ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart34f12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1RLA0_ORYSA (P41095) 60S acidic ribosomal protein P0 133 2e-31
2RLA0_MAIZE (O24573) 60S acidic ribosomal protein P0 131 1e-30
3RLA0_SOYBN (P50346) 60S acidic ribosomal protein P0 124 1e-28
4RLA0A_ARATH (O04204) 60S acidic ribosomal protein P0-A 114 2e-25
5RLA0B_ARATH (Q42112) 60S acidic ribosomal protein P0-B 109 4e-24
6RLA0C_ARATH (P57691) 60S acidic ribosomal protein P0-C 109 4e-24
7RLA0_LUPLU (P50345) 60S acidic ribosomal protein P0 91 2e-18
8RLA0_BRARE (Q9PV90) 60S acidic ribosomal protein P0 (L10E) 85 1e-16
9RLA0_CHICK (P47826) 60S acidic ribosomal protein P0 (L10E) 82 6e-16
10RLA0_RANSY (Q9DG68) 60S acidic ribosomal protein P0 (L10E) 82 1e-15
11RLA0_CERCA (Q9U3U0) 60S acidic ribosomal protein P0 (CcP0) 81 1e-15
12RLA0_DROME (P19889) 60S acidic ribosomal protein P0 (DNA-(apurin... 81 2e-15
13RLA0_ICTPU (Q90YX1) 60S acidic ribosomal protein P0 (L10E) 80 3e-15
14RLA0_RAT (P19945) 60S acidic ribosomal protein P0 (L10E) 80 4e-15
15RLA0_HUMAN (P05388) 60S acidic ribosomal protein P0 (L10E) 79 5e-15
16RLA0_BOVIN (Q95140) 60S acidic ribosomal protein P0 (L10E) (Frag... 78 1e-14
17RLA0_MOUSE (P14869) 60S acidic ribosomal protein P0 (L10E) 78 1e-14
18RLA0_CAEEL (Q93572) 60S acidic ribosomal protein P0 74 3e-13
19RLA0_SCHPO (O74864) 60S acidic ribosomal protein P0 69 9e-12
20RLA0_DICDI (P22685) 60S acidic ribosomal protein P0 68 1e-11
21RLA0_YEAST (P05317) 60S acidic ribosomal protein P0 (L10E) 68 1e-11
22RLA0_PLAF8 (Q94660) 60S acidic ribosomal protein P0 68 1e-11
23RLA0_EIMTE (Q967Y7) 60S acidic ribosomal protein P0 67 3e-11
24RLA0_NEUCR (Q96TJ5) 60S acidic ribosomal protein P0 62 6e-10
25RLA0_PODAN (Q9C3Z6) 60S acidic ribosomal protein P0 60 2e-09
26RLA0_CHERU (P29764) 60S acidic ribosomal protein P0 (Light-induc... 52 1e-06
27RLA0_TRYCR (P26796) 60S acidic ribosomal protein P0 50 4e-06
28RLA0_LEICH (P39096) 60S acidic ribosomal protein P0 39 0.007
29RLA0_LEIIN (P39097) 60S acidic ribosomal protein P0 39 0.007
30CHRD_HUMAN (Q9H2X0) Chordin precursor 29 7.7
31AKA12_HUMAN (Q02952) A-kinase anchor protein 12 (A-kinase anchor... 29 7.7
32Y421_METJA (Q57864) Hypothetical protein MJ0421 29 7.7

>RLA0_ORYSA (P41095) 60S acidic ribosomal protein P0|
          Length = 318

 Score =  133 bits (335), Expect = 2e-31
 Identities = 69/107 (64%), Positives = 76/107 (71%)
 Frame = -3

Query: 486 DLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYL 307
           DLM+KFASGVSMVAS+SLAISYPT+AAAPHMFLN YKNVLAVA+ET+YSY HADKIKEYL
Sbjct: 212 DLMEKFASGVSMVASVSLAISYPTIAAAPHMFLNGYKNVLAVAVETEYSYPHADKIKEYL 271

Query: 306 KDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 166
           KDPSKFAV                            SDG++G SLFD
Sbjct: 272 KDPSKFAVAAPVAADSGAAAPSAAKEEEKKEEPEEESDGDLGMSLFD 318



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>RLA0_MAIZE (O24573) 60S acidic ribosomal protein P0|
          Length = 318

