Clone Name | rbart34f12 |
---|---|
Clone Library Name | barley_pub |
>RLA0_ORYSA (P41095) 60S acidic ribosomal protein P0| Length = 318 Score = 133 bits (335), Expect = 2e-31 Identities = 69/107 (64%), Positives = 76/107 (71%) Frame = -3 Query: 486 DLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYL 307 DLM+KFASGVSMVAS+SLAISYPT+AAAPHMFLN YKNVLAVA+ET+YSY HADKIKEYL Sbjct: 212 DLMEKFASGVSMVASVSLAISYPTIAAAPHMFLNGYKNVLAVAVETEYSYPHADKIKEYL 271 Query: 306 KDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 166 KDPSKFAV SDG++G SLFD Sbjct: 272 KDPSKFAVAAPVAADSGAAAPSAAKEEEKKEEPEEESDGDLGMSLFD 318
>RLA0_MAIZE (O24573) 60S acidic ribosomal protein P0| Length = 318 Score = 131 bits (329), Expect = 1e-30 Identities = 70/108 (64%), Positives = 76/108 (70%) Frame = -3 Query: 486 DLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYL 307 DL++KFA+GVSMVASLSLAISYPT+AA PHMF+N YKNVLAVA+ETDYSY HADKIKEYL Sbjct: 212 DLIEKFATGVSMVASLSLAISYPTLAAVPHMFINGYKNVLAVAVETDYSYPHADKIKEYL 271 Query: 306 KDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFDD 163 KDPSKFAV SD EMGFSLFDD Sbjct: 272 KDPSKFAV-AAPVAAGDSGASAAPKEEEKAAEPEEESDEEMGFSLFDD 318
>RLA0_SOYBN (P50346) 60S acidic ribosomal protein P0| Length = 320 Score = 124 bits (311), Expect = 1e-28 Identities = 66/108 (61%), Positives = 74/108 (68%), Gaps = 1/108 (0%) Frame = -3 Query: 486 DLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYL 307 DL+ KFA+GVSMV SLSLAISYPT+AAAPHMF+NAYKNVLAVA+ETDYS+ ADK+KEYL Sbjct: 213 DLIGKFAAGVSMVTSLSLAISYPTLAAAPHMFVNAYKNVLAVAVETDYSFPEADKVKEYL 272 Query: 306 KDPSKFAVXXXXX-XXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 166 KDPSKFAV SD +MGFSLFD Sbjct: 273 KDPSKFAVAAVAAPAAASGAPAAAAKEEEKKEEPAEESDDDMGFSLFD 320
>RLA0A_ARATH (O04204) 60S acidic ribosomal protein P0-A| Length = 317 Score = 114 bits (284), Expect = 2e-25 Identities = 59/106 (55%), Positives = 72/106 (67%) Frame = -3 Query: 486 DLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYL 307 DL++KFA+GVSM+ +LSLAISYPT+AAAPHMFLNAYKNVLAVAL T+YS+ A+ +KE+L Sbjct: 213 DLVEKFAAGVSMITALSLAISYPTVAAAPHMFLNAYKNVLAVALATEYSFPQAENVKEFL 272 Query: 306 KDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLF 169 KDP+KFAV SDG+MGF LF Sbjct: 273 KDPTKFAV--AVAAPVSGESGGAVVAVAVEEEAAEESDGDMGFDLF 316
>RLA0B_ARATH (Q42112) 60S acidic ribosomal protein P0-B| Length = 320 Score = 109 bits (272), Expect = 4e-24 Identities = 53/107 (49%), Positives = 68/107 (63%) Frame = -3 Query: 483 LMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLK 304 L++KFASG+SMV SL+LA+SYPT+AAAPHMF+NAYKN LA+A+ T+Y++ A+K+KEYLK Sbjct: 213 LVEKFASGISMVTSLALAVSYPTLAAAPHMFINAYKNALAIAVATEYTFPQAEKVKEYLK 272 Query: 303 DPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFDD 163 DPSKFAV D F LFD+ Sbjct: 273 DPSKFAVASVAAVSADAGGGAPAAAKVEEKEESDEEDYGGDFGLFDE 319
>RLA0C_ARATH (P57691) 60S acidic ribosomal protein P0-C| Length = 323 Score = 109 bits (272), Expect = 4e-24 Identities = 55/110 (50%), Positives = 70/110 (63%), Gaps = 3/110 (2%) Frame = -3 Query: 483 LMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLK 304 L++KFASG+SMV SL+LA+SYPT+AAAPHMF+NAYKN LA+A+ TDY++ A+K+KE+LK Sbjct: 213 LVEKFASGISMVTSLALAVSYPTLAAAPHMFINAYKNALAIAVATDYTFPQAEKVKEFLK 272 Query: 303 DPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDG---EMGFSLFDD 163 DPSKF V SD E GF LFD+ Sbjct: 273 DPSKFVVAAAAVSADAGGGSAQAGAAAKVEEKKEESDEEDYEGGFGLFDE 322
