ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart34g11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_197855.1| Oryza sativa (japonica cultivar-group) putative... 230 3e-57
2dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 230 3e-57
3gb|AC060755.9|AC060755 Oryza sativa chromosome 10 BAC OSJNBa0003... 230 3e-57
4dbj|AK103988.1| Oryza sativa (japonica cultivar-group) cDNA clon... 230 3e-57
5dbj|AK099409.1| Oryza sativa (japonica cultivar-group) cDNA clon... 230 3e-57
6dbj|AK072102.1| Oryza sativa (japonica cultivar-group) cDNA clon... 230 3e-57
7gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 230 3e-57
8ref|NM_197856.1| Oryza sativa (japonica cultivar-group) putative... 74 5e-10
9gb|AE005835.1| Caulobacter crescentus CB15 section 161 of 359 of... 48 0.026
10gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 46 0.10
11gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.41
12gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome 44 0.41
13gb|AC090484.4| Genomic sequence for Oryza sativa, Nipponbare str... 44 0.41
14dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.41
15gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 44 0.41
16ref|XM_427639.1| PREDICTED: Gallus gallus similar to LIM-homeobo... 42 1.6
17emb|AL590423.14| Human DNA sequence from clone RP13-364K23 on ch... 42 1.6
18gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 42 1.6
19emb|CR622973.1| full-length cDNA clone CS0DD001YK14 of Neuroblas... 42 1.6
20emb|CR600468.1| full-length cDNA clone CS0DC011YB16 of Neuroblas... 42 1.6
21gb|AC093240.2| Homo sapiens chromosome 5 clone RP11-103P4, compl... 42 1.6
22gb|CP000264.1| Jannaschia sp. CCS1, complete genome 42 1.6
23ref|NM_001015881.1| Homo sapiens TSC22 domain family, member 3 (... 42 1.6
24gb|AC117455.8| Homo sapiens 3 BAC RP11-307B12 (Roswell Park Canc... 42 1.6
25emb|AJ331385.1|HSA331385 Homo sapiens genomic sequence surroundi... 42 1.6
26ref|XM_465935.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.3
27ref|XM_475072.1| Oryza sativa (japonica cultivar-group), predic... 40 6.3
28gb|AC121297.20| Mus musculus chromosome 1, clone RP23-326H11, co... 40 6.3
29gb|AC104285.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
30ref|XM_417320.1| PREDICTED: Gallus gallus similar to cochlear ot... 40 6.3
31gb|AC123557.4| Mus musculus BAC clone RP23-183P22 from 1, comple... 40 6.3
32ref|XM_504899.1| Yarrowia lipolytica CLIB122, YALI0F02299g predi... 40 6.3
33emb|AL162752.2|NMA1Z2491 Neisseria meningitidis serogroup A stra... 40 6.3
34emb|BX548254.7| Zebrafish DNA sequence from clone CH211-243D12 i... 40 6.3
35gb|AC005865.1| Homo sapiens 12 PAC RPCI5-1063M23 (Roswell Park C... 40 6.3
36gb|AC087441.9| Homo sapiens chromosome 11, clone RP11-438N5, com... 40 6.3
37gb|AC096677.2| Homo sapiens chromosome 1 clone RP11-134G8, compl... 40 6.3
38gb|AC107970.4| Homo sapiens chromosome 11, clone CTD-2238L16, co... 40 6.3
39dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
40dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
41gb|AC079811.6| Homo sapiens BAC clone CTD-2502L6 from 2, complet... 40 6.3
42gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 6.3
43gb|AC010442.7| Homo sapiens chromosome 5 clone CTD-2228K2, compl... 40 6.3
44dbj|AP004861.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
45dbj|AK119471.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
46emb|AJ251973.1|HSA251973 Homo sapiens partial steerin-1 gene 40 6.3
47dbj|AK069395.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
48gb|AC173211.3| Gallus gallus BAC clone CH261-2F13 from chromosom... 40 6.3
49gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 6.3
50gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 6.3
51gb|AC161469.3| Gallus gallus BAC clone CH261-69M17 from chromoso... 40 6.3
52gb|BC040598.1| Homo sapiens cDNA clone IMAGE:5270493 40 6.3
53emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB1... 40 6.3
54gb|AC084818.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
55dbj|AP000903.6| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 6.3 
>ref|NM_197855.1| Oryza sativa (japonica cultivar-group) putative
           carnitine/acylcarnitine translocase (OSJNBa0003O19.8),
           mRNA
          Length = 1105