 Score =  131 bits (329), Expect = 1e-30
 Identities = 70/108 (64%), Positives = 76/108 (70%)
 Frame = -3

Query: 486 DLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYL 307
           DL++KFA+GVSMVASLSLAISYPT+AA PHMF+N YKNVLAVA+ETDYSY HADKIKEYL
Sbjct: 212 DLIEKFATGVSMVASLSLAISYPTLAAVPHMFINGYKNVLAVAVETDYSYPHADKIKEYL 271

Query: 306 KDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFDD 163
           KDPSKFAV                            SD EMGFSLFDD
Sbjct: 272 KDPSKFAV-AAPVAAGDSGASAAPKEEEKAAEPEEESDEEMGFSLFDD 318



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>RLA0_SOYBN (P50346) 60S acidic ribosomal protein P0|
          Length = 320

 Score =  124 bits (311), Expect = 1e-28
 Identities = 66/108 (61%), Positives = 74/108 (68%), Gaps = 1/108 (0%)
 Frame = -3

Query: 486 DLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYL 307
           DL+ KFA+GVSMV SLSLAISYPT+AAAPHMF+NAYKNVLAVA+ETDYS+  ADK+KEYL
Sbjct: 213 DLIGKFAAGVSMVTSLSLAISYPTLAAAPHMFVNAYKNVLAVAVETDYSFPEADKVKEYL 272

Query: 306 KDPSKFAVXXXXX-XXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 166
           KDPSKFAV                             SD +MGFSLFD
Sbjct: 273 KDPSKFAVAAVAAPAAASGAPAAAAKEEEKKEEPAEESDDDMGFSLFD 320



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>RLA0A_ARATH (O04204) 60S acidic ribosomal protein P0-A|
          Length = 317

 Score =  114 bits (284), Expect = 2e-25
 Identities = 59/106 (55%), Positives = 72/106 (67%)
 Frame = -3

Query: 486 DLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYL 307
           DL++KFA+GVSM+ +LSLAISYPT+AAAPHMFLNAYKNVLAVAL T+YS+  A+ +KE+L
Sbjct: 213 DLVEKFAAGVSMITALSLAISYPTVAAAPHMFLNAYKNVLAVALATEYSFPQAENVKEFL 272

Query: 306 KDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLF 169
           KDP+KFAV                            SDG+MGF LF
Sbjct: 273 KDPTKFAV--AVAAPVSGESGGAVVAVAVEEEAAEESDGDMGFDLF 316



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>RLA0B_ARATH (Q42112) 60S acidic ribosomal protein P0-B|
          Length = 320

 Score =  109 bits (272), Expect = 4e-24
 Identities = 53/107 (49%), Positives = 68/107 (63%)
 Frame = -3

Query: 483 LMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLK 304
           L++KFASG+SMV SL+LA+SYPT+AAAPHMF+NAYKN LA+A+ T+Y++  A+K+KEYLK
Sbjct: 213 LVEKFASGISMVTSLALAVSYPTLAAAPHMFINAYKNALAIAVATEYTFPQAEKVKEYLK 272

Query: 303 DPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFDD 163
           DPSKFAV                             D    F LFD+
Sbjct: 273 DPSKFAVASVAAVSADAGGGAPAAAKVEEKEESDEEDYGGDFGLFDE 319



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>RLA0C_ARATH (P57691) 60S acidic ribosomal protein P0-C|
          Length = 323

 Score =  109 bits (272), Expect = 4e-24
 Identities = 55/110 (50%), Positives = 70/110 (63%), Gaps = 3/110 (2%)
 Frame = -3

Query: 483 LMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLK 304
           L++KFASG+SMV SL+LA+SYPT+AAAPHMF+NAYKN LA+A+ TDY++  A+K+KE+LK
Sbjct: 213 LVEKFASGISMVTSLALAVSYPTLAAAPHMFINAYKNALAIAVATDYTFPQAEKVKEFLK 272

Query: 303 DPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDG---EMGFSLFDD 163
           DPSKF V                            SD    E GF LFD+
Sbjct: 273 DPSKFVVAAAAVSADAGGGSAQAGAAAKVEEKKEESDEEDYEGGFGLFDE 322



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>RLA0_LUPLU (P50345) 60S acidic ribosomal protein P0|
          Length = 322

 Score = 90.9 bits (224), Expect = 2e-18
 Identities = 49/110 (44%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
 Frame = -3