>RLA0_LUPLU (P50345) 60S acidic ribosomal protein P0| Length = 322 Score = 90.9 bits (224), Expect = 2e-18 Identities = 49/110 (44%), Positives = 61/110 (55%), Gaps = 2/110 (1%) Frame = -3 Query: 486 DLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYL 307 DL++KFA GVS + P +AAPH+F+NAYKNVLAVA+ T+YS+ AD++KEYL Sbjct: 213 DLLEKFAIGVSQCYFSDTSHFIPNPSAAPHVFINAYKNVLAVAVATEYSFPQADEVKEYL 272 Query: 306 KDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXX--XXXSDGEMGFSLFDD 163 KDPSKFA SD EMGF LFD+ Sbjct: 273 KDPSKFAAVAAAAAPAADSGAAPAAAAKAEKEEEPAEESDDEMGFGLFDE 322
>RLA0_BRARE (Q9PV90) 60S acidic ribosomal protein P0 (L10E)| Length = 319 Score = 84.7 bits (208), Expect = 1e-16 Identities = 43/106 (40%), Positives = 56/106 (52%) Frame = -3 Query: 483 LMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLK 304 L +F GV +AS+ L I YPT+A+ PH +N YK VLAV +ETDY++ A+K+K YL Sbjct: 214 LHKRFLKGVRNIASVCLQIGYPTLASIPHTIINGYKRVLAVTVETDYTFPLAEKVKAYLA 273 Query: 303 DPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 166 DP+ FAV SD +MGF LFD Sbjct: 274 DPTAFAVAAPVAAATEQKSAAPAAKEEAPKEDSEESDEDMGFGLFD 319
>RLA0_CHICK (P47826) 60S acidic ribosomal protein P0 (L10E)| Length = 316 Score = 82.4 bits (202), Expect = 6e-16 Identities = 43/106 (40%), Positives = 55/106 (51%) Frame = -3 Query: 483 LMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLK 304 L +F GV VAS+ L I YPT+A+ PH +N YK VLAVA+ETDY++ A+K+K +L Sbjct: 211 LHKRFLEGVRNVASVCLQIGYPTIASVPHSIVNGYKRVLAVAVETDYTFPLAEKVKAFLA 270 Query: 303 DPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 166 DPS F SD +MGF LFD Sbjct: 271 DPSAFVAAAPVVVETAAPAAAAAPAKEAPKEESEESDEDMGFGLFD 316
>RLA0_RANSY (Q9DG68) 60S acidic ribosomal protein P0 (L10E)| Length = 315 Score = 81.6 bits (200), Expect = 1e-15 Identities = 44/106 (41%), Positives = 56/106 (52%) Frame = -3 Query: 483 LMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLK 304 L +F GV +AS+ L I YPT+A+ PH +N YK VLA+A+ETDYS+ ADK+K +L Sbjct: 211 LRARFLEGVRNIASVCLQIGYPTVASVPHSVVNGYKRVLALAVETDYSFPLADKVKAFLA 270 Query: 303 DPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 166 DPS F V SD +MGF LFD Sbjct: 271 DPSAFVV-AAPVAETAAAPAASAAPAKEEKEESEESDDDMGFGLFD 315
>RLA0_CERCA (Q9U3U0) 60S acidic ribosomal protein P0 (CcP0)| Length = 317 Score = 81.3 bits (199), Expect = 1e-15 Identities = 42/108 (38%), Positives = 57/108 (52%), Gaps = 1/108 (0%) Frame = -3 Query: 486 DLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYL 307 DL KF +GV+ +A++SL I YPT+A+APH N +KN+LA+A T+ + A IKE++ Sbjct: 210 DLRAKFQAGVANLAAVSLQIGYPTIASAPHSIANGFKNLLAIAASTEVEFKQAATIKEFI 269 Query: 306 KDPSKF-AVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 166 KDPSKF A D +MGF LFD Sbjct: 270 KDPSKFVAAAAASAPAAGAGAAAEKKEEAKKEESESEEDDDMGFGLFD 317
>RLA0_DROME (P19889) 60S acidic ribosomal protein P0 (DNA-(apurinic or| apyrimidinic site) lyase) (EC 4.2.99.18) (Apurinic-apyrimidinic endonuclease) Length = 317 Score = 80.9 bits (198), Expect = 2e-15 Identities = 41/108 (37%), Positives = 56/108 (51%), Gaps = 1/108 (0%) Frame = -3 Query: 486 DLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYL 307 DL KF GV+ +A++ L++ YPT+A+APH N +KN+LA+A T+ + A IKEY+ Sbjct: 210 DLRAKFQQGVANLAAVCLSVGYPTIASAPHSIANGFKNLLAIAATTEVEFKEATTIKEYI 269 Query: 306 KDPSKFAVXXXXXXX-XXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 166 KDPSKFA D +MGF LFD Sbjct: 270 KDPSKFAAAASASAAPAAGGATEKKEEAKKPESESEEEDDDMGFGLFD 317