 Score =  230 bits (116), Expect = 3e-57
 Identities = 245/288 (85%)
 Strand = Plus / Minus

                                                                       
Query: 178 acctcgtaggcgaggaagcaggcgccgttggccgggacgctgcgcgccatggccggcccg 237
           ||||||||||| | |||||||||| ||||||| ||||| ||||||||||||||||| |||
Sbjct: 929 acctcgtaggccaagaagcaggcggcgttggcggggacactgcgcgccatggccgggccg 870

                                                                       
Query: 238 aaccccctgtacagacccctggccccgtcggcggcgaggatcttcttgaacgcgtccatg 297
           || ||| |||| || ||| || | ||||||||||||||||||||| |||| |||||||||
Sbjct: 869 aagcccttgtagaggcccttgacgccgtcggcggcgaggatcttcctgaaggcgtccatg 810

                                                                       
Query: 298 gagcccgagtactttgggttcttgaagtcgtccacctggagcacgctcttgaccacgtcg 357
           ||||| |||||||| ||||||||| |||||||||||||||  |||||||| |||||||| 
Sbjct: 809 gagccggagtacttggggttcttgtagtcgtccacctggatgacgctcttcaccacgtcc 750

                                                                       
Query: 358 gtcgggtacacggacccccagaacgccgcgccggcgaccccgcccgcgaggatcagggag 417
           ||||||||||| ||||||||||| |  ||||||||||  || || || |  | ||| || 
Sbjct: 749 gtcgggtacaccgacccccagaaggaggcgccggcgaggcccccggccaccaccagcgac 690

                                                           
Query: 418 cccctgcccagccctgacgtgtcctgcccgccggccatgtactgcttg 465
           ||||  ||||||   |||||||||||||||||||| | ||||||||||
Sbjct: 689 ccccgccccagcgacgacgtgtcctgcccgccggcgaggtactgcttg 642
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  230 bits (116), Expect = 3e-57
 Identities = 245/288 (85%)
 Strand = Plus / Plus

                                                                            
Query: 178      acctcgtaggcgaggaagcaggcgccgttggccgggacgctgcgcgccatggccggcccg 237
                ||||||||||| | |||||||||| ||||||| ||||| ||||||||||||||||| |||
Sbjct: 22255157 acctcgtaggccaagaagcaggcggcgttggcggggacactgcgcgccatggccgggccg 22255216

                                                                            
Query: 238      aaccccctgtacagacccctggccccgtcggcggcgaggatcttcttgaacgcgtccatg 297
                || ||| |||| || ||| || | ||||||||||||||||||||| |||| |||||||||
Sbjct: 22255217 aagcccttgtagaggcccttgacgccgtcggcggcgaggatcttcctgaaggcgtccatg 22255276

                                                                            
Query: 298      gagcccgagtactttgggttcttgaagtcgtccacctggagcacgctcttgaccacgtcg 357
                ||||| |||||||| ||||||||| |||||||||||||||  |||||||| |||||||| 
Sbjct: 22255277 gagccggagtacttggggttcttgtagtcgtccacctggatgacgctcttcaccacgtcc 22255336

                                                                            
Query: 358      gtcgggtacacggacccccagaacgccgcgccggcgaccccgcccgcgaggatcagggag 417
                ||||||||||| ||||||||||| |  ||||||||||  || || || |  | ||| || 
Sbjct: 22255337 gtcgggtacaccgacccccagaaggaggcgccggcgaggcccccggccaccaccagcgac 22255396

                                                                
Query: 418      cccctgcccagccctgacgtgtcctgcccgccggccatgtactgcttg 465
                ||||  ||||||   |||||||||||||||||||| | ||||||||||
Sbjct: 22255397 ccccgccccagcgacgacgtgtcctgcccgccggcgaggtactgcttg 22255444



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 130/161 (80%)
 Strand = Plus / Plus

                                                                            
Query: 205      ttggccgggacgctgcgcgccatggccggcccgaaccccctgtacagacccctggccccg 264
                ||||||||||| || || |||||||| || || |||||| ||||||  ||| |  | || 
Sbjct: 22257922 ttggccgggacactacgagccatggcaggtccaaaccccttgtacaagcccttcactcca 22257981

                                                                            
Query: 265      tcggcggcgaggatcttcttgaacgcgtccatggagcccgagtactttgggttcttgaag 324
                ||||| ||||| ||||||||||| ||||| |  || || |||||| |||| |||||| ||
Sbjct: 22257982 tcggccgcgagaatcttcttgaaagcgtcgactgaccctgagtaccttggcttcttgtag 22258041

