>DYR1B_MOUSE (Q9Z188) Dual specificity tyrosine-phosphorylation-regulated kinase|
           1B (EC 2.7.12.1)
          Length = 589

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +1

Query: 262 PPSQRCIGSPPNPTNAP 312
           PP  RC+G PP+PT+ P
Sbjct: 503 PPLPRCLGRPPSPTSPP 519

>COAT_PVMR (P17529) Coat protein (Capsid protein) (CP)|
          Length = 304

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 13/50 (26%), Positives = 27/50 (54%)
 Frame = +1

Query: 289 PPNPTNAPLHLMLPSLRTLIISYNFLSAPDRIFVWRNMAASTVPSAYIER 438
           P NP N P    L  ++ + IS N  ++ D + ++ N+    VP+ ++++
Sbjct: 96  PTNPYNRPSIEALSRIKPIAISNNMATSEDMMRIYVNLEGLGVPTEHVQQ 145

>COAT_PVMG (Q01669) Coat protein (Capsid protein) (CP)|
          Length = 304

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 13/50 (26%), Positives = 27/50 (54%)
 Frame = +1

Query: 289 PPNPTNAPLHLMLPSLRTLIISYNFLSAPDRIFVWRNMAASTVPSAYIER 438
           P NP N P    L  ++ + IS N  ++ D + ++ N+    VP+ ++++
Sbjct: 96  PTNPYNRPSIEALSRIKPIAISNNMATSEDMMRIYVNLEGLGVPTEHVQQ 145

>CUBN_MOUSE (Q9JLB4) Cubilin precursor (Intrinsic factor-cobalamin receptor)|
          Length = 3623

 Score = 29.3 bits (64), Expect = 6.9
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = -1

Query: 405 CHVSPHKDTIWGGQEIVRYDQCPEGGQHEMKRGICRVRRRAY 280
           C  +P  DT +G Q   +Y+ C +G Q   K GIC   +R Y
Sbjct: 196 CDCTP--DT-YGPQCASKYNDCEQGSQQLCKHGICEDLQRVY 234

>IFR_PEA (P52576) Isoflavone reductase (EC 1.3.1.45) (IFR)|
           (2'-hydroxyisoflavone reductase) (NADPH:isoflavone
           oxidoreductase)
          Length = 318

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 14/53 (26%), Positives = 23/53 (43%)
 Frame = +1

Query: 292 PNPTNAPLHLMLPSLRTLIISYNFLSAPDRIFVWRNMAASTVPSAYIERPHTL 450
           PN  N  +H+ LP+        N+L+A + I +W      T+   Y+     L
Sbjct: 216 PNTLNKAVHIRLPN--------NYLTANEVIALWEKKIGKTLEKTYVSEEQVL 260

>OXA11_SCHPO (O14300) Inner membrane protein oxa1-1, mitochondrial precursor|
           (Cytochrome oxidase biogenesis protein 1-1) (Sp1)
          Length = 374

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
 Frame = +1

Query: 244 IIHFIRPPSQRCIGSPP-NPTNAPLHLMLPSLRTLIISYNFLSAPDRIFVWRNMAASTVP 420
           ++HF+  PS RC GSP  N T++ L   L S   L     F   P    V   ++ +T  
Sbjct: 1   MLHFLIRPSTRCAGSPHFNSTSSFLRKRLQSKTILSKRLGFQFRPSSTNVLAEVSTATSG 60

Query: 421 SAYIERPHTLCWNSNDTVS 477
                 P+ L  N+  T++
Sbjct: 61  FNPSWWPYALIQNTAYTIN 79


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,202,409
Number of Sequences: 219361
Number of extensions: 1447823
Number of successful extensions: 3397
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3396
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 3970331829
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)