>RLA0_ICTPU (Q90YX1) 60S acidic ribosomal protein P0 (L10E)| Length = 317 Score = 80.1 bits (196), Expect = 3e-15 Identities = 37/67 (55%), Positives = 48/67 (71%) Frame = -3 Query: 483 LMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLK 304 L +F GV +AS+ L I YPT+A+ PH +N YK VL VA+ETDYS+ ADK+K +L Sbjct: 211 LHKRFLEGVRNIASVCLQIGYPTLASIPHSIINGYKRVLRVAVETDYSFPMADKVKAFLA 270 Query: 303 DPSKFAV 283 DPS+FAV Sbjct: 271 DPSRFAV 277
>RLA0_RAT (P19945) 60S acidic ribosomal protein P0 (L10E)| Length = 317 Score = 79.7 bits (195), Expect = 4e-15 Identities = 42/107 (39%), Positives = 56/107 (52%), Gaps = 1/107 (0%) Frame = -3 Query: 483 LMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLK 304 L +F GV VAS+ L I YPT+A+ PH +N YK VLA+++ETDY++ A+K+K +L Sbjct: 211 LHTRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLA 270 Query: 303 DPSKFAVXX-XXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 166 DPS FA SD +MGF LFD Sbjct: 271 DPSAFAAAAPVAAATTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD 317
>RLA0_HUMAN (P05388) 60S acidic ribosomal protein P0 (L10E)| Length = 317 Score = 79.3 bits (194), Expect = 5e-15 Identities = 42/107 (39%), Positives = 56/107 (52%), Gaps = 1/107 (0%) Frame = -3 Query: 483 LMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLK 304 L +F GV VAS+ L I YPT+A+ PH +N YK VLA+++ETDY++ A+K+K +L Sbjct: 211 LHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLA 270 Query: 303 DPSKF-AVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 166 DPS F A SD +MGF LFD Sbjct: 271 DPSAFVAAAPVAAATTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD 317
>RLA0_BOVIN (Q95140) 60S acidic ribosomal protein P0 (L10E) (Fragment)| Length = 309 Score = 78.2 bits (191), Expect = 1e-14 Identities = 42/108 (38%), Positives = 56/108 (51%), Gaps = 2/108 (1%) Frame = -3 Query: 483 LMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLK 304 L +F GV VAS+ L I YPT+A+ PH +N YK VLA+++ETDY++ A+K+K +L Sbjct: 202 LHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLA 261 Query: 303 DPSKF--AVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 166 DPS F A SD +MGF LFD Sbjct: 262 DPSAFVAAAPVAAAPAAAPAATTAAPAKVEAKEESEESDEDMGFGLFD 309
>RLA0_MOUSE (P14869) 60S acidic ribosomal protein P0 (L10E)| Length = 317 Score = 77.8 bits (190), Expect = 1e-14 Identities = 40/107 (37%), Positives = 55/107 (51%), Gaps = 1/107 (0%) Frame = -3 Query: 483 LMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLK 304 L +F GV VAS+ L I YPT+A+ PH +N YK VLA+++ET+Y++ +K+K +L Sbjct: 211 LHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETEYTFPLTEKVKAFLA 270 Query: 303 DPSKFAVXX-XXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 166 DPS FA SD +MGF LFD Sbjct: 271 DPSAFAAAAPAAAATTAAPAAAAAPAKAEAKEESEESDEDMGFGLFD 317