                                                         
Query: 325      tcgtccacctggagcacgctcttgaccacgtcggtcgggta 365
                || |||||||| | ||||||||| || |||||||| |||||
Sbjct: 22258042 tcatccacctgaatcacgctcttcacgacgtcggtagggta 22258082
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>gb|AC060755.9|AC060755 Oryza sativa chromosome 10 BAC OSJNBa0003O19 genomic sequence, complete
             sequence
          Length = 172427

 Score =  230 bits (116), Expect = 3e-57
 Identities = 245/288 (85%)
 Strand = Plus / Plus

                                                                         
Query: 178   acctcgtaggcgaggaagcaggcgccgttggccgggacgctgcgcgccatggccggcccg 237
             ||||||||||| | |||||||||| ||||||| ||||| ||||||||||||||||| |||
Sbjct: 72400 acctcgtaggccaagaagcaggcggcgttggcggggacactgcgcgccatggccgggccg 72459

                                                                         
Query: 238   aaccccctgtacagacccctggccccgtcggcggcgaggatcttcttgaacgcgtccatg 297
             || ||| |||| || ||| || | ||||||||||||||||||||| |||| |||||||||
Sbjct: 72460 aagcccttgtagaggcccttgacgccgtcggcggcgaggatcttcctgaaggcgtccatg 72519

                                                                         
Query: 298   gagcccgagtactttgggttcttgaagtcgtccacctggagcacgctcttgaccacgtcg 357
             ||||| |||||||| ||||||||| |||||||||||||||  |||||||| |||||||| 
Sbjct: 72520 gagccggagtacttggggttcttgtagtcgtccacctggatgacgctcttcaccacgtcc 72579

                                                                         
Query: 358   gtcgggtacacggacccccagaacgccgcgccggcgaccccgcccgcgaggatcagggag 417
             ||||||||||| ||||||||||| |  ||||||||||  || || || |  | ||| || 
Sbjct: 72580 gtcgggtacaccgacccccagaaggaggcgccggcgaggcccccggccaccaccagcgac 72639

                                                             
Query: 418   cccctgcccagccctgacgtgtcctgcccgccggccatgtactgcttg 465
             ||||  ||||||   |||||||||||||||||||| | ||||||||||
Sbjct: 72640 ccccgccccagcgacgacgtgtcctgcccgccggcgaggtactgcttg 72687



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 130/161 (80%)
 Strand = Plus / Plus

                                                                         
Query: 205   ttggccgggacgctgcgcgccatggccggcccgaaccccctgtacagacccctggccccg 264
             ||||||||||| || || |||||||| || || |||||| ||||||  ||| |  | || 
Sbjct: 75165 ttggccgggacactacgagccatggcaggtccaaaccccttgtacaagcccttcactcca 75224

                                                                         
Query: 265   tcggcggcgaggatcttcttgaacgcgtccatggagcccgagtactttgggttcttgaag 324
             ||||| ||||| ||||||||||| ||||| |  || || |||||| |||| |||||| ||
Sbjct: 75225 tcggccgcgagaatcttcttgaaagcgtcgactgaccctgagtaccttggcttcttgtag 75284

                                                      
Query: 325   tcgtccacctggagcacgctcttgaccacgtcggtcgggta 365
             || |||||||| | ||||||||| || |||||||| |||||
Sbjct: 75285 tcatccacctgaatcacgctcttcacgacgtcggtagggta 75325
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>dbj|AK103988.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-A08, full
            insert sequence
          Length = 1209

 Score =  230 bits (116), Expect = 3e-57
 Identities = 245/288 (85%)
 Strand = Plus / Minus

                                                                        
Query: 178  acctcgtaggcgaggaagcaggcgccgttggccgggacgctgcgcgccatggccggcccg 237
            ||||||||||| | |||||||||| ||||||| ||||| ||||||||||||||||| |||
Sbjct: 1033 acctcgtaggccaagaagcaggcggcgttggcggggacactgcgcgccatggccgggccg 974

                                                                        
Query: 238  aaccccctgtacagacccctggccccgtcggcggcgaggatcttcttgaacgcgtccatg 297
            || ||| |||| || ||| || | ||||||||||||||||||||| |||| |||||||||
Sbjct: 973  aagcccttgtagaggcccttgacgccgtcggcggcgaggatcttcctgaaggcgtccatg 914