Query: 486 DLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYL 307
           DL++KFA GVS       +   P  +AAPH+F+NAYKNVLAVA+ T+YS+  AD++KEYL
Sbjct: 213 DLLEKFAIGVSQCYFSDTSHFIPNPSAAPHVFINAYKNVLAVAVATEYSFPQADEVKEYL 272

Query: 306 KDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXX--XXXSDGEMGFSLFDD 163
           KDPSKFA                               SD EMGF LFD+
Sbjct: 273 KDPSKFAAVAAAAAPAADSGAAPAAAAKAEKEEEPAEESDDEMGFGLFDE 322



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>RLA0_BRARE (Q9PV90) 60S acidic ribosomal protein P0 (L10E)|
          Length = 319

 Score = 84.7 bits (208), Expect = 1e-16
 Identities = 43/106 (40%), Positives = 56/106 (52%)
 Frame = -3

Query: 483 LMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLK 304
           L  +F  GV  +AS+ L I YPT+A+ PH  +N YK VLAV +ETDY++  A+K+K YL 
Sbjct: 214 LHKRFLKGVRNIASVCLQIGYPTLASIPHTIINGYKRVLAVTVETDYTFPLAEKVKAYLA 273

Query: 303 DPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 166
           DP+ FAV                            SD +MGF LFD
Sbjct: 274 DPTAFAVAAPVAAATEQKSAAPAAKEEAPKEDSEESDEDMGFGLFD 319



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>RLA0_CHICK (P47826) 60S acidic ribosomal protein P0 (L10E)|
          Length = 316

 Score = 82.4 bits (202), Expect = 6e-16
 Identities = 43/106 (40%), Positives = 55/106 (51%)
 Frame = -3

Query: 483 LMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLK 304
           L  +F  GV  VAS+ L I YPT+A+ PH  +N YK VLAVA+ETDY++  A+K+K +L 
Sbjct: 211 LHKRFLEGVRNVASVCLQIGYPTIASVPHSIVNGYKRVLAVAVETDYTFPLAEKVKAFLA 270

Query: 303 DPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 166
           DPS F                              SD +MGF LFD
Sbjct: 271 DPSAFVAAAPVVVETAAPAAAAAPAKEAPKEESEESDEDMGFGLFD 316



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>RLA0_RANSY (Q9DG68) 60S acidic ribosomal protein P0 (L10E)|
          Length = 315

 Score = 81.6 bits (200), Expect = 1e-15
 Identities = 44/106 (41%), Positives = 56/106 (52%)
 Frame = -3

Query: 483 LMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLK 304
           L  +F  GV  +AS+ L I YPT+A+ PH  +N YK VLA+A+ETDYS+  ADK+K +L 
Sbjct: 211 LRARFLEGVRNIASVCLQIGYPTVASVPHSVVNGYKRVLALAVETDYSFPLADKVKAFLA 270

Query: 303 DPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 166
           DPS F V                            SD +MGF LFD
Sbjct: 271 DPSAFVV-AAPVAETAAAPAASAAPAKEEKEESEESDDDMGFGLFD 315



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>RLA0_CERCA (Q9U3U0) 60S acidic ribosomal protein P0 (CcP0)|
          Length = 317

 Score = 81.3 bits (199), Expect = 1e-15
 Identities = 42/108 (38%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
 Frame = -3

Query: 486 DLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYL 307
           DL  KF +GV+ +A++SL I YPT+A+APH   N +KN+LA+A  T+  +  A  IKE++
Sbjct: 210 DLRAKFQAGVANLAAVSLQIGYPTIASAPHSIANGFKNLLAIAASTEVEFKQAATIKEFI 269

Query: 306 KDPSKF-AVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 166
           KDPSKF A                              D +MGF LFD
Sbjct: 270 KDPSKFVAAAAASAPAAGAGAAAEKKEEAKKEESESEEDDDMGFGLFD 317



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>RLA0_DROME (P19889) 60S acidic ribosomal protein P0 (DNA-(apurinic or|
           apyrimidinic site) lyase) (EC 4.2.99.18)
           (Apurinic-apyrimidinic endonuclease)
          Length = 317

 Score = 80.9 bits (198), Expect = 2e-15
 Identities = 41/108 (37%), Positives = 56/108 (51%), Gaps = 1/108 (0%)
 Frame = -3

