcggcgcggaccttgctcttgtcgcactcgtcggggagcgcga 719 Query: 337 ggcgcatgtcgtaggagctcacgctgcgctccttccaccacccgtcgccg 386 | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 718 gccgcatgtcgtaggagctcacgctgcgctccttccaccacccgtcgccg 669
>dbj|AB020973.1| Oryza sativa mRNA for heat shock protein 26, complete cds Length = 1000 Score = 226 bits (114), Expect = 5e-56 Identities = 156/170 (91%) Strand = Plus / Minus Query: 217 actggacctgcacgtctatgaccttgcgctcggtctccctcttgggcacggacacgagca 276 |||||||||||||||| |||||||||||||| |||| |||||||||||| ||||||| Sbjct: 824 actggacctgcacgtcgatgaccttgcgctccacctccgtcttgggcacggtgacgagca 765 Query: 277 gcacgccgttcttgagctcggcgcgcacctggctcttgtcgcactcgtccggcagagcaa 336 ||||||||||||||||||||||||| |||| |||||||||||||||||| || || || | Sbjct: 764 gcacgccgttcttgagctcggcgcggaccttgctcttgtcgcactcgtcggggagcgcga 705 Query: 337 ggcgcatgtcgtaggagctcacgctgcgctccttccaccacccgtcgccg 386 | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 704 gccgcatgtcgtaggagctcacgctgcgctccttccaccacccgtcgccg 655
>gb|L28712.1|MZEHSP26X Zea mays heat shock protein 26 (HSP26) mRNA, complete cds; nuclear gene for plastid product Length = 946 Score = 210 bits (106), Expect = 3e-51 Identities = 154/170 (90%) Strand = Plus / Minus Query: 217 actggacctgcacgtctatgaccttgcgctcggtctccctcttgggcacggacacgagca 276 |||||||||||||||| |||||||||||||| ||| |||||||||||| ||||| | Sbjct: 811 actggacctgcacgtcgatgaccttgcgctccacctcggtcttgggcacggtgacgagga 752 Query: 277 gcacgccgttcttgagctcggcgcgcacctggctcttgtcgcactcgtccggcagagcaa 336 |||||||||||||||||||||| ||||||| ||||||||||||||| |||||||| || | Sbjct: 751 gcacgccgttcttgagctcggcccgcaccttgctcttgtcgcactcatccggcagcgcca 692 Query: 337 ggcgcatgtcgtaggagctcacgctgcgctccttccaccacccgtcgccg 386 | |||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 691 gccgcatgtcgtaggagctcacgctgcgctgcttccaccacccgtcgccg 642
>gb|AC092557.7| Oryza sativa chromosome 3 BAC OSJNBa0096I06 genomic sequence, complete sequence Length = 164352 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Minus Query: 276 agcacgccgttcttgagctcggcgcgcacctggctcttgtcgcactcgtccggcagagca 335 ||||| || ||||| ||||||||||| |||| ||||||||||| | | | || || | Sbjct: 52854 agcacaccattctttagctcggcgcggaccttgctcttgtcgcccacattggggagcacg 52795 Query: 336 aggcgcatgtcgtaggagctcacgctgcgctccttccaccaccc 379 || ||||||| ||||||||||| ||||||||||||||||||||| Sbjct: 52794 agccgcatgttgtaggagctcatgctgcgctccttccaccaccc 52751
>gb|L41504.1|WHTHSP26MB Triticum aestivum heat shock protein (hsp266T1) mRNA, partial cds; nuclear gene for plastid product Length = 257 Score = 67.9 bits (34), Expect = 3e-08 Identities = 62/70 (88%), Gaps = 1/70 (1%) Strand = Plus / Minus Query: 1 aatcgaaatgtatccagctgatcaagcagccggaaacttattccattgatctgccaagtg 60 ||||||| ||||||||||||| |||||||||| | ||||||| ||||||| |||||||| Sbjct: 254 aatcgaagtgtatccagctgagcaagcagccgaacacttatt-cattgatttgccaagta 196 Query: 61 tatttacata 70 ||||||||| Sbjct: 195 catttacata 186 Score = 52.0 bits (26), Expect = 0.002 Identities = 125/155 (80%), Gaps = 6/155 (3%) Strand = Plus / Minus Query: 95 gagaggatcgaggaagaacggcacactacatccacaaagaacaatcactagc--accgtc 152 |||||||||| ||||||||||||||||| | ||||||| || ||||| || || ||| Sbjct: 154 gagaggatcggagaagaacggcacactacgcctacaaagagcactcactcgccgacggtc 95 Query: 153 acacctaggacagctgaaatcttcaagcctcagatgcagggttcagtc---ctcacgcga 209 | | | |||||||||||||||| |||||||||| |||||| ||||| | || || Sbjct: 94 ata-ttgggacagctgaaatcttaaagcctcagacacagggtacagtctcgcacatacgt 36 Query: 210 cctcgtcactggacctgcacgtctatgaccttgcg 244 ||| ||||||||||| |||||| ||||||||||| Sbjct: 35 actcatcactggaccttcacgtcgatgaccttgcg 1
