>Y266_MYCPN (P75509) Hypothetical protein MG127 homolog (A65_orf145)|
          Length = 145

 Score = 32.0 bits (71), Expect = 0.79
 Identities = 17/37 (45%), Positives = 23/37 (62%)
 Frame = -2

Query: 273 HTRDEVYAKTAEDKRARDLSSLDDDGAAKSEVSKKAD 163
           +T +  Y K   DKR RD+ SL +DG  +S  SK+AD
Sbjct: 38  YTIENFYKKPISDKRFRDILSLSEDG-TESLFSKRAD 73

>VIT1_FUNHE (Q90508) Vitellogenin-1 precursor (Vitellogenin I) (VTG I) [Contains:|
            Lipovitellin-1 (LV1); Phosvitin (PV); Lipovitellin-2
            (LV2)]
          Length = 1704

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 24/108 (22%), Positives = 52/108 (48%)
 Frame = +2

Query: 2    SKPINSNKTLIQNFRNEKAKTPNVQTPHK*AKLKLRDSTNAAQTPSNEHDHRSQSAFLET 181
            S   +S+ +     R+ ++ + +  +     K+ L   TN++ + S+     S S+   +
Sbjct: 1082 SSSSSSSSSSSSESRSSRSSSSSSSSSRSSRKIDLAARTNSSSSSSSRRSRSSSSSSSSS 1141

Query: 182  SDFAAPSSSSEDRSLARLSSAVFAYTSSRVWKYFSNARGRNLGIRKTN 325
            S  ++ SSSS  RS +  SS+  + +SSR  +  ++ R  +   R ++
Sbjct: 1142 SSSSSSSSSSSRRSSSSSSSS--SSSSSRSSRRVNSTRSSSSSSRTSS 1187

>ERFB_EMENI (Q5B3W7) Palmitoyltransferase erf2 (EC 2.3.1.-) (DHHC cysteine-rich|
           domain-containing protein erf2) (Ras protein
           acyltransferase)
          Length = 601

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
 Frame = +2

Query: 11  INSNKTLIQNFRNEKAKTPNV-----QTPHK*AKLKLRDSTNAAQTPSNEHDHRSQSAFL 175
           I+SN +   N    ++++ N+     + PH   K+  +  TN  +TP      RS  +FL
Sbjct: 177 IHSNASPTANTTTVRSESANLIRDRERPPHLNLKVDYK-GTNENETPE-----RSPLSFL 230

Query: 176 ETSDFAAPSSSSEDRSLARLSSA 244
              +  AP+ + + R+ ARLSSA
Sbjct: 231 SLQNRNAPADNRDSRAHARLSSA 253

>YEN1_SCHPO (O13695) Hypothetical serine-rich protein C11G7.01 in chromosome I|
          Length = 536

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 19/54 (35%), Positives = 31/54 (57%)
 Frame = +2

Query: 104 LRDSTNAAQTPSNEHDHRSQSAFLETSDFAAPSSSSEDRSLARLSSAVFAYTSS 265
           L  S++   + S+     S SA L +S  A+P+SSS   +L+  SS++ A +SS
Sbjct: 83  LVSSSSQQSSSSSASLTSSSSATLTSSSSASPTSSSSSHALSSSSSSLVASSSS 136

>Y127_MYCGE (P47373) Hypothetical protein MG127|
          Length = 145

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = -2

Query: 282 KYFHTRDEVYAKTAEDKRARDLSSLDDDGAAKSEVSKKAD 163
           K  +  +  Y K   DKR +D+ SL +DG  +S  SK+AD
Sbjct: 36  KISYVVENFYKKPISDKRFKDILSLSEDG-TESLFSKRAD 74

>KPSH1_PINFU (Q4KTY1) Serine/threonine-protein kinase H1 homolog (EC 2.7.11.1)|
          Length = 415

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
 Frame = +2

Query: 14  NSNKTLIQNFRNEKAKTPNVQTPH--K*AKLKLRDSTNAAQTPSNEHDHRSQSAFLETSD 187
           + N+ +++ F NE+ K  N Q PH  +  +   +D  NA   P  +  +R    + +  D
Sbjct: 14  SGNQAVVEVFNNERNKEYNRQNPHQNRGPRDPTKDPKNAGPPPEGQRSNRKVKKYRDKFD 73

>ATRX_DROME (Q9GQN5) Transcriptional regulator ATRX homolog (EC 3.6.1.-)|
           (ATP-dependent helicase XNP) (X-linked nuclear protein)
           (dXNP) (d-xnp)
          Length = 1311

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 20/70 (28%), Positives = 30/70 (42%)
 Frame = +2

Query: 8   PINSNKTLIQNFRNEKAKTPNVQTPHK*AKLKLRDSTNAAQTPSNEHDHRSQSAFLETSD 187
           P    + +++  R    KT   Q P K +     DS  AA T       RS+S     SD
Sbjct: 239 PPRPKRCVVRLKRVSLPKTKPAQKPKKMSS----DSEEAATTSKKSRQRRSKSESEADSD 294

Query: 188 FAAPSSSSED 217
           + AP++  E+
Sbjct: 295 YEAPAAEEEE 304

>RRP44_CAEEL (Q17632) Probable exosome complex exonuclease RRP44 (EC 3.1.13.-)|
           (Ribosomal RNA-processing protein 44) (DIS3 protein
           homolog)
          Length = 1029

