ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart34f08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|Y13190.1|HVWL5MRNA Hordeum vulgare mRNA for hypothetical pro... 662 0.0
2dbj|AK073265.1| Oryza sativa (japonica cultivar-group) cDNA clon... 389 e-105
3ref|XM_473876.1| Oryza sativa (japonica cultivar-group), predic... 385 e-103
4emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4,... 222 8e-55
5dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 222 8e-55
6gb|AY105797.1| Zea mays PCO117545 mRNA sequence 153 7e-34
7gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chr... 42 1.7
8gb|AC124348.5| Mus musculus BAC clone RP24-462O9 from chromosome... 42 1.7
9ref|XM_570061.1| Cryptococcus neoformans var. neoformans JEC21 h... 42 1.7
10gb|AC132406.4| Mus musculus BAC clone RP23-340E1 from chromosome... 42 1.7
11gb|AC158593.8| Mus musculus 10 BAC RP23-197F5 (Roswell Park Canc... 42 1.7
12dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
13gb|AC078930.13|AC078930 Mus musculus 10 BAC 280B6 (Roswell Park ... 42 1.7
14gb|AC012175.7| Homo sapiens chromosome 16 clone RP11-19H6, compl... 42 1.7
15dbj|AP003251.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
16gb|AC124441.5| Mus musculus BAC clone RP24-176L17 from chromosom... 40 6.7
17emb|AL591463.7| Human DNA sequence from clone RP11-275A6 on chro... 40 6.7
18emb|AL445588.12| Human DNA sequence from clone RP11-522H16 on ch... 40 6.7
19gb|AC108358.3| Homo sapiens X BAC RP11-420H7 (Roswell Park Cance... 40 6.7
20gb|AC108517.3| Homo sapiens BAC clone RP11-622J8 from 4, complet... 40 6.7
21gb|AC106779.3| Homo sapiens chromosome 16 clone RP11-343H19, com... 40 6.7
22gb|AC105269.2| Homo sapiens chromosome 1 clone RP4-788P17, compl... 40 6.7
23dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.7
24gb|AF052191.1|AF052191 Strongylocentrotus purpuratus katanin p60... 40 6.7
25ref|NM_214568.1| Strongylocentrotus purpuratus katanin p60 (katn... 40 6.7
26gb|AC078988.18| Homo sapiens X BAC RP11-169J21 (Roswell Park Can... 40 6.7
27gb|AC112484.8| Homo sapiens 3 BAC RP11-723O4 (Roswell Park Cance... 40 6.7
28gb|AF126079.1|AF126079 Spongiobothrium sp. dev-stage adult 18S s... 40 6.7
29dbj|AP003545.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.7
30emb|CT572983.7| Mouse DNA sequence from clone RP23-110N1 on chro... 40 6.7
31emb|AL713916.13| Mouse DNA sequence from clone RP23-129N3 on chr... 40 6.7 
>emb|Y13190.1|HVWL5MRNA Hordeum vulgare mRNA for hypothetical protein, partial, clone WL5
          Length = 335

 Score =  662 bits (334), Expect = 0.0
 Identities = 334/334 (100%)
 Strand = Plus / Minus

                                                                       
Query: 13  gcttatttcaaaccaattacgttcagcgggttacaaaattcacgtacacaataaagtcgg 72
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 gcttatttcaaaccaattacgttcagcgggttacaaaattcacgtacacaataaagtcgg 275

                                                                       
Query: 73  tgcggagccactgatgacaatactgaagggtggtacatgacataaacgagacagtgacat 132
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 tgcggagccactgatgacaatactgaagggtggtacatgacataaacgagacagtgacat 215

                                                                       
Query: 133 aaaccaaggatggcatcacaatttgctggacggtacacctacaccagaggccctaacctt 192
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 aaaccaaggatggcatcacaatttgctggacggtacacctacaccagaggccctaacctt 155

                                                                       
Query: 193 cttctcgatcacctttgagagctccttcacttcctccttggggatgtggcgagggtgact 252
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 cttctcgatcacctttgagagctccttcacttcctccttggggatgtggcgagggtgact 95

                                                                       
Query: 253 caaccaaagccctccatcgaccaccagcgtagtcccatttacatatttgcctgcatcaga 312
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94  caaccaaagccctccatcgaccaccagcgtagtcccatttacatatttgcctgcatcaga 35

                                             
Query: 313 agcaagatagagcgcggccattgcaatgtcccgt 346
           ||||||||||||||||||||||||||||||||||
Sbjct: 34  agcaagatagagcgcggccattgcaatgtcccgt 1
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>dbj|AK073265.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025B16, full
            insert sequence
          Length = 1364