Query: 486 DLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYL 307
           DL  KF  GV+ +A++ L++ YPT+A+APH   N +KN+LA+A  T+  +  A  IKEY+
Sbjct: 210 DLRAKFQQGVANLAAVCLSVGYPTIASAPHSIANGFKNLLAIAATTEVEFKEATTIKEYI 269

Query: 306 KDPSKFAVXXXXXXX-XXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 166
           KDPSKFA                               D +MGF LFD
Sbjct: 270 KDPSKFAAAASASAAPAAGGATEKKEEAKKPESESEEEDDDMGFGLFD 317



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>RLA0_ICTPU (Q90YX1) 60S acidic ribosomal protein P0 (L10E)|
          Length = 317

 Score = 80.1 bits (196), Expect = 3e-15
 Identities = 37/67 (55%), Positives = 48/67 (71%)
 Frame = -3

Query: 483 LMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLK 304
           L  +F  GV  +AS+ L I YPT+A+ PH  +N YK VL VA+ETDYS+  ADK+K +L 
Sbjct: 211 LHKRFLEGVRNIASVCLQIGYPTLASIPHSIINGYKRVLRVAVETDYSFPMADKVKAFLA 270

Query: 303 DPSKFAV 283
           DPS+FAV
Sbjct: 271 DPSRFAV 277



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>RLA0_RAT (P19945) 60S acidic ribosomal protein P0 (L10E)|
          Length = 317

 Score = 79.7 bits (195), Expect = 4e-15
 Identities = 42/107 (39%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
 Frame = -3

Query: 483 LMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLK 304
           L  +F  GV  VAS+ L I YPT+A+ PH  +N YK VLA+++ETDY++  A+K+K +L 
Sbjct: 211 LHTRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLA 270

Query: 303 DPSKFAVXX-XXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 166
           DPS FA                              SD +MGF LFD
Sbjct: 271 DPSAFAAAAPVAAATTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD 317



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>RLA0_HUMAN (P05388) 60S acidic ribosomal protein P0 (L10E)|
          Length = 317

 Score = 79.3 bits (194), Expect = 5e-15
 Identities = 42/107 (39%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
 Frame = -3

Query: 483 LMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLK 304
           L  +F  GV  VAS+ L I YPT+A+ PH  +N YK VLA+++ETDY++  A+K+K +L 
Sbjct: 211 LHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLA 270

Query: 303 DPSKF-AVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 166
           DPS F A                             SD +MGF LFD
Sbjct: 271 DPSAFVAAAPVAAATTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD 317



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>RLA0_BOVIN (Q95140) 60S acidic ribosomal protein P0 (L10E) (Fragment)|
          Length = 309

 Score = 78.2 bits (191), Expect = 1e-14
 Identities = 42/108 (38%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
 Frame = -3

Query: 483 LMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLK 304
           L  +F  GV  VAS+ L I YPT+A+ PH  +N YK VLA+++ETDY++  A+K+K +L 
Sbjct: 202 LHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLA 261

Query: 303 DPSKF--AVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 166
           DPS F  A                             SD +MGF LFD
Sbjct: 262 DPSAFVAAAPVAAAPAAAPAATTAAPAKVEAKEESEESDEDMGFGLFD 309



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>RLA0_MOUSE (P14869) 60S acidic ribosomal protein P0 (L10E)|
          Length = 317

 Score = 77.8 bits (190), Expect = 1e-14
 Identities = 40/107 (37%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
 Frame = -3

Query: 483 LMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLK 304
           L  +F  GV  VAS+ L I YPT+A+ PH  +N YK VLA+++ET+Y++   +K+K +L 
Sbjct: 211 LHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETEYTFPLTEKVKAFLA 270

Query: 303 DPSKFAVXX-XXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 166
           DPS FA                              SD +MGF LFD
Sbjct: 271 DPSAFAAAAPAAAATTAAPAAAAAPAKAEAKEESEESDEDMGFGLFD 317



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>RLA0_CAEEL (Q93572) 60S acidic ribosomal protein P0|
          Length = 311

 Score = 73.6 bits (179), Expect = 3e-13
 Identities = 41/107 (38%), Positives = 55/107 (51%)
 Frame = -3

Query: 486 DLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYL 307
           +L  +F SGV  VAS+SLA++YPT+A+  H   N  +N+L VA  TD S+  A+ IK ++
Sbjct: 209 ELRKRFLSGVRNVASVSLAVNYPTLASVAHSLANGLQNMLGVAAVTDVSFKEAETIKAFI 268