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = -2

Query: 321 VFLIPKFLPRAFEKYFHTRD-EVYAKTAEDKRARDLSSLDDDGAAKSEVSKK 169
           V L+P+    A EK    RD E Y KTA+D    D  + D++   K++ SKK
Sbjct: 295 VQLLPEDQWTAPEKKIRLRDVEEYVKTADDMGNEDEENDDENDEPKAKKSKK 346

>ATI_CAMPC (Q05482) A-type inclusion protein (ATI)|
          Length = 726

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -2

Query: 273 HTRDEVYAKTAEDKRARDLSSLDDDGAAKSEVSKK 169
           H  + +   T E K  RD+ +  DDG+  SE+ KK
Sbjct: 458 HKTERIDRLTKEIKELRDIQNGTDDGSDSSEIDKK 492

>RGS3_CAEEL (Q18312) Regulator of G protein signaling rgs-3|
          Length = 363

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 26/96 (27%), Positives = 43/96 (44%)
 Frame = +2

Query: 41  FRNEKAKTPNVQTPHK*AKLKLRDSTNAAQTPSNEHDHRSQSAFLETSDFAAPSSSSEDR 220
           +R+ KA+TP +    +   L L DS+ +      +H+ R   +   TS  +AP+S+    
Sbjct: 2   WRSYKAETPELADETQEVDLNLHDSSES------DHEGRQSRSASITSSTSAPASNDVTL 55

Query: 221 SLARLSSAVFAYTSSRVWKYFSNARGRNLGIRKTNR 328
            +   +S+  + T S    YF    G   G  K NR
Sbjct: 56  QVPITNSSATSPTPSTGSMYF--IAGMFDGKEKVNR 89

>PGK_MYCPU (Q98QW4) Phosphoglycerate kinase (EC 2.7.2.3)|
          Length = 771

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
 Frame = +2

Query: 38  NFRNEKAKTPNVQTPHK*AKLKLRDSTNAAQTPSNEHDHRSQSAF--LETSDFAAPSSSS 211
           NF  +  +TPN+QT +          T+  +T + E  +   S F    T +F+ PSS+ 
Sbjct: 645 NFEAQNLETPNLQTSN--------FETSNLETSNFETSNFETSTFESFNTGNFSTPSSTF 696

Query: 212 EDRSL 226
           ED  L
Sbjct: 697 EDLDL 701

>ARSJ_MOUSE (Q8BM89) Arylsulfatase J precursor (EC 3.1.6.-) (ASJ)|
          Length = 598

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -2

Query: 402 PVQHKAWVWFGRYLAVANLVYFSI 331
           P+  +AW W G++LA+  L  FS+
Sbjct: 12  PLSPQAWAWSGKFLAMGALAGFSV 35

>MLH3_HUMAN (Q9UHC1) DNA mismatch repair protein Mlh3 (MutL protein homolog 3)|
          Length = 1453

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 23/93 (24%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
 Frame = +2

Query: 92  AKLKLRDSTNAAQTPSNEHDHRSQSAFLETSDFAAPSSSSEDRSLARLSSAVFAYTSSR- 268
           +K+  +++  A++   NE   +S   FLE S    P  +S +  L+   +      S + 
Sbjct: 468 SKMLEQETIVASEAGENEKHKKS---FLEHSSLENPCGTSLEMFLSPFQTPCHFEESGQD 524

Query: 269 --VWKYFSNARGRNLGIRKTNRLMEK*TRFATA 361
             +WK  +   G    I K NR+  +  RF  A
Sbjct: 525 LEIWKESTTVNGMAANILKNNRIQNQPKRFKDA 557

>SFR17_HUMAN (Q8TF01) Splicing factor, arginine/serine-rich 130|
           (Serine-arginine-rich splicing regulatory protein 130)
           (SRrp130) (SR-rich protein) (SR-related protein)
          Length = 805

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
 Frame = +2

Query: 47  NEKAKTPNVQT-------PHK*AKLKLRDSTNAAQTPSNEHDHRSQSAFLETSDFAAPSS 205
           NEK +TPN  T        HK  + + R  + ++ + S   + R+ S     S  +  SS
Sbjct: 480 NEKKRTPNETTSVLEPKKEHKEKEKQGRSRSGSSSSGSPSSNSRTSSTSSTVSSSSYSSS 539

Query: 206 SSEDRSLARLSS 241
           S   R+ +R SS
Sbjct: 540 SGSSRTSSRSSS 551

>MIA40_CANGA (Q6FW26) Intermembrane space import and assembly protein 40,|
           mitochondrial precursor (Mitochondrial import inner
           membrane translocase TIM40)
          Length = 404

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 11/29 (37%), Positives = 20/29 (68%)
 Frame = -2

Query: 267 RDEVYAKTAEDKRARDLSSLDDDGAAKSE 181
           +DE Y KT ++K+  + +S D+D A+K +
Sbjct: 376 KDEAYLKTEKEKKIEENASPDEDTASKKD 404

>FLIF_BORBU (Q44912) Flagellar M-ring protein|
          Length = 569

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 20/59 (33%), Positives = 31/59 (52%)
 Frame = -2

Query: 375 FGRYLAVANLVYFSINLFVFLIPKFLPRAFEKYFHTRDEVYAKTAEDKRARDLSSLDDD 199
           F  +L +A++V FS+ + VF I   + R  E+    R+E  AK A  +R + L    DD
Sbjct: 469 FKYFLFIASIV-FSLLILVFTIFFAISRELERRRRLREEELAKQAHLRRQQALMDGGDD 526


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,710,986
Number of Sequences: 219361
Number of extensions: 973305
Number of successful extensions: 3552
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3535
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2968155324
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)