                                                                        
Query: 298  gagcccgagtactttgggttcttgaagtcgtccacctggagcacgctcttgaccacgtcg 357
            ||||| |||||||| ||||||||| |||||||||||||||  |||||||| |||||||| 
Sbjct: 913  gagccggagtacttggggttcttgtagtcgtccacctggatgacgctcttcaccacgtcc 854

                                                                        
Query: 358  gtcgggtacacggacccccagaacgccgcgccggcgaccccgcccgcgaggatcagggag 417
            ||||||||||| ||||||||||| |  ||||||||||  || || || |  | ||| || 
Sbjct: 853  gtcgggtacaccgacccccagaaggaggcgccggcgaggcccccggccaccaccagcgac 794

                                                            
Query: 418  cccctgcccagccctgacgtgtcctgcccgccggccatgtactgcttg 465
            ||||  ||||||   |||||||||||||||||||| | ||||||||||
Sbjct: 793  ccccgccccagcgacgacgtgtcctgcccgccggcgaggtactgcttg 746
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>dbj|AK099409.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013003D17, full
            insert sequence
          Length = 1230

 Score =  230 bits (116), Expect = 3e-57
 Identities = 245/288 (85%)
 Strand = Plus / Minus

                                                                        
Query: 178  acctcgtaggcgaggaagcaggcgccgttggccgggacgctgcgcgccatggccggcccg 237
            ||||||||||| | |||||||||| ||||||| ||||| ||||||||||||||||| |||
Sbjct: 1052 acctcgtaggccaagaagcaggcggcgttggcggggacactgcgcgccatggccgggccg 993

                                                                        
Query: 238  aaccccctgtacagacccctggccccgtcggcggcgaggatcttcttgaacgcgtccatg 297
            || ||| |||| || ||| || | ||||||||||||||||||||| |||| |||||||||
Sbjct: 992  aagcccttgtagaggcccttgacgccgtcggcggcgaggatcttcctgaaggcgtccatg 933

                                                                        
Query: 298  gagcccgagtactttgggttcttgaagtcgtccacctggagcacgctcttgaccacgtcg 357
            ||||| |||||||| ||||||||| |||||||||||||||  |||||||| |||||||| 
Sbjct: 932  gagccggagtacttggggttcttgtagtcgtccacctggatgacgctcttcaccacgtcc 873

                                                                        
Query: 358  gtcgggtacacggacccccagaacgccgcgccggcgaccccgcccgcgaggatcagggag 417
            ||||||||||| ||||||||||| |  ||||||||||  || || || |  | ||| || 
Sbjct: 872  gtcgggtacaccgacccccagaaggaggcgccggcgaggcccccggccaccaccagcgac 813

                                                            
Query: 418  cccctgcccagccctgacgtgtcctgcccgccggccatgtactgcttg 465
            ||||  ||||||   |||||||||||||||||||| | ||||||||||
Sbjct: 812  ccccgccccagcgacgacgtgtcctgcccgccggcgaggtactgcttg 765
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>dbj|AK072102.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013114C17, full
            insert sequence
          Length = 1230

 Score =  230 bits (116), Expect = 3e-57
 Identities = 245/288 (85%)
 Strand = Plus / Minus

                                                                        
Query: 178  acctcgtaggcgaggaagcaggcgccgttggccgggacgctgcgcgccatggccggcccg 237
            ||||||||||| | |||||||||| ||||||| ||||| ||||||||||||||||| |||
Sbjct: 1052 acctcgtaggccaagaagcaggcggcgttggcggggacactgcgcgccatggccgggccg 993

                                                                        
Query: 238  aaccccctgtacagacccctggccccgtcggcggcgaggatcttcttgaacgcgtccatg 297
            || ||| |||| || ||| || | ||||||||||||||||||||| |||| |||||||||
Sbjct: 992  aagcccttgtagaggcccttgacgccgtcggcggcgaggatcttcctgaaggcgtccatg 933

                                                                        
Query: 298  gagcccgagtactttgggttcttgaagtcgtccacctggagcacgctcttgaccacgtcg 357
            ||||| |||||||| ||||||||| |||||||||||||||  |||||||| |||||||| 
Sbjct: 932  gagccggagtacttggggttcttgtagtcgtccacctggatgacgctcttcaccacgtcc 873

                                                                        
Query: 358  gtcgggtacacggacccccagaacgccgcgccggcgaccccgcccgcgaggatcagggag 417
            ||||||||||| ||||||||||| |  ||||||||||  || || || |  | ||| || 
Sbjct: 872  gtcgggtacaccgacccccagaaggaggcgccggcgaggcccccggccaccaccagcgac 813

