ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart34f07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DEOD_ERWCT (Q6D989) Purine nucleoside phosphorylase deoD-type (E... 29 8.2
2UNC18_CAEEL (P34815) Putative acetylcholine regulator unc-18 (Un... 29 8.2

>DEOD_ERWCT (Q6D989) Purine nucleoside phosphorylase deoD-type (EC 2.4.2.1)|
           (PNP)
          Length = 239

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
 Frame = -2

Query: 498 ACLQKRTEVKLQDLPVVLGACCVLHNICEARGEAMTPELRVEVQDDLPVLD-NPVRSA-D 325
           +C   R +VKL+D+ + +GAC           ++    +R +  D   + D + VR+A D
Sbjct: 91  SCGAVREDVKLRDVVIGMGACT----------DSKVNRMRFKDHDYAAIADFDMVRNAVD 140

Query: 324 AAKARD 307
           AAKARD
Sbjct: 141 AAKARD 146



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>UNC18_CAEEL (P34815) Putative acetylcholine regulator unc-18 (Uncoordinated|
           protein 18)
          Length = 591

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 20/69 (28%), Positives = 34/69 (49%)
 Frame = -2

Query: 450 VLGACCVLHNICEARGEAMTPELRVEVQDDLPVLDNPVRSADAAKARDKMAHNLLHRGLA 271
           +L +CC +HNI E  G  +  +L  + ++ LP L+     A  A++ DK+  +   R L 
Sbjct: 40  MLSSCCKMHNIME-EGITIVEDLN-KRREPLPTLEAIYLIAPTAESIDKLIQDYCARNLY 97

Query: 270 GTAFF*FAD 244
             A   F +
Sbjct: 98  KCAHVFFTE 106


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,985,080
Number of Sequences: 219361
Number of extensions: 745849
Number of successful extensions: 2193
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2193
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3638905326
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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