>RLA0_CAEEL (Q93572) 60S acidic ribosomal protein P0| Length = 311 Score = 73.6 bits (179), Expect = 3e-13 Identities = 41/107 (38%), Positives = 55/107 (51%) Frame = -3 Query: 486 DLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYL 307 +L +F SGV VAS+SLA++YPT+A+ H N +N+L VA TD S+ A+ IK ++ Sbjct: 209 ELRKRFLSGVRNVASVSLAVNYPTLASVAHSLANGLQNMLGVAAVTDVSFKEAETIKAFI 268 Query: 306 KDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 166 DPSKFA SD +MGF LFD Sbjct: 269 ADPSKFA----AAAPAAAAAPAAAAPAAKKEEPKEESDDDMGFGLFD 311
>RLA0_SCHPO (O74864) 60S acidic ribosomal protein P0| Length = 312 Score = 68.6 bits (166), Expect = 9e-12 Identities = 35/107 (32%), Positives = 55/107 (51%) Frame = -3 Query: 486 DLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYL 307 DL+ S S++ ++SL +YPT+ + H +NAYKN++AV+L T+Y+++ ++ K +L Sbjct: 208 DLIGHLLSAASIITAISLGANYPTILSVMHSVVNAYKNLVAVSLATEYTFEGTEQTKAFL 267 Query: 306 KDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 166 DPS F V SD +MGF LFD Sbjct: 268 ADPSAFVV--AAAPAAAAGGEAEAPAAEAAAEEEEESDEDMGFGLFD 312
>RLA0_DICDI (P22685) 60S acidic ribosomal protein P0| Length = 305 Score = 68.2 bits (165), Expect = 1e-11 Identities = 28/57 (49%), Positives = 44/57 (77%) Frame = -3 Query: 486 DLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIK 316 DL++KF G+ +A++SL I YPT+A+ PH +NA+KN+LA++ ET Y++D A+K K Sbjct: 206 DLINKFKQGIFNIAAISLEIGYPTVASIPHSVMNAFKNLLAISFETSYTFDAAEKFK 262
>RLA0_YEAST (P05317) 60S acidic ribosomal protein P0 (L10E)| Length = 312 Score = 67.8 bits (164), Expect = 1e-11 Identities = 35/107 (32%), Positives = 53/107 (49%) Frame = -3 Query: 486 DLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYL 307 +L+ F S VS +AS+SLAI YPT+ + H +N YK++LAVA+ Y Y + + + + Sbjct: 208 ELVSHFVSAVSTIASISLAIGYPTLPSVGHTLINNYKDLLAVAIAASYHYPEIEDLVDRI 267 Query: 306 KDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 166 ++P K+A SD +MGF LFD Sbjct: 268 ENPEKYA--AAAPAATSAASGDAAPAEEAAAEEEEESDDDMGFGLFD 312
>RLA0_PLAF8 (Q94660) 60S acidic ribosomal protein P0| Length = 316 Score = 67.8 bits (164), Expect = 1e-11 Identities = 33/107 (30%), Positives = 57/107 (53%) Frame = -3 Query: 486 DLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYL 307 D+++KF+ GVS VA+LS A T A+ PH+F+ A+KN++A+ +++DY++ +K+++ Sbjct: 210 DILEKFSKGVSNVAALSRATGVITEASYPHVFVEAFKNIVALIIDSDYTFPLMKILKKWV 269 Query: 306 KDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 166 ++P FA DG MGF +FD Sbjct: 270 ENPEAFAAVAAPASAAKADEPKKEEAKKVEEEEEEEEDGFMGFGMFD 316
>RLA0_EIMTE (Q967Y7) 60S acidic ribosomal protein P0| Length = 314 Score = 66.6 bits (161), Expect = 3e-11 Identities = 33/106 (31%), Positives = 55/106 (51%) Frame = -3 Query: 483 LMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLK 304 +++ FA+G + VA++S A+ P+ AAAPH L A++N A+ L+T + + ++KE ++ Sbjct: 210 ILEAFAAGAANVAAVSRAVGLPSAAAAPHSILEAFRNCAALCLDTPFCFPQMQRLKEMVE 269 Query: 303 DPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 166 +P+ FA DG+MGFSLFD Sbjct: 270 NPAAFA-AAAAPAAAAPAAAPAAAAKAPEPEEEEEEDGDMGFSLFD 314
>RLA0_NEUCR (Q96TJ5) 60S acidic ribosomal protein P0| Length = 313 Score = 62.4 bits (150), Expect = 6e-10 Identities = 26/66 (39%), Positives = 48/66 (72%) Frame = -3 Query: 483 LMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLK 304 L+ F++ ++ +ASLSLA+++PT+ + H +NAYK VLAVA+ET+ S+ +++K+ + Sbjct: 209 LLKAFSTAITTIASLSLALNFPTLPSVIHSVVNAYKKVLAVAIETEISWPEIEELKDRIA 268 Query: 303 DPSKFA 286 +P +A Sbjct: 269 NPEAYA 274