                                                            
Query: 418  cccctgcccagccctgacgtgtcctgcccgccggccatgtactgcttg 465
            ||||  ||||||   |||||||||||||||||||| | ||||||||||
Sbjct: 812  ccccgccccagcgacgacgtgtcctgcccgccggcgaggtactgcttg 765
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  230 bits (116), Expect = 3e-57
 Identities = 245/288 (85%)
 Strand = Plus / Plus

                                                                            
Query: 178      acctcgtaggcgaggaagcaggcgccgttggccgggacgctgcgcgccatggccggcccg 237
                ||||||||||| | |||||||||| ||||||| ||||| ||||||||||||||||| |||
Sbjct: 22267225 acctcgtaggccaagaagcaggcggcgttggcggggacactgcgcgccatggccgggccg 22267284

                                                                            
Query: 238      aaccccctgtacagacccctggccccgtcggcggcgaggatcttcttgaacgcgtccatg 297
                || ||| |||| || ||| || | ||||||||||||||||||||| |||| |||||||||
Sbjct: 22267285 aagcccttgtagaggcccttgacgccgtcggcggcgaggatcttcctgaaggcgtccatg 22267344

                                                                            
Query: 298      gagcccgagtactttgggttcttgaagtcgtccacctggagcacgctcttgaccacgtcg 357
                ||||| |||||||| ||||||||| |||||||||||||||  |||||||| |||||||| 
Sbjct: 22267345 gagccggagtacttggggttcttgtagtcgtccacctggatgacgctcttcaccacgtcc 22267404

                                                                            
Query: 358      gtcgggtacacggacccccagaacgccgcgccggcgaccccgcccgcgaggatcagggag 417
                ||||||||||| ||||||||||| |  ||||||||||  || || || |  | ||| || 
Sbjct: 22267405 gtcgggtacaccgacccccagaaggaggcgccggcgaggcccccggccaccaccagcgac 22267464

                                                                
Query: 418      cccctgcccagccctgacgtgtcctgcccgccggccatgtactgcttg 465
                ||||  ||||||   |||||||||||||||||||| | ||||||||||
Sbjct: 22267465 ccccgccccagcgacgacgtgtcctgcccgccggcgaggtactgcttg 22267512



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 130/161 (80%)
 Strand = Plus / Plus

                                                                            
Query: 205      ttggccgggacgctgcgcgccatggccggcccgaaccccctgtacagacccctggccccg 264
                ||||||||||| || || |||||||| || || |||||| ||||||  ||| |  | || 
Sbjct: 22269990 ttggccgggacactacgagccatggcaggtccaaaccccttgtacaagcccttcactcca 22270049

                                                                            
Query: 265      tcggcggcgaggatcttcttgaacgcgtccatggagcccgagtactttgggttcttgaag 324
                ||||| ||||| ||||||||||| ||||| |  || || |||||| |||| |||||| ||
Sbjct: 22270050 tcggccgcgagaatcttcttgaaagcgtcgactgaccctgagtaccttggcttcttgtag 22270109

                                                         
Query: 325      tcgtccacctggagcacgctcttgaccacgtcggtcgggta 365
                || |||||||| | ||||||||| || |||||||| |||||
Sbjct: 22270110 tcatccacctgaatcacgctcttcacgacgtcggtagggta 22270150
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>ref|NM_197856.1| Oryza sativa (japonica cultivar-group) putative
           carnitine/acylcarnitine translocase (OSJNBa0003O19.7),
           mRNA
          Length = 1580

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 130/161 (80%)
 Strand = Plus / Minus

                                                                       
Query: 205 ttggccgggacgctgcgcgccatggccggcccgaaccccctgtacagacccctggccccg 264
           ||||||||||| || || |||||||| || || |||||| ||||||  ||| |  | || 
Sbjct: 920 ttggccgggacactacgagccatggcaggtccaaaccccttgtacaagcccttcactcca 861

                                                                       
Query: 265 tcggcggcgaggatcttcttgaacgcgtccatggagcccgagtactttgggttcttgaag 324
           ||||| ||||| ||||||||||| ||||| |  || || |||||| |||| |||||| ||
Sbjct: 860 tcggccgcgagaatcttcttgaaagcgtcgactgaccctgagtaccttggcttcttgtag 801

