>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 90/107 (84%)
 Strand = Plus / Minus

                                                                            
Query: 300      ctctagctcaccaactgctggttgccgtaaaacgggtaggctccatacgcaggggcatac 359
                ||||||||||| | ||||||  |||| || |  |||||||||||||| ||||  ||||||
Sbjct: 22393486 ctctagctcactagctgctgactgccatagacagggtaggctccatatgcagcagcatac 22393427

                                                               
Query: 360      atgttggggtgcgggacaggggaggcgtagccgtacccaccatagaa 406
                ||||| ||||||||||| |||||||| || ||||| ||||| |||||
Sbjct: 22393426 atgttagggtgcgggacgggggaggcataaccgtatccaccgtagaa 22393380



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                                  
Query: 248      accggatcaaaaccttgtttcccattggagggagtgggacgaagctctct 297
                |||||| ||||||||||||| |||||||||||| ||| | ||||||||||
Sbjct: 22393549 accggaccaaaaccttgttttccattggagggaatggaatgaagctctct 22393500

>dbj|AK069926.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036B01, full
            insert sequence
          Length = 1632

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 90/107 (84%)
 Strand = Plus / Minus

                                                                        
Query: 300  ctctagctcaccaactgctggttgccgtaaaacgggtaggctccatacgcaggggcatac 359
            ||||||||||| | ||||||  |||| || |  |||||||||||||| ||||  ||||||
Sbjct: 1360 ctctagctcactagctgctgactgccatagacagggtaggctccatatgcagcagcatac 1301

                                                           
Query: 360  atgttggggtgcgggacaggggaggcgtagccgtacccaccatagaa 406
            ||||| ||||||||||| |||||||| || ||||| ||||| |||||
Sbjct: 1300 atgttagggtgcgggacgggggaggcataaccgtatccaccgtagaa 1254



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                              
Query: 248  accggatcaaaaccttgtttcccattggagggagtgggacgaagctctct 297
            |||||| ||||||||||||| |||||||||||| ||| | ||||||||||
Sbjct: 1423 accggaccaaaaccttgttttccattggagggaatggaatgaagctctct 1374

>emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064H22,
              complete sequence
          Length = 147214

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 90/107 (84%)
 Strand = Plus / Minus

                                                                          
Query: 300    ctctagctcaccaactgctggttgccgtaaaacgggtaggctccatacgcaggggcatac 359
              ||||||||||| | ||||||  |||| || |  |||||||||||||| ||||  ||||||
Sbjct: 144392 ctctagctcactagctgctgactgccatagacagggtaggctccatatgcagcagcatac 144333

                                                             
Query: 360    atgttggggtgcgggacaggggaggcgtagccgtacccaccatagaa 406
              ||||| ||||||||||| |||||||| || ||||| ||||| |||||
Sbjct: 144332 atgttagggtgcgggacgggggaggcataaccgtatccaccgtagaa 144286



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                                
Query: 248    accggatcaaaaccttgtttcccattggagggagtgggacgaagctctct 297
              |||||| ||||||||||||| |||||||||||| ||| | ||||||||||
Sbjct: 144455 accggaccaaaaccttgttttccattggagggaatggaatgaagctctct 144406

>dbj|AK122097.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125F07, full
           insert sequence
          Length = 239

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                          
Query: 248 accggatcaaaaccttgtttcccattggagggagtgggacgaagctc 294
           |||||| ||||||||||||| |||||||||||| ||| | |||||||
Sbjct: 47  accggaccaaaaccttgttttccattggagggaatggaatgaagctc 1

>gb|AY109533.1| Zea mays CL775_1 mRNA sequence
          Length = 1689

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 84/103 (81%)
 Strand = Plus / Minus

                                                                        
Query: 304  agctcaccaactgctggttgccgtaaaacgggtaggctccatacgcaggggcatacatgt 363
            ||||||| | ||||||||| || ||  ||||||||||| | || || | ||| |||||||
Sbjct: 1385 agctcactagctgctggttcccatagtacgggtaggcttcgtaggccgcggcgtacatgt 1326

                                                       
Query: 364  tggggtgcgggacaggggaggcgtagccgtacccaccatagaa 406
            | |||||||| |  |||||||||||||| || ||||| |||||
Sbjct: 1325 ttgggtgcggaatcggggaggcgtagccatatccaccgtagaa 1283