>RLA0_PODAN (Q9C3Z6) 60S acidic ribosomal protein P0| Length = 314 Score = 60.5 bits (145), Expect = 2e-09 Identities = 24/66 (36%), Positives = 48/66 (72%) Frame = -3 Query: 483 LMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLK 304 L+ F+S ++ +A++SLA+++PT+ + H +N+YK VLAVA+ET+ S+ +++K+ + Sbjct: 209 LLKAFSSAITTIAAVSLALNFPTLPSVIHSLVNSYKKVLAVAIETEISWPEIEELKDRIA 268 Query: 303 DPSKFA 286 +P +A Sbjct: 269 NPEAYA 274
>RLA0_CHERU (P29764) 60S acidic ribosomal protein P0 (Light-induced 34 kDa| protein) Length = 321 Score = 51.6 bits (122), Expect = 1e-06 Identities = 24/30 (80%), Positives = 28/30 (93%) Frame = -3 Query: 486 DLMDKFASGVSMVASLSLAISYPTMAAAPH 397 DL+ +FA+GVSMV SLSLAISYPT+AAAPH Sbjct: 213 DLLARFATGVSMVTSLSLAISYPTLAAAPH 242
>RLA0_TRYCR (P26796) 60S acidic ribosomal protein P0| Length = 323 Score = 49.7 bits (117), Expect = 4e-06 Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 1/55 (1%) Frame = -3 Query: 486 DLMDKFA-SGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHAD 325 D+++K+ G+S VA+LSL PT A PHM ++A+K +L ++ T+Y +D D Sbjct: 216 DVVEKYLLEGISNVAALSLGAGIPTAATLPHMIMDAFKTLLGASVATEYEFDEFD 270
>RLA0_LEICH (P39096) 60S acidic ribosomal protein P0| Length = 322 Score = 38.9 bits (89), Expect = 0.007 Identities = 18/52 (34%), Positives = 34/52 (65%), Gaps = 1/52 (1%) Frame = -3 Query: 486 DLMDKFA-SGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYD 334 D+++K G+S VA+++L PT + M ++A+KN+LAV++ T Y ++ Sbjct: 215 DMVEKMLMEGLSNVAAMALGAGIPTSSTIGPMLVDAFKNLLAVSVATSYEFE 266
>RLA0_LEIIN (P39097) 60S acidic ribosomal protein P0| Length = 323 Score = 38.9 bits (89), Expect = 0.007 Identities = 18/52 (34%), Positives = 34/52 (65%), Gaps = 1/52 (1%) Frame = -3 Query: 486 DLMDKFA-SGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYD 334 D+++K G+S VA+++L PT + M ++A+KN+LAV++ T Y ++ Sbjct: 216 DMVEKMLMEGLSNVAAMALGAGIPTSSTIGPMLVDAFKNLLAVSVATSYEFE 267
>CHRD_HUMAN (Q9H2X0) Chordin precursor| Length = 955 Score = 28.9 bits (63), Expect = 7.7 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = +3 Query: 396 CAVQQPWWGMRSPGTVRQPWKHQKQTCPS 482 CA + P WG R+ G R K+ K CP+ Sbjct: 80 CACEAPQWGRRTRGPGRVSCKNIKPECPT 108
>AKA12_HUMAN (Q02952) A-kinase anchor protein 12 (A-kinase anchor protein 250| kDa) (AKAP 250) (Myasthenia gravis autoantigen gravin) Length = 1781 Score = 28.9 bits (63), Expect = 7.7 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = +3 Query: 327 QHGHTSSLSPKRPQEHSCMH*GTCAVQQ 410 Q G +S+ SP+ P+E +C+ G VQQ Sbjct: 560 QKGESSASSPEEPEEITCLEKGLAEVQQ 587
>Y421_METJA (Q57864) Hypothetical protein MJ0421| Length = 360 Score = 28.9 bits (63), Expect = 7.7 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 4/36 (11%) Frame = -3 Query: 378 KNVLAVALETDYSYDH----ADKIKEYLKDPSKFAV 283 + VL V ET+ +D A+KIK+Y+K+ FAV Sbjct: 58 ERVLKVYFETETDFDKIVNLAEKIKDYIKEDETFAV 93 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,809,127 Number of Sequences: 219361 Number of extensions: 936165 Number of successful extensions: 2706 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 2623 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2699 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3420806017 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)