                                                    
Query: 325 tcgtccacctggagcacgctcttgaccacgtcggtcgggta 365
           || |||||||| | ||||||||| || |||||||| |||||
Sbjct: 800 tcatccacctgaatcacgctcttcacgacgtcggtagggta 760
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>gb|AE005835.1| Caulobacter crescentus CB15 section 161 of 359 of the complete genome
          Length = 10301

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 203  cgttggccgggacgctgcgcgccatggc 230
            ||||||||| ||||||||||||||||||
Sbjct: 1715 cgttggccgagacgctgcgcgccatggc 1742
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>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 383    ccgcgccggcgaccccgcccgcg 405
              |||||||||||||||||||||||
Sbjct: 994706 ccgcgccggcgaccccgcccgcg 994684



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 386    cgccggcgaccccgcccgcg 405
              ||||||||||||||||||||
Sbjct: 479050 cgccggcgaccccgcccgcg 479031
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                 
Query: 262     ccgtcggcggcgaggatcttcttgaacgcgtcca 295
               |||||||||  ||||||||||||||| |||||||
Sbjct: 3996924 ccgtcggcgaggaggatcttcttgaaggcgtcca 3996891
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>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome
          Length = 2932766

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 260     ccccgtcggcggcgaggatcttcttg 285
               |||||| |||||||||||||||||||
Sbjct: 1216678 ccccgtaggcggcgaggatcttcttg 1216653
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>gb|AC090484.4| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0061L19, from chromosome 3, complete sequence
          Length = 153322

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                
Query: 262    ccgtcggcggcgaggatcttcttgaacgcgtcca 295
              |||||||||  ||||||||||||||| |||||||
Sbjct: 102444 ccgtcggcgaggaggatcttcttgaaggcgtcca 102477
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                 
Query: 262     ccgtcggcggcgaggatcttcttgaacgcgtcca 295
               |||||||||  ||||||||||||||| |||||||
Sbjct: 3997035 ccgtcggcgaggaggatcttcttgaaggcgtcca 3997002
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 378     gaacgccgcgccggcgaccccgcccgcgag 407
               |||||||||||| ||||| |||||||||||
Sbjct: 3024778 gaacgccgcgcccgcgacaccgcccgcgag 3024807
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>ref|XM_427639.1| PREDICTED: Gallus gallus similar to LIM-homeobox protein
           (LOC430081), partial mRNA
          Length = 371

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 213 gacgctgcgcgccatggccgg 233
           |||||||||||||||||||||
Sbjct: 245 gacgctgcgcgccatggccgg 265
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>emb|AL590423.14| Human DNA sequence from clone RP13-364K23 on chromosome Xq22.1-23
            Contains the DSIPI gene for delta sleep inducing peptide,
            immunoreactor (DIP, GILZ, TSC-22R), the 5' end of a novel
            gene and two CpG islands, complete sequence
          Length = 83167

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 418  cccctgcccagccctgacgtgtcctgcccgccg 450
            |||||||||||||||| |  |||||||||||||
Sbjct: 5870 cccctgcccagccctgtctggtcctgcccgccg 5902
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 379     aacgccgcgccggcgaccccgcccgcgag 407
               ||||||||| | |||||||||||||||||
Sbjct: 2082158 aacgccgcggcagcgaccccgcccgcgag 2082186
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>emb|CR622973.1| full-length cDNA clone CS0DD001YK14 of Neuroblastoma Cot
           50-normalized of Homo sapiens (human)
          Length = 1702

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 418 cccctgcccagccctgacgtgtcctgcccgccg 450
           |||||||||||||||| |  |||||||||||||
Sbjct: 77  cccctgcccagccctgtctggtcctgcccgccg 45
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>emb|CR600468.1| full-length cDNA clone CS0DC011YB16 of Neuroblastoma Cot
           25-normalized of Homo sapiens (human)
          Length = 1692

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 418 cccctgcccagccctgacgtgtcctgcccgccg 450
           |||||||||||||||| |  |||||||||||||
Sbjct: 53  cccctgcccagccctgtctggtcctgcccgccg 21
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>gb|AC093240.2| Homo sapiens chromosome 5 clone RP11-103P4, complete sequence
          Length = 163673

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 71    gataactgaatcatcagggtg 91
             |||||||||||||||||||||
Sbjct: 74480 gataactgaatcatcagggtg 74500
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>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 218     tgcgcgccatggccggcccgaaccc 242
               |||||||||||||||||| ||||||
Sbjct: 4076902 tgcgcgccatggccggcctgaaccc 4076926
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>ref|NM_001015881.1| Homo sapiens TSC22 domain family, member 3 (TSC22D3), transcript
           variant 3, mRNA
          Length = 1781