 Score =  389 bits (196), Expect = e-105
 Identities = 313/352 (88%)
 Strand = Plus / Minus

                                                                        
Query: 146  catcacaatttgctggacggtacacctacaccagaggccctaaccttcttctcgatcacc 205
            |||||||||||||| || || ||||| ||||||||||||||||||||||||||||  |||
Sbjct: 1145 catcacaatttgcttgatggcacaccaacaccagaggccctaaccttcttctcgacaacc 1086

                                                                        
Query: 206  tttgagagctccttcacttcctccttggggatgtggcgagggtgactcaaccaaagccct 265
            |||||||||||||||||||||||||| || || ||||||||| |||| | |||||| |||
Sbjct: 1085 tttgagagctccttcacttcctccttcggaatatggcgagggcgacttagccaaagacct 1026

                                                                        
Query: 266  ccatcgaccaccagcgtagtcccatttacatatttgcctgcatcagaagcaagatagagc 325
            ||||| || ||||  |||||||||||||||||||| ||||||||||||||||| || || 
Sbjct: 1025 ccatcaacaaccactgtagtcccatttacatattttcctgcatcagaagcaaggtaaagt 966

                                                                        
Query: 326  gcggccattgcaatgtcccgtgtctcccccaacttaaataaaggcatcatttcccttttc 385
            || ||||| || ||||||| | | || |||||||||||||||||||| |||||||   ||
Sbjct: 965  gcagccatagctatgtcccatttttcacccaacttaaataaaggcattatttcccgactc 906

                                                                        
Query: 386  cccttgcccatttcatcaggtgcaagcttcctcagtcctggagtgcctccgattggtcct 445
            |||||| ||||||| ||||||||||||||||||| ||||||||||||| | ||||| |||
Sbjct: 905  cccttggccatttcctcaggtgcaagcttcctcattcctggagtgccttcaattggccct 846

                                                                
Query: 446  ggtgcaattccattgaccctgatttcataatctgttccccattccagagcca 497
            ||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 845  ggtgcaattccattgaccctgatgtcataatctgttccccattccagagcca 794
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>ref|XM_473876.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 900

 Score =  385 bits (194), Expect = e-103
 Identities = 311/350 (88%)
 Strand = Plus / Minus

                                                                       
Query: 148 tcacaatttgctggacggtacacctacaccagaggccctaaccttcttctcgatcacctt 207
           |||||||||||| || || ||||| ||||||||||||||||||||||||||||  |||||
Sbjct: 900 tcacaatttgcttgatggcacaccaacaccagaggccctaaccttcttctcgacaacctt 841

                                                                       
Query: 208 tgagagctccttcacttcctccttggggatgtggcgagggtgactcaaccaaagccctcc 267
           |||||||||||||||||||||||| || || ||||||||| |||| | |||||| |||||
Sbjct: 840 tgagagctccttcacttcctccttcggaatatggcgagggcgacttagccaaagacctcc 781

                                                                       
Query: 268 atcgaccaccagcgtagtcccatttacatatttgcctgcatcagaagcaagatagagcgc 327
           ||| || ||||  |||||||||||||||||||| ||||||||||||||||| || || ||
Sbjct: 780 atcaacaaccactgtagtcccatttacatattttcctgcatcagaagcaaggtaaagtgc 721

                                                                       
Query: 328 ggccattgcaatgtcccgtgtctcccccaacttaaataaaggcatcatttcccttttccc 387
            ||||| || ||||||| | | || |||||||||||||||||||| |||||||   ||||
Sbjct: 720 agccatagctatgtcccatttttcacccaacttaaataaaggcattatttcccgactccc 661

                                                                       
Query: 388 cttgcccatttcatcaggtgcaagcttcctcagtcctggagtgcctccgattggtcctgg 447
           |||| ||||||| ||||||||||||||||||| ||||||||||||| | ||||| |||||
Sbjct: 660 cttggccatttcctcaggtgcaagcttcctcattcctggagtgccttcaattggccctgg 601

                                                             
Query: 448 tgcaattccattgaccctgatttcataatctgttccccattccagagcca 497
           ||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 600 tgcaattccattgaccctgatgtcataatctgttccccattccagagcca 551
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>emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070C17,
              complete sequence
          Length = 160484

 Score =  222 bits (112), Expect = 8e-55
 Identities = 175/196 (89%)
 Strand = Plus / Minus

