ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart34f09 |
|---|---|
| Clone Library Name | barley_pub |
>MTNN_TREPA (P96122) MTA/SAH nucleosidase (EC 3.2.2.9) (5'-methylthioadenosine| nucleosidase) (S-adenosylhomocysteine nucleosidase) Length = 269 Score = 41.6 bits (96), Expect = 0.001 Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 2/95 (2%) Frame = -1 Query: 466 RVTRVSKG--CSANVFLDNAEYRQFLRKQFGCTPVEMESAAVALVAHTQGVRFLTIRXXX 293 RV+R+ +G S ++F+ +A+ R + ++FG VEME AA A VA GV F+ IR Sbjct: 158 RVSRLVEGRVASGDLFVSDAQTRARIIREFGAHGVEMEGAAFAHVASVNGVPFVIIRCIS 217 Query: 292 XXXXXXXXXGNEASTFIDIAAKNAVQVMLKFVPLL 188 F AA+ + + L+ + L Sbjct: 218 DGAGAEQDVSMSYKEFSTRAARRSALLTLRVLERL 252
>MTNN_BUCBP (Q89AQ7) MTA/SAH nucleosidase (EC 3.2.2.9) (5'-methylthioadenosine| nucleosidase) (S-adenosylhomocysteine nucleosidase) Length = 252 Score = 38.1 bits (87), Expect = 0.012 Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 1/92 (1%) Frame = -1 Query: 439 SANVFLDNAEYRQFLRKQF-GCTPVEMESAAVALVAHTQGVRFLTIRXXXXXXXXXXXXG 263 S ++F+D E + L+K+F V+ME+AA+A V + + L I+ Sbjct: 155 SGDIFIDTCEKKSLLKKRFPKAIAVDMEAAAIAHVCYQFNIPILIIK--SISDSSDINAA 212 Query: 262 NEASTFIDIAAKNAVQVMLKFVPLLGKSAEEM 167 + FI++A+KN+ V + + L K+ + + Sbjct: 213 DNFKYFINLASKNSSLVTINVLQTLFKNTKNI 244
>BSPB_POPDE (Q09117) Bark storage protein B precursor| Length = 312 Score = 35.0 bits (79), Expect = 0.10 Identities = 17/50 (34%), Positives = 26/50 (52%) Frame = -1 Query: 484 CLPRAPRVTRVSKGCSANVFLDNAEYRQFLRKQFGCTPVEMESAAVALVA 335 CLP P+V SK +++ ++ N Y FL F + SA+VAL + Sbjct: 210 CLPGEPKVVFGSKSSTSDFYVRNKAYGDFLNDNFDAKTADTTSASVALTS 259
>BSPA_POPDE (Q07469) Bark storage protein A precursor| Length = 312 Score = 35.0 bits (79), Expect = 0.10 Identities = 17/50 (34%), Positives = 26/50 (52%) Frame = -1 Query: 484 CLPRAPRVTRVSKGCSANVFLDNAEYRQFLRKQFGCTPVEMESAAVALVA 335 CLP P+V SK +++ ++ N Y FL F + SA+VAL + Sbjct: 210 CLPGKPKVVFGSKSSTSDFYVRNKAYGDFLNDNFDAKTADTASASVALTS 259
>MTNN_HELPY (O24915) MTA/SAH nucleosidase (EC 3.2.2.9) (5'-methylthioadenosine| nucleosidase) (S-adenosylhomocysteine nucleosidase) Length = 231 Score = 34.7 bits (78), Expect = 0.14 Identities = 23/81 (28%), Positives = 36/81 (44%) Frame = -1 Query: 439 SANVFLDNAEYRQFLRKQFGCTPVEMESAAVALVAHTQGVRFLTIRXXXXXXXXXXXXGN 260 S + F+ + E ++FL +F + VEME A+VA V GV +R Sbjct: 150 SGDQFVHSKERKEFLVSEFKASAVEMEGASVAFVCQKFGVPCCVLR------SISDNADE 203 Query: 259 EASTFIDIAAKNAVQVMLKFV 197 EA+ D + + Q KF+ Sbjct: 204 EANMSFDAFLEKSAQTSAKFL 224
>MTNN_HELPJ (Q9ZMY2) MTA/SAH nucleosidase (EC 3.2.2.9) (5'-methylthioadenosine| nucleosidase) (S-adenosylhomocysteine nucleosidase) Length = 230 Score = 32.7 bits (73), Expect = 0.52 Identities = 17/46 (36%), Positives = 26/46 (56%) Frame = -1 Query: 439 SANVFLDNAEYRQFLRKQFGCTPVEMESAAVALVAHTQGVRFLTIR 302 S + F+ + E ++FL +F + VEME A+VA V GV +R Sbjct: 149 SGDQFVHSKERKEFLVSEFKASAVEMEGASVAFVCQKFGVPCCVLR 194
>DEOD_CLOTE (Q894Z3) Purine nucleoside phosphorylase deoD-type (EC 2.4.2.1)| (PNP) Length = 235 Score = 31.6 bits (70), Expect = 1.2 Identities = 16/45 (35%), Positives = 27/45 (60%) Frame = -1 Query: 439 SANVFLDNAEYRQFLRKQFGCTPVEMESAAVALVAHTQGVRFLTI 305 S+++F D+ + ++GC VEME+AA+ +A GV LT+ Sbjct: 155 SSDIFYDDDKEDWKTWAKYGCLGVEMETAALYTIAAKYGVNALTL 199
