ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart34g09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DIC_HUMAN (Q9UBX3) Mitochondrial dicarboxylate carrier (Solute c... 35 0.12
2OAC1_YEAST (P32332) Mitochondrial oxaloacetate transport protein... 33 0.28
3DIC_MOUSE (Q9QZD8) Mitochondrial dicarboxylate carrier (Solute c... 33 0.36
4M2OM_RAT (P97700) Mitochondrial 2-oxoglutarate/malate carrier pr... 33 0.47
5M2OM_MOUSE (Q9CR62) Mitochondrial 2-oxoglutarate/malate carrier ... 33 0.47
6M2OM_BOVIN (P22292) Mitochondrial 2-oxoglutarate/malate carrier ... 32 0.62
7M2OM_HUMAN (Q02978) Mitochondrial 2-oxoglutarate/malate carrier ... 32 0.80
8COX18_YEAST (P53239) Inner membrane protein COX18, mitochondrial... 29 5.2
9ARGJ_SYNEL (Q8DHN4) Arginine biosynthesis bifunctional protein a... 28 8.9

>DIC_HUMAN (Q9UBX3) Mitochondrial dicarboxylate carrier (Solute carrier family|
           25 member 10)
          Length = 287

 Score = 34.7 bits (78), Expect = 0.12
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = -3

Query: 462 CAMQTMKTGGPFKFYSGFPVYCVRIAPHVMMTWLFL 355
           CA++T K G P  FY G     +R+ PH ++T++FL
Sbjct: 240 CAVETAKLG-PLAFYKGLVPAGIRLIPHTVLTFVFL 274



to top

>OAC1_YEAST (P32332) Mitochondrial oxaloacetate transport protein|
           (Mitochondrial carrier protein PMT)
          Length = 324

 Score = 33.5 bits (75), Expect = 0.28
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -3

Query: 465 DCAMQTMKTGGPFKFYSGFPVYCVRIAPHVMMTWLFL 355
           DC ++T++  G    Y GF     RIAPH +M   F+
Sbjct: 270 DCLVKTVRIEGVTALYKGFAAQVFRIAPHTIMCLTFM 306



to top

>DIC_MOUSE (Q9QZD8) Mitochondrial dicarboxylate carrier (Solute carrier family|
           25 member 10)
          Length = 287

 Score = 33.1 bits (74), Expect = 0.36
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = -3

Query: 462 CAMQTMKTGGPFKFYSGFPVYCVRIAPHVMMTWLFL 355
           CAM+T K G P  F+ G     +R+ PH ++T++FL
Sbjct: 239 CAMETAKLG-PQAFFKGLFPAGIRLIPHTVLTFMFL 273



to top

>M2OM_RAT (P97700) Mitochondrial 2-oxoglutarate/malate carrier protein (OGCP)|
           (Solute carrier family 25 member 11)
          Length = 313

 Score = 32.7 bits (73), Expect = 0.47
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = -3

Query: 465 DCAMQTMKTGGPFKFYSGFPVYCVRIAPHVMMTWLFL 355
           D  ++ ++  G F  + GF  Y  R+ PH ++T++FL
Sbjct: 263 DVLLKVVRYEGFFSLWKGFTPYYARLGPHTVLTFIFL 299



to top

>M2OM_MOUSE (Q9CR62) Mitochondrial 2-oxoglutarate/malate carrier protein (OGCP)|
           (Solute carrier family 25 member 11)
          Length = 313

 Score = 32.7 bits (73), Expect = 0.47
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = -3

Query: 465 DCAMQTMKTGGPFKFYSGFPVYCVRIAPHVMMTWLFL 355
           D  ++ ++  G F  + GF  Y  R+ PH ++T++FL
Sbjct: 263 DVLLKVVRYEGFFSLWKGFTPYYARLGPHTVLTFIFL 299



to top

>M2OM_BOVIN (P22292) Mitochondrial 2-oxoglutarate/malate carrier protein (OGCP)|
           (Solute carrier family 25 member 11)
          Length = 313

 Score = 32.3 bits (72), Expect = 0.62
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = -3

Query: 465 DCAMQTMKTGGPFKFYSGFPVYCVRIAPHVMMTWLFL 355
           D  ++ ++  G F  + GF  Y  R+ PH ++T++FL
Sbjct: 263 DVLVKVVRYEGFFSLWKGFTPYYARLGPHTVLTFIFL 299



to top

>M2OM_HUMAN (Q02978) Mitochondrial 2-oxoglutarate/malate carrier protein (OGCP)|
           (Solute carrier family 25 member 11)
          Length = 313

 Score = 32.0 bits (71), Expect = 0.80
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = -3

Query: 465 DCAMQTMKTGGPFKFYSGFPVYCVRIAPHVMMTWLFL 355
           D   + ++  G F  + GF  Y  R+ PH ++T++FL
Sbjct: 263 DVLFKVVRYEGFFSLWKGFTPYYARLGPHTVLTFIFL 299



to top

>COX18_YEAST (P53239) Inner membrane protein COX18, mitochondrial precursor|
           (Cytochrome c oxidase assembly protein 18)
          Length = 316

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -1

Query: 308 SWRQYQSLLDTFNNFSAALHLPWLFLV 228
           S+  +QS+ DTF     A H+PW+ LV
Sbjct: 34  SFSLFQSVADTFLTVHEASHIPWIVLV 60



to top

>ARGJ_SYNEL (Q8DHN4) Arginine biosynthesis bifunctional protein argJ [Includes:|
           Glutamate N-acetyltransferase (EC 2.3.1.35) (Ornithine
           acetyltransferase) (Ornithine transacetylase) (OATase);
           Amino-acid acetyltransferase (EC 2.3.1.1)
           (N-acetylglutamate syn
          Length = 419

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = +2

Query: 8   KISNGLN*AYTIQDQMAQAAKQVVVSHGCAQPTEVCRQKL 127
           K S   + A  + D  A AA     +H CA P   CRQ+L
Sbjct: 27  KASGAPDLALIVSDVPAIAAGVFTTNHMCAAPVRYCRQRL 66


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,905,154
Number of Sequences: 219361
Number of extensions: 1216170
Number of successful extensions: 3173
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3173
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3014947676
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top