                                                                          
Query: 302    cctgcatcagaagcaagatagagcgcggccattgcaatgtcccgtgtctcccccaactta 361
              ||||||||||||||||| || || || ||||| || ||||||| | | || |||||||||
Sbjct: 156870 cctgcatcagaagcaaggtaaagtgcagccatagctatgtcccatttttcacccaactta 156811

                                                                          
Query: 362    aataaaggcatcatttcccttttccccttgcccatttcatcaggtgcaagcttcctcagt 421
              ||||||||||| |||||||   |||||||| ||||||| ||||||||||||||||||| |
Sbjct: 156810 aataaaggcattatttcccgactccccttggccatttcctcaggtgcaagcttcctcatt 156751

                                                                          
Query: 422    cctggagtgcctccgattggtcctggtgcaattccattgaccctgatttcataatctgtt 481
              |||||||||||| | ||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 156750 cctggagtgccttcaattggccctggtgcaattccattgaccctgatgtcataatctgtt 156691

                              
Query: 482    ccccattccagagcca 497
              ||||||||||||||||
Sbjct: 156690 ccccattccagagcca 156675



 Score =  178 bits (90), Expect = 1e-41
 Identities = 144/162 (88%)
 Strand = Plus / Minus

                                                                          
Query: 146    catcacaatttgctggacggtacacctacaccagaggccctaaccttcttctcgatcacc 205
              |||||||||||||| || || ||||| ||||||||||||||||||||||||||||  |||
Sbjct: 157290 catcacaatttgcttgatggcacaccaacaccagaggccctaaccttcttctcgacaacc 157231

                                                                          
Query: 206    tttgagagctccttcacttcctccttggggatgtggcgagggtgactcaaccaaagccct 265
              |||||||||||||||||||||||||| || || ||||||||| |||| | |||||| |||
Sbjct: 157230 tttgagagctccttcacttcctccttcggaatatggcgagggcgacttagccaaagacct 157171

                                                        
Query: 266    ccatcgaccaccagcgtagtcccatttacatatttgcctgca 307
              ||||| || ||||  |||||||||||||||||||| ||||||
Sbjct: 157170 ccatcaacaaccactgtagtcccatttacatattttcctgca 157129
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  222 bits (112), Expect = 8e-55
 Identities = 175/196 (89%)
 Strand = Plus / Minus

                                                                            
Query: 302      cctgcatcagaagcaagatagagcgcggccattgcaatgtcccgtgtctcccccaactta 361
                ||||||||||||||||| || || || ||||| || ||||||| | | || |||||||||
Sbjct: 31174789 cctgcatcagaagcaaggtaaagtgcagccatagctatgtcccatttttcacccaactta 31174730

                                                                            
Query: 362      aataaaggcatcatttcccttttccccttgcccatttcatcaggtgcaagcttcctcagt 421
                ||||||||||| |||||||   |||||||| ||||||| ||||||||||||||||||| |
Sbjct: 31174729 aataaaggcattatttcccgactccccttggccatttcctcaggtgcaagcttcctcatt 31174670

                                                                            
Query: 422      cctggagtgcctccgattggtcctggtgcaattccattgaccctgatttcataatctgtt 481
                |||||||||||| | ||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 31174669 cctggagtgccttcaattggccctggtgcaattccattgaccctgatgtcataatctgtt 31174610

                                
Query: 482      ccccattccagagcca 497
                ||||||||||||||||
Sbjct: 31174609 ccccattccagagcca 31174594



 Score =  178 bits (90), Expect = 1e-41
 Identities = 144/162 (88%)
 Strand = Plus / Minus

                                                                            
Query: 146      catcacaatttgctggacggtacacctacaccagaggccctaaccttcttctcgatcacc 205
                |||||||||||||| || || ||||| ||||||||||||||||||||||||||||  |||
Sbjct: 31175209 catcacaatttgcttgatggcacaccaacaccagaggccctaaccttcttctcgacaacc 31175150

                                                                            
Query: 206      tttgagagctccttcacttcctccttggggatgtggcgagggtgactcaaccaaagccct 265
                |||||||||||||||||||||||||| || || ||||||||| |||| | |||||| |||
Sbjct: 31175149 tttgagagctccttcacttcctccttcggaatatggcgagggcgacttagccaaagacct 31175090

                                                          
Query: 266      ccatcgaccaccagcgtagtcccatttacatatttgcctgca 307
                ||||| || ||||  |||||||||||||||||||| ||||||
Sbjct: 31175089 ccatcaacaaccactgtagtcccatttacatattttcctgca 31175048
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>gb|AY105797.1| Zea mays PCO117545 mRNA sequence
          Length = 961