>gb|L41503.1|WHTHSP26MA Triticum aestivum heat shock protein (hsp266G2) mRNA, partial cds; nuclear gene for plastid product Length = 267 Score = 60.0 bits (30), Expect = 6e-06 Identities = 61/70 (87%), Gaps = 1/70 (1%) Strand = Plus / Minus Query: 1 aatcgaaatgtatccagctgatcaagcagccggaaacttattccattgatctgccaagtg 60 ||||||| ||| | |||||||||||||||||| | ||||||| ||||||| |||||||| Sbjct: 254 aatcgaagtgtgtgcagctgatcaagcagccgaacacttatt-cattgatttgccaagta 196 Query: 61 tatttacata 70 ||||||||| Sbjct: 195 catttacata 186 Score = 52.0 bits (26), Expect = 0.002 Identities = 125/155 (80%), Gaps = 6/155 (3%) Strand = Plus / Minus Query: 95 gagaggatcgaggaagaacggcacactacatccacaaagaacaatcactagc--accgtc 152 |||||||||| ||||||||||||||||| | ||||||| || ||||| || || ||| Sbjct: 154 gagaggatcggagaagaacggcacactacgcctacaaagagcactcactcgccgacggtc 95 Query: 153 acacctaggacagctgaaatcttcaagcctcagatgcagggttcagtc---ctcacgcga 209 | | | |||||||||||||||| |||||||||| |||||| ||||| | || || Sbjct: 94 ata-ttgggacagctgaaatcttaaagcctcagacacagggtacagtctcgcacatacgt 36 Query: 210 cctcgtcactggacctgcacgtctatgaccttgcg 244 ||| ||||||||||| |||||| ||||||||||| Sbjct: 35 actcatcactggaccttcacgtcgatgaccttgcg 1
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 288 ttgagctcggcgcgcacctggc 309 |||||||||||||||||||||| Sbjct: 4020632 ttgagctcggcgcgcacctggc 4020611
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 288 ttgagctcggcgcgcacctggc 309 |||||||||||||||||||||| Sbjct: 4022423 ttgagctcggcgcgcacctggc 4022402
>ref|NM_188788.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1131 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 380 gtcgccgcctccggctgcctc 400 ||||||||||||||||||||| Sbjct: 37 gtcgccgcctccggctgcctc 57
>gb|AC158304.11| Mus musculus chromosome 7, clone RP24-192F23, complete sequence Length = 166451 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 377 cccgtcgccgcctccggctgcctcg 401 ||||||||||||||| ||||||||| Sbjct: 56249 cccgtcgccgcctccagctgcctcg 56225
>ref|XM_470333.1| Oryza sativa (japonica cultivar-group), mRNA Length = 540 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 359 gctgcgctccttccaccaccc 379 ||||||||||||||||||||| Sbjct: 536 gctgcgctccttccaccaccc 516
>ref|XM_479029.1| Oryza sativa (japonica cultivar-group), mRNA Length = 639 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 368 cttccaccacccgtcgccgcc 388 ||||||||||||||||||||| Sbjct: 531 cttccaccacccgtcgccgcc 551
>ref|NM_019412.1| Mus musculus periaxin (Prx), transcript variant 2, mRNA Length = 5432 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 377 cccgtcgccgcctccggctgcctcg 401 ||||||||||||||| ||||||||| Sbjct: 1427 cccgtcgccgcctccagctgcctcg 1451
>ref|NM_198048.1| Mus musculus periaxin (Prx), transcript variant 1, mRNA Length = 4840 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 377 cccgtcgccgcctccggctgcctcg 401 ||||||||||||||| ||||||||| Sbjct: 835 cccgtcgccgcctccagctgcctcg 859
>gb|BC068135.1| Mus musculus periaxin, mRNA (cDNA clone MGC:92965 IMAGE:30354483), complete cds Length = 4502 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 377 cccgtcgccgcctccggctgcctcg 401 ||||||||||||||| ||||||||| Sbjct: 649 cccgtcgccgcctccagctgcctcg 673
>gb|AC007789.1| Oryza sativa BAC OSJNBa0049B20 genomic sequence, complete sequence Length = 182756 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 380 gtcgccgcctccggctgcctc 400 ||||||||||||||||||||| Sbjct: 154309 gtcgccgcctccggctgcctc 154329
>emb|AJ222969.1|MMAJ2969 Mus musculus mRNA for S-periaxin Length = 5432 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 377 cccgtcgccgcctccggctgcctcg 401 ||||||||||||||| ||||||||| Sbjct: 1427 cccgtcgccgcctccagctgcctcg 1451
>emb|AJ222968.1|MMAJ2968 Mus musculus mRNA for L-periaxin Length = 4840 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 377 cccgtcgccgcctccggctgcctcg 401 ||||||||||||||| ||||||||| Sbjct: 835 cccgtcgccgcctccagctgcctcg 859