Query: 306 KDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 166
            DPSKFA                             SD +MGF LFD
Sbjct: 269 ADPSKFA----AAAPAAAAAPAAAAPAAKKEEPKEESDDDMGFGLFD 311



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>RLA0_SCHPO (O74864) 60S acidic ribosomal protein P0|
          Length = 312

 Score = 68.6 bits (166), Expect = 9e-12
 Identities = 35/107 (32%), Positives = 55/107 (51%)
 Frame = -3

Query: 486 DLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYL 307
           DL+    S  S++ ++SL  +YPT+ +  H  +NAYKN++AV+L T+Y+++  ++ K +L
Sbjct: 208 DLIGHLLSAASIITAISLGANYPTILSVMHSVVNAYKNLVAVSLATEYTFEGTEQTKAFL 267

Query: 306 KDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 166
            DPS F V                            SD +MGF LFD
Sbjct: 268 ADPSAFVV--AAAPAAAAGGEAEAPAAEAAAEEEEESDEDMGFGLFD 312



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>RLA0_DICDI (P22685) 60S acidic ribosomal protein P0|
          Length = 305

 Score = 68.2 bits (165), Expect = 1e-11
 Identities = 28/57 (49%), Positives = 44/57 (77%)
 Frame = -3

Query: 486 DLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIK 316
           DL++KF  G+  +A++SL I YPT+A+ PH  +NA+KN+LA++ ET Y++D A+K K
Sbjct: 206 DLINKFKQGIFNIAAISLEIGYPTVASIPHSVMNAFKNLLAISFETSYTFDAAEKFK 262



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>RLA0_YEAST (P05317) 60S acidic ribosomal protein P0 (L10E)|
          Length = 312

 Score = 67.8 bits (164), Expect = 1e-11
 Identities = 35/107 (32%), Positives = 53/107 (49%)
 Frame = -3

Query: 486 DLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYL 307
           +L+  F S VS +AS+SLAI YPT+ +  H  +N YK++LAVA+   Y Y   + + + +
Sbjct: 208 ELVSHFVSAVSTIASISLAIGYPTLPSVGHTLINNYKDLLAVAIAASYHYPEIEDLVDRI 267

Query: 306 KDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 166
           ++P K+A                             SD +MGF LFD
Sbjct: 268 ENPEKYA--AAAPAATSAASGDAAPAEEAAAEEEEESDDDMGFGLFD 312



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>RLA0_PLAF8 (Q94660) 60S acidic ribosomal protein P0|
          Length = 316

 Score = 67.8 bits (164), Expect = 1e-11
 Identities = 33/107 (30%), Positives = 57/107 (53%)
 Frame = -3

Query: 486 DLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYL 307
           D+++KF+ GVS VA+LS A    T A+ PH+F+ A+KN++A+ +++DY++     +K+++
Sbjct: 210 DILEKFSKGVSNVAALSRATGVITEASYPHVFVEAFKNIVALIIDSDYTFPLMKILKKWV 269

Query: 306 KDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 166
           ++P  FA                              DG MGF +FD
Sbjct: 270 ENPEAFAAVAAPASAAKADEPKKEEAKKVEEEEEEEEDGFMGFGMFD 316



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>RLA0_EIMTE (Q967Y7) 60S acidic ribosomal protein P0|
          Length = 314

 Score = 66.6 bits (161), Expect = 3e-11
 Identities = 33/106 (31%), Positives = 55/106 (51%)
 Frame = -3

Query: 483 LMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLK 304
           +++ FA+G + VA++S A+  P+ AAAPH  L A++N  A+ L+T + +    ++KE ++
Sbjct: 210 ILEAFAAGAANVAAVSRAVGLPSAAAAPHSILEAFRNCAALCLDTPFCFPQMQRLKEMVE 269

Query: 303 DPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 166
           +P+ FA                              DG+MGFSLFD
Sbjct: 270 NPAAFA-AAAAPAAAAPAAAPAAAAKAPEPEEEEEEDGDMGFSLFD 314



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>RLA0_NEUCR (Q96TJ5) 60S acidic ribosomal protein P0|
          Length = 313

 Score = 62.4 bits (150), Expect = 6e-10
 Identities = 26/66 (39%), Positives = 48/66 (72%)
 Frame = -3

Query: 483 LMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLK 304
           L+  F++ ++ +ASLSLA+++PT+ +  H  +NAYK VLAVA+ET+ S+   +++K+ + 
Sbjct: 209 LLKAFSTAITTIASLSLALNFPTLPSVIHSVVNAYKKVLAVAIETEISWPEIEELKDRIA 268