 Score =  153 bits (77), Expect = 7e-34
 Identities = 167/197 (84%), Gaps = 2/197 (1%)
 Strand = Plus / Minus

                                                                       
Query: 167 acacctacaccagaggccctaaccttcttctcgatcacctttgagagctccttcacttcc 226
           ||||| ||||||||||||||||| |||||||||| ||| ||  | || ||||| | ||||
Sbjct: 961 acaccaacaccagaggccctaactttcttctcgaccactttcaacagttccttaanttcc 902

                                                                       
Query: 227 tccttggggatgtggcgagggtgactcaaccaaagccctccatcgaccaccagcgtagtc 286
           |||||||| || |||||||||||| | | ||||  |  ||||||||||||||| || |||
Sbjct: 901 tccttgggaatntggcgagggtgatttanccaagac--tccatcgaccaccagtgttgtc 844

                                                                       
Query: 287 ccatttacatatttgcctgcatcagaagcaagatagagcgcggccattgcaatgtcccgt 346
           ||||||||||||||||||||||||||||  || |||||||| |||||||| |||||||| 
Sbjct: 843 ccatttacatatttgcctgcatcagaagtcaggtagagcgcagccattgctatgtcccgc 784

                            
Query: 347 gtctcccccaacttaaa 363
            ||||||| || |||||
Sbjct: 783 ttctccccaaatttaaa 767



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 96/112 (85%)
 Strand = Plus / Minus

                                                                       
Query: 386 cccttgcccatttcatcaggtgcaagcttcctcagtcctggagtgcctccgattggtcct 445
           ||||||| |||||| |||||||||||||||||||| || || ||| ||   |||||||| 
Sbjct: 747 cccttgctcatttcttcaggtgcaagcttcctcagccccggggtgtcttgaattggtcca 688

                                                               
Query: 446 ggtgcaattccattgaccctgatttcataatctgttccccattccagagcca 497
           |||||||| || ||||| || || ||||||||||||||||| ||||||||||
Sbjct: 687 ggtgcaatcccgttgactctaatgtcataatctgttccccactccagagcca 636
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>gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete
               sequence
          Length = 1783081

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 382     tttccccttgcccatttcatc 402
               |||||||||||||||||||||
Sbjct: 1392063 tttccccttgcccatttcatc 1392043
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>gb|AC124348.5| Mus musculus BAC clone RP24-462O9 from chromosome 9, complete sequence
          Length = 187568

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 127    tgacataaaccaaggatggca 147
              |||||||||||||||||||||
Sbjct: 110400 tgacataaaccaaggatggca 110380
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>ref|XM_570061.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
           (CND05100) partial mRNA
          Length = 1112

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 382 tttccccttgcccatttcatc 402
           |||||||||||||||||||||
Sbjct: 601 tttccccttgcccatttcatc 621
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>gb|AC132406.4| Mus musculus BAC clone RP23-340E1 from chromosome 9, complete sequence
          Length = 222617

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 127    tgacataaaccaaggatggca 147
              |||||||||||||||||||||
Sbjct: 155720 tgacataaaccaaggatggca 155740
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>gb|AC158593.8| Mus musculus 10 BAC RP23-197F5 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 216621

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 171    ctacaccagaggccctaacct 191
              |||||||||||||||||||||
Sbjct: 170576 ctacaccagaggccctaacct 170596
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 285      tcccatttacatatttgcctg 305
                |||||||||||||||||||||
Sbjct: 36320795 tcccatttacatatttgcctg 36320775
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>gb|AC078930.13|AC078930 Mus musculus 10 BAC 280B6 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 226168

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 171    ctacaccagaggccctaacct 191
              |||||||||||||||||||||
Sbjct: 173449 ctacaccagaggccctaacct 173469
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>gb|AC012175.7| Homo sapiens chromosome 16 clone RP11-19H6, complete sequence
          Length = 180634

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 379   ccttttccccttgcccatttc 399
             |||||||||||||||||||||
Sbjct: 36741 ccttttccccttgcccatttc 36721
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>dbj|AP003251.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0446B05
          Length = 149145

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 285   tcccatttacatatttgcctg 305
             |||||||||||||||||||||
Sbjct: 70672 tcccatttacatatttgcctg 70652
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>gb|AC124441.5| Mus musculus BAC clone RP24-176L17 from chromosome 18, complete
             sequence
          Length = 190119