>PPNK_SYMTH (Q67NC1) Probable inorganic polyphosphate/ATP-NAD kinase (EC| 2.7.1.23) (Poly(P)/ATP NAD kinase) Length = 283 Score = 30.4 bits (67), Expect = 2.6 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = +2 Query: 275 ASPGEVGERADGEEPHPL 328 ASPGEVG ADG +P PL Sbjct: 230 ASPGEVGLSADGSDPFPL 247
>MTNN_MYCTU (P67656) MTA/SAH nucleosidase (EC 3.2.2.9) (5'-methylthioadenosine| nucleosidase) (S-adenosylhomocysteine nucleosidase) Length = 255 Score = 30.0 bits (66), Expect = 3.3 Identities = 19/73 (26%), Positives = 34/73 (46%) Frame = -1 Query: 406 RQFLRKQFGCTPVEMESAAVALVAHTQGVRFLTIRXXXXXXXXXXXXGNEASTFIDIAAK 227 R L + G VEME AVA + + + +L IR + + F+ A Sbjct: 182 RNRLHHELGGMAVEMEGGAVAQICASFDIPWLVIRALSDLAGADSGV--DFNRFVGEVAA 239 Query: 226 NAVQVMLKFVPLL 188 ++ +V+L+ +P+L Sbjct: 240 SSARVLLRLLPVL 252
>MTNN_MYCBO (P67657) MTA/SAH nucleosidase (EC 3.2.2.9) (5'-methylthioadenosine| nucleosidase) (S-adenosylhomocysteine nucleosidase) Length = 255 Score = 30.0 bits (66), Expect = 3.3 Identities = 19/73 (26%), Positives = 34/73 (46%) Frame = -1 Query: 406 RQFLRKQFGCTPVEMESAAVALVAHTQGVRFLTIRXXXXXXXXXXXXGNEASTFIDIAAK 227 R L + G VEME AVA + + + +L IR + + F+ A Sbjct: 182 RNRLHHELGGMAVEMEGGAVAQICASFDIPWLVIRALSDLAGADSGV--DFNRFVGEVAA 239 Query: 226 NAVQVMLKFVPLL 188 ++ +V+L+ +P+L Sbjct: 240 SSARVLLRLLPVL 252
>MTNN_BACSU (O32028) MTA/SAH nucleosidase (EC 3.2.2.9) (5'-methylthioadenosine| nucleosidase) (S-adenosylhomocysteine nucleosidase) Length = 231 Score = 29.6 bits (65), Expect = 4.4 Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 3/90 (3%) Frame = -1 Query: 457 RVSKGCSA--NVFLDNAEYRQFLRKQFG-CTPVEMESAAVALVAHTQGVRFLTIRXXXXX 287 +V+KG A + F+++ + + +R +F VEME+AAVA V H F+ IR Sbjct: 140 QVAKGTIATGDSFMNDPKRVEEVRARFSDLYAVEMEAAAVAQVCHQFKTPFVVIRALSDI 199 Query: 286 XXXXXXXGNEASTFIDIAAKNAVQVMLKFV 197 + F++ AA ++ +++LK + Sbjct: 200 AGKESHVSFD--QFLEQAAVHSTELVLKVI 227
>MTNN_THEMA (Q9X0L3) MTA/SAH nucleosidase (EC 3.2.2.9) (5'-methylthioadenosine| nucleosidase) (S-adenosylhomocysteine nucleosidase) Length = 217 Score = 29.6 bits (65), Expect = 4.4 Identities = 15/46 (32%), Positives = 27/46 (58%) Frame = -1 Query: 439 SANVFLDNAEYRQFLRKQFGCTPVEMESAAVALVAHTQGVRFLTIR 302 S + F+ E + ++++ G V+M+SAAVA V + +FL I+ Sbjct: 134 SGDAFVTVKEKAEEIKRRTGALCVDMDSAAVAKVCYENEKKFLAIK 179
>ARGD_XYLFT (Q87DM8) Acetylornithine aminotransferase (EC 2.6.1.11) (ACOAT)| Length = 411 Score = 28.9 bits (63), Expect = 7.5 Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 6/40 (15%) Frame = -1 Query: 259 EASTFIDIAAKNAVQVM------LKFVPLLGKSAEEMDDG 158 +AS +++AA++ V ++ L+FVP L S EE+ DG Sbjct: 355 QASAILEVAAEHGVLLLQAGPDVLRFVPALNVSDEELADG 394 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,452,939 Number of Sequences: 219361 Number of extensions: 637094 Number of successful extensions: 1884 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 1862 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1884 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3304846491 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