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 368 cttccaccacccgtcgccgcc 388 ||||||||||||||||||||| Sbjct: 24409428 cttccaccacccgtcgccgcc 24409408
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 371 ccaccacccgtcgccgcctcc 391 ||||||||||||||||||||| Sbjct: 19573808 ccaccacccgtcgccgcctcc 19573828 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 380 gtcgccgcctccggctgcctc 400 ||||||||||||||||||||| Sbjct: 8190188 gtcgccgcctccggctgcctc 8190208
>dbj|AK173220.1| Mus musculus mRNA for mKIAA1620 protein Length = 4465 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 377 cccgtcgccgcctccggctgcctcg 401 ||||||||||||||| ||||||||| Sbjct: 633 cccgtcgccgcctccagctgcctcg 657
>dbj|AP004362.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0014E04 Length = 146710 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 371 ccaccacccgtcgccgcctcc 391 ||||||||||||||||||||| Sbjct: 42260 ccaccacccgtcgccgcctcc 42280
>dbj|AP002865.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0034C11 Length = 139399 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 380 gtcgccgcctccggctgcctc 400 ||||||||||||||||||||| Sbjct: 107906 gtcgccgcctccggctgcctc 107926
>dbj|AP003840.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1634_B10 Length = 100294 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 368 cttccaccacccgtcgccgcc 388 ||||||||||||||||||||| Sbjct: 35295 cttccaccacccgtcgccgcc 35275
>gb|AY854878.1| Drosophila americana strain G96.47 period protein (per) gene, partial cds Length = 1018 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccgtcgccgcctccggctgc 397 |||||||||||||||||||| Sbjct: 937 ccgtcgccgcctccggctgc 918
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 40.1 bits (20), Expect = 5.9 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 39 tattccat-tgatctgccaagtgtattt 65 |||||||| ||||||||||||||||||| Sbjct: 1000007 tattccatctgatctgccaagtgtattt 999980
>ref|XM_483376.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2154 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccgtcgccgcctccggctgc 397 |||||||||||||||||||| Sbjct: 1855 ccgtcgccgcctccggctgc 1836
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 ctgcacgtctatgaccttgc 243 |||||||||||||||||||| Sbjct: 3276896 ctgcacgtctatgaccttgc 3276877
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 gttcttgagctcggcgcgca 303 |||||||||||||||||||| Sbjct: 1123096 gttcttgagctcggcgcgca 1123115
>gb|AC025778.8| Homo sapiens chromosome 16 clone CTD-2504F3, complete sequence Length = 208417 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 ccctggccttccccggcctc 421 |||||||||||||||||||| Sbjct: 128095 ccctggccttccccggcctc 128114
>gb|AC003026.1|HUAC003026 Human Chromosome 16 BAC clone CIT987SK-118F2, complete sequence Length = 68355 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 ccctggccttccccggcctc 421 |||||||||||||||||||| Sbjct: 6650 ccctggccttccccggcctc 6631
>gb|AC004932.4| Homo sapiens PAC clone RP5-943F2 from 7, complete sequence Length = 151183 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 tgggcacggacacgagcagc 278 |||||||||||||||||||| Sbjct: 7328 tgggcacggacacgagcagc 7309
>gb|AC112662.7| Mus musculus chromosome 5, clone RP23-467F2, complete sequence Length = 200679 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 aagtgtatttacatacagca 75 |||||||||||||||||||| Sbjct: 28528 aagtgtatttacatacagca 28509
>emb|X06292.1|HSFESFPS Human c-fes/fps proto-oncogene Length = 12263 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 ccggctgcctcgccctggcc 409 |||||||||||||||||||| Sbjct: 9824 ccggctgcctcgccctggcc 9843
>emb|AL121827.34|HSA261N11 Human DNA sequence from clone RP11-261N11 on chromosome 20, complete sequence Length = 184223 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 388 ctccggctgcctcgccctggcctt 411 |||| ||||||||||||||||||| Sbjct: 175331 ctccagctgcctcgccctggcctt 175308
