>INVA_PHAAU (P29001) Acid beta-fructofuranosidase precursor (EC 3.2.1.26) (Acid|
           sucrose hydrolase) (Acid invertase) (AI) (Vacuolar
           invertase) [Contains: Acid beta-fructofuranosidase 30
           kDa subunit; Acid beta-fructofuranosidase 38 kDa
           subunit]
          Length = 649

 Score = 32.3 bits (72), Expect = 0.29
 Identities = 20/77 (25%), Positives = 33/77 (42%)
 Frame = +1

Query: 25  LVFTGAISSVHHYNLTGGPNGHILSMGINRKVCEQS*TKIQVSAWTTAIRVLTIGSKSMS 204
           L+F  ++ +   Y  +G P+ H+ S   N +   QS T +  S W    R ++ G    S
Sbjct: 31  LLFLSSLVAYGGYRASGVPHAHLSSPTSNHQQDHQSPTSLPSSKWYPVSRGVSSGVSEKS 90

Query: 205 RQINRGSVGA*SATFPF 255
             +     G  S  FP+
Sbjct: 91  SNLLFAGEGGASEAFPW 107

>MDM20_YEAST (Q12387) N-terminal acetyltransferase B complex subunit MDM20 (NatB|
           complex subunit MDM20) (Mitochondrial distribution and
           morphology protein 20) (Dislikes extra CIN8 protein 1)
          Length = 796

 Score = 31.6 bits (70), Expect = 0.49
 Identities = 22/83 (26%), Positives = 38/83 (45%)
 Frame = +3

Query: 126 TKLNEDTSISLDYRNPRSDHRKQINEPSN*PGVCGCLKCNLPFQIDRRELLFHILPGTYR 305
           T  N DTS++L  +N    H K +N P     VC  L   +   +D  EL+ +++   Y+
Sbjct: 220 TFANFDTSVNLYLKNFILKHTKLLNSPQKLFEVCSKL---IEKGLDDYELITNLIDAAYK 276

Query: 306 RITMSIGGFSKVAQWLERRIGSN 374
                     +V QW++  +G +
Sbjct: 277 LSKSK----DEVKQWIDENLGDS 295

>YMN1_YEAST (Q03102) Hypothetical 40.0 kDa protein in COX14-COS3 intergenic|
           region
          Length = 365

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = -2

Query: 374 IASDATLKPLGHFAEAPNAHSYPPICAGEYVEQELSAINLK 252
           +A    LK L    E  N H + P C  E +E+ELS+  LK
Sbjct: 3   LAKQWVLKNLPTPGEPFNFHFHDPACTFELIEKELSSEQLK 43

>SYV_PSEAE (Q9HXH0) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS)
          Length = 950

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -2

Query: 353 KPLGHFAEAPNAHSYPPICAGEYVEQE 273
           K +G FAE P    + PI A EYV++E
Sbjct: 241 KLIGQFAELPIVGRHIPIIADEYVDRE 267

>INVA_PHAVU (O24509) Acid beta-fructofuranosidase precursor (EC 3.2.1.26) (Acid|
           sucrose hydrolase) (Acid invertase) (AI) (Vacuolar
           invertase)
          Length = 651

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 18/77 (23%), Positives = 31/77 (40%)
 Frame = +1

Query: 25  LVFTGAISSVHHYNLTGGPNGHILSMGINRKVCEQS*TKIQVSAWTTAIRVLTIGSKSMS 204
           L+F  ++ +      +  P+ H+ S   N +   QS T +  S W    R ++ G    S
Sbjct: 31  LLFLSSLVAFGRNRASNVPHDHVSSSASNHQQEHQSPTSLPSSKWHAVSRGVSSGVSEKS 90

Query: 205 RQINRGSVGA*SATFPF 255
             +     G  S  FP+
Sbjct: 91  SSMLFSGEGGASEAFPW 107

>RL18_METKA (Q8TZA5) 50S ribosomal protein L18P|
          Length = 202

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -1

Query: 309 SAYMCRGVCGTRALGDQFEREGCTLGTHRP 220
           +AY+   +CG RAL    ER    +G HRP
Sbjct: 85  AAYLTGYLCGLRALERGIERAVIDIGLHRP 114

>KIF4A_CHICK (Q90640) Chromosome-associated kinesin KIF4A (Chromokinesin)|
          Length = 1225

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -1

Query: 297  CRGVCGTRALGDQFEREGCTLG 232
            C+G CG R  G + ++ GCT G
Sbjct: 1086 CKGRCGNRQCGCRKQKVGCTAG 1107

>GGA1_HUMAN (Q9UJY5) ADP-ribosylation factor-binding protein GGA1|
           (Golgi-localized, gamma ear-containing, ARF-binding
           protein 1) (Gamma-adaptin-related protein 1)
          Length = 639

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = -2

Query: 371 ASDATLKPLGHFAEAPNAHSYPPICAGEYVEQELSAINLKGKVAL 237
           +SDAT  P    A+AP+  S PP          L  ++L GK  L
Sbjct: 387 SSDATEPPAPALAQAPSMESRPPAQTSLPASSGLDDLDLLGKTLL 431

>SYV_THEMA (Q9X2D7) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS)
          Length = 865

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -2

Query: 356 LKPLGHFAEAPNAHSYPPICAGEYVEQELSA-INLKGKV 243
           LK LG+  E    +  PP  A  YVE+E+ A ++L G +
Sbjct: 761 LKTLGNIEEVSFVNEKPPKTATAYVEEEIEAYVDLGGLI 799


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,179,701
Number of Sequences: 219361
Number of extensions: 1061471
Number of successful extensions: 1969
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1969
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 1407308304
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)