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 418 cccctgcccagccctgacgtgtcctgcccgccg 450
           |||||||||||||||| |  |||||||||||||
Sbjct: 84  cccctgcccagccctgtctggtcctgcccgccg 52
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>gb|AC117455.8| Homo sapiens 3 BAC RP11-307B12 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 73181

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 84    tcagggtggaggaacaataac 104
             |||||||||||||||||||||
Sbjct: 34948 tcagggtggaggaacaataac 34968
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>emb|AJ331385.1|HSA331385 Homo sapiens genomic sequence surrounding NotI site, clone
           NL6-AJ14RS
          Length = 775

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 418 cccctgcccagccctgacgtgtcctgcccgccg 450
           |||||||||||||||| |  |||||||||||||
Sbjct: 64  cccctgcccagccctgtctggtcctgcccgccg 32
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>ref|XM_465935.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1310

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 357 ggtcgggtacacggacccccagaa 380
           ||||||||||||||| ||||||||
Sbjct: 569 ggtcgggtacacggatccccagaa 546
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>ref|XM_475072.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1314

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 386 cgccggcgaccccgcccgcg 405
           ||||||||||||||||||||
Sbjct: 42  cgccggcgaccccgcccgcg 61
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>gb|AC121297.20| Mus musculus chromosome 1, clone RP23-326H11, complete sequence
          Length = 207496

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 412   agggagcccctgcccagccc 431
             ||||||||||||||||||||
Sbjct: 47338 agggagcccctgcccagccc 47357
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>gb|AC104285.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0035J08, complete sequence
          Length = 117555

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 386   cgccggcgaccccgcccgcg 405
             ||||||||||||||||||||
Sbjct: 35641 cgccggcgaccccgcccgcg 35660
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>ref|XM_417320.1| PREDICTED: Gallus gallus similar to cochlear otoferlin (LOC419135),
           mRNA
          Length = 9587

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 414 ggagcccctgcccagccctg 433
           ||||||||||||||||||||
Sbjct: 807 ggagcccctgcccagccctg 788
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>gb|AC123557.4| Mus musculus BAC clone RP23-183P22 from 1, complete sequence
          Length = 198349

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 80    atcatcagggtggaggaaca 99
             ||||||||||||||||||||
Sbjct: 16744 atcatcagggtggaggaaca 16725
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>ref|XM_504899.1| Yarrowia lipolytica CLIB122, YALI0F02299g predicted mRNA
          Length = 2457

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 362  ggtacacggacccccagaac 381
            ||||||||||||||||||||
Sbjct: 1388 ggtacacggacccccagaac 1407
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>emb|AL162752.2|NMA1Z2491 Neisseria meningitidis serogroup A strain Z2491 complete genome;
             segment 1/7
          Length = 340806

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 382   gccgcgccggcgaccccgcc 401
             ||||||||||||||||||||
Sbjct: 72387 gccgcgccggcgaccccgcc 72406
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>emb|BX548254.7| Zebrafish DNA sequence from clone CH211-243D12 in linkage group 16,
             complete sequence
          Length = 149138

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 130   cagaaaccagcagcctgcttgctg 153
             |||||||||||||||| |||||||
Sbjct: 19438 cagaaaccagcagccttcttgctg 19461
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>gb|AC005865.1| Homo sapiens 12 PAC RPCI5-1063M23 (Roswell Park Cancer Institute Human
             PAC Library) complete sequence
          Length = 112911

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 108   gtcaagaatggcgatggatg 127
             ||||||||||||||||||||
Sbjct: 98035 gtcaagaatggcgatggatg 98054
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>gb|AC087441.9| Homo sapiens chromosome 11, clone RP11-438N5, complete sequence
          Length = 151606

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 136   ccagcagcctgcttgctggt 155
             ||||||||||||||||||||
Sbjct: 53566 ccagcagcctgcttgctggt 53585
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>gb|AC096677.2| Homo sapiens chromosome 1 clone RP11-134G8, complete sequence
          Length = 223735

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 410    tcagggagcccctgcccagccctg 433
              ||||||||||||||||| ||||||
Sbjct: 171454 tcagggagcccctgccctgccctg 171477
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>gb|AC107970.4| Homo sapiens chromosome 11, clone CTD-2238L16, complete sequence
          Length = 155365