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 233   gggatgtggcgagggtgact 252
             ||||||||||||||||||||
Sbjct: 49479 gggatgtggcgagggtgact 49460
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>emb|AL591463.7| Human DNA sequence from clone RP11-275A6 on chromosome 1 Contains the
             3' end of a novel gene and a novel gene, complete sequence
          Length = 186710

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 382   tttccccttgcccatttcat 401
             ||||||||||||||||||||
Sbjct: 44004 tttccccttgcccatttcat 43985
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>emb|AL445588.12| Human DNA sequence from clone RP11-522H16 on chromosome 13, complete
             sequence
          Length = 174591

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 44    tacaaaattcacgtacacaa 63
             ||||||||||||||||||||
Sbjct: 44538 tacaaaattcacgtacacaa 44519
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>gb|AC108358.3| Homo sapiens X BAC RP11-420H7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 43632

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 437   attggtcctggtgcaattcc 456
             ||||||||||||||||||||
Sbjct: 43373 attggtcctggtgcaattcc 43354
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>gb|AC108517.3| Homo sapiens BAC clone RP11-622J8 from 4, complete sequence
          Length = 128233

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 283    agtcccatttacatatttgc 302
              ||||||||||||||||||||
Sbjct: 117426 agtcccatttacatatttgc 117407
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>gb|AC106779.3| Homo sapiens chromosome 16 clone RP11-343H19, complete sequence
          Length = 158297

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 47     aaaattcacgtacacaataa 66
              ||||||||||||||||||||
Sbjct: 126620 aaaattcacgtacacaataa 126601
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>gb|AC105269.2| Homo sapiens chromosome 1 clone RP4-788P17, complete sequence
          Length = 120910

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 382   tttccccttgcccatttcat 401
             ||||||||||||||||||||
Sbjct: 94863 tttccccttgcccatttcat 94844
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 377      tcccttttccccttgcccat 396
                ||||||||||||||||||||
Sbjct: 15395047 tcccttttccccttgcccat 15395066
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>gb|AF052191.1|AF052191 Strongylocentrotus purpuratus katanin p60 subunit mRNA, complete cds
          Length = 1551

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 224  tcctccttggggatgtggcg 243
            ||||||||||||||||||||
Sbjct: 1430 tcctccttggggatgtggcg 1411
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>ref|NM_214568.1| Strongylocentrotus purpuratus katanin p60 (katn), mRNA
          Length = 1551

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 224  tcctccttggggatgtggcg 243
            ||||||||||||||||||||
Sbjct: 1430 tcctccttggggatgtggcg 1411
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>gb|AC078988.18| Homo sapiens X BAC RP11-169J21 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 169849

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 437    attggtcctggtgcaattcc 456
              ||||||||||||||||||||
Sbjct: 168113 attggtcctggtgcaattcc 168132
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>gb|AC112484.8| Homo sapiens 3 BAC RP11-723O4 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 185470

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 225    cctccttggggatgtggcgagggt 248
              ||||| ||||||||||||||||||
Sbjct: 148702 cctccctggggatgtggcgagggt 148725
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>gb|AF126079.1|AF126079 Spongiobothrium sp. dev-stage adult 18S small subunit ribosomal RNA
           gene, partial sequence
          Length = 583

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 173 acaccagaggccctaaccttcttc 196
           ||||||||||||||| ||||||||
Sbjct: 294 acaccagaggccctacccttcttc 271
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>dbj|AP003545.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0613F06
          Length = 184289

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 377   tcccttttccccttgcccat 396
             ||||||||||||||||||||
Sbjct: 62562 tcccttttccccttgcccat 62581
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>emb|CT572983.7| Mouse DNA sequence from clone RP23-110N1 on chromosome 14, complete
              sequence
          Length = 218673

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 368    ggcatcatttcccttttccc 387
              ||||||||||||||||||||
Sbjct: 115001 ggcatcatttcccttttccc 115020
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>emb|AL713916.13| Mouse DNA sequence from clone RP23-129N3 on chromosome 1, complete
             sequence
          Length = 102194

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 3     tactgaacttgcttatttca 22
             ||||||||||||||||||||
Sbjct: 76968 tactgaacttgcttatttca 76987


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,276,549
Number of Sequences: 3902068
Number of extensions: 4276549
Number of successful extensions: 75815
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75704
Number of HSP's gapped (non-prelim): 109
length of query: 497
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 475
effective length of database: 17,147,199,772
effective search space: 8144919891700
effective search space used: 8144919891700
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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