>gb|AY104980.1| Zea mays PCO111857 mRNA sequence
          Length = 1651

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 75/92 (81%)
 Strand = Plus / Minus

                                                                        
Query: 300  ctctagctcaccaactgctggttgccgtaaaacgggtaggctccatacgcaggggcatac 359
            ||||||||||| | |||||||||||| || | |||||| |  |||||||| |  || |||
Sbjct: 1336 ctctagctcactagctgctggttgccatatagcgggtacgtgccatacgctgcagcgtac 1277

                                            
Query: 360  atgttggggtgcgggacaggggaggcgtagcc 391
            ||||| ||||| || || |||||||| |||||
Sbjct: 1276 atgtttgggtgtggcaccggggaggcatagcc 1245

>gb|CY005366.1| Influenza A virus (A/ruddy turnstone/DE/97/2000(H12N5)) segment 6,
            complete sequence
          Length = 1469

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 269  ccattggagggagtgggacgaa 290
            ||||||||||||||||||||||
Sbjct: 1030 ccattggagggagtgggacgaa 1051

>ref|XM_466313.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1191

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                     
Query: 314  ctgctggttgccgtaaaacgggtaggctccatacgcaggggcatacatgttggggtg 370
            ||||||||| |||||  | |||||||||||||| || |  ||||||||||| |||||
Sbjct: 1179 ctgctggttaccgtagtaagggtaggctccatatgctgctgcatacatgtttgggtg 1123

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                         
Query: 314      ctgctggttgccgtaaaacgggtaggctccatacgcaggggcatacatgttggggtg 370
                ||||||||| |||||  | |||||||||||||| || |  ||||||||||| |||||
Sbjct: 21621500 ctgctggttaccgtagtaagggtaggctccatatgctgctgcatacatgtttgggtg 21621444

>dbj|AP006068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0020D05
          Length = 158760

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                       
Query: 314    ctgctggttgccgtaaaacgggtaggctccatacgcaggggcatacatgttggggtg 370
              ||||||||| |||||  | |||||||||||||| || |  ||||||||||| |||||
Sbjct: 110450 ctgctggttaccgtagtaagggtaggctccatatgctgctgcatacatgtttgggtg 110394

>dbj|AP006069.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
            clone:P0025F02
          Length = 156545

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                     
Query: 314  ctgctggttgccgtaaaacgggtaggctccatacgcaggggcatacatgttggggtg 370
            ||||||||| |||||  | |||||||||||||| || |  ||||||||||| |||||
Sbjct: 2897 ctgctggttaccgtagtaagggtaggctccatatgctgctgcatacatgtttgggtg 2841

>dbj|AK060161.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-H10, full
           insert sequence
          Length = 1037

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                    
Query: 314 ctgctggttgccgtaaaacgggtaggctccatacgcaggggcatacatgttggggtg 370
           ||||||||| |||||  | |||||||||||||| || |  ||||||||||| |||||
Sbjct: 768 ctgctggttaccgtagtaagggtaggctccatatgctgctgcatacatgtttgggtg 712

>gb|AC135925.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0560C03,
             complete sequence
          Length = 177861

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 293   tctcttgctctagctcacca 312
             ||||||||||||||||||||
Sbjct: 10947 tctcttgctctagctcacca 10966

>gb|AC130725.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0494H05,
             complete sequence
          Length = 141715

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 293   tctcttgctctagctcacca 312
             ||||||||||||||||||||
Sbjct: 86132 tctcttgctctagctcacca 86151

>gb|AC136492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0554F08,
              complete sequence
          Length = 166218

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 293    tctcttgctctagctcacca 312
              ||||||||||||||||||||
Sbjct: 110635 tctcttgctctagctcacca 110654

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 293      tctcttgctctagctcacca 312
                ||||||||||||||||||||
Sbjct: 27079551 tctcttgctctagctcacca 27079570

>emb|BX897729.6| Zebrafish DNA sequence from clone DKEY-240A12 in linkage group 4,
              complete sequence
          Length = 201932

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 126    acagacaccactgtttcttt 145
              ||||||||||||||||||||
Sbjct: 174947 acagacaccactgtttcttt 174928


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,355,719
Number of Sequences: 3902068
Number of extensions: 2355719
Number of successful extensions: 40985
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 40924
Number of HSP's gapped (non-prelim): 61
length of query: 407
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 385
effective length of database: 17,147,199,772
effective search space: 6601671912220
effective search space used: 6601671912220
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)