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 136   ccagcagcctgcttgctggt 155
             ||||||||||||||||||||
Sbjct: 26881 ccagcagcctgcttgctggt 26900
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 386    cgccggcgaccccgcccgcg 405
              ||||||||||||||||||||
Sbjct: 260121 cgccggcgaccccgcccgcg 260140
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 357      ggtcgggtacacggacccccagaa 380
                ||||||||||||||| ||||||||
Sbjct: 18407725 ggtcgggtacacggatccccagaa 18407702
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>gb|AC079811.6| Homo sapiens BAC clone CTD-2502L6 from 2, complete sequence
          Length = 130618

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 47   cagaggcaggactgtccaaa 66
            ||||||||||||||||||||
Sbjct: 8068 cagaggcaggactgtccaaa 8049
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 386     cgccggcgaccccgcccgcg 405
               ||||||||||||||||||||
Sbjct: 4179207 cgccggcgaccccgcccgcg 4179188
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>gb|AC010442.7| Homo sapiens chromosome 5 clone CTD-2228K2, complete sequence
          Length = 153197

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 410   tcagggagcccctgcccagc 429
             ||||||||||||||||||||
Sbjct: 96946 tcagggagcccctgcccagc 96965
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>dbj|AP004861.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0001A11
          Length = 153252

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 357   ggtcgggtacacggacccccagaa 380
             ||||||||||||||| ||||||||
Sbjct: 70649 ggtcgggtacacggatccccagaa 70626
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>dbj|AK119471.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-A10, full
           insert sequence
          Length = 1310

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 357 ggtcgggtacacggacccccagaa 380
           ||||||||||||||| ||||||||
Sbjct: 569 ggtcgggtacacggatccccagaa 546
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>emb|AJ251973.1|HSA251973 Homo sapiens partial steerin-1 gene
          Length = 200033

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 410  tcagggagcccctgcccagccctg 433
            ||||||||||||||||| ||||||
Sbjct: 9703 tcagggagcccctgccctgccctg 9726
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>dbj|AK069395.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023011N07, full
           insert sequence
          Length = 1670

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 386 cgccggcgaccccgcccgcg 405
           ||||||||||||||||||||
Sbjct: 76  cgccggcgaccccgcccgcg 95
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>gb|AC173211.3| Gallus gallus BAC clone CH261-2F13 from chromosome ul, complete sequence
          Length = 204791

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 414    ggagcccctgcccagccctg 433
              ||||||||||||||||||||
Sbjct: 102568 ggagcccctgcccagccctg 102587
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 382     gccgcgccggcgaccccgcccgcg 405
               |||||||||||| |||||||||||
Sbjct: 1445375 gccgcgccggcggccccgcccgcg 1445352
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 191     ggaagcaggcgccgttggccggga 214
               |||||||||||||| |||||||||
Sbjct: 3369013 ggaagcaggcgccgctggccggga 3369036
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>gb|AC161469.3| Gallus gallus BAC clone CH261-69M17 from chromosome ul, complete
            sequence
          Length = 186443

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 414  ggagcccctgcccagccctg 433
            ||||||||||||||||||||
Sbjct: 6283 ggagcccctgcccagccctg 6264
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>gb|BC040598.1| Homo sapiens cDNA clone IMAGE:5270493
          Length = 2400

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 47   cagaggcaggactgtccaaa 66
            ||||||||||||||||||||
Sbjct: 1546 cagaggcaggactgtccaaa 1565
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>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 362    ggtacacggacccccagaac 381
              ||||||||||||||||||||
Sbjct: 351144 ggtacacggacccccagaac 351125
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>gb|AC084818.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0668H12,
              complete sequence
          Length = 160603

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 386    cgccggcgaccccgcccgcg 405
              ||||||||||||||||||||
Sbjct: 142305 cgccggcgaccccgcccgcg 142324
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>dbj|AP000903.6| Homo sapiens genomic DNA, chromosome 11q clone:RP11-700I2, complete
             sequence
          Length = 119082

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 313   gggttcttgaagtcgtccac 332
             ||||||||||||||||||||
Sbjct: 74176 gggttcttgaagtcgtccac 74195


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,619,407
Number of Sequences: 3902068
Number of extensions: 3619407
Number of successful extensions: 71474
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70514
Number of HSP's gapped (non-prelim): 956
length of query: 469
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 447
effective length of database: 17,147,199,772
effective search space: 7664798298084
effective search space used: 7664798298084
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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