>emb|BX294134.1| Pirellula sp. strain 1 complete genome; segment 2/24 Length = 304450 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 258 ttgggcacggacacgagcagcacgccgt 285 ||||||||| |||||| ||||||||||| Sbjct: 286041 ttgggcacgtacacgatcagcacgccgt 286068
>gb|AY304314.1| Henicorhina leucophrys JTW133 ATPase subunit 8 and ATPase subunit 6 genes, complete cds; mitochondrial genes for mitochondrial products Length = 842 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 gcctcgccctggccttcccc 415 |||||||||||||||||||| Sbjct: 463 gcctcgccctggccttcccc 482
>ref|XM_393859.2| PREDICTED: Apis mellifera similar to CG32648-PA (LOC410379), mRNA Length = 3306 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 agctcacgctgcgctccttc 371 |||||||||||||||||||| Sbjct: 29 agctcacgctgcgctccttc 10
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccgtcgccgcctccggctgc 397 |||||||||||||||||||| Sbjct: 25924215 ccgtcgccgcctccggctgc 25924234
>ref|XM_396621.2| PREDICTED: Apis mellifera similar to CG5658-PA (LOC413170), mRNA Length = 4257 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 ctcacgctgcgctccttcca 373 |||||||||||||||||||| Sbjct: 2154 ctcacgctgcgctccttcca 2135
>gb|AC011298.7| Homo sapiens BAC clone RP11-118M12 from 2, complete sequence Length = 174221 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 ccggctgcctcgccctggcc 409 |||||||||||||||||||| Sbjct: 24942 ccggctgcctcgccctggcc 24923
>gb|AC124248.6| Homo sapiens chromosome 15, clone CTD-3094K11, complete sequence Length = 142201 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 ccggctgcctcgccctggcc 409 |||||||||||||||||||| Sbjct: 136348 ccggctgcctcgccctggcc 136367
>gb|AC112784.5| Homo sapiens BAC clone RP13-555N8 from 2, complete sequence Length = 196451 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 ccggctgcctcgccctggcc 409 |||||||||||||||||||| Sbjct: 69882 ccggctgcctcgccctggcc 69863
>dbj|AP005509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1003_A09 Length = 150755 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccgtcgccgcctccggctgc 397 |||||||||||||||||||| Sbjct: 110002 ccgtcgccgcctccggctgc 110021
>gb|AC112944.7| Mus musculus chromosome 5, clone RP23-411F8, complete sequence Length = 209174 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 aagtgtatttacatacagca 75 |||||||||||||||||||| Sbjct: 7935 aagtgtatttacatacagca 7954
>dbj|AP003865.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1081_B12 Length = 124741 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccgtcgccgcctccggctgc 397 |||||||||||||||||||| Sbjct: 9092 ccgtcgccgcctccggctgc 9111
>dbj|AK121158.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079L12, full insert sequence Length = 2595 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccgtcgccgcctccggctgc 397 |||||||||||||||||||| Sbjct: 2016 ccgtcgccgcctccggctgc 1997
>gb|AC003004.1|AC003004 Human Chromosome 15 cosmid C36, complete sequence Length = 33550 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 ccggctgcctcgccctggcc 409 |||||||||||||||||||| Sbjct: 27764 ccggctgcctcgccctggcc 27745 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,959,153 Number of Sequences: 3902068 Number of extensions: 2959153 Number of successful extensions: 66364 Number of sequences better than 10.0: 66 Number of HSP's better than 10.0 without gapping: 68 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 65789 Number of HSP's gapped (non-prelim): 570 length of query: 440 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 418 effective length of database: 17,147,199,772 effective search space: 7167529504696 effective search space used: 7167529504696 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)