Query: 303 DPSKFA 286
           +P  +A
Sbjct: 269 NPEAYA 274



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>RLA0_PODAN (Q9C3Z6) 60S acidic ribosomal protein P0|
          Length = 314

 Score = 60.5 bits (145), Expect = 2e-09
 Identities = 24/66 (36%), Positives = 48/66 (72%)
 Frame = -3

Query: 483 LMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLK 304
           L+  F+S ++ +A++SLA+++PT+ +  H  +N+YK VLAVA+ET+ S+   +++K+ + 
Sbjct: 209 LLKAFSSAITTIAAVSLALNFPTLPSVIHSLVNSYKKVLAVAIETEISWPEIEELKDRIA 268

Query: 303 DPSKFA 286
           +P  +A
Sbjct: 269 NPEAYA 274



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>RLA0_CHERU (P29764) 60S acidic ribosomal protein P0 (Light-induced 34 kDa|
           protein)
          Length = 321

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 24/30 (80%), Positives = 28/30 (93%)
 Frame = -3

Query: 486 DLMDKFASGVSMVASLSLAISYPTMAAAPH 397
           DL+ +FA+GVSMV SLSLAISYPT+AAAPH
Sbjct: 213 DLLARFATGVSMVTSLSLAISYPTLAAAPH 242



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>RLA0_TRYCR (P26796) 60S acidic ribosomal protein P0|
          Length = 323

 Score = 49.7 bits (117), Expect = 4e-06
 Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
 Frame = -3

Query: 486 DLMDKFA-SGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHAD 325
           D+++K+   G+S VA+LSL    PT A  PHM ++A+K +L  ++ T+Y +D  D
Sbjct: 216 DVVEKYLLEGISNVAALSLGAGIPTAATLPHMIMDAFKTLLGASVATEYEFDEFD 270



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>RLA0_LEICH (P39096) 60S acidic ribosomal protein P0|
          Length = 322

 Score = 38.9 bits (89), Expect = 0.007
 Identities = 18/52 (34%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
 Frame = -3

Query: 486 DLMDKFA-SGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYD 334
           D+++K    G+S VA+++L    PT +    M ++A+KN+LAV++ T Y ++
Sbjct: 215 DMVEKMLMEGLSNVAAMALGAGIPTSSTIGPMLVDAFKNLLAVSVATSYEFE 266



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>RLA0_LEIIN (P39097) 60S acidic ribosomal protein P0|
          Length = 323

 Score = 38.9 bits (89), Expect = 0.007
 Identities = 18/52 (34%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
 Frame = -3

Query: 486 DLMDKFA-SGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYD 334
           D+++K    G+S VA+++L    PT +    M ++A+KN+LAV++ T Y ++
Sbjct: 216 DMVEKMLMEGLSNVAAMALGAGIPTSSTIGPMLVDAFKNLLAVSVATSYEFE 267



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>CHRD_HUMAN (Q9H2X0) Chordin precursor|
          Length = 955

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +3

Query: 396 CAVQQPWWGMRSPGTVRQPWKHQKQTCPS 482
           CA + P WG R+ G  R   K+ K  CP+
Sbjct: 80  CACEAPQWGRRTRGPGRVSCKNIKPECPT 108



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>AKA12_HUMAN (Q02952) A-kinase anchor protein 12 (A-kinase anchor protein 250|
           kDa) (AKAP 250) (Myasthenia gravis autoantigen gravin)
          Length = 1781

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +3

Query: 327 QHGHTSSLSPKRPQEHSCMH*GTCAVQQ 410
           Q G +S+ SP+ P+E +C+  G   VQQ
Sbjct: 560 QKGESSASSPEEPEEITCLEKGLAEVQQ 587



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>Y421_METJA (Q57864) Hypothetical protein MJ0421|
          Length = 360

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 4/36 (11%)
 Frame = -3

Query: 378 KNVLAVALETDYSYDH----ADKIKEYLKDPSKFAV 283
           + VL V  ET+  +D     A+KIK+Y+K+   FAV
Sbjct: 58  ERVLKVYFETETDFDKIVNLAEKIKDYIKEDETFAV 93


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,809,127
Number of Sequences: 219361
Number of extensions: 936165
Number of successful extensions: 2706
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 2623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2